BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007429
(604 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 13/266 (4%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGK---RVGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
W + + + +IG SF VYKGK V ++ LK D R ++ L
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTR 90
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NIL F +N L +VT+ EG S+ L ++ K Q ++I IA A+G+ +L
Sbjct: 91 HVNILLFMGYMTKDN--LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK--SVGEATEYETDGYRWLAPEIIAG 508
+ + +RD+ S I L V +GD G+ T S + E T W+APE+I
Sbjct: 149 HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGL-RPEIP---KDCP 564
++ ++ S+VYS+G+V++E++TGE Y+ + + + G P++ K+CP
Sbjct: 209 Q-DNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCP 267
Query: 565 QILKSLMIKCWNNSPSKRPQFSEIIS 590
+ +K L+ C +RP F +I+S
Sbjct: 268 KAMKRLVADCVKKVKEERPLFPQILS 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 130/261 (49%), Gaps = 14/261 (5%)
Query: 341 NLEFIDQIGPNSFKGVYK----GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNIL 396
+L ++IG SF V++ G V ++ L D E +++ + H NI+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 397 QFYCVCVDENHGLCVVTKLMEGGSVNDLILKS---RKLQTKEIIRIAIDVAEGIKFLNDH 453
F V + L +VT+ + GS+ L+ KS +L + + +A DVA+G+ +L++
Sbjct: 98 LFMG-AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 454 G--VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPE 511
+ +RDL S +L+D+ V + D G+ S ++ W+APE++ +P
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPS 216
Query: 512 SVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLM 571
+ S+VYSFG+++WE+ T + + +P Q + R EIP++ + +++
Sbjct: 217 NEK----SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAII 272
Query: 572 IKCWNNSPSKRPQFSEIISLL 592
CW N P KRP F+ I+ LL
Sbjct: 273 EGCWTNEPWKRPSFATIMDLL 293
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKRV------GIEKLKGCDKGNAYEF-----ELRKDLL 385
L + +E+ QIG F V+KG+ V I+ L D E E ++++
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
+ H NI++ Y + N V+ + G + L+ K+ ++ +R+ +D+A
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 446 GIKFLNDHG--VAYRDLNSQRILL---DRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
GI+++ + + +RDL S I L D + VC T+ +SV + ++W
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGL-LGNFQW 192
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS--PVQAAVGIAACGLRPE 558
+APE I + ES +E ++ YSF M+++ ++TGE + S ++ I GLRP
Sbjct: 193 MAPETIGAEEESYTEK--ADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT 250
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
IP+DCP L++++ CW+ P KRP FS I+ L
Sbjct: 251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 131/261 (50%), Gaps = 14/261 (5%)
Query: 341 NLEFIDQIGPNSFKGVYK----GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNIL 396
+L ++IG SF V++ G V ++ L D E +++ + H NI+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 397 QFYCVCVDENHGLCVVTKLMEGGSVNDLILKS---RKLQTKEIIRIAIDVAEGIKFLNDH 453
F V + L +VT+ + GS+ L+ KS +L + + +A DVA+G+ +L++
Sbjct: 98 LFMG-AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 454 G--VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPE 511
+ +R+L S +L+D+ V + D G+ S +++ W+APE++ +P
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 512 SVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLM 571
+ S+VYSFG+++WE+ T + + +P Q + R EIP++ + +++
Sbjct: 217 NEK----SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAII 272
Query: 572 IKCWNNSPSKRPQFSEIISLL 592
CW N P KRP F+ I+ LL
Sbjct: 273 EGCWTNEPWKRPSFATIMDLL 293
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 27/276 (9%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKRV------GIEKLKGCDKGNAYEF-----ELRKDLL 385
L + +E+ QIG F V+KG+ V I+ L D E E ++++
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
+ H NI++ Y + N V+ + G + L+ K+ ++ +R+ +D+A
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 446 GIKFLNDHG--VAYRDLNSQRILL---DRHGNVC--LGDMGIVTACKSVGEATEYETDGY 498
GI+++ + + +RDL S I L D + VC + D G+ + +SV + +
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL--SQQSVHSVSGL-LGNF 190
Query: 499 RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS--PVQAAVGIAACGLR 556
+W+APE I + ES +E ++ YSF M+++ ++TGE + S ++ I GLR
Sbjct: 191 QWMAPETIGAEEESYTEK--ADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
P IP+DCP L++++ CW+ P KRP FS I+ L
Sbjct: 249 PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%), Gaps = 23/274 (8%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKRV------GIEKLKGCDKGNAYEF-----ELRKDLL 385
L + +E+ QIG F V+KG+ V I+ L D E E ++++
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
+ H NI++ Y + N V+ + G + L+ K+ ++ +R+ +D+A
Sbjct: 76 IMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 446 GIKFLNDHG--VAYRDLNSQRILL---DRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
GI+++ + + +RDL S I L D + VC + +SV + ++W
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL-LGNFQW 192
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS--PVQAAVGIAACGLRPE 558
+APE I + ES +E ++ YSF M+++ ++TGE + S ++ I GLRP
Sbjct: 193 MAPETIGAEEESYTEK--ADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT 250
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
IP+DCP L++++ CW+ P KRP FS I+ L
Sbjct: 251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 25/262 (9%)
Query: 348 IGPNSFKGVYKGKRVGIEKLKGCDKGNAYEF------ELRKDLLELMTCGHKNILQFYCV 401
IG F VY+ +G E + + E +R++ H NI+ V
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 402 CVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVA---YR 458
C+ E + LC+V + GG +N +L +++ ++ A+ +A G+ +L+D + +R
Sbjct: 75 CLKEPN-LCLVMEFARGGPLNR-VLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHR 132
Query: 459 DLNSQRILLDRHGNVCLGDMG-IVTACKSVGEATEYE-------TDGYRWLAPEIIAGDP 510
DL S IL+ + V GD+ + G A E+ Y W+APE+I
Sbjct: 133 DLKSSNILILQ--KVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASM 190
Query: 511 ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
S S+V+S+G+++WE++TGE + + A G+A L IP CP+ L
Sbjct: 191 FSKG----SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKL 246
Query: 571 MIKCWNNSPSKRPQFSEIISLL 592
M CWN P RP F+ I+ L
Sbjct: 247 MEDCWNPDPHSRPSFTNILDQL 268
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 13/266 (4%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDLLELMTCG 391
W + + +IG SF VYKGK G +K + +L + ++ L
Sbjct: 7 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 66
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NIL F L +VT+ EG S+ + L K + K++I IA A G+ +L
Sbjct: 67 HVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL 124
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAG 508
+ + +RDL S I L V +GD G+ T + ++E + W+APE+I
Sbjct: 125 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 184
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIPK---DCP 564
+S ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++ K +CP
Sbjct: 185 Q-DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP 243
Query: 565 QILKSLMIKCWNNSPSKRPQFSEIIS 590
+ +K LM +C +RP F I++
Sbjct: 244 KRMKRLMAECLKKKRDERPSFPRILA 269
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 13/266 (4%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDLLELMTCG 391
W + + +IG SF VYKGK G +K + +L + ++ L
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NIL F L +VT+ EG S+ + L K + K++I IA A G+ +L
Sbjct: 79 HVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAG 508
+ + +RDL S I L V +GD G+ T + ++E + W+APE+I
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIPK---DCP 564
+S ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++ K +CP
Sbjct: 197 Q-DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP 255
Query: 565 QILKSLMIKCWNNSPSKRPQFSEIIS 590
+ +K LM +C +RP F I++
Sbjct: 256 KRMKRLMAECLKKKRDERPSFPRILA 281
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 13/266 (4%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDLLELMTCG 391
W + + +IG SF VYKGK G +K + +L + ++ L
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NIL F L +VT+ EG S+ + L K + K++I IA A G+ +L
Sbjct: 79 HVNILLFMGYSTAPQ--LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAG 508
+ + +RDL S I L V +GD G+ T + ++E + W+APE+I
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIPK---DCP 564
+S ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++ K +CP
Sbjct: 197 Q-DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP 255
Query: 565 QILKSLMIKCWNNSPSKRPQFSEIIS 590
+ +K LM +C +RP F I++
Sbjct: 256 KRMKRLMAECLKKKRDERPSFPRILA 281
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 41/290 (14%)
Query: 342 LEFIDQIGPNSFKGVYKG-----------KRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+ F++++G + F VYKG + V I+ LK +G E E R + +
Sbjct: 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE-EFRHEAMLRARL 86
Query: 391 GHKNILQF---------------YCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKE 435
H N++ YC D + L + + + GS +D L+ +
Sbjct: 87 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 146
Query: 436 IIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET 495
+ + +A G+++L+ H V ++DL ++ +L+ NV + D+G+ + V A Y+
Sbjct: 147 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF---REVYAADYYKL 203
Query: 496 DG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVG 549
G RW+APE I S+ S+++S+G+V+WE+ + G Y S
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSID----SDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 259
Query: 550 IAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNIS 599
I + P P DCP + +LMI+CWN PS+RP+F +I S L N+S
Sbjct: 260 IRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGNLS 308
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 320 DEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGC 370
D QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 30 DPTQTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-- 82
Query: 371 DKGNAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ +
Sbjct: 83 ---VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLR 138
Query: 427 K-SRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K + +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLE 198
Query: 486 SVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y
Sbjct: 199 DDPEAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
S Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 254 MSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 16/274 (5%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDLLELMTCG 391
W + + +IG SF VYKGK G +K + +L + ++ L
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NIL F L +VT+ EG S+ + L + K + ++I IA A+G+ +L
Sbjct: 91 HVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 148
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAG 508
+ + +RDL S I L V +GD G+ T + ++E + W+APE+I
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 208
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIPK---DCP 564
++ ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++ K +CP
Sbjct: 209 QDKN-PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 267
Query: 565 QILKSLMIKCWNNSPSKRPQFSEI---ISLLLRT 595
+ +K LM +C +RP F +I I LL R+
Sbjct: 268 KAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 16/281 (5%)
Query: 328 GGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDL 384
G + W + + +IG SF VYKGK G +K + +L + ++
Sbjct: 1 GSDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 60
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDV 443
L H NIL F L +VT+ EG S+ + L + K + ++I IA
Sbjct: 61 GVLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 118
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWL 501
A+G+ +L+ + +RDL S I L V +GD G+ T + ++E + W+
Sbjct: 119 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIP 560
APE+I ++ ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++
Sbjct: 179 APEVIRMQDKN-PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 237
Query: 561 K---DCPQILKSLMIKCWNNSPSKRPQFSEI---ISLLLRT 595
K +CP+ +K LM +C +RP F +I I LL R+
Sbjct: 238 KVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 278
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 16/274 (5%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDLLELMTCG 391
W + + +IG SF VYKGK G +K + +L + ++ L
Sbjct: 30 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 89
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NIL F L +VT+ EG S+ + L + K + ++I IA A+G+ +L
Sbjct: 90 HVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 147
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAG 508
+ + +RDL S I L V +GD G+ T + ++E + W+APE+I
Sbjct: 148 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 207
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIPK---DCP 564
++ ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++ K +CP
Sbjct: 208 QDKN-PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 266
Query: 565 QILKSLMIKCWNNSPSKRPQFSEI---ISLLLRT 595
+ +K LM +C +RP F +I I LL R+
Sbjct: 267 KAMKRLMAECLKKKRDERPLFPQILASIELLARS 300
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 320 DEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGC 370
D QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 30 DPTQTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-- 82
Query: 371 DKGNAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ +
Sbjct: 83 ---VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLR 138
Query: 427 K-SRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K + +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 486 SVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y
Sbjct: 199 DDPEAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
S Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 254 MSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 320 DEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGC 370
D QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 30 DPTQTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-- 82
Query: 371 DKGNAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ +
Sbjct: 83 ---VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEXMENGSLDSFLR 138
Query: 427 K-SRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K + +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 486 SVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y
Sbjct: 199 DDPEAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
S Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 254 MSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 16/281 (5%)
Query: 328 GGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDL 384
G + W + + +IG SF VYKGK G +K + +L + ++
Sbjct: 1 GSDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 60
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDV 443
L H NIL F L +VT+ EG S+ + L + K + ++I IA
Sbjct: 61 GVLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 118
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWL 501
A+G+ +L+ + +RDL S I L V +GD G+ T + ++E + W+
Sbjct: 119 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIP 560
APE+I ++ ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++
Sbjct: 179 APEVIRMQDKN-PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 237
Query: 561 K---DCPQILKSLMIKCWNNSPSKRPQFSEI---ISLLLRT 595
K +CP+ +K LM +C +RP F +I I LL R+
Sbjct: 238 KVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 278
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 320 DEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGC 370
D QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 30 DPTQTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-- 82
Query: 371 DKGNAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ +
Sbjct: 83 ---VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLR 138
Query: 427 K-SRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K + +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 486 SVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y
Sbjct: 199 DDPEAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
S Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 254 MSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 320 DEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGC 370
D QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 28 DPTQTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-- 80
Query: 371 DKGNAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ +
Sbjct: 81 ---VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLR 136
Query: 427 KS-RKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K + +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 137 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 196
Query: 486 SVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y
Sbjct: 197 DDPEAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWE 251
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
S Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 252 MSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 16/274 (5%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDLLELMTCG 391
W + + +IG SF VYKGK G +K + +L + ++ L
Sbjct: 23 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 82
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NIL F L +VT+ EG S+ + L + K + ++I IA A+G+ +L
Sbjct: 83 HVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 140
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAG 508
+ + +RDL S I L V +GD G+ T + ++E + W+APE+I
Sbjct: 141 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 200
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIPK---DCP 564
++ ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++ K +CP
Sbjct: 201 QDKN-PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 259
Query: 565 QILKSLMIKCWNNSPSKRPQFSEI---ISLLLRT 595
+ +K LM +C +RP F +I I LL R+
Sbjct: 260 KAMKRLMAECLKKKRDERPLFPQILASIELLARS 293
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 320 DEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGC 370
D QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 30 DPTQTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-- 82
Query: 371 DKGNAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ +
Sbjct: 83 ---VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLR 138
Query: 427 K-SRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K + +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 486 SVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y
Sbjct: 199 DDPEAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
S Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 254 MSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 320 DEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGC 370
D QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 30 DPTQTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-- 82
Query: 371 DKGNAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ +
Sbjct: 83 ---VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLR 138
Query: 427 K-SRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K + +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 486 SVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y
Sbjct: 199 DDPEAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
S Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 254 MSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 16/274 (5%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDLLELMTCG 391
W + + +IG SF VYKGK G +K + +L + ++ L
Sbjct: 5 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 64
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NIL F L +VT+ EG S+ + L + K + ++I IA A+G+ +L
Sbjct: 65 HVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 122
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAG 508
+ + +RDL S I L V +GD G+ T + ++E + W+APE+I
Sbjct: 123 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 182
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIPK---DCP 564
++ ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++ K +CP
Sbjct: 183 QDKN-PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 241
Query: 565 QILKSLMIKCWNNSPSKRPQFSEI---ISLLLRT 595
+ +K LM +C +RP F +I I LL R+
Sbjct: 242 KAMKRLMAECLKKKRDERPLFPQILASIELLARS 275
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 320 DEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGC 370
D QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 30 DPTQTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-- 82
Query: 371 DKGNAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ +
Sbjct: 83 ---VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLR 138
Query: 427 K-SRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K + +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 486 SVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y
Sbjct: 199 DDPEAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
S Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 254 MSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 16/274 (5%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDLLELMTCG 391
W + + +IG SF VYKGK G +K + +L + ++ L
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NIL F L +VT+ EG S+ + L + K + ++I IA A+G+ +L
Sbjct: 63 HVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAG 508
+ + +RDL S I L V +GD G+ T + ++E + W+APE+I
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIPK---DCP 564
++ ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++ K +CP
Sbjct: 181 QDKN-PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239
Query: 565 QILKSLMIKCWNNSPSKRPQFSEI---ISLLLRT 595
+ +K LM +C +RP F +I I LL R+
Sbjct: 240 KAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 16/274 (5%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDLLELMTCG 391
W + + +IG SF VYKGK G +K + +L + ++ L
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NIL F L +VT+ EG S+ + L + K + ++I IA A+G+ +L
Sbjct: 91 HVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 148
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAG 508
+ + +RDL S I L V +GD G+ T + ++E + W+APE+I
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 208
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIPK---DCP 564
++ ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++ K +CP
Sbjct: 209 QDKN-PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 267
Query: 565 QILKSLMIKCWNNSPSKRPQFSEI---ISLLLRT 595
+ +K LM +C +RP F +I I LL R+
Sbjct: 268 KAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 17/268 (6%)
Query: 333 GRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDLLELMTC 390
G+W+++ L F+ +IG F V+ G + +K +K +G E + ++ +M
Sbjct: 1 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL 60
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKE-IIRIAIDVAEGIKF 449
H ++Q Y VC+ E +C+VT+ ME G ++D + R L E ++ + +DV EG+ +
Sbjct: 61 SHPKLVQLYGVCL-EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 119
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC----KSVGEATEYETDGYRWLAPEI 505
L + V +RDL ++ L+ + + + D G+ + T++ +W +PE+
Sbjct: 120 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV---KWASPEV 176
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCP 564
+ S S+V+SFG+++WE+ + G+ Y S + I+ G R P+
Sbjct: 177 FSFSRYSSK----SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYKPRLAS 231
Query: 565 QILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ +M CW P RP FS ++ L
Sbjct: 232 THVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 320 DEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGC 370
D QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 30 DPTQTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-- 82
Query: 371 DKGNAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ +
Sbjct: 83 ---VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEXMENGSLDSFLR 138
Query: 427 K-SRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K + +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 486 SVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y
Sbjct: 199 DDPEAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
S Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 254 MSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 16/274 (5%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDLLELMTCG 391
W + + +IG SF VYKGK G +K + +L + ++ L
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NIL F L +VT+ EG S+ + L + K + ++I IA A+G+ +L
Sbjct: 63 HVNILLFMGYSTAPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAG 508
+ + +RDL S I L V +GD G+ T + ++E + W+APE+I
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIPK---DCP 564
++ ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++ K +CP
Sbjct: 181 QDKN-PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239
Query: 565 QILKSLMIKCWNNSPSKRPQFSEI---ISLLLRT 595
+ +K LM +C +RP F +I I LL R+
Sbjct: 240 KAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 36/289 (12%)
Query: 323 QTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGCDKG 373
QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 4 QTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----- 53
Query: 374 NAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILK-S 428
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ + K
Sbjct: 54 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHD 112
Query: 429 RKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG 488
+ +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 113 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 172
Query: 489 EATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSP 543
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y S
Sbjct: 173 EAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
Query: 544 VQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 228 -QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 36/292 (12%)
Query: 320 DEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGC 370
D QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 30 DPTQTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-- 82
Query: 371 DKGNAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ +
Sbjct: 83 ---VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLR 138
Query: 427 KS-RKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K + +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198
Query: 486 SVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y
Sbjct: 199 DDPEAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
S Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 254 MSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 36/289 (12%)
Query: 323 QTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGCDKG 373
QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 21 QTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----- 70
Query: 374 NAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILK-S 428
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ + K
Sbjct: 71 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHD 129
Query: 429 RKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG 488
+ +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 130 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 189
Query: 489 EATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSP 543
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y S
Sbjct: 190 EAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 244
Query: 544 VQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 245 -QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 36/289 (12%)
Query: 323 QTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKGCDKG 373
QTV +E L++ N+ +G F V G+ V I+ LK
Sbjct: 4 QTVHEFAKE-----LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK----- 53
Query: 374 NAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILK-S 428
Y + R+D L E G H NI++ V V ++ + +VT+ ME GS++ + K
Sbjct: 54 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEXMENGSLDSFLRKHD 112
Query: 429 RKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG 488
+ +++ + +A G+K+L+D G +RDL ++ IL++ + + D G+ +
Sbjct: 113 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 172
Query: 489 EATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSP 543
EA Y T G RW +PE IA T S+V+S+G+V+WE+++ GE Y S
Sbjct: 173 EAA-YTTRGGKIPIRWTSPEAIA----YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
Query: 544 VQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
Q + G R P DCP L LM+ CW + RP+F +I+S+L
Sbjct: 228 -QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 16/274 (5%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL---RKDLLELMTCG 391
W + + +IG SF VYKGK G +K + +L + ++ L
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSV-NDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NIL F L +VT+ EG S+ + L + K + ++I IA A+G+ +L
Sbjct: 63 HVNILLFMGYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAG 508
+ + +RDL S I L V +GD G+ T + ++E + W+APE+I
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG-LRPEIPK---DCP 564
++ ++ S+VY+FG+V++E++TG+ Y+ + + + G L P++ K +CP
Sbjct: 181 QDKN-PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239
Query: 565 QILKSLMIKCWNNSPSKRPQFSEI---ISLLLRT 595
+ +K LM +C +RP F +I I LL R+
Sbjct: 240 KAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 129/265 (48%), Gaps = 32/265 (12%)
Query: 348 IGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLLE----LMTCGHK 393
IG F VYKG V I+ LK Y + R D L + H
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKA-----GYTEKQRVDFLGEAGIMGQFSHH 106
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFLND 452
NI++ V + + + ++T+ ME G+++ + K + +++ + +A G+K+L +
Sbjct: 107 NIIRLEGV-ISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 453 HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEIIAG 508
+RDL ++ IL++ + + D G+ + EAT Y T G RW APE I+
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT-YTTSGGKIPIRWTAPEAIS- 223
Query: 509 DPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQIL 567
T S+V+SFG+V+WE++T GE Y S + I G R P DCP +
Sbjct: 224 ---YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND-GFRLPTPMDCPSAI 279
Query: 568 KSLMIKCWNNSPSKRPQFSEIISLL 592
LM++CW ++RP+F++I+S+L
Sbjct: 280 YQLMMQCWQQERARRPKFADIVSIL 304
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 132/283 (46%), Gaps = 41/283 (14%)
Query: 342 LEFIDQIGPNSFKGVYKG-----------KRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+ F++++G + F VYKG + V I+ LK +G E E R + +
Sbjct: 11 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE-EFRHEAMLRARL 69
Query: 391 GHKNILQF---------------YCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKE 435
H N++ YC D + L + + + GS +D L+ +
Sbjct: 70 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 436 IIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET 495
+ + +A G+++L+ H V ++DL ++ +L+ NV + D+G+ + V A Y+
Sbjct: 130 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF---REVYAADYYKL 186
Query: 496 DG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVG 549
G RW+APE I S+ S+++S+G+V+WE+ + G Y S
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSID----SDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 242
Query: 550 IAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
I + P P DCP + +LMI+CWN PS+RP+F +I S L
Sbjct: 243 IRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 126/247 (51%), Gaps = 25/247 (10%)
Query: 359 GKR---VGIEKLKGCDKGNAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCV 411
GKR V I+ LK Y + R+D L E G H NI+ V V ++ + +
Sbjct: 47 GKRELPVAIKTLK-----VGYTEKQRRDFLGEASIMGQFDHPNIIHLEGV-VTKSKPVMI 100
Query: 412 VTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
VT+ ME GS++ + K+ + +++ + ++ G+K+L+D G +RDL ++ IL++ +
Sbjct: 101 VTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSN 160
Query: 471 GNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGM 526
+ D G+ + EA Y T G RW APE IA T S+V+S+G+
Sbjct: 161 LVCKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIAFR----KFTSASDVWSYGI 215
Query: 527 VIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQF 585
V+WE+V+ GE Y + Q + G R P DCP L LM+ CW + RP+F
Sbjct: 216 VMWEVVSYGERPYWEMTN-QDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKF 274
Query: 586 SEIISLL 592
EI+++L
Sbjct: 275 DEIVNML 281
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 130/268 (48%), Gaps = 17/268 (6%)
Query: 333 GRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDLLELMTC 390
G+W+++ L F+ +IG F V+ G + +K +K +G E + ++ +M
Sbjct: 3 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL 62
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKE-IIRIAIDVAEGIKF 449
H ++Q Y VC+ E +C+V + ME G ++D + R L E ++ + +DV EG+ +
Sbjct: 63 SHPKLVQLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 121
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC----KSVGEATEYETDGYRWLAPEI 505
L + V +RDL ++ L+ + + + D G+ + T++ +W +PE+
Sbjct: 122 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV---KWASPEV 178
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCP 564
+ S S+V+SFG+++WE+ + G+ Y S + I+ G R P+
Sbjct: 179 FSFSRYSSK----SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYKPRLAS 233
Query: 565 QILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ +M CW P RP FS ++ L
Sbjct: 234 THVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 23/274 (8%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGV----YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
W LN L+ + IG F V Y+G +V ++ C K +A + +
Sbjct: 188 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVK----CIKNDATAQAFLAEASVMTQL 243
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK---LQTKEIIRIAIDVAEGI 447
H N++Q V V+E GL +VT+ M GS+ D L+SR L +++ ++DV E +
Sbjct: 244 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY-LRSRGRSVLGGDCLLKFSLDVCEAM 302
Query: 448 KFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIA 507
++L + +RDL ++ +L+ + D G+ S + + +W APE +
Sbjct: 303 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALR 359
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI 566
S S+V+SFG+++WE+ + G Y P++ V G + + P CP
Sbjct: 360 EKKFSTK----SDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGYKMDAPDGCPPA 414
Query: 567 LKSLMIKCWNNSPSKRPQFSEIISLL--LRTNNI 598
+ +M CW+ + RP F ++ L +RT+ +
Sbjct: 415 VYDVMKNCWHLDAATRPTFLQLREQLEHIRTHEL 448
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 21/262 (8%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGV----YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
W LN L+ + IG F V Y+G +V ++ C K +A + +
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVK----CIKNDATAQAFLAEASVMTQL 71
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK---LQTKEIIRIAIDVAEGI 447
H N++Q V V+E GL +VT+ M GS+ D L+SR L +++ ++DV E +
Sbjct: 72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD-YLRSRGRSVLGGDCLLKFSLDVCEAM 130
Query: 448 KFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIA 507
++L + +RDL ++ +L+ + D G+ S + + +W APE +
Sbjct: 131 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALR 187
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI 566
S S+V+SFG+++WE+ + G Y P++ V G + + P CP
Sbjct: 188 EKKFSTK----SDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGYKMDAPDGCPPA 242
Query: 567 LKSLMIKCWNNSPSKRPQFSEI 588
+ +M CW+ + RP F ++
Sbjct: 243 VYEVMKNCWHLDAAMRPSFLQL 264
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 21/262 (8%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGV----YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
W LN L+ + IG F V Y+G +V ++ C K +A + +
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVK----CIKNDATAQAFLAEASVMTQL 56
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK---LQTKEIIRIAIDVAEGI 447
H N++Q V V+E GL +VT+ M GS+ D L+SR L +++ ++DV E +
Sbjct: 57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD-YLRSRGRSVLGGDCLLKFSLDVCEAM 115
Query: 448 KFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIA 507
++L + +RDL ++ +L+ + D G+ S + + +W APE +
Sbjct: 116 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALR 172
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI 566
S S+V+SFG+++WE+ + G Y P++ V G + + P CP
Sbjct: 173 EKKFSTK----SDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGYKMDAPDGCPPA 227
Query: 567 LKSLMIKCWNNSPSKRPQFSEI 588
+ +M CW+ + RP F ++
Sbjct: 228 VYEVMKNCWHLDAAMRPSFLQL 249
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 124/262 (47%), Gaps = 21/262 (8%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGV----YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
W LN L+ + IG F V Y+G +V ++ C K +A + +
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVK----CIKNDATAQAFLAEASVMTQL 62
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK---LQTKEIIRIAIDVAEGI 447
H N++Q V V+E GL +VT+ M GS+ D L+SR L +++ ++DV E +
Sbjct: 63 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD-YLRSRGRSVLGGDCLLKFSLDVCEAM 121
Query: 448 KFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIA 507
++L + +RDL ++ +L+ + D G+ S + + +W APE +
Sbjct: 122 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV---KWTAPEALR 178
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI 566
E+ T S+V+SFG+++WE+ + G Y P++ V G + + P CP
Sbjct: 179 ---EAAFST-KSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGYKMDAPDGCPPA 233
Query: 567 LKSLMIKCWNNSPSKRPQFSEI 588
+ +M CW+ + RP F ++
Sbjct: 234 VYEVMKNCWHLDAAMRPSFLQL 255
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 119/241 (49%), Gaps = 22/241 (9%)
Query: 362 VGIEKLKGCDKGNAYEFELRKDLLE----LMTCGHKNILQFYCVCVDENHGLCVVTKLME 417
V I+ LK Y R+D L + H NI++ V V +VT+ ME
Sbjct: 80 VAIKALKA-----GYTERQRRDFLSEASIMGQFDHPNIIRLEGV-VTRGRLAMIVTEYME 133
Query: 418 GGSVNDLILKSR--KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCL 475
GS+ D L++ + +++ + V G+++L+D G +RDL ++ +L+D + +
Sbjct: 134 NGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKV 192
Query: 476 GDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMV 532
D G+ + +A T G RW APE IA S + S+V+SFG+V+WE++
Sbjct: 193 SDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSA----SDVWSFGVVMWEVL 248
Query: 533 T-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISL 591
GE Y + + + G R P CP L LM+ CW+ ++RP+FS+I+S+
Sbjct: 249 AYGERPYWNMTN-RDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV 307
Query: 592 L 592
L
Sbjct: 308 L 308
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 119/241 (49%), Gaps = 22/241 (9%)
Query: 362 VGIEKLKGCDKGNAYEFELRKDLLE----LMTCGHKNILQFYCVCVDENHGLCVVTKLME 417
V I+ LK Y R+D L + H NI++ V V +VT+ ME
Sbjct: 80 VAIKALKA-----GYTERQRRDFLSEASIMGQFDHPNIIRLEGV-VTRGRLAMIVTEYME 133
Query: 418 GGSVNDLILKSR--KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCL 475
GS+ D L++ + +++ + V G+++L+D G +RDL ++ +L+D + +
Sbjct: 134 NGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKV 192
Query: 476 GDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMV 532
D G+ + +A T G RW APE IA S + S+V+SFG+V+WE++
Sbjct: 193 SDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSA----SDVWSFGVVMWEVL 248
Query: 533 T-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISL 591
GE Y + + + G R P CP L LM+ CW+ ++RP+FS+I+S+
Sbjct: 249 AYGERPYWNMTN-RDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV 307
Query: 592 L 592
L
Sbjct: 308 L 308
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 126/259 (48%), Gaps = 25/259 (9%)
Query: 359 GKR---VGIEKLKGCDKGNAYEFELRKDLLE----LMTCGHKNILQFYCVCVDENHGLCV 411
GKR V I+ LK Y + R+D L + H NI+ V V + + +
Sbjct: 54 GKREICVAIKTLKA-----GYTDKQRRDFLSEASIMGQFDHPNIIHLEGV-VTKCKPVMI 107
Query: 412 VTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+T+ ME GS++ + K+ + +++ + + G+K+L+D +RDL ++ IL++ +
Sbjct: 108 ITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSN 167
Query: 471 GNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGM 526
+ D G+ + EA Y T G RW APE IA T S+V+S+G+
Sbjct: 168 LVCKVSDFGMSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIA----YRKFTSASDVWSYGI 222
Query: 527 VIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQF 585
V+WE+++ GE Y S Q + G R P DCP L LM+ CW S RP+F
Sbjct: 223 VMWEVMSYGERPYWDMSN-QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKF 281
Query: 586 SEIISLLLRTNNISNSSNR 604
+I+++L + NS R
Sbjct: 282 GQIVNMLDKLIRNPNSLKR 300
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 136/275 (49%), Gaps = 17/275 (6%)
Query: 327 SGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDL 384
+ G G W ++ +L F+ ++G F V GK G +K +G+ E E ++
Sbjct: 11 TAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEA 70
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDV 443
+M H+ ++Q Y VC + + ++T+ M G + + + + R + QT++++ + DV
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 129
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YR 499
E +++L +RDL ++ L++ G V + D G+ + V + E + G R
Sbjct: 130 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL---SRYVLDDEETSSVGSKFPVR 186
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W PE++ S S++++FG+++WE+ + G+ Y + + A IA GLR
Sbjct: 187 WSPPEVLMYSKFSSK----SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLRLY 241
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLL 593
P + + ++M CW+ +RP F ++S +L
Sbjct: 242 RPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 276
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 126/259 (48%), Gaps = 25/259 (9%)
Query: 359 GKR---VGIEKLKGCDKGNAYEFELRKDLLE----LMTCGHKNILQFYCVCVDENHGLCV 411
GKR V I+ LK Y + R+D L + H NI+ V V + + +
Sbjct: 39 GKREICVAIKTLKA-----GYTDKQRRDFLSEASIMGQFDHPNIIHLEGV-VTKCKPVMI 92
Query: 412 VTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+T+ ME GS++ + K+ + +++ + + G+K+L+D +RDL ++ IL++ +
Sbjct: 93 ITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN 152
Query: 471 GNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGM 526
+ D G+ + EA Y T G RW APE IA T S+V+S+G+
Sbjct: 153 LVCKVSDFGMSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIA----YRKFTSASDVWSYGI 207
Query: 527 VIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQF 585
V+WE+++ GE Y S Q + G R P DCP L LM+ CW S RP+F
Sbjct: 208 VMWEVMSYGERPYWDMSN-QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKF 266
Query: 586 SEIISLLLRTNNISNSSNR 604
+I+++L + NS R
Sbjct: 267 GQIVNMLDKLIRNPNSLKR 285
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 25/275 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKG--CDKGNAYEFELRKDL 384
L+ +L ++++G SF V +G+ V ++ LK + A + + +++
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREV 66
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDV 443
+ + H+N+++ Y V + + +VT+L GS+ D + K + + R A+ V
Sbjct: 67 NAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 124
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGE---ATEYETDGYRW 500
AEG+ +L +RDL ++ +LL V +GD G++ A + E+ + W
Sbjct: 125 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 501 LAPEIIAGDPES-VSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
APE + S S+TWM FG+ +WEM T G+ + + Q I G R
Sbjct: 185 CAPESLKTRTFSHASDTWM-----FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLL 593
P+DCPQ + ++M++CW + P RP F + LL
Sbjct: 240 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 274
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 25/275 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKG--CDKGNAYEFELRKDL 384
L+ +L ++++G SF V +G+ V ++ LK + A + + +++
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREV 72
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDV 443
+ + H+N+++ Y V + + +VT+L GS+ D + K + + R A+ V
Sbjct: 73 NAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 130
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEAT---EYETDGYRW 500
AEG+ +L +RDL ++ +LL V +GD G++ A + E+ + W
Sbjct: 131 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 501 LAPEIIAGDPES-VSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
APE + S S+TWM FG+ +WEM T G+ + + Q I G R
Sbjct: 191 CAPESLKTRTFSHASDTWM-----FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLL 593
P+DCPQ + ++M++CW + P RP F + LL
Sbjct: 246 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 126/259 (48%), Gaps = 25/259 (9%)
Query: 359 GKR---VGIEKLKGCDKGNAYEFELRKDLLE----LMTCGHKNILQFYCVCVDENHGLCV 411
GKR V I+ LK Y + R+D L + H NI+ V V + + +
Sbjct: 33 GKREICVAIKTLKA-----GYTDKQRRDFLSEASIMGQFDHPNIIHLEGV-VTKCKPVMI 86
Query: 412 VTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+T+ ME GS++ + K+ + +++ + + G+K+L+D +RDL ++ IL++ +
Sbjct: 87 ITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN 146
Query: 471 GNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEIIAGDPESVSETWMSNVYSFGM 526
+ D G+ + EA Y T G RW APE IA T S+V+S+G+
Sbjct: 147 LVCKVSDFGMSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIA----YRKFTSASDVWSYGI 201
Query: 527 VIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQF 585
V+WE+++ GE Y S Q + G R P DCP L LM+ CW S RP+F
Sbjct: 202 VMWEVMSYGERPYWDMSN-QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKF 260
Query: 586 SEIISLLLRTNNISNSSNR 604
+I+++L + NS R
Sbjct: 261 GQIVNMLDKLIRNPNSLKR 279
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 25/275 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKG--CDKGNAYEFELRKDL 384
L+ +L ++++G SF V +G+ V ++ LK + A + + +++
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREV 66
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDV 443
+ + H+N+++ Y V + + +VT+L GS+ D + K + + R A+ V
Sbjct: 67 NAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 124
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGE---ATEYETDGYRW 500
AEG+ +L +RDL ++ +LL V +GD G++ A + E+ + W
Sbjct: 125 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 501 LAPEIIAGDPES-VSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
APE + S S+TWM FG+ +WEM T G+ + + Q I G R
Sbjct: 185 CAPESLKTRTFSHASDTWM-----FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLL 593
P+DCPQ + ++M++CW + P RP F + LL
Sbjct: 240 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 274
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 25/275 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKG--CDKGNAYEFELRKDL 384
L+ +L ++++G SF V +G+ V ++ LK + A + + +++
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREV 72
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDV 443
+ + H+N+++ Y V + + +VT+L GS+ D + K + + R A+ V
Sbjct: 73 NAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 130
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGE---ATEYETDGYRW 500
AEG+ +L +RDL ++ +LL V +GD G++ A + E+ + W
Sbjct: 131 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 501 LAPEIIAGDPES-VSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
APE + S S+TWM FG+ +WEM T G+ + + Q I G R
Sbjct: 191 CAPESLKTRTFSHASDTWM-----FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLL 593
P+DCPQ + ++M++CW + P RP F + LL
Sbjct: 246 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 133/269 (49%), Gaps = 26/269 (9%)
Query: 336 LLNSDNLEFIDQIGPNSF----KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
+++ +E + +G +F K ++ K V I++++ + A+ ELR +L
Sbjct: 5 MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELR----QLSRVN 60
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKL---QTKEIIRIAIDVAEGIK 448
H NI++ Y C++ +C+V + EGGS+ +++ + L + + ++G+
Sbjct: 61 HPNIVKLYGACLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 117
Query: 449 FLND---HGVAYRDLNSQRILLDRHGNVC-LGDMGIVTACKSVGEATEYETDGYRWLAPE 504
+L+ + +RDL +LL G V + D G TAC T + W+APE
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG--TACDIQTHMTNNKGSA-AWMAPE 174
Query: 505 IIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS-PVQAAVGIAACGLRPEIPKDC 563
+ G + SE +V+S+G+++WE++T + P + G RP + K+
Sbjct: 175 VFEGS--NYSEK--CDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL 230
Query: 564 PQILKSLMIKCWNNSPSKRPQFSEIISLL 592
P+ ++SLM +CW+ PS+RP EI+ ++
Sbjct: 231 PKPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 25/275 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKG--CDKGNAYEFELRKDL 384
L+ +L ++++G SF V +G+ V ++ LK + A + + +++
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREV 62
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDV 443
+ + H+N+++ Y V + + +VT+L GS+ D + K + + R A+ V
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGE---ATEYETDGYRW 500
AEG+ +L +RDL ++ +LL V +GD G++ A + E+ + W
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 501 LAPEIIAGDPES-VSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
APE + S S+TWM FG+ +WEM T G+ + + Q I G R
Sbjct: 181 CAPESLKTRTFSHASDTWM-----FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLL 593
P+DCPQ + ++M++CW + P RP F + LL
Sbjct: 236 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 133/269 (49%), Gaps = 26/269 (9%)
Query: 336 LLNSDNLEFIDQIGPNSF----KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
+++ +E + +G +F K ++ K V I++++ + A+ ELR +L
Sbjct: 4 MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELR----QLSRVN 59
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKL---QTKEIIRIAIDVAEGIK 448
H NI++ Y C++ +C+V + EGGS+ +++ + L + + ++G+
Sbjct: 60 HPNIVKLYGACLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 449 FLND---HGVAYRDLNSQRILLDRHGNVC-LGDMGIVTACKSVGEATEYETDGYRWLAPE 504
+L+ + +RDL +LL G V + D G TAC T + W+APE
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG--TACDIQTHMTNNKGSA-AWMAPE 173
Query: 505 IIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS-PVQAAVGIAACGLRPEIPKDC 563
+ G + SE +V+S+G+++WE++T + P + G RP + K+
Sbjct: 174 VFEGS--NYSEK--CDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL 229
Query: 564 PQILKSLMIKCWNNSPSKRPQFSEIISLL 592
P+ ++SLM +CW+ PS+RP EI+ ++
Sbjct: 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 25/275 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKG--CDKGNAYEFELRKDL 384
L+ +L ++++G SF V +G+ V ++ LK + A + + +++
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREV 62
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDV 443
+ + H+N+++ Y V + + +VT+L GS+ D + K + + R A+ V
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEAT---EYETDGYRW 500
AEG+ +L +RDL ++ +LL V +GD G++ A + E+ + W
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 501 LAPEIIAGDPES-VSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
APE + S S+TWM FG+ +WEM T G+ + + Q I G R
Sbjct: 181 CAPESLKTRTFSHASDTWM-----FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLL 593
P+DCPQ + ++M++CW + P RP F + LL
Sbjct: 236 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 25/275 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK---------RVGIEKLKG--CDKGNAYEFELRKDL 384
L+ +L ++++G SF V +G+ V ++ LK + A + + +++
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREV 62
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDV 443
+ + H+N+++ Y V + + +VT+L GS+ D + K + + R A+ V
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGE---ATEYETDGYRW 500
AEG+ +L +RDL ++ +LL V +GD G++ A + E+ + W
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 501 LAPEIIAGDPES-VSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
APE + S S+TWM FG+ +WEM T G+ + + Q I G R
Sbjct: 181 CAPESLKTRTFSHASDTWM-----FGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLL 593
P+DCPQ + ++M++CW + P RP F + LL
Sbjct: 236 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 133/277 (48%), Gaps = 21/277 (7%)
Query: 327 SGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDL 384
+ G G W ++ +L F+ ++G F V GK G +K +G+ E E ++
Sbjct: 11 TAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEA 70
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDV 443
+M H+ ++Q Y VC + + ++T+ M G + + + + R + QT++++ + DV
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 129
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC------KSVGEATEYETDG 497
E +++L +RDL ++ L++ G V + D G+ SVG
Sbjct: 130 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP----- 184
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLR 556
RW PE++ S S++++FG+++WE+ + G+ Y + + A IA GLR
Sbjct: 185 VRWSPPEVLMYSKFSSK----SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLR 239
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLL 593
P + + ++M CW+ +RP F ++S +L
Sbjct: 240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 276
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 133/277 (48%), Gaps = 21/277 (7%)
Query: 327 SGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDL 384
+ G G W ++ +L F+ ++G F V GK G +K +G+ E E ++
Sbjct: 2 TAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEA 61
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDV 443
+M H+ ++Q Y VC + + ++T+ M G + + + + R + QT++++ + DV
Sbjct: 62 KVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 120
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC------KSVGEATEYETDG 497
E +++L +RDL ++ L++ G V + D G+ SVG
Sbjct: 121 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP----- 175
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLR 556
RW PE++ S S++++FG+++WE+ + G+ Y + + A IA GLR
Sbjct: 176 VRWSPPEVLMYSKFSSK----SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLR 230
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLL 593
P + + ++M CW+ +RP F ++S +L
Sbjct: 231 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 267
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDLLELMT 389
+G W ++ +L F+ ++G F V GK G +K +G+ E E ++ +M
Sbjct: 1 MGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMN 60
Query: 390 CGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H+ ++Q Y VC + + ++T+ M G + + + + R + QT++++ + DV E ++
Sbjct: 61 LSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 119
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC------KSVGEATEYETDGYRWLA 502
+L +RDL ++ L++ G V + D G+ SVG RW
Sbjct: 120 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-----VRWSP 174
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE++ S S++++FG+++WE+ + G+ Y + + A IA GLR P
Sbjct: 175 PEVLMYSKFSSK----SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLRLYRPH 229
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLLL 593
+ + ++M CW+ +RP F ++S +L
Sbjct: 230 LASEKVYTIMYSCWHEKADERPTFKILLSNIL 261
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 131/267 (49%), Gaps = 13/267 (4%)
Query: 333 GRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDLLELMTC 390
G W ++ +L F+ ++G F V GK G +K +G+ E E ++ +M
Sbjct: 2 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL 61
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKF 449
H+ ++Q Y VC + + ++T+ M G + + + + R + QT++++ + DV E +++
Sbjct: 62 SHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEIIA 507
L +RDL ++ L++ G V + D G+ E T + RW PE++
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSRGSKFPVRWSPPEVLM 179
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI 566
S S++++FG+++WE+ + G+ Y + + A IA GLR P +
Sbjct: 180 YSKFSSK----SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLRLYRPHLASEK 234
Query: 567 LKSLMIKCWNNSPSKRPQFSEIISLLL 593
+ ++M CW+ +RP F ++S +L
Sbjct: 235 VYTIMYSCWHEKADERPTFKILLSNIL 261
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 333 GRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDLLELMTC 390
G W ++ +L F+ ++G F V GK G +K +G+ E E ++ +M
Sbjct: 1 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL 60
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKF 449
H+ ++Q Y VC + + ++T+ M G + + + + R + QT++++ + DV E +++
Sbjct: 61 SHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC------KSVGEATEYETDGYRWLAP 503
L +RDL ++ L++ G V + D G+ SVG RW P
Sbjct: 120 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-----VRWSPP 174
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKD 562
E++ S S++++FG+++WE+ + G+ Y + + A IA GLR P
Sbjct: 175 EVLMYSKFSSK----SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLRLYRPHL 229
Query: 563 CPQILKSLMIKCWNNSPSKRPQFSEIISLLL 593
+ + ++M CW+ +RP F ++S +L
Sbjct: 230 ASEKVYTIMYSCWHEKADERPTFKILLSNIL 260
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 17/265 (6%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDLLELMTCGHK 393
+++ L F+ +IG F V+ G + +K +K +G E + ++ +M H
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP 62
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKE-IIRIAIDVAEGIKFLND 452
++Q Y VC+ E +C+V + ME G ++D + R L E ++ + +DV EG+ +L +
Sbjct: 63 KLVQLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 453 HGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC----KSVGEATEYETDGYRWLAPEIIAG 508
V +RDL ++ L+ + + + D G+ + T++ +W +PE+ +
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV---KWASPEVFSF 178
Query: 509 DPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQIL 567
S S+V+SFG+++WE+ + G+ Y S + I+ G R P+ +
Sbjct: 179 SRYSSK----SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYKPRLASTHV 233
Query: 568 KSLMIKCWNNSPSKRPQFSEIISLL 592
+M CW P RP FS ++ L
Sbjct: 234 YQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 23/256 (8%)
Query: 359 GKR---VGIEKLKGCDKGNAYEFELRKDLL-ELMTCG---HKNILQFYCVCVDENHGLCV 411
GKR V I+ LK Y + R+D L E G H N++ V V + +
Sbjct: 68 GKRDVAVAIKTLK-----VGYTEKQRRDFLCEASIMGQFDHPNVVHLEGV-VTRGKPVMI 121
Query: 412 VTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
V + ME G+++ + K + +++ + +A G+++L D G +RDL ++ IL++ +
Sbjct: 122 VIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSN 181
Query: 471 GNVCLGDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMV 527
+ D G+ + EA T G RW APE I + T S+V+S+G+V
Sbjct: 182 LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI----QYRKFTSASDVWSYGIV 237
Query: 528 IWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+WE+++ GE Y S Q + G R P DCP L LM+ CW ++RP+F
Sbjct: 238 MWEVMSYGERPYWDMSN-QDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFE 296
Query: 587 EIISLLLRTNNISNSS 602
+I+ +L + NS+
Sbjct: 297 QIVGILDKMIRNPNSA 312
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 138/311 (44%), Gaps = 54/311 (17%)
Query: 310 LPSSSFVVSVDEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK--------- 360
PSS FV DEW+ ++ + + + ++G SF VY+G
Sbjct: 2 FPSSVFVP--DEWE-------------VSREKITLLRELGQGSFGMVYEGNARDIIKGEA 46
Query: 361 --RVGIEKL-KGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLME 417
RV ++ + + EF +++ TC H +++ V V + VV +LM
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--VVRLLGV-VSKGQPTLVVMELMA 103
Query: 418 GGSVNDLILKSRK----------LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILL 467
G + + R +E+I++A ++A+G+ +LN +RDL ++ ++
Sbjct: 104 HGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 163
Query: 468 DRHGNVCLGDMGIVTACKSVGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVY 522
V +GD G+ + + E Y G RW+APE + + S S+++
Sbjct: 164 AHDFTVKIGDFGM---TRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTS----SDMW 216
Query: 523 SFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSK 581
SFG+V+WE+ + E Y S Q + G + P +CP+ + LM CW +P
Sbjct: 217 SFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKM 275
Query: 582 RPQFSEIISLL 592
RP F EI++LL
Sbjct: 276 RPTFLEIVNLL 286
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 128/265 (48%), Gaps = 17/265 (6%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDLLELMTCGHK 393
+++ L F+ +IG F V+ G + +K +K +G+ E + ++ +M H
Sbjct: 23 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHP 82
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKE-IIRIAIDVAEGIKFLND 452
++Q Y VC+ E +C+V + ME G ++D + R L E ++ + +DV EG+ +L +
Sbjct: 83 KLVQLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 141
Query: 453 HGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC----KSVGEATEYETDGYRWLAPEIIAG 508
V +RDL ++ L+ + + + D G+ + T++ +W +PE+ +
Sbjct: 142 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV---KWASPEVFSF 198
Query: 509 DPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQIL 567
S S+V+SFG+++WE+ + G+ Y S + I+ G R P+ +
Sbjct: 199 SRYSSK----SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYKPRLASTHV 253
Query: 568 KSLMIKCWNNSPSKRPQFSEIISLL 592
+M CW P RP FS ++ L
Sbjct: 254 YQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 64/316 (20%)
Query: 310 LPSSSFVVSVDEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK--------- 360
PSS FV DEW+ ++ + + + ++G SF VY+G
Sbjct: 2 FPSSVFVP--DEWE-------------VSREKITLLRELGQGSFGMVYEGNARDIIKGEA 46
Query: 361 --RVGIEKL-KGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLME 417
RV ++ + + EF +++ TC H +++ V V + VV +LM
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--VVRLLGV-VSKGQPTLVVMELMA 103
Query: 418 GGSVNDLILKSRK----------LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILL 467
G + + R +E+I++A ++A+G+ +LN +RDL ++ ++
Sbjct: 104 HGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 163
Query: 468 DRHGNVCLGDMGIVTACKSVGEATEYETDGYR----------WLAPEIIAGDPESVSETW 517
V +GD G+ YETD YR W+APE + + S
Sbjct: 164 AHDFTVKIGDFGMTRDI--------YETDYYRKGGKGLLPVRWMAPESLKDGVFTTS--- 212
Query: 518 MSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWN 576
S+++SFG+V+WE+ + E Y S Q + G + P +CP+ + LM CW
Sbjct: 213 -SDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQ 270
Query: 577 NSPSKRPQFSEIISLL 592
+P RP F EI++LL
Sbjct: 271 FNPKMRPTFLEIVNLL 286
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 21/268 (7%)
Query: 333 GRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKL--KGCDKGNAYEFELRKDLLELMTC 390
G L + + + ++G F V GK G + K +G+ E E ++ +M
Sbjct: 1 GHMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL 60
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGS-VNDLILKSRKLQTKEIIRIAIDVAEGIKF 449
H +++FY VC E + + +VT+ + G +N L + L+ +++ + DV EG+ F
Sbjct: 61 SHPKLVKFYGVCSKE-YPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAF 119
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV------TACKSVGEATEYETDGYRWLAP 503
L H +RDL ++ L+DR V + D G+ SVG T++ +W AP
Sbjct: 120 LESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG--TKFPV---KWSAP 174
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKD 562
E+ S S+V++FG+++WE+ + G+ Y + + + ++ G R P
Sbjct: 175 EVFHYFKYSSK----SDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ-GHRLYRPHL 229
Query: 563 CPQILKSLMIKCWNNSPSKRPQFSEIIS 590
+ +M CW+ P KRP F +++S
Sbjct: 230 ASDTIYQIMYSCWHELPEKRPTFQQLLS 257
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 15/260 (5%)
Query: 342 LEFIDQIGPNS----FKGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQ 397
L F+ ++ N +KG ++G + ++ LK D + ++ L H N+L
Sbjct: 12 LNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 398 FYCVCVDEN-HGLCVVTKLMEGGSVNDLILKSRKL--QTKEIIRIAIDVAEGIKFLN--D 452
C ++T M GS+ +++ + + ++ A+D+A G+ FL+ +
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE 131
Query: 453 HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPES 512
+ LNS+ +++D + + + +S G W+APE + PE
Sbjct: 132 PLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMY-----APAWVAPEALQKKPED 186
Query: 513 VSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMI 572
+ ++++SF +++WE+VT E +A S ++ + +A GLRP IP + LM
Sbjct: 187 TNRR-SADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMK 245
Query: 573 KCWNNSPSKRPQFSEIISLL 592
C N P+KRP+F I+ +L
Sbjct: 246 ICMNEDPAKRPKFDMIVPIL 265
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 17/265 (6%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDLLELMTCGHK 393
+++ L F+ +IG F V+ G + +K +K +G E + ++ +M H
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP 62
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKE-IIRIAIDVAEGIKFLND 452
++Q Y VC+ E +C+V + ME G ++D + R L E ++ + +DV EG+ +L +
Sbjct: 63 KLVQLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 453 HGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC----KSVGEATEYETDGYRWLAPEIIAG 508
V +RDL ++ L+ + + + D G+ + T++ +W +PE+ +
Sbjct: 122 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV---KWASPEVFSF 178
Query: 509 DPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQIL 567
S S+V+SFG+++WE+ + G+ Y S + I+ G R P+ +
Sbjct: 179 SRYSSK----SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYKPRLASTHV 233
Query: 568 KSLMIKCWNNSPSKRPQFSEIISLL 592
+M CW P RP FS ++ L
Sbjct: 234 YQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 17/265 (6%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDLLELMTCGHK 393
+++ L F+ +IG F V+ G + +K +K +G E + ++ +M H
Sbjct: 1 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHP 60
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKE-IIRIAIDVAEGIKFLND 452
++Q Y VC+ E +C+V + ME G ++D + R L E ++ + +DV EG+ +L +
Sbjct: 61 KLVQLYGVCL-EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 453 HGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC----KSVGEATEYETDGYRWLAPEIIAG 508
V +RDL ++ L+ + + + D G+ + T++ +W +PE+ +
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV---KWASPEVFSF 176
Query: 509 DPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQIL 567
S S+V+SFG+++WE+ + G+ Y S + I+ G R P+ +
Sbjct: 177 SRYSSK----SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYKPRLASTHV 231
Query: 568 KSLMIKCWNNSPSKRPQFSEIISLL 592
+M CW P RP FS ++ L
Sbjct: 232 YQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 14 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 71
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 72 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 126 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTA 184
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 185 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 239
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 240 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 16 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 73
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 74 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 127
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 128 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTA 186
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 187 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 241
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 242 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 272
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 17 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 74
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 75 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 128
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 129 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTA 187
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 188 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 242
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 243 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 273
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 18 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 75
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 76 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 129
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 130 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTA 188
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 189 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 243
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 244 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 274
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 10 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 67
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 68 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 121
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 122 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTA 180
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 181 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 235
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 236 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 266
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 14 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 71
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 72 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 126 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTA 184
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 185 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 239
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 240 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 65
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 66 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTA 178
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 179 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 233
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 65
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 66 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTA 178
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 179 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 233
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 9 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 66
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 67 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 120
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 121 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTA 179
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 180 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 234
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 235 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 265
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 13 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 70
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 71 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 124
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 125 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTA 183
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 184 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 238
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 239 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 269
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 3 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 60
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 61 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 114
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 115 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTA 173
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 174 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 228
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 229 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 259
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 65
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 66 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTA 178
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 179 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 233
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 49/289 (16%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY----EFELRK 382
W + + + ++G SF VY+G G+ K +K ++ + EF
Sbjct: 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTK-------- 434
+++ C H +++ V V + V+ +LM G + + R
Sbjct: 80 SVMKEFNCHH--VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 435 --EIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATE 492
++I++A ++A+G+ +LN + +RDL ++ ++ V +GD G+
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-------- 188
Query: 493 YETDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAAC 541
YETD YR W++PE + + V T+ S+V+SFG+V+WE+ T E Y
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLK---DGVFTTY-SDVWSFGVVLWEIATLAEQPYQGL 244
Query: 542 SPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
S Q + GL + P +CP +L LM CW +P RP F EIIS
Sbjct: 245 SNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 49/289 (16%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY----EFELRK 382
W + + + ++G SF VY+G G+ K +K ++ + EF
Sbjct: 10 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 69
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTK-------- 434
+++ C H +++ V V + V+ +LM G + + R
Sbjct: 70 SVMKEFNCHH--VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 435 --EIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATE 492
++I++A ++A+G+ +LN + +RDL ++ ++ V +GD G+
Sbjct: 127 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-------- 178
Query: 493 YETDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAAC 541
YETD YR W++PE + + V T+ S+V+SFG+V+WE+ T E Y
Sbjct: 179 YETDYYRKGGKGLLPVRWMSPESLK---DGVFTTY-SDVWSFGVVLWEIATLAEQPYQGL 234
Query: 542 SPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
S Q + GL + P +CP +L LM CW +P RP F EIIS
Sbjct: 235 SNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 282
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 123/266 (46%), Gaps = 17/266 (6%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDLLELMTCGH 392
W + ++L+ I ++G F V+ G G K +K G ++ + H
Sbjct: 4 WEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKH 63
Query: 393 KNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKEIIRIAIDVAEGIKFL 450
++Q Y V +E + +VT+ M GS+ D + + R L+ ++ +A VA G+ ++
Sbjct: 64 DKLVQLYAVVSEEP--IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI 121
Query: 451 NDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTACKSVGEATEYETDGY--RWLAPEIIA 507
+RDL S IL+ +G +C + D G+ + E T + + +W APE
Sbjct: 122 ERMNYIHRDLRSANILVG-NGLICKIADFGLARLIED-NEXTARQGAKFPIKWTAPEAAL 179
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI 566
++ S+V+SFG+++ E+VT G Y + + + G R P+DCP
Sbjct: 180 YGRFTIK----SDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER-GYRMPCPQDCPIS 234
Query: 567 LKSLMIKCWNNSPSKRPQFSEIISLL 592
L LMI CW P +RP F + S L
Sbjct: 235 LHELMIHCWKKDPEERPTFEYLQSFL 260
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 53/291 (18%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY----EFELRK 382
W + + + ++G SF VY+G G+ K +K ++ + EF
Sbjct: 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV------------NDLILKSRK 430
+++ C H +++ V V + V+ +LM G + N+ +L
Sbjct: 80 SVMKEFNCHH--VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 136
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L ++I++A ++A+G+ +LN + +RDL ++ ++ V +GD G+
Sbjct: 137 LS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------ 188
Query: 491 TEYETDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYA 539
YETD YR W++PE + + V T+ S+V+SFG+V+WE+ T E Y
Sbjct: 189 --YETDYYRKGGKGLLPVRWMSPESLK---DGVFTTY-SDVWSFGVVLWEIATLAEQPYQ 242
Query: 540 ACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
S Q + GL + P +CP +L LM CW +P RP F EIIS
Sbjct: 243 GLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 53/291 (18%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY----EFELRK 382
W + + + ++G SF VY+G G+ K +K ++ + EF
Sbjct: 13 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV------------NDLILKSRK 430
+++ C H +++ V V + V+ +LM G + N+ +L
Sbjct: 73 SVMKEFNCHH--VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L ++I++A ++A+G+ +LN + +RDL ++ ++ V +GD G+
Sbjct: 130 LS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------ 181
Query: 491 TEYETDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYA 539
YETD YR W++PE + + V T+ S+V+SFG+V+WE+ T E Y
Sbjct: 182 --YETDYYRKGGKGLLPVRWMSPESLK---DGVFTTY-SDVWSFGVVLWEIATLAEQPYQ 235
Query: 540 ACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
S Q + GL + P +CP +L LM CW +P RP F EIIS
Sbjct: 236 GLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 285
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 53/291 (18%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY----EFELRK 382
W + + + ++G SF VY+G G+ K +K ++ + EF
Sbjct: 11 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 70
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV------------NDLILKSRK 430
+++ C H +++ V V + V+ +LM G + N+ +L
Sbjct: 71 SVMKEFNCHH--VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 127
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L ++I++A ++A+G+ +LN + +RDL ++ ++ V +GD G+
Sbjct: 128 LS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------ 179
Query: 491 TEYETDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYA 539
YETD YR W++PE + + V T+ S+V+SFG+V+WE+ T E Y
Sbjct: 180 --YETDYYRKGGKGLLPVRWMSPESLK---DGVFTTY-SDVWSFGVVLWEIATLAEQPYQ 233
Query: 540 ACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
S Q + GL + P +CP +L LM CW +P RP F EIIS
Sbjct: 234 GLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 283
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 53/291 (18%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY----EFELRK 382
W + + + ++G SF VY+G G+ K +K ++ + EF
Sbjct: 13 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV------------NDLILKSRK 430
+++ C H +++ V V + V+ +LM G + N+ +L
Sbjct: 73 SVMKEFNCHH--VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L ++I++A ++A+G+ +LN + +RDL ++ ++ V +GD G+
Sbjct: 130 LS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------ 181
Query: 491 TEYETDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYA 539
YETD YR W++PE + + V T+ S+V+SFG+V+WE+ T E Y
Sbjct: 182 --YETDYYRKGGKGLLPVRWMSPESLK---DGVFTTY-SDVWSFGVVLWEIATLAEQPYQ 235
Query: 540 ACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
S Q + GL + P +CP +L LM CW +P RP F EIIS
Sbjct: 236 GLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 285
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 53/291 (18%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY----EFELRK 382
W + + + ++G SF VY+G G+ K +K ++ + EF
Sbjct: 7 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV------------NDLILKSRK 430
+++ C H +++ V V + V+ +LM G + N+ +L
Sbjct: 67 SVMKEFNCHH--VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L ++I++A ++A+G+ +LN + +RDL ++ ++ V +GD G+
Sbjct: 124 LS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------ 175
Query: 491 TEYETDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYA 539
YETD YR W++PE + + V T+ S+V+SFG+V+WE+ T E Y
Sbjct: 176 --YETDYYRKGGKGLLPVRWMSPESLK---DGVFTTY-SDVWSFGVVLWEIATLAEQPYQ 229
Query: 540 ACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
S Q + GL + P +CP +L LM CW +P RP F EIIS
Sbjct: 230 GLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 279
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 49/291 (16%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRK 382
W ++ + + + ++G SF VY+G RV ++ + + EF
Sbjct: 13 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA 72
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK----------LQ 432
+++ TC H +++ V V + VV +LM G + + R
Sbjct: 73 SVMKGFTCHH--VVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 129
Query: 433 TKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATE 492
+E+I++A ++A+G+ +LN +R+L ++ ++ V +GD G+
Sbjct: 130 LQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-------- 181
Query: 493 YETDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAAC 541
YETD YR W+APE + + S S+++SFG+V+WE+ + E Y
Sbjct: 182 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTS----SDMWSFGVVLWEITSLAEQPYQGL 237
Query: 542 SPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
S Q + G + P +CP+ + LM CW +P+ RP F EI++LL
Sbjct: 238 SNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 49/291 (16%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRK 382
W ++ + + + ++G SF VY+G RV ++ + + EF
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA 71
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK----------LQ 432
+++ TC H +++ V V + VV +LM G + + R
Sbjct: 72 SVMKGFTCHH--VVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 433 TKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATE 492
+E+I++A ++A+G+ +LN +R+L ++ ++ V +GD G+
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-------- 180
Query: 493 YETDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAAC 541
YETD YR W+APE + + S S+++SFG+V+WE+ + E Y
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTS----SDMWSFGVVLWEITSLAEQPYQGL 236
Query: 542 SPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
S Q + G + P +CP+ + LM CW +P+ RP F EI++LL
Sbjct: 237 SNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 53/291 (18%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY----EFELRK 382
W + + + ++G SF VY+G G+ K +K ++ + EF
Sbjct: 14 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV------------NDLILKSRK 430
+++ C H +++ V V + V+ +LM G + N+ +L
Sbjct: 74 SVMKEFNCHH--VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L ++I++A ++A+G+ +LN + +RDL ++ ++ V +GD G+
Sbjct: 131 LS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------ 182
Query: 491 TEYETDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYA 539
YETD YR W++PE + + V T+ S+V+SFG+V+WE+ T E Y
Sbjct: 183 --YETDYYRKGGKGLLPVRWMSPESLK---DGVFTTY-SDVWSFGVVLWEIATLAEQPYQ 236
Query: 540 ACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
S Q + GL + P +CP +L LM CW +P RP F EIIS
Sbjct: 237 GLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 286
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 53/291 (18%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY----EFELRK 382
W + + + ++G SF VY+G G+ K +K ++ + EF
Sbjct: 42 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 101
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV------------NDLILKSRK 430
+++ C H +++ V V + V+ +LM G + N+ +L
Sbjct: 102 SVMKEFNCHH--VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 158
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L ++I++A ++A+G+ +LN + +RDL ++ ++ V +GD G+
Sbjct: 159 LS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI------ 210
Query: 491 TEYETDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYA 539
YETD YR W++PE + + V T+ S+V+SFG+V+WE+ T E Y
Sbjct: 211 --YETDYYRKGGKGLLPVRWMSPESLK---DGVFTTY-SDVWSFGVVLWEIATLAEQPYQ 264
Query: 540 ACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
S Q + GL + P +CP +L LM CW +P RP F EIIS
Sbjct: 265 GLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 314
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 137/311 (44%), Gaps = 54/311 (17%)
Query: 310 LPSSSFVVSVDEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK--------- 360
PSS FV DEW+ ++ + + + ++G SF VY+G
Sbjct: 2 FPSSVFVP--DEWE-------------VSREKITLLRELGQGSFGMVYEGNARDIIKGEA 46
Query: 361 --RVGIEKL-KGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLME 417
RV ++ + + EF +++ TC H +++ V V + VV +LM
Sbjct: 47 ETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--VVRLLGV-VSKGQPTLVVMELMA 103
Query: 418 GGSVNDLILKSRK----------LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILL 467
G + + R +E+I++A ++A+G+ +LN +RDL ++ ++
Sbjct: 104 HGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 163
Query: 468 DRHGNVCLGDMGIVTACKSVGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVY 522
V +GD G+ + + E G RW+APE + + S S+++
Sbjct: 164 AHDFTVKIGDFGM---TRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTS----SDMW 216
Query: 523 SFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSK 581
SFG+V+WE+ + E Y S Q + G + P +CP+ + LM CW +P
Sbjct: 217 SFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKM 275
Query: 582 RPQFSEIISLL 592
RP F EI++LL
Sbjct: 276 RPTFLEIVNLL 286
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNS----FKGVYKGK-RVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G + G Y G +V ++ LK G +A+ E L K L
Sbjct: 8 WEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 65
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 66 ----QHQRLVRLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +RDL + IL+ + + D G+ + E T E + +W A
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-AEXTAREGAKFPIKWTA 178
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 179 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 233
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + + L+ ++++G F V+ G +V ++ LK G +A+ E L K L
Sbjct: 4 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-- 61
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVA 444
H+ +++ Y V E + ++T+ ME GS+ D + KL +++ +A +A
Sbjct: 62 ----QHQRLVRLYAVVTQE--PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 115
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
EG+ F+ + +R+L + IL+ + + D G+ + E T E + +W A
Sbjct: 116 EGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTA 174
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE I ++ S+V+SFG+++ E+VT G Y + + + G R P
Sbjct: 175 PEAINYGTFTIK----SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPD 229
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM CW P RP F + S+L
Sbjct: 230 NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 260
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 129/267 (48%), Gaps = 21/267 (7%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--LKGCDKGNAYEFELRKDLLELMTCGHKN 394
++ +L F+ ++G F V GK G +K +G+ E E ++ +M H+
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK 60
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKFLNDH 453
++Q Y VC + + ++T+ M G + + + + R + QT++++ + DV E +++L
Sbjct: 61 LVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIVTAC------KSVGEATEYETDGYRWLAPEIIA 507
+RDL ++ L++ G V + D G+ SVG RW PE++
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-----VRWSPPEVLM 174
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI 566
S S++++FG+++WE+ + G+ Y + + A IA GLR P +
Sbjct: 175 YSKFSSK----SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLRLYRPHLASEK 229
Query: 567 LKSLMIKCWNNSPSKRPQFSEIISLLL 593
+ ++M CW+ +RP F ++S +L
Sbjct: 230 VYTIMYSCWHEKADERPTFKILLSNIL 256
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E RW L D L +G +F V + +G++K K K +A E +L
Sbjct: 19 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS 78
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGLEFSF 137
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
+L +K+++ A VA G+++L +RDL ++ +L+ + + D G+
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
+ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 198 RDIHHI-DXXKKTTNGRLPVKWMAPEALF----DRIYTHQSDVWSFGVLLWEIFTLGGSP 252
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 253 YPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 130/286 (45%), Gaps = 39/286 (13%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRK 382
W ++ + + + ++G SF VY+G RV ++ + + EF
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA 71
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK----------LQ 432
+++ TC H +++ V V + VV +LM G + + R
Sbjct: 72 SVMKGFTCHH--VVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 433 TKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATE 492
+E+I++A ++A+G+ +LN +RDL ++ ++ V +GD G+ + + E
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGM---TRDIXETDX 185
Query: 493 YETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQA 546
G RW+APE + + S S+++SFG+V+WE+ + E Y S Q
Sbjct: 186 XRKGGKGLLPVRWMAPESLKDGVFTTS----SDMWSFGVVLWEITSLAEQPYQGLSNEQV 241
Query: 547 AVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G + P +CP+ + LM CW +P+ RP F EI++LL
Sbjct: 242 LKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRK 382
W ++ + + + ++G SF VY+G RV ++ + + EF
Sbjct: 9 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA 68
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK----------LQ 432
+++ TC H +++ V V + VV +LM G + + R
Sbjct: 69 SVMKGFTCHH--VVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 125
Query: 433 TKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATE 492
+E+I++A ++A+G+ +LN +RDL ++ ++ V +GD G+ + + E
Sbjct: 126 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGM---TRDIXETDX 182
Query: 493 YETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQA 546
G RW+APE + + S S+++SFG+V+WE+ + E Y S Q
Sbjct: 183 XRKGGKGLLPVRWMAPESLKDGVFTTS----SDMWSFGVVLWEITSLAEQPYQGLSNEQV 238
Query: 547 AVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G + P +CP+ + LM CW +P RP F EI++LL
Sbjct: 239 LKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 335 WLLNSDNLEFIDQIGPNS---FKGVY---KGKRVGIEKLKGCDKGNAYEFELRKDLLELM 388
W +N D+ E + IG + + Y K ++V I+++ +K EL K++ +
Sbjct: 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMS 68
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLI--------LKSRKLQTKEIIRIA 440
C H NI+ +Y V ++ L +V KL+ GGSV D+I KS L I I
Sbjct: 69 QCHHPNIVSYYTSFVVKDE-LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 127
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR- 499
+V EG+++L+ +G +RD+ + ILL G+V + D G+ + G+ T +
Sbjct: 128 REVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 500 ----WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAV------- 548
W+APE++ + + ++++SFG+ E+ TG A Y P++ +
Sbjct: 188 GTPCWMAPEVME---QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 244
Query: 549 -GIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSNR 604
+ E+ K + + ++ C P KRP +E LLR + N+
Sbjct: 245 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAE----LLRHKFFQKAKNK 297
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 123/250 (49%), Gaps = 24/250 (9%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCV-DENHGLCVVTKLME 417
G++V ++ LK GN +L+K++ L H+NI+++ +C D +G+ ++ + +
Sbjct: 50 GEQVAVKSLKPESGGNHIA-DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108
Query: 418 GGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
GS+ + + K++ K+ K+ ++ A+ + +G+ +L +RDL ++ +L++ V +G
Sbjct: 109 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 168
Query: 477 DMGIVTACKSVGEATEYETD---GYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ A ++ E + D W APE + ++ S+V+SFG+ + E++T
Sbjct: 169 DFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA----SDVWSFGVTLHELLT 224
Query: 534 ---GEAAYAAC-----SPVQAAVGIAAC------GLRPEIPKDCPQILKSLMIKCWNNSP 579
+++ A P + + G R P +CP + LM KCW P
Sbjct: 225 YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQP 284
Query: 580 SKRPQFSEII 589
S R F +I
Sbjct: 285 SNRTSFQNLI 294
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 123/250 (49%), Gaps = 24/250 (9%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCV-DENHGLCVVTKLME 417
G++V ++ LK GN +L+K++ L H+NI+++ +C D +G+ ++ + +
Sbjct: 38 GEQVAVKSLKPESGGNHIA-DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 96
Query: 418 GGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
GS+ + + K++ K+ K+ ++ A+ + +G+ +L +RDL ++ +L++ V +G
Sbjct: 97 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG 156
Query: 477 DMGIVTACKSVGEATEYETD---GYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ A ++ E + D W APE + ++ S+V+SFG+ + E++T
Sbjct: 157 DFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA----SDVWSFGVTLHELLT 212
Query: 534 ---GEAAYAAC-----SPVQAAVGIAAC------GLRPEIPKDCPQILKSLMIKCWNNSP 579
+++ A P + + G R P +CP + LM KCW P
Sbjct: 213 YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQP 272
Query: 580 SKRPQFSEII 589
S R F +I
Sbjct: 273 SNRTSFQNLI 282
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 132/291 (45%), Gaps = 53/291 (18%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY----EFELRK 382
W + + + ++G SF VY+G G+ K +K ++ + EF
Sbjct: 7 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV------------NDLILKSRK 430
+++ C H +++ V V + V+ +LM G + N+ +L
Sbjct: 67 SVMKEFNCHH--VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L ++I++A ++A+G+ +LN + +RDL ++ + V +GD G+
Sbjct: 124 LS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDI------ 175
Query: 491 TEYETDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYA 539
YETD YR W++PE + + V T+ S+V+SFG+V+WE+ T E Y
Sbjct: 176 --YETDYYRKGGKGLLPVRWMSPESLK---DGVFTTY-SDVWSFGVVLWEIATLAEQPYQ 229
Query: 540 ACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
S Q + GL + P +CP +L LM CW +P RP F EIIS
Sbjct: 230 GLSNEQVLRFVMEGGLL-DKPDNCPDMLLELMRMCWQYNPKMRPSFLEIIS 279
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 49/289 (16%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDL 384
++ + + + ++G SF VY+G RV ++ + + EF +
Sbjct: 13 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 72
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK----------LQTK 434
++ TC H +++ V V + VV +LM G + + R +
Sbjct: 73 MKGFTCHH--VVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 129
Query: 435 EIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE 494
E+I++A ++A+G+ +LN +RDL ++ ++ V +GD G+ YE
Sbjct: 130 EMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--------YE 181
Query: 495 TDGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSP 543
TD YR W+APE + + S S+++SFG+V+WE+ + E Y S
Sbjct: 182 TDYYRKGGKGLLPVRWMAPESLKDGVFTTS----SDMWSFGVVLWEITSLAEQPYQGLSN 237
Query: 544 VQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
Q + G + P +CP+ + LM CW +P RP F EI++LL
Sbjct: 238 EQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E RW L D L +G +F V + +G++K K K +A E +L
Sbjct: 11 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS 70
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 71 DLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 129
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
+L +K+++ A VA G+++L +RDL ++ +L+ + + D G+
Sbjct: 130 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
+ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 190 RDIHHI-DYYKKTTNGRLPVKWMAPEALF----DRIYTHQSDVWSFGVLLWEIFTLGGSP 244
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 245 YPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 300
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E RW L D L +G +F V + +G++K K K +A E +L
Sbjct: 8 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS 67
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 68 DLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 126
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
+L +K+++ A VA G+++L +RDL ++ +L+ + + D G+
Sbjct: 127 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
+ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 187 RDIHHI-DYYKKTTNGRLPVKWMAPEALF----DRIYTHQSDVWSFGVLLWEIFTLGGSP 241
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 242 YPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 297
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E RW L D L +G +F V + +G++K K K +A E +L
Sbjct: 12 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS 71
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 72 DLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 130
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
+L +K+++ A VA G+++L +RDL ++ +L+ + + D G+
Sbjct: 131 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
+ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 191 RDIHHI-DYYKKTTNGRLPVKWMAPEALF----DRIYTHQSDVWSFGVLLWEIFTLGGSP 245
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 246 YPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E RW L D L +G +F V + +G++K K K +A E +L
Sbjct: 19 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS 78
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 137
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
+L +K+++ A VA G+++L +RDL ++ +L+ + + D G+
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
+ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 198 RDIHHI-DYYKKTTNGRLPVKWMAPEALF----DRIYTHQSDVWSFGVLLWEIFTLGGSP 252
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 253 YPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 132/294 (44%), Gaps = 40/294 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELRKDL 384
RW L D L +G +F V + +G++K K K +A E +L +
Sbjct: 63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 122
Query: 385 LEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR----------- 429
E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 123 SEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181
Query: 430 -----KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC 484
+L +K+++ A VA G+++L +RDL ++ +L+ + + D G+
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 241
Query: 485 KSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
+ + + T+G +W+APE + T S+V+SFG+++WE+ T G + Y
Sbjct: 242 HHI-DYYKKTTNGRLPVKWMAPEALF----DRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 297 V-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 349
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E RW L D L +G +F V + +G++K K K +A E +L
Sbjct: 4 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS 63
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 64 DLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 122
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
+L +K+++ A VA G+++L +RDL ++ +L+ + + D G+
Sbjct: 123 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
+ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 183 RDIHHI-DYYKKTTNGRLPVKWMAPEALF----DRIYTHQSDVWSFGVLLWEIFTLGGSP 237
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 238 YPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 25/270 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVY-----KGKRVGIEKLK-GCDKGNAYEFELRKDLLELM 388
W + ++L+ ++G F V+ K +V ++ +K G A+ E +
Sbjct: 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANV----MK 238
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKS---RKLQTKEIIRIAIDVAE 445
T H +++ + V E + ++T+ M GS+ D LKS K ++I + +AE
Sbjct: 239 TLQHDKLVKLHAVVTKEP--IYIITEFMAKGSLLDF-LKSDEGSKQPLPKLIDFSAQIAE 295
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAP 503
G+ F+ +RDL + IL+ + D G+ + E T E + +W AP
Sbjct: 296 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED-NEYTAREGAKFPIKWTAP 354
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKD 562
E I S T S+V+SFG+++ E+VT G Y S + + G R P++
Sbjct: 355 EAINFG----SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-GYRMPRPEN 409
Query: 563 CPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
CP+ L ++M++CW N P +RP F I S+L
Sbjct: 410 CPEELYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 40/297 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E RW L D L +G +F V + +G++K K K +A E +L
Sbjct: 19 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS 78
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 137
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
+L +K+++ A VA G+++L +RDL ++ +L+ + + D G+
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
+ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 198 RDIHHI-DYYKKTTNGRLPVKWMAPEALF----DRIYTHQSDVWSFGVLLWEIFTLGGSP 252
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 253 YPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 25/270 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVY-----KGKRVGIEKLK-GCDKGNAYEFELRKDLLELM 388
W + ++L+ ++G F V+ K +V ++ +K G A+ E +
Sbjct: 10 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANV----MK 65
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKS---RKLQTKEIIRIAIDVAE 445
T H +++ + V E + ++T+ M GS+ D LKS K ++I + +AE
Sbjct: 66 TLQHDKLVKLHAVVTKE--PIYIITEFMAKGSLLDF-LKSDEGSKQPLPKLIDFSAQIAE 122
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAP 503
G+ F+ +RDL + IL+ + D G+ + E T E + +W AP
Sbjct: 123 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED-NEYTAREGAKFPIKWTAP 181
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKD 562
E I S T S+V+SFG+++ E+VT G Y S + + G R P++
Sbjct: 182 EAINFG----SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-GYRMPRPEN 236
Query: 563 CPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
CP+ L ++M++CW N P +RP F I S+L
Sbjct: 237 CPEELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 18/284 (6%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELM 388
+ +W + ++ ++G F VY+G K+ + K + E E K+ +
Sbjct: 3 LDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEG 446
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++
Sbjct: 63 EIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPE 504
+++L +RDL ++ L+ + V + D G+ + + T + + +W APE
Sbjct: 122 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPIKWTAPE 180
Query: 505 IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDC 563
+A + S+ S+V++FG+++WE+ T G + Y P Q + R E P+ C
Sbjct: 181 SLAYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDPSQV-YELLEKDYRMERPEGC 235
Query: 564 PQILKSLMIKCWNNSPSKRPQFSEI---ISLLLRTNNISNSSNR 604
P+ + LM CW +PS RP F+EI + + ++IS+ +
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK 279
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 131/282 (46%), Gaps = 32/282 (11%)
Query: 335 WLLNSDNLEFIDQIGPNS---FKGVY---KGKRVGIEKLKGCDKGNAYEFELRKDLLELM 388
W +N D+ E + IG + + Y K ++V I+++ +K EL K++ +
Sbjct: 5 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMS 63
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLI--------LKSRKLQTKEIIRIA 440
C H NI+ +Y V ++ L +V KL+ GGSV D+I KS L I I
Sbjct: 64 QCHHPNIVSYYTSFVVKDE-LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 122
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR- 499
+V EG+++L+ +G +RD+ + ILL G+V + D G+ + G+ T +
Sbjct: 123 REVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 500 ----WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAV------- 548
W+APE++ + + ++++SFG+ E+ TG A Y P++ +
Sbjct: 183 GTPCWMAPEVME---QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 239
Query: 549 -GIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
+ E+ K + + ++ C P KRP +E++
Sbjct: 240 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKL---KGCDKGNAYEFELRKDLLE---- 386
+W+LN ++L +QIG +F V+ G+ L K C + +L+ L+
Sbjct: 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRE--TLPPDLKAKFLQEARI 165
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGS-VNDLILKSRKLQTKEIIRIAIDVAE 445
L H NI++ VC + + +V +L++GG + L + +L+ K ++++ D A
Sbjct: 166 LKQYSHPNIVRLIGVCT-QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAA 224
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR-----W 500
G+++L +RDL ++ L+ + + D G+ + + + G R W
Sbjct: 225 GMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGM---SREEADGVXAASGGLRQVPVKW 281
Query: 501 LAPEII-AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
APE + G S S+ W SFG+++WE + G + Y S Q + G P
Sbjct: 282 TAPEALNYGRYSSESDVW-----SFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP- 335
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
P+ CP + LM +CW P +RP FS I
Sbjct: 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 43/286 (15%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY----EFELRK 382
W + + + ++G SF VY+G G+ K +K ++ + EF
Sbjct: 5 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 64
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV------------NDLILKSRK 430
+++ C H +++ V V + V+ +LM G + N+ +L
Sbjct: 65 SVMKEFNCHH--VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L ++I++A ++A+G+ +LN + +RDL ++ ++ V +GD G+ + + E
Sbjct: 122 LS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGM---TRDIXET 176
Query: 491 TEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPV 544
G RW++PE + + V T+ S+V+SFG+V+WE+ T E Y S
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLK---DGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNE 232
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
Q + GL + P +CP +L LM CW +P RP F EIIS
Sbjct: 233 QVLRFVMEGGLL-DKPDNCPDMLLELMRMCWQYNPKMRPSFLEIIS 277
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 43/286 (15%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY----EFELRK 382
W + + + ++G SF VY+G G+ K +K ++ + EF
Sbjct: 14 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV------------NDLILKSRK 430
+++ C H +++ V V + V+ +LM G + N+ +L
Sbjct: 74 SVMKEFNCHH--VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L ++I++A ++A+G+ +LN + +RDL ++ ++ V +GD G+ + + E
Sbjct: 131 LS--KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGM---TRDIXET 185
Query: 491 TEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPV 544
G RW++PE + + V T+ S+V+SFG+V+WE+ T E Y S
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLK---DGVFTTY-SDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
Q + GL + P +CP +L LM CW +P RP F EIIS
Sbjct: 242 QVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 286
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKL---KGCDKGNAYEFELRKDLLE---- 386
+W+LN ++L +QIG +F V+ G+ L K C + +L+ L+
Sbjct: 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRE--TLPPDLKAKFLQEARI 165
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGS-VNDLILKSRKLQTKEIIRIAIDVAE 445
L H NI++ VC + + +V +L++GG + L + +L+ K ++++ D A
Sbjct: 166 LKQYSHPNIVRLIGVCT-QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAA 224
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR-----W 500
G+++L +RDL ++ L+ + + D G+ + + + G R W
Sbjct: 225 GMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGM---SREEADGVYAASGGLRQVPVKW 281
Query: 501 LAPEII-AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
APE + G S S+ W SFG+++WE + G + Y S Q + G P
Sbjct: 282 TAPEALNYGRYSSESDVW-----SFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP- 335
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
P+ CP + LM +CW P +RP FS I
Sbjct: 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 21/260 (8%)
Query: 348 IGPNSFKGVYKGKRVGIEKLKGCD-----KGNAYEFELRKDLLELMTCG---HKNILQFY 399
IG F V +G+ K + C KG E + R+ L E G H NI++
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYR 458
V V + + ++T+ ME G+++ + L + +++ + +A G+++L + +R
Sbjct: 84 GV-VTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 142
Query: 459 DLNSQRILLDRHGNVCLGDMGIVTACK-SVGEATEYETDG----YRWLAPEIIAGDPESV 513
DL ++ IL++ + + D G+ + + + TE + G RW APE IA
Sbjct: 143 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR---- 198
Query: 514 SETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMI 572
T S+ +S+G+V+WE+++ GE Y S Q + R P DCP L LM+
Sbjct: 199 KFTSASDAWSYGIVMWEVMSFGERPYWDMSN-QDVINAIEQDYRLPPPPDCPTSLHQLML 257
Query: 573 KCWNNSPSKRPQFSEIISLL 592
CW + RP+F +++S L
Sbjct: 258 DCWQKDRNARPRFPQVVSAL 277
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+K+L
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 209 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 263
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 264 PLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+KFL
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 210 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 264
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 265 PLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+KFL
Sbjct: 149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 208
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 269 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 323
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 324 PLYEVMLKCWHPKAEMRPSFSELVS 348
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+KFL
Sbjct: 95 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 154
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 215 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 269
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 270 PLYEVMLKCWHPKAEMRPSFSELVS 294
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+KFL
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 211 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 265
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 266 PLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+KFL
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 210 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 264
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 265 PLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+KFL
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 147
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 208 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 262
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 263 PLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E RW L D L +G +F V + +G++K K K +A E +L
Sbjct: 19 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS 78
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + L++R
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLRE-YLQAREPPGLEYS 136
Query: 430 ---------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI 480
+L +K+++ A VA G+++L +RDL ++ +L+ + + D G+
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL 196
Query: 481 VTACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEA 536
+ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 197 ARDIHHI-DYYKKTTNGRLPVKWMAPEALF----DRIYTHQSDVWSFGVLLWEIFTLGGS 251
Query: 537 AYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 252 PYPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+K+L
Sbjct: 108 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 167
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 228 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 282
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 283 PLYEVMLKCWHPKAEMRPSFSELVS 307
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+K+L
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 210 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 264
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 265 PLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+KFL
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 211 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 265
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 266 PLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 136/290 (46%), Gaps = 39/290 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 99
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 100 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 159
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 220 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISN 600
R P CP + +M +CWNN+ ++RP F + L LR + I +
Sbjct: 276 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRD 322
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+K+L
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 209 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 263
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 264 PLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+K+L
Sbjct: 82 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 141
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 202 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 256
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 257 PLYEVMLKCWHPKAEMRPSFSELVS 281
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+K+L
Sbjct: 109 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 168
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 229 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 283
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 284 PLYEVMLKCWHPKAEMRPSFSELVS 308
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+K+L
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 147
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 208 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 262
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 263 PLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 71
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 131
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 192 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 295
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+K+L
Sbjct: 87 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 146
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 207 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 261
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 262 PLYEVMLKCWHPKAEMRPSFSELVS 286
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+K+L
Sbjct: 85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 144
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 205 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 259
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 260 PLYEVMLKCWHPKAEMRPSFSELVS 284
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIAIDVAEGIKFL 450
H N+L +C+ VV M+ G + + I ++ K++I + VA+G+K+L
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEII 506
+RDL ++ +LD V + D G+ + + G +W+A E +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
++ T S+V+SFG+++WE++T G Y + V + G R P+ CP
Sbjct: 210 ----QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPD 264
Query: 566 ILKSLMIKCWNNSPSKRPQFSEIIS 590
L +M+KCW+ RP FSE++S
Sbjct: 265 PLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 68
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 128
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 189 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 292
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 73
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 74 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 133
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 134 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 194 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 249
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 250 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 297
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 67
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 68 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 127
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 128 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 188 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 243
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 244 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 291
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 68
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 128
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 189 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 292
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 75
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 76 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 135
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 136 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 196 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 251
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 252 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 299
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 40/304 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E +W D L +G +F V + VGI+K K + K +A E +L
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 205 RDINNI-DXXKKTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNN 597
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 260 YPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 598 ISNS 601
++ +
Sbjct: 319 LTTN 322
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 40/304 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E +W D L +G +F V + VGI+K K + K +A E +L
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEXSY 144
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 205 RDINNI-DXXKKTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNN 597
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 260 YPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 598 ISNS 601
++ +
Sbjct: 319 LTTN 322
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 74
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 75 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 134
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 135 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 195 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 250
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 251 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 298
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 120/247 (48%), Gaps = 18/247 (7%)
Query: 348 IGPNSFKGVYKGK------RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV 401
+G ++ VY G+ R+ I+++ ++ + Y L +++ HKNI+Q Y
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIP--ERDSRYSQPLHEEIALHKHLKHKNIVQ-YLG 86
Query: 402 CVDENHGLCVVTKLMEGGSVNDLILKSR----KLQTKEIIRIAIDVAEGIKFLNDHGVAY 457
EN + + + + GGS++ L L+S+ K + I + EG+K+L+D+ + +
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSAL-LRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 458 RDLNSQRILLDRHGNVC-LGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSET 516
RD+ +L++ + V + D G + TE T +++APEII P +
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 517 WMSNVYSFGMVIWEMVTGEAAYAACSPVQAAV-GIAACGLRPEIPKDCPQILKSLMIKCW 575
++++S G I EM TG+ + QAA+ + + PEIP+ K+ ++KC+
Sbjct: 206 --ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCF 263
Query: 576 NNSPSKR 582
P KR
Sbjct: 264 EPDPDKR 270
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 72
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 73 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 132
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 133 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 193 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 248
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 249 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 296
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 136/290 (46%), Gaps = 39/290 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 66
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 67 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 126
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 127 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 187 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 242
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISN 600
R P CP + +M +CWNN+ ++RP F + L LR + I +
Sbjct: 243 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRD 289
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 120/260 (46%), Gaps = 21/260 (8%)
Query: 348 IGPNSFKGVYKGKRVGIEKLKGCD-----KGNAYEFELRKDLLELMTCG---HKNILQFY 399
IG F V +G+ K + C KG E + R+ L E G H NI++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYR 458
V V + + ++T+ ME G+++ + L + +++ + +A G+++L + +R
Sbjct: 82 GV-VTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 140
Query: 459 DLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD-----GYRWLAPEIIAGDPESV 513
DL ++ IL++ + + D G+ + Y + RW APE IA
Sbjct: 141 DLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR---- 196
Query: 514 SETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMI 572
T S+ +S+G+V+WE+++ GE Y S Q + R P DCP L LM+
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFGERPYWDMSN-QDVINAIEQDYRLPPPPDCPTSLHQLML 255
Query: 573 KCWNNSPSKRPQFSEIISLL 592
CW + RP+F +++S L
Sbjct: 256 DCWQKDRNARPRFPQVVSAL 275
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGV----------YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 86
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 87 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 146
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 207 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 262
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 263 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 310
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 133/284 (46%), Gaps = 18/284 (6%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELM 388
+ +W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEG 446
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++
Sbjct: 63 EIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPE 504
+++L +RDL ++ L+ + V + D G+ + + T + + +W APE
Sbjct: 122 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTFTAHAGAKFPIKWTAPE 180
Query: 505 IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDC 563
+A + S+ S+V++FG+++WE+ T G + Y P Q + R E P+ C
Sbjct: 181 SLAYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDPSQV-YELLEKDYRMERPEGC 235
Query: 564 PQILKSLMIKCWNNSPSKRPQFSEI---ISLLLRTNNISNSSNR 604
P+ + LM CW +PS RP F+EI + + ++IS+ +
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK 279
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 119/248 (47%), Gaps = 25/248 (10%)
Query: 359 GKR---VGIEKLKGCDKGNAYEFELRKDLLE----LMTCGHKNILQFYCVCVDENHGLCV 411
GKR V I+ LK + Y + R+D L + H N++ V V ++ + +
Sbjct: 58 GKREIFVAIKTLK-----SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGV-VTKSTPVMI 111
Query: 412 VTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+T+ ME GS++ + ++ + +++ + +A G+K+L D +RDL ++ IL++ +
Sbjct: 112 ITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSN 171
Query: 471 GNVCLGDMGIVTACKSVGEATEYETD-----GYRWLAPEIIAGDPESVSETWMSNVYSFG 525
+ D G+ + Y + RW APE I + T S+V+S+G
Sbjct: 172 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI----QYRKFTSASDVWSYG 227
Query: 526 MVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQ 584
+V+WE+++ GE Y + Q + R P DCP L LM+ CW + RP+
Sbjct: 228 IVMWEVMSYGERPYWDMTN-QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPK 286
Query: 585 FSEIISLL 592
F +I++ L
Sbjct: 287 FGQIVNTL 294
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 120/247 (48%), Gaps = 18/247 (7%)
Query: 348 IGPNSFKGVYKGK------RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV 401
+G ++ VY G+ R+ I+++ ++ + Y L +++ HKNI+Q Y
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIP--ERDSRYSQPLHEEIALHKHLKHKNIVQ-YLG 72
Query: 402 CVDENHGLCVVTKLMEGGSVNDLILKSR----KLQTKEIIRIAIDVAEGIKFLNDHGVAY 457
EN + + + + GGS++ L L+S+ K + I + EG+K+L+D+ + +
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSAL-LRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 458 RDLNSQRILLDRHGNVC-LGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSET 516
RD+ +L++ + V + D G + TE T +++APEII P +
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 191
Query: 517 WMSNVYSFGMVIWEMVTGEAAYAACSPVQAAV-GIAACGLRPEIPKDCPQILKSLMIKCW 575
++++S G I EM TG+ + QAA+ + + PEIP+ K+ ++KC+
Sbjct: 192 --ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCF 249
Query: 576 NNSPSKR 582
P KR
Sbjct: 250 EPDPDKR 256
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGV----------YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 86
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 87 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 146
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 207 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 262
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 263 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 310
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 40/304 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E +W D L +G +F V + VGI+K K + K +A E +L
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 86 DLVSEMEMMKMIGKHKNIIHLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 205 RDINNI-DYYKKTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNN 597
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 260 YPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 598 ISNS 601
++ +
Sbjct: 319 LTTN 322
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 68
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 128
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 189 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 292
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 135/317 (42%), Gaps = 64/317 (20%)
Query: 317 VSVDEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD----- 371
+SVD ++ + E +W NL +G F V K ++ G
Sbjct: 5 LSVDAFKIL-----EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVK 59
Query: 372 --KGNAYEFELRKDLLE---LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
K NA ELR L E L H ++++ Y C ++ L ++ + + GS+ +
Sbjct: 60 MLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLR 118
Query: 427 KSRK------------------------LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNS 462
+SRK L ++I A +++G+++L + + +RDL +
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAA 178
Query: 463 QRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY----------RWLAPEIIAGDPES 512
+ IL+ + + D G+ YE D Y +W+A E + +
Sbjct: 179 RNILVAEGRKMKISDFGLSRDV--------YEEDSYVKRSQGRIPVKWMAIESLF---DH 227
Query: 513 VSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLM 571
+ T S+V+SFG+++WE+VT G Y P + + G R E P +C + + LM
Sbjct: 228 IYTT-QSDVWSFGVLLWEIVTLGGNPYPGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLM 285
Query: 572 IKCWNNSPSKRPQFSEI 588
++CW P KRP F++I
Sbjct: 286 LQCWKQEPDKRPVFADI 302
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 40/304 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E +W D L +G +F V + VGI+K K + K +A E +L
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLS 85
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 205 RDINNI-DYYKKTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNN 597
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 260 YPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 598 ISNS 601
++ +
Sbjct: 319 LTTN 322
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 40/304 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E +W D L +G +F V + VGI+K K + K +A E +L
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 86 DLVSEMEMMKMIGKHKNIITLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 205 RDINNI-DYYKKTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNN 597
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 260 YPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 598 ISNS 601
++ +
Sbjct: 319 LTTN 322
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 40/304 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E +W D L +G +F V + VGI+K K + K +A E +L
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 205 RDINNI-DYYKNTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNN 597
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 260 YPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 598 ISNS 601
++ +
Sbjct: 319 LTTN 322
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 136/304 (44%), Gaps = 40/304 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E +W D L +G +F V + VGI+K K + K +A E +L
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 205 RDINNI-DYYKKTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNN 597
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 260 YPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 598 ISNS 601
++ +
Sbjct: 319 LTTN 322
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 133/276 (48%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + + L +
Sbjct: 58 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIIS 115
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 116 KFNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 173
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A+ Y G
Sbjct: 174 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 233
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 234 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 287
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 288 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 323
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 40/304 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E +W D L +G +F V + VGI+K K + K +A E +L
Sbjct: 26 EDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 85
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ G++ + + R
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVAYASKGNLREYLRARRPPGMEYSY 144
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 205 RDINNI-DYYKKTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNN 597
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 260 YPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 598 ISNS 601
++ +
Sbjct: 319 LTTN 322
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 15/260 (5%)
Query: 342 LEFIDQIGPNS----FKGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQ 397
L F+ ++ N +KG ++G + ++ LK D + ++ L H N+L
Sbjct: 12 LNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 398 FYCVCVDEN-HGLCVVTKLMEGGSVNDLILKSRKL--QTKEIIRIAIDVAEGIKFLN--D 452
C ++T GS+ +++ + + ++ A+D A G FL+ +
Sbjct: 72 VLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLE 131
Query: 453 HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPES 512
+ LNS+ + +D + + + +S G W+APE + PE
Sbjct: 132 PLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXY-----APAWVAPEALQKKPED 186
Query: 513 VSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMI 572
+ ++ +SF +++WE+VT E +A S + +A GLRP IP + L
Sbjct: 187 TNRR-SADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVSKLXK 245
Query: 573 KCWNNSPSKRPQFSEIISLL 592
C N P+KRP+F I+ +L
Sbjct: 246 ICXNEDPAKRPKFDXIVPIL 265
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 40/304 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E +W D L +G F V + VGI+K K + K +A E +L
Sbjct: 13 EDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 72
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 73 DLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 131
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 132 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA 191
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 192 RDINNI-DYYKKTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSP 246
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNN 597
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 247 YPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 305
Query: 598 ISNS 601
++ +
Sbjct: 306 LTTN 309
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 31/268 (11%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVY-----KGKRVGIEKLK-GCDKGNAYEFELRKDLLELM 388
W + ++L+ ++G F V+ K +V ++ +K G A+ E +
Sbjct: 177 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANV----MK 232
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKS---RKLQTKEIIRIAIDVAE 445
T H +++ + V E + ++T+ M GS+ D LKS K ++I + +AE
Sbjct: 233 TLQHDKLVKLHAVVTKEP--IYIITEFMAKGSLLDF-LKSDEGSKQPLPKLIDFSAQIAE 289
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
G+ F+ +RDL + IL+ + D G+ +W APE
Sbjct: 290 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFP---------IKWTAPEA 340
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCP 564
I S T S+V+SFG+++ E+VT G Y S + + G R P++CP
Sbjct: 341 INFG----SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-GYRMPRPENCP 395
Query: 565 QILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ L ++M++CW N P +RP F I S+L
Sbjct: 396 EELYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 71
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ + + K + ++ ++++ + +G++
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGME 131
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 192 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 295
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 133/276 (48%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + + L +
Sbjct: 38 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIIS 95
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 96 KFNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 153
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A+ Y G
Sbjct: 154 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 213
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 214 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 267
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 268 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 303
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 133/276 (48%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + + L +
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIIS 89
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 90 KLNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A+ Y G
Sbjct: 148 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 261
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 262 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 297
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 133/276 (48%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + + L +
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIIS 89
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 90 KFNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A+ Y G
Sbjct: 148 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 261
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 262 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 297
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 133/276 (48%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + + L +
Sbjct: 48 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIIS 105
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 106 KFNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 163
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A+ Y G
Sbjct: 164 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 223
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 224 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 277
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 278 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 313
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELRKDL 384
+W D L +G +F V + VGI+K K + K +A E +L +
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 385 LEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR----------- 429
E+ M HKNI+ C ++ L V+ G++ + + R
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 430 -----KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC 484
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 485 KSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G + Y
Sbjct: 208 NNI-DYYKKTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISN 600
PV+ + G R + P +C L +M CW+ PS+RP F +++ L R ++
Sbjct: 263 I-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
Query: 601 S 601
+
Sbjct: 322 N 322
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 133/276 (48%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + ++ +
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 106 N--HQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A+ Y G
Sbjct: 162 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 275
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 276 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 133/276 (48%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + + L +
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIIS 103
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 104 KFNHQNIVR--CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A+ Y G
Sbjct: 162 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 275
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 276 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 136/291 (46%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 71
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + + ++ ++++ + +G++
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGME 131
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +RDL ++ IL++ V +GD G+ E + + G W APE
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 192 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 295
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 40/304 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E +W D L +G F V + VGI+K K + K +A E +L
Sbjct: 72 EDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 131
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 190
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 191 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 250
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 251 RDINNI-DYYKKTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSP 305
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNN 597
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 306 YPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364
Query: 598 ISNS 601
++ +
Sbjct: 365 LTTN 368
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 40/304 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E +W D L +G F V + VGI+K K + K +A E +L
Sbjct: 15 EDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 74
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 75 DLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 133
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 134 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 193
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 194 RDINNI-DYYKKTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSP 248
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNN 597
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 249 YPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 307
Query: 598 ISNS 601
++ +
Sbjct: 308 LTTN 311
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELM 388
+ +W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 62
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEG 446
H N++Q VC E ++ + M G++ D + + + + ++ +A ++
Sbjct: 63 EIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPE 504
+++L +RDL ++ L+ + V + D G+ + + T + + +W APE
Sbjct: 122 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPIKWTAPE 180
Query: 505 IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDC 563
+A + S+ S+V++FG+++WE+ T G + Y P Q + R E P+ C
Sbjct: 181 SLAYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDPSQV-YELLEKDYRMERPEGC 235
Query: 564 PQILKSLMIKCWNNSPSKRPQFSEI 588
P+ + LM CW +PS RP F+EI
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 40/304 (13%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD---------KGNAYEFELR 381
E +W D L +G F V + VGI+K K + K +A E +L
Sbjct: 18 EDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS 77
Query: 382 KDLLEL----MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-------- 429
+ E+ M HKNI+ C ++ L V+ + G++ + + R
Sbjct: 78 DLVSEMEMMKMIGKHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 136
Query: 430 --------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV 481
++ K+++ +A G+++L +RDL ++ +L+ + + + D G+
Sbjct: 137 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 196
Query: 482 TACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAA 537
++ + + T+G +W+APE + T S+V+SFG+++WE+ T G +
Sbjct: 197 RDINNI-DYYKKTTNGRLPVKWMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSP 251
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNN 597
Y PV+ + G R + P +C L +M CW+ PS+RP F +++ L R
Sbjct: 252 YPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 310
Query: 598 ISNS 601
++ +
Sbjct: 311 LTTN 314
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 133/276 (48%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + + L +
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIIS 89
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 90 KFNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A+ Y G
Sbjct: 148 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAM 207
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 261
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 262 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 297
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 341 NLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
+L+F+ Q+G +F V G+ V ++KL+ + + +FE ++L+ +
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK--SL 69
Query: 391 GHKNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIK 448
H NI+++ VC L ++ + + GS+ D + K + ++ ++++ + +G++
Sbjct: 70 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 129
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR---WLAPEI 505
+L +R+L ++ IL++ V +GD G+ E + + G W APE
Sbjct: 130 YLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTG-EAAYAACSPVQAAVGIAACGL--------- 555
+ SV+ S+V+SFG+V++E+ T E + + + +G G
Sbjct: 190 LTESKFSVA----SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 245
Query: 556 -----RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNS 601
R P CP + +M +CWNN+ ++RP F + L LR + I ++
Sbjct: 246 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD---LALRVDQIRDN 293
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 133/276 (48%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + + L +
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIIS 88
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 89 KFNHQNIVR--CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A+ Y G
Sbjct: 147 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 260
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 261 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 296
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 133/276 (48%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + + L +
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIIS 88
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 89 KFNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A+ Y G
Sbjct: 147 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 260
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 261 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 296
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 133/276 (48%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + + L +
Sbjct: 23 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIIS 80
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 81 KFNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 138
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A+ Y G
Sbjct: 139 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 198
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 199 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 252
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 253 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 288
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 122/292 (41%), Gaps = 40/292 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD-------KGNAYEFELRKDLLE 386
+W D L+ +G +F V + GI+K C K A E R + E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 387 L---MTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L + GH N++ C L V+T+ + G+++ + R
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 431 ----LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS 486
L + +I + VA+G++FL +RDL ++ ILL V + D G+ +
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RD 188
Query: 487 VGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
+ + +Y G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 189 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPG 244
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 132/276 (47%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + + L +
Sbjct: 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIIS 129
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 130 KFNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 187
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A Y G
Sbjct: 188 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 247
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 248 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 301
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 302 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 337
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 24/252 (9%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHG-LCVVTKLME 417
G+ V ++ LK D G + ++++ L T H++I+++ C D L +V + +
Sbjct: 60 GEMVAVKALKA-DAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 418 GGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGD 477
GS+ D L + +++ A + EG+ +L+ +RDL ++ +LLD V +GD
Sbjct: 119 LGSLRD-YLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGD 177
Query: 478 MGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
G+ A E DG W APE + + + S+V+SFG+ ++E++T
Sbjct: 178 FGLAKAVPEGHEXYRVREDGDSPVFWYAPECL----KEYKFYYASDVWSFGVTLYELLTH 233
Query: 535 -EAAYAACSPVQAAVGIAAC-------------GLRPEIPKDCPQILKSLMIKCWNNSPS 580
+++ + + +GIA G R P CP + LM CW S
Sbjct: 234 CDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEAS 293
Query: 581 KRPQFSEIISLL 592
RP F +I +L
Sbjct: 294 FRPTFENLIPIL 305
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 132/276 (47%), Gaps = 37/276 (13%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKL-KGCDKGNAYEFELRKDLLELM 388
N+ I +G +F VY+G+ +V ++ L + C + + +F + + L +
Sbjct: 49 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIIS 106
Query: 389 TCGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIA 440
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 107 KFNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 164
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG--- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A Y G
Sbjct: 165 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 224
Query: 498 --YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAAC 553
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q +
Sbjct: 225 LPVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTS 278
Query: 554 GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
G R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 279 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 314
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 122/292 (41%), Gaps = 40/292 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD-------KGNAYEFELRKDLLE 386
+W D L+ +G +F V + GI+K C K A E R + E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 387 L---MTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L + GH N++ C L V+T+ + G+++ + R
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 431 ----LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS 486
L + +I + VA+G++FL +RDL ++ ILL V + D G+ +
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RD 188
Query: 487 VGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
+ + +Y G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 189 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPG 244
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 128/275 (46%), Gaps = 35/275 (12%)
Query: 341 NLEFIDQIGPNSFKGVYKGK-----------RVGIEKLKGCDKGNAYEFELRKDLLELMT 389
N+ I +G +F VY+G+ +V ++ L E + + L +
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-YSEQDELDFLMEALIISK 104
Query: 390 CGHKNILQFYCVCVD-ENHGLCVVTKLMEGGSVNDLILKSRK-------LQTKEIIRIAI 441
H+NI++ C+ V ++ ++ +LM GG + + ++R L +++ +A
Sbjct: 105 FNHQNIVR--CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG---- 497
D+A G ++L ++ +RD+ ++ LL G + +G + + A+ Y G
Sbjct: 163 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 498 -YRWLAPE-IIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACG 554
+W+ PE + G S ++TW SFG+++WE+ + G Y + S Q + G
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTW-----SFGVLLWEIFSLGYMPYPSKS-NQEVLEFVTSG 276
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
R + PK+CP + +M +CW + P RP F+ I+
Sbjct: 277 GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 118/248 (47%), Gaps = 25/248 (10%)
Query: 359 GKR---VGIEKLKGCDKGNAYEFELRKDLLE----LMTCGHKNILQFYCVCVDENHGLCV 411
GKR V I+ LK + Y + R+D L + H N++ V V ++ + +
Sbjct: 32 GKREIFVAIKTLK-----SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGV-VTKSTPVMI 85
Query: 412 VTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+T+ ME GS++ + ++ + +++ + +A G+K+L D +R L ++ IL++ +
Sbjct: 86 ITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSN 145
Query: 471 GNVCLGDMGIVTACKSVGEATEYETD-----GYRWLAPEIIAGDPESVSETWMSNVYSFG 525
+ D G+ + Y + RW APE I + T S+V+S+G
Sbjct: 146 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI----QYRKFTSASDVWSYG 201
Query: 526 MVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQ 584
+V+WE+++ GE Y + Q + R P DCP L LM+ CW + RP+
Sbjct: 202 IVMWEVMSYGERPYWDMTN-QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPK 260
Query: 585 FSEIISLL 592
F +I++ L
Sbjct: 261 FGQIVNTL 268
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 64/317 (20%)
Query: 317 VSVDEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD----- 371
+SVD ++ + E +W NL +G F V K ++ G
Sbjct: 5 LSVDAFKIL-----EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVK 59
Query: 372 --KGNAYEFELRKDLLE---LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
K NA ELR L E L H ++++ Y C ++ L ++ + + GS+ +
Sbjct: 60 MLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLR 118
Query: 427 KSRK------------------------LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNS 462
+SRK L ++I A +++G+++L + + +RDL +
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAA 178
Query: 463 QRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----------YRWLAPEIIAGDPES 512
+ IL+ + + D G+ YE D +W+A E + +
Sbjct: 179 RNILVAEGRKMKISDFGLSRDV--------YEEDSXVKRSQGRIPVKWMAIESLF---DH 227
Query: 513 VSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLM 571
+ T S+V+SFG+++WE+VT G Y P + + G R E P +C + + LM
Sbjct: 228 IYTT-QSDVWSFGVLLWEIVTLGGNPYPGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLM 285
Query: 572 IKCWNNSPSKRPQFSEI 588
++CW P KRP F++I
Sbjct: 286 LQCWKQEPDKRPVFADI 302
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 36/288 (12%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY--EFELRKD 383
+W D L +G +F V + GI+K +K +G + L +
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 80
Query: 384 LLELMTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L L+ GH N++ C L V+ + + G+++ + R
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L + +I + VA+G++FL +RDL ++ ILL V + D G+ + + +
Sbjct: 141 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGL---ARDIYKD 197
Query: 491 TEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPV 544
+Y G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 198 PDYVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPGVKID 253
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 254 EEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 124/269 (46%), Gaps = 15/269 (5%)
Query: 328 GGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDL 384
G +W + ++ ++G + VY+G K+ + K + E E K+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAID 442
+ H N++Q VC E ++T+ M G++ D + + + + ++ +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RW 500
++ +++L +RDL ++ L+ + V + D G+ + + T + + +W
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKW 178
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
APE +A + S+ S+V++FG+++WE+ T G + Y Q + R E
Sbjct: 179 TAPESLAYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMER 233
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
P+ CP+ + LM CW +PS RP F+EI
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 124/269 (46%), Gaps = 15/269 (5%)
Query: 328 GGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDL 384
G +W + ++ ++G + VY+G K+ + K + E E K+
Sbjct: 14 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 73
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAID 442
+ H N++Q VC E ++T+ M G++ D + + + + ++ +A
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 132
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RW 500
++ +++L +RDL ++ L+ + V + D G+ + + T + + +W
Sbjct: 133 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKW 191
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
APE +A + S+ S+V++FG+++WE+ T G + Y Q + R E
Sbjct: 192 TAPESLAYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMER 246
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
P+ CP+ + LM CW +PS RP F+EI
Sbjct: 247 PEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 124/269 (46%), Gaps = 15/269 (5%)
Query: 328 GGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDL 384
G +W + ++ ++G + VY+G K+ + K + E E K+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAID 442
+ H N++Q VC E ++T+ M G++ D + + + + ++ +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RW 500
++ +++L +RDL ++ L+ + V + D G+ + + T + + +W
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKW 178
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
APE +A + S+ S+V++FG+++WE+ T G + Y Q + R E
Sbjct: 179 TAPESLAYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMER 233
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
P+ CP+ + LM CW +PS RP F+EI
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 64/317 (20%)
Query: 317 VSVDEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD----- 371
+SVD ++ + E +W NL +G F V K ++ G
Sbjct: 5 LSVDAFKIL-----EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVK 59
Query: 372 --KGNAYEFELRKDLLE---LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL 426
K NA ELR L E L H ++++ Y C ++ L ++ + + GS+ +
Sbjct: 60 MLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLR 118
Query: 427 KSRK------------------------LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNS 462
+SRK L ++I A +++G+++L + + +RDL +
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAA 178
Query: 463 QRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----------YRWLAPEIIAGDPES 512
+ IL+ + + D G+ YE D +W+A E + +
Sbjct: 179 RNILVAEGRKMKISDFGLSRDV--------YEEDSXVKRSQGRIPVKWMAIESLF---DH 227
Query: 513 VSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLM 571
+ T S+V+SFG+++WE+VT G Y P + + G R E P +C + + LM
Sbjct: 228 IYTT-QSDVWSFGVLLWEIVTLGGNPYPGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLM 285
Query: 572 IKCWNNSPSKRPQFSEI 588
++CW P KRP F++I
Sbjct: 286 LQCWKQEPDKRPVFADI 302
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 16/262 (6%)
Query: 342 LEFIDQIGPNSFKGVYKGKRVGIEKL---KGCDKGNAYEFELRKDLLELMT-CGHKNILQ 397
E ++ +G ++ VYKG+ V +L K D E E+++++ L H+NI
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 398 FYCVCVDEN-----HGLCVVTKLMEGGSVNDLI--LKSRKLQTKEIIRIAIDVAEGIKFL 450
+Y + +N L +V + GSV DLI K L+ + I I ++ G+ L
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC-KSVGEATEYETDGYRWLAPEIIAGD 509
+ H V +RD+ Q +LL + V L D G+ ++VG + Y W+APE+IA D
Sbjct: 146 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPY-WMAPEVIACD 204
Query: 510 --PESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQIL 567
P++ + + S+++S G+ EM G P++A I K +
Sbjct: 205 ENPDATYD-FKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKF 263
Query: 568 KSLMIKCWNNSPSKRPQFSEII 589
+S + C + S+RP +++
Sbjct: 264 QSFIESCLVKNHSQRPATEQLM 285
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 72 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 130
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +RDL ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 190 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 244
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 245 KVYELMRACWQWNPSDRPSFAEI 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 72 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +RDL ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 190 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 244
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 245 KVYELMRACWQWNPSDRPSFAEI 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 72 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +RDL ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPIKWTAPESL 189
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 190 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 244
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 245 KVYELMRACWQWNPSDRPSFAEI 267
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKG---------KRVGIEKLKGCDKGNAYEFELRKDLLEL 387
+ + +E IG F V++G V I+ K C + E + ++ L +
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEALTM 65
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEG 446
H +I++ V + EN + ++ +L G + + ++ L +I A ++
Sbjct: 66 RQFDHPHIVKLIGV-ITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLA 502
+ +L +RD+ ++ +L+ + V LGD G+ + + ++T Y+ +W+A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL---SRYMEDSTYYKASKGKLPIKWMA 180
Query: 503 PEIIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA-----VGIAACGLR 556
PE I S S+ WM FG+ +WE++ P Q +G G R
Sbjct: 181 PESINFRRFTSASDVWM-----FGVCMWEILM-----HGVKPFQGVKNNDVIGRIENGER 230
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
+P +CP L SLM KCW PS+RP+F+E+
Sbjct: 231 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 72 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +RDL ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 190 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 244
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 245 KVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 70
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 71 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 129
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +RDL ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 130 YLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESL 188
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 189 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 243
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 244 KVYELMRACWQWNPSDRPSFAEI 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 68
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 69 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +RDL ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 128 YLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESL 186
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 187 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 241
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 242 KVYELMRACWQWNPSDRPSFAEI 264
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 362 VGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV 421
V ++ LK +F +LL H++I++FY VCV E L +V + M+ G +
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLT--NLQHEHIVKFYGVCV-EGDPLIMVFEYMKHGDL 102
Query: 422 N--------DLILKSR-----KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
N D +L + +L +++ IA +A G+ +L +RDL ++ L+
Sbjct: 103 NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG 162
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGY-----RWLAPEIIAGDPESVSETWMSNVYS 523
+ V +GD G+ + V Y G+ RW+ PE I + S+V+S
Sbjct: 163 ENLLVKIGDFGM---SRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTE----SDVWS 215
Query: 524 FGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
G+V+WE+ T G+ + S + I G + P+ CPQ + LM+ CW P R
Sbjct: 216 LGVVLWEIFTYGKQPWYQLSNNEVIECITQ-GRVLQRPRTCPQEVYELMLGCWQREPHMR 274
Query: 583 PQFSEIISLLLRTNNISNSS 602
I +LL N++ +S
Sbjct: 275 KNIKGIHTLL---QNLAKAS 291
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR---------VGIEKLKGCDKGNAYEFELRKDLLEL 387
+ + +E IG F V++G V I+ K C + E + ++ L +
Sbjct: 35 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTM 93
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEG 446
H +I++ V + EN + ++ +L G + + ++ L +I A ++
Sbjct: 94 RQFDHPHIVKLIGV-ITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 151
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLA 502
+ +L +RD+ ++ +L+ + V LGD G+ + + ++T Y+ +W+A
Sbjct: 152 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL---SRYMEDSTYYKASKGKLPIKWMA 208
Query: 503 PEIIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA-----VGIAACGLR 556
PE I S S+ WM FG+ +WE++ P Q +G G R
Sbjct: 209 PESINFRRFTSASDVWM-----FGVCMWEILM-----HGVKPFQGVKNNDVIGRIENGER 258
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
+P +CP L SLM KCW PS+RP+F+E+
Sbjct: 259 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 67 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 125
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +RDL ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 185 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 239
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 68
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 69 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +RDL ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 128 YLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESL 186
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 187 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 241
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 242 KVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR---------VGIEKLKGCDKGNAYEFELRKDLLEL 387
+ + +E IG F V++G V I+ K C + E + ++ L +
Sbjct: 10 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTM 68
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEG 446
H +I++ V + EN + ++ +L G + + ++ L +I A ++
Sbjct: 69 RQFDHPHIVKLIGV-ITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 126
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLA 502
+ +L +RD+ ++ +L+ + V LGD G+ + + ++T Y+ +W+A
Sbjct: 127 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL---SRYMEDSTYYKASKGKLPIKWMA 183
Query: 503 PEIIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA-----VGIAACGLR 556
PE I S S+ WM FG+ +WE++ P Q +G G R
Sbjct: 184 PESINFRRFTSASDVWM-----FGVCMWEILM-----HGVKPFQGVKNNDVIGRIENGER 233
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
+P +CP L SLM KCW PS+RP+F+E+
Sbjct: 234 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 36/261 (13%)
Query: 348 IGPNSFKGVYKG---------KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQF 398
IG F V++G V I+ K C + E + ++ L + H +I++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHPHIVKL 456
Query: 399 YCVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAY 457
V + EN + ++ +L G + + ++ L +I A ++ + +L +
Sbjct: 457 IGV-ITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 458 RDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEIIAGDP-ES 512
RD+ ++ +L+ + V LGD G+ + + ++T Y+ +W+APE I S
Sbjct: 515 RDIAARNVLVSSNDCVKLGDFGL---SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 513 VSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA-----VGIAACGLRPEIPKDCPQIL 567
S+ WM FG+ +WE++ P Q +G G R +P +CP L
Sbjct: 572 ASDVWM-----FGVCMWEILM-----HGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 621
Query: 568 KSLMIKCWNNSPSKRPQFSEI 588
SLM KCW PS+RP+F+E+
Sbjct: 622 YSLMTKCWAYDPSRRPRFTEL 642
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR---------VGIEKLKGCDKGNAYEFELRKDLLEL 387
+ + +E IG F V++G V I+ K C + E + ++ L +
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTM 65
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEG 446
H +I++ V + EN + ++ +L G + + ++ L +I A ++
Sbjct: 66 RQFDHPHIVKLIGV-ITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLA 502
+ +L +RD+ ++ +L+ + V LGD G+ + + ++T Y+ +W+A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL---SRYMEDSTYYKASKGKLPIKWMA 180
Query: 503 PEIIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA-----VGIAACGLR 556
PE I S S+ WM FG+ +WE++ P Q +G G R
Sbjct: 181 PESINFRRFTSASDVWM-----FGVCMWEILM-----HGVKPFQGVKNNDVIGRIENGER 230
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
+P +CP L SLM KCW PS+RP+F+E+
Sbjct: 231 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 121/292 (41%), Gaps = 40/292 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD-------KGNAYEFELRKDLLE 386
+W D L+ +G +F V + GI+K C K A E R + E
Sbjct: 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 117
Query: 387 L---MTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L + GH N++ C L V+ + + G+++ + R
Sbjct: 118 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 177
Query: 431 ----LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS 486
L + +I + VA+G++FL +RDL ++ ILL V + D G+ +
Sbjct: 178 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RD 234
Query: 487 VGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
+ + +Y G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 235 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPG 290
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 291 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 121/292 (41%), Gaps = 40/292 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD-------KGNAYEFELRKDLLE 386
+W D L+ +G +F V + GI+K C K A E R + E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 387 L---MTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L + GH N++ C L V+ + + G+++ + R
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 431 ----LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS 486
L + +I + VA+G++FL +RDL ++ ILL V + D G+ +
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RD 197
Query: 487 VGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
+ + +Y G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 198 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPG 253
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR---------VGIEKLKGCDKGNAYEFELRKDLLEL 387
+ + +E IG F V++G V I+ K C + E + ++ L +
Sbjct: 9 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTM 67
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEG 446
H +I++ V + EN + ++ +L G + + ++ L +I A ++
Sbjct: 68 RQFDHPHIVKLIGV-ITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 125
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLA 502
+ +L +RD+ ++ +L+ + V LGD G+ + + ++T Y+ +W+A
Sbjct: 126 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL---SRYMEDSTYYKASKGKLPIKWMA 182
Query: 503 PEIIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA-----VGIAACGLR 556
PE I S S+ WM FG+ +WE++ P Q +G G R
Sbjct: 183 PESINFRRFTSASDVWM-----FGVCMWEILM-----HGVKPFQGVKNNDVIGRIENGER 232
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
+P +CP L SLM KCW PS+RP+F+E+
Sbjct: 233 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 30/193 (15%)
Query: 411 VVTKLMEGGSVNDLILKSR------KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQR 464
V+ M+ G ++ +L SR L + ++R +D+A G+++L+ +RDL ++
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARN 167
Query: 465 ILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR----------WLAPEIIAGDPESVS 514
+L VC+ D G+ Y D YR WLA E +A + +V
Sbjct: 168 CMLAEDMTVCVADFGLSRKI--------YSGDYYRQGCASKLPVKWLALESLADNLYTVH 219
Query: 515 ETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIK 573
S+V++FG+ +WE++T G+ YA + + G R + P +C + + LM +
Sbjct: 220 ----SDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG-GNRLKQPPECMEEVYDLMYQ 274
Query: 574 CWNNSPSKRPQFS 586
CW+ P +RP F+
Sbjct: 275 CWSADPKQRPSFT 287
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR---------VGIEKLKGCDKGNAYEFELRKDLLEL 387
+ + +E IG F V++G V I+ K C + E + ++ L +
Sbjct: 4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTM 62
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEG 446
H +I++ V + EN + ++ +L G + + ++ L +I A ++
Sbjct: 63 RQFDHPHIVKLIGV-ITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLA 502
+ +L +RD+ ++ +L+ + V LGD G+ + + ++T Y+ +W+A
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL---SRYMEDSTYYKASKGKLPIKWMA 177
Query: 503 PEIIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA-----VGIAACGLR 556
PE I S S+ WM FG+ +WE++ P Q +G G R
Sbjct: 178 PESINFRRFTSASDVWM-----FGVCMWEILM-----HGVKPFQGVKNNDVIGRIENGER 227
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
+P +CP L SLM KCW PS+RP+F+E+
Sbjct: 228 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 121/292 (41%), Gaps = 40/292 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD-------KGNAYEFELRKDLLE 386
+W D L+ +G +F V + GI+K C K A E R + E
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 82
Query: 387 L---MTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L + GH N++ C L V+ + + G+++ + R
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDL 142
Query: 431 ----LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS 486
L + +I + VA+G++FL +RDL ++ ILL V + D G+ +
Sbjct: 143 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RD 199
Query: 487 VGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
+ + +Y G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 200 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPG 255
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 256 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR---------VGIEKLKGCDKGNAYEFELRKDLLEL 387
+ + +E IG F V++G V I+ K C + E + ++ L +
Sbjct: 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEALTM 70
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEG 446
H +I++ V + EN + ++ +L G + + ++ L +I A ++
Sbjct: 71 RQFDHPHIVKLIGV-ITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 128
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLA 502
+ +L +RD+ ++ +L+ + V LGD G+ + + ++T Y+ +W+A
Sbjct: 129 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL---SRYMEDSTYYKASKGKLPIKWMA 185
Query: 503 PEIIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA-----VGIAACGLR 556
PE I S S+ WM FG+ +WE++ P Q +G G R
Sbjct: 186 PESINFRRFTSASDVWM-----FGVCMWEILM-----HGVKPFQGVKNNDVIGRIENGER 235
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
+P +CP L SLM KCW PS+RP+F+E+
Sbjct: 236 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 67 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 125
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +RDL ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 185 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 239
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 27/260 (10%)
Query: 348 IGPNSFKGVYKGKRV---------GIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQF 398
IG F VY G+ + I+ L + E LR+ LL + H N+L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLL-MRGLNHPNVLAL 87
Query: 399 YCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQT-KEIIRIAIDVAEGIKFLNDHGVAY 457
+ + V+ M G + I ++ T K++I + VA G+++L + +
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVH 147
Query: 458 RDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR-------WLAPEIIAGDP 510
RDL ++ +LD V + D G+ + + + Y +R W A E +
Sbjct: 148 RDLAARNCMLDESFTVKVADFGL---ARDILDREYYSVQQHRHARLPVKWTALESL---- 200
Query: 511 ESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKS 569
++ T S+V+SFG+++WE++T G Y P +A G R P+ CP L
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ-GRRLPQPEYCPDSLYQ 259
Query: 570 LMIKCWNNSPSKRPQFSEII 589
+M +CW P+ RP F ++
Sbjct: 260 VMQQCWEADPAVRPTFRVLV 279
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 13/262 (4%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 67
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 68 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 126
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK-SVGEATEYETDGYRWLAPEIIA 507
+L +RDL ++ L+ + V + D G+ A +W APE +A
Sbjct: 127 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLA 186
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI 566
+ S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 187 YNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPEK 241
Query: 567 LKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 242 VYELMRACWQWNPSDRPSFAEI 263
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 24/252 (9%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENH-GLCVVTKLME 417
G+ V ++ LK D G + ++++ L T H++I+++ C D+ L +V + +
Sbjct: 43 GEMVAVKALKA-DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 418 GGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGD 477
GS+ D L + +++ A + EG+ +L+ +R+L ++ +LLD V +GD
Sbjct: 102 LGSLRD-YLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGD 160
Query: 478 MGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
G+ A E DG W APE + + + S+V+SFG+ ++E++T
Sbjct: 161 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECL----KEYKFYYASDVWSFGVTLYELLTH 216
Query: 535 -EAAYAACSPVQAAVGIAAC-------------GLRPEIPKDCPQILKSLMIKCWNNSPS 580
+++ + + +GIA G R P CP + LM CW S
Sbjct: 217 CDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEAS 276
Query: 581 KRPQFSEIISLL 592
RP F +I +L
Sbjct: 277 FRPTFENLIPIL 288
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 13/262 (4%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 68
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 69 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK-SVGEATEYETDGYRWLAPEIIA 507
+L +RDL ++ L+ + V + D G+ A +W APE +A
Sbjct: 128 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLA 187
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI 566
+ S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 188 YNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPEK 242
Query: 567 LKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 243 VYELMRACWQWNPSDRPSFAEI 264
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 121/292 (41%), Gaps = 40/292 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD-------KGNAYEFELRKDLLE 386
+W D L+ +G +F V + GI+K C K A E R + E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 387 L---MTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L + GH N++ C L V+T+ + G+++ + R
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 431 ----LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS 486
L + +I + VA+G++FL +RDL ++ ILL V + D G+ +
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RD 188
Query: 487 VGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
+ + + G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 189 IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPG 244
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 22/269 (8%)
Query: 337 LNSDNLEF--------IDQIGPNSF------KGVYKGKRVGIEKLKGCDKGNAYEFELRK 382
L ++NL F + +IG SF K G++ I+++ + E R+
Sbjct: 13 LGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRR 72
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLI--LKSRKLQTKEIIRIA 440
++ L H NI+Q Y +EN L +V EGG + I K Q +I+
Sbjct: 73 EVAVLANMKHPNIVQ-YRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+ + +K ++D + +RD+ SQ I L + G V LGD GI S E +
Sbjct: 132 VQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYY 191
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP 560
L+PEI P + S++++ G V++E+ T + A+ A S + I + G P +
Sbjct: 192 LSPEICENKPYNNK----SDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS-GSFPPVS 246
Query: 561 KDCPQILKSLMIKCWNNSPSKRPQFSEII 589
L+SL+ + + +P RP + I+
Sbjct: 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 273
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 274 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 332
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +R+L ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 333 YLEKKNFIHRNLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESL 391
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 392 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 446
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 447 KVYELMRACWQWNPSDRPSFAEI 469
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 36/261 (13%)
Query: 348 IGPNSFKGVYKG---------KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQF 398
IG F V++G V I+ K C + E + ++ L + H +I++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEALTMRQFDHPHIVKL 456
Query: 399 YCVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAY 457
V + EN + ++ +L G + + ++ L +I A ++ + +L +
Sbjct: 457 IGV-ITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 458 RDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLAPEIIAGDP-ES 512
RD+ ++ +L+ V LGD G+ + + ++T Y+ +W+APE I S
Sbjct: 515 RDIAARNVLVSATDCVKLGDFGL---SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 513 VSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA-----VGIAACGLRPEIPKDCPQIL 567
S+ WM FG+ +WE++ P Q +G G R +P +CP L
Sbjct: 572 ASDVWM-----FGVCMWEILMH-----GVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL 621
Query: 568 KSLMIKCWNNSPSKRPQFSEI 588
SLM KCW PS+RP+F+E+
Sbjct: 622 YSLMTKCWAYDPSRRPRFTEL 642
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 22/267 (8%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKG------KRVGIE---KLKGCDKGNAYEFELRKDLLE 386
+L L+ + +G +F VYKG + V I K+ G E + L
Sbjct: 34 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI 93
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAE 445
+ + H ++++ VC+ + +VT+LM G + + + + + + ++ ++ + +A+
Sbjct: 94 MASMDHPHLVRLLGVCLSPT--IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAK 151
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWL 501
G+ +L + + +RDL ++ +L+ +V + D G+ + G+ EY DG +W+
Sbjct: 152 GMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE--GDEKEYNADGGKMPIKWM 209
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPK 561
A E I T S+V+S+G+ IWE++T P + + G R P
Sbjct: 210 ALECI----HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPP 265
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEI 588
C + +M+KCW RP+F E+
Sbjct: 266 ICTIDVYMVMVKCWMIDADSRPKFKEL 292
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 125/273 (45%), Gaps = 15/273 (5%)
Query: 324 TVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-L 380
TV +W + ++ ++G + VY+G K+ + K + E E
Sbjct: 243 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 302
Query: 381 RKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--R 438
K+ + H N++Q VC E ++T+ M G++ D + + + + ++
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 361
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY 498
+A ++ +++L +R+L ++ L+ + V + D G+ + + T + +
Sbjct: 362 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKF 420
Query: 499 --RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGL 555
+W APE +A + S+ S+V++FG+++WE+ T G + Y Q +
Sbjct: 421 PIKWTAPESLAYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDY 475
Query: 556 RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
R E P+ CP+ + LM CW +PS RP F+EI
Sbjct: 476 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 37/289 (12%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDK---------GNAYEFELRKDL 384
+W +NL+F +G +F V + G+ K K +A E E
Sbjct: 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 385 LELMTC--GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQT--------- 433
L++M+ H+NI+ C L + G +N L KSR L+T
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 434 ----KEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGE 489
++++ + VA+G+ FL +RD+ ++ +LL +GD G+ + +
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL---ARDIMN 216
Query: 490 ATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSP 543
+ Y G +W+APE I +V S+V+S+G+++WE+ + G Y
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQ----SDVWSYGILLWEIFSLGLNPYPGILV 272
Query: 544 VQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G + P P+ + S+M CW P+ RP F +I S L
Sbjct: 273 NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 37/289 (12%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDK---------GNAYEFELRKDL 384
+W +NL+F +G +F V + G+ K K +A E E
Sbjct: 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 385 LELMTC--GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQT--------- 433
L++M+ H+NI+ C L + G +N L KSR L+T
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 434 ----KEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGE 489
++++ + VA+G+ FL +RD+ ++ +LL +GD G+ + +
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL---ARDIMN 216
Query: 490 ATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSP 543
+ Y G +W+APE I +V S+V+S+G+++WE+ + G Y
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQ----SDVWSYGILLWEIFSLGLNPYPGILV 272
Query: 544 VQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G + P P+ + S+M CW P+ RP F +I S L
Sbjct: 273 NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 22/267 (8%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKG------KRVGIE---KLKGCDKGNAYEFELRKDLLE 386
+L L+ + +G +F VYKG + V I K+ G E + L
Sbjct: 11 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI 70
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAE 445
+ + H ++++ VC+ + +VT+LM G + + + + + + ++ ++ + +A+
Sbjct: 71 MASMDHPHLVRLLGVCLSPT--IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAK 128
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWL 501
G+ +L + + +RDL ++ +L+ +V + D G+ + G+ EY DG +W+
Sbjct: 129 GMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE--GDEKEYNADGGKMPIKWM 186
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPK 561
A E I T S+V+S+G+ IWE++T P + + G R P
Sbjct: 187 ALECI----HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPP 242
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEI 588
C + +M+KCW RP+F E+
Sbjct: 243 ICTIDVYMVMVKCWMIDADSRPKFKEL 269
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 24/252 (9%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENH-GLCVVTKLME 417
G+ V ++ LK D G + ++++ L T H++I+++ C D+ L +V + +
Sbjct: 43 GEMVAVKALKA-DCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 418 GGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGD 477
GS+ D L + +++ A + EG+ +L+ +R+L ++ +LLD V +GD
Sbjct: 102 LGSLRD-YLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGD 160
Query: 478 MGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
G+ A E DG W APE + + + S+V+SFG+ ++E++T
Sbjct: 161 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECL----KEYKFYYASDVWSFGVTLYELLTH 216
Query: 535 -EAAYAACSPVQAAVGIAAC-------------GLRPEIPKDCPQILKSLMIKCWNNSPS 580
+++ + + +GIA G R P CP + LM CW S
Sbjct: 217 CDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEAS 276
Query: 581 KRPQFSEIISLL 592
RP F +I +L
Sbjct: 277 FRPTFENLIPIL 288
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 211 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 270
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++T+ M G++ D + + + + ++ +A ++ ++
Sbjct: 271 KHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 329
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +R+L ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 330 YLEKKNFIHRNLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESL 388
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 389 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 443
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 444 KVYELMRACWQWNPSDRPSFAEI 466
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 123/269 (45%), Gaps = 15/269 (5%)
Query: 328 GGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDL 384
G +W + ++ ++G + VY+G K+ + K + E E K+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAID 442
+ H N++Q VC E ++ + M G++ D + + + + ++ +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RW 500
++ +++L +RDL ++ L+ + V + D G+ + + T + + +W
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKW 178
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
APE +A + S+ S+V++FG+++WE+ T G + Y Q + R E
Sbjct: 179 TAPESLAYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMER 233
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
P+ CP+ + LM CW +PS RP F+EI
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKG---------KRVGIEKLKGCDKGNAYEFELRKDLLEL 387
+ + +E IG F V++G V I+ K C + E + ++ L +
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEALTM 65
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEG 446
H +I++ V + EN + ++ +L G + + ++ L +I A ++
Sbjct: 66 RQFDHPHIVKLIGV-ITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLA 502
+ +L +RD+ ++ +L+ V LGD G+ + + ++T Y+ +W+A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSATDCVKLGDFGL---SRYMEDSTYYKASKGKLPIKWMA 180
Query: 503 PEIIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA-----VGIAACGLR 556
PE I S S+ WM FG+ +WE++ P Q +G G R
Sbjct: 181 PESINFRRFTSASDVWM-----FGVCMWEILMH-----GVKPFQGVKNNDVIGRIENGER 230
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
+P +CP L SLM KCW PS+RP+F+E+
Sbjct: 231 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 123/269 (45%), Gaps = 15/269 (5%)
Query: 328 GGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDL 384
G +W + ++ ++G + VY+G K+ + K + E E K+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 60
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAID 442
+ H N++Q VC E ++ + M G++ D + + + + ++ +A
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RW 500
++ +++L +RDL ++ L+ + V + D G+ + + T + + +W
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKW 178
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
APE +A + S+ S+V++FG+++WE+ T G + Y Q + R E
Sbjct: 179 TAPESLAYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMER 233
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
P+ CP+ + LM CW +PS RP F+EI
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 36/288 (12%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY--EFELRKD 383
+W D L +G +F V + GI+K +K +G + L +
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 80
Query: 384 LLELMTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L L+ GH N++ C L V+ + + G+++ + R
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L + +I + VA+G++FL +RDL ++ ILL V + D G+ + + +
Sbjct: 141 LTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL---ARDIYKD 197
Query: 491 TEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPV 544
+Y G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 198 PDYVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPGVKID 253
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 254 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 15/266 (5%)
Query: 330 EEIGRWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLE 386
+ + +W + ++ ++G + VY G K+ + K + E E K+
Sbjct: 22 QSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 81
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVA 444
+ H N++Q VC E +VT+ M G++ D + + + + ++ +A ++
Sbjct: 82 MKEIKHPNLVQLLGVCTLEP-PFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQIS 140
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
+++L +RDL ++ L+ + V + D G+ + + T + + +W A
Sbjct: 141 SAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTA 199
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE +A + S+ S+V++FG+++WE+ T G + Y Q + G R E P+
Sbjct: 200 PESLAYNTFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YDLLEKGYRMEQPE 254
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSE 587
CP + LM CW SP+ RP F+E
Sbjct: 255 GCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 21/277 (7%)
Query: 326 QSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLKGCDKGNAYEFEL 380
Q+ G W + ++L ++G F V+ G RV I+ LK GN
Sbjct: 171 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGNMSPEAF 227
Query: 381 RKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKEIIR 438
++ + H+ ++Q Y V +E + +VT+ M GS+ D + + L+ +++
Sbjct: 228 LQEAQVMKKLRHEKLVQLYAVVSEEP--IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 285
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY 498
+A +A G+ ++ +RDL + IL+ + + D G+ + E T + +
Sbjct: 286 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIED-NEYTARQGAKF 344
Query: 499 --RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGL 555
+W APE ++ S+V+SFG+++ E+ T G Y + + G
Sbjct: 345 PIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GY 399
Query: 556 RPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
R P +CP+ L LM +CW P +RP F + + L
Sbjct: 400 RMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 436
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 24/270 (8%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L L + +G +F VYKG V I+ L+ A + E+ +
Sbjct: 13 ILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK-EILDEAY 71
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ G + + +C+ L VT+LM G + D + ++R +L +++++ + +A
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQL--VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIA 129
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + TEY DG +W
Sbjct: 130 KGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI--DETEYHADGGKVPIKW 187
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP 560
+A E I T S+V+S+G+ +WE++T A P + + G R P
Sbjct: 188 MALESIL----RRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQP 243
Query: 561 KDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
C + +M+KCW RP+F E++S
Sbjct: 244 PICTIDVYMIMVKCWMIDSECRPRFRELVS 273
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 27/280 (9%)
Query: 326 QSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY--E 377
Q+ G W + ++L ++G F V+ G RV I+ LK G A+ E
Sbjct: 170 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 229
Query: 378 FELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKE 435
++ K L H+ ++Q Y V +E + +VT+ M GS+ D + + L+ +
Sbjct: 230 AQVMKKL------RHEKLVQLYAVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 436 IIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET 495
++ +A +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQG 340
Query: 496 DGY--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAA 552
+ +W APE ++ S+V+SFG+++ E+ T G Y + +
Sbjct: 341 AKFPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 553 CGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
G R P +CP+ L LM +CW P +RP F + + L
Sbjct: 397 -GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 27/280 (9%)
Query: 326 QSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY--E 377
Q+ G W + ++L ++G F V+ G RV I+ LK G A+ E
Sbjct: 170 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 229
Query: 378 FELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKE 435
++ K L H+ ++Q Y V +E + +VT+ M GS+ D + + L+ +
Sbjct: 230 AQVMKKL------RHEKLVQLYAVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 436 IIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET 495
++ +A +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQG 340
Query: 496 DGY--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAA 552
+ +W APE ++ S+V+SFG+++ E+ T G Y + +
Sbjct: 341 AKFPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 553 CGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
G R P +CP+ L LM +CW P +RP F + + L
Sbjct: 397 -GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + ++L ++G F V+ G RV I+ LK G A+ E ++ K L
Sbjct: 3 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-- 60
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKEIIRIAIDVA 444
H+ ++Q Y V +E + +VT+ M GS+ D + + L+ +++ +A +A
Sbjct: 61 ----RHEKLVQLYAVVSEEP--IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 114
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
G+ ++ +RDL + IL+ + + D G+ + E T + + +W A
Sbjct: 115 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEXTARQGAKFPIKWTA 173
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE ++ S+V+SFG+++ E+ T G Y + + G R P
Sbjct: 174 PEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPP 228
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM +CW P +RP F + + L
Sbjct: 229 ECPESLHDLMCQCWRKEPEERPTFEYLQAFL 259
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 67
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++ + M G++ D + + + + ++ +A ++ ++
Sbjct: 68 KHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 126
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +RDL ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 127 YLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTXTAHAGAKFPIKWTAPESL 185
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 186 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 240
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 241 KVYELMRACWQWNPSDRPSFAEI 263
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + ++L ++G F V+ G RV I+ LK G A+ E ++ K L
Sbjct: 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLR- 320
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKEIIRIAIDVA 444
H+ ++Q Y V +E + +VT+ M GS+ D + + L+ +++ +A +A
Sbjct: 321 -----HEKLVQLYAVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 373
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
G+ ++ +RDL + IL+ + + D G+ + E T + + +W A
Sbjct: 374 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTA 432
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE ++ S+V+SFG+++ E+ T G Y + + G R P
Sbjct: 433 PEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPP 487
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM +CW P +RP F + + L
Sbjct: 488 ECPESLHDLMCQCWRKEPEERPTFEYLQAFL 518
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 27/281 (9%)
Query: 325 VQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY-- 376
+Q+ G W + ++L ++G F V+ G RV I+ LK G A+
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ 62
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTK 434
E ++ K L H+ ++Q Y V +E + +VT+ M GS+ D + + L+
Sbjct: 63 EAQVMKKL------RHEKLVQLYAVVSEEP--IYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 435 EIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE 494
+++ +A +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQ 173
Query: 495 TDGY--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIA 551
+ +W APE ++ S+V+SFG+++ E+ T G Y + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
G R P +CP+ L LM +CW P +RP F + + L
Sbjct: 230 R-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 15/263 (5%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAYEFE-LRKDLLELMTC 390
+W + ++ ++G + VY+G K+ + K + E E K+ +
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII--RIAIDVAEGIK 448
H N++Q VC E ++ + M G++ D + + + + ++ +A ++ ++
Sbjct: 72 KHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAPEII 506
+L +RDL ++ L+ + V + D G+ + + T + + +W APE +
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHLVKVADFGL-SRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
A + S+ S+V++FG+++WE+ T G + Y Q + R E P+ CP+
Sbjct: 190 AYNKFSIK----SDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMERPEGCPE 244
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+ LM CW +PS RP F+EI
Sbjct: 245 KVYELMRACWQWNPSDRPSFAEI 267
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + ++L ++G F V+ G RV I+ LK G A+ E ++ K L
Sbjct: 6 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-- 63
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKEIIRIAIDVA 444
H+ ++Q Y V +E + +VT+ M GS+ D + + L+ +++ +A +A
Sbjct: 64 ----RHEKLVQLYAVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 117
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
G+ ++ +RDL + IL+ + + D G+ + E T + + +W A
Sbjct: 118 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTA 176
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE ++ S+V+SFG+++ E+ T G Y + + G R P
Sbjct: 177 PEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPP 231
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM +CW P +RP F + + L
Sbjct: 232 ECPESLHDLMCQCWRKEPEERPTFEYLQAFL 262
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 27/281 (9%)
Query: 325 VQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY-- 376
+Q+ G W + ++L ++G F V+ G RV I+ LK G A+
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ 62
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTK 434
E ++ K L H+ ++Q Y V +E + +VT+ M GS+ D + + L+
Sbjct: 63 EAQVMKKL------RHEKLVQLYAVVSEEP--IYIVTEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 435 EIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE 494
+++ +A +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIED-NEYTARQ 173
Query: 495 TDGY--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIA 551
+ +W APE ++ S+V+SFG+++ E+ T G Y + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
G R P +CP+ L LM +CW P +RP F + + L
Sbjct: 230 R-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + ++L ++G F V+ G RV I+ LK G A+ E ++ K L
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-- 59
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKEIIRIAIDVA 444
H+ ++Q Y V +E + +VT+ M GS+ D + + L+ +++ +A +A
Sbjct: 60 ----RHEKLVQLYAVVSEEP--IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 113
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
G+ ++ +RDL + IL+ + + D G+ + E T + + +W A
Sbjct: 114 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTA 172
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE ++ S+V+SFG+++ E+ T G Y + + G R P
Sbjct: 173 PEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPP 227
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM +CW P +RP F + + L
Sbjct: 228 ECPESLHDLMCQCWRKDPEERPTFEYLQAFL 258
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 27/271 (9%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + ++L ++G F V+ G RV I+ LK G A+ E ++ K L
Sbjct: 4 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-- 61
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKEIIRIAIDVA 444
H+ ++Q Y V +E + +VT+ M GS+ D + + L+ +++ +A +A
Sbjct: 62 ----RHEKLVQLYAVVSEEP--IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 115
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLA 502
G+ ++ +RDL + IL+ + + D G+ + E T + + +W A
Sbjct: 116 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTA 174
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPK 561
PE ++ S+V+SFG+++ E+ T G Y + + G R P
Sbjct: 175 PEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPP 229
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+CP+ L LM +CW P +RP F + + L
Sbjct: 230 ECPESLHDLMCQCWRKDPEERPTFEYLQAFL 260
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 112/238 (47%), Gaps = 35/238 (14%)
Query: 381 RKDL---LELMT-CGHKNILQFYCVCVDENHGLCVVTKLMEGGSVND----------LIL 426
RKD EL+T H++I++FY VC D + L +V + M+ G +N +++
Sbjct: 61 RKDFQREAELLTNLQHEHIVKFYGVCGDGD-PLIMVFEYMKHGDLNKFLRAHGPDAMILV 119
Query: 427 KSRKLQTK------EIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI 480
+ Q K +++ IA +A G+ +L +RDL ++ L+ + V +GD G+
Sbjct: 120 DGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGM 179
Query: 481 VTACKSVGEATEYETDGY-----RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-G 534
+ V Y G+ RW+ PE I + S+V+SFG+++WE+ T G
Sbjct: 180 ---SRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTE----SDVWSFGVILWEIFTYG 232
Query: 535 EAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ + S + I G E P+ CP+ + +M+ CW P +R EI +L
Sbjct: 233 KQPWFQLSNTEVIECITQ-GRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 123/278 (44%), Gaps = 21/278 (7%)
Query: 325 VQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLKGCDKGNAYEFE 379
+Q+ G W + ++L ++G F V+ G RV I+ LK G
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEA 59
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKEII 437
++ + H+ ++Q Y V +E + +VT+ M GS+ D + + L+ +++
Sbjct: 60 FLQEAQVMKKIRHEKLVQLYAVVSEEP--IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
+A +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAK 176
Query: 498 Y--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACG 554
+ +W APE ++ S+V+SFG+++ E+ T G Y + + G
Sbjct: 177 FPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-G 231
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
R P +CP+ L LM +CW P +RP F + + L
Sbjct: 232 YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 19/239 (7%)
Query: 357 YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCV--DENHGLCVVTK 414
+ GK+V ++K+ K E L +++ + H N++ Y + DE L VV +
Sbjct: 68 HTGKQVAVKKMD-LRKQQRREL-LFNEVVIMRDYHHDNVVDMYSSYLVGDE---LWVVME 122
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
+EGG++ D++ +R + ++I + + V + +L++ GV +RD+ S ILL G +
Sbjct: 123 FLEGGALTDIVTHTR-MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIK 181
Query: 475 LGDMGI-VTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
L D G K V + Y W+APE+I+ P +++S G+++ EM+
Sbjct: 182 LSDFGFCAQVSKEVPKRKXLVGTPY-WMAPEVISRLPYGTE----VDIWSLGIMVIEMID 236
Query: 534 GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ---ILKSLMIKCWNNSPSKRPQFSEII 589
GE Y P+QA I L P + KD + +L+ + PS+R E++
Sbjct: 237 GEPPYFNEPPLQAMRRIRD-SLPPRV-KDLHKVSSVLRGFLDLMLVREPSQRATAQELL 293
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 120/292 (41%), Gaps = 40/292 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD-------KGNAYEFELRKDLLE 386
+W D L+ +G +F V + GI+K C K A E R + E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 71
Query: 387 L---MTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L + GH N++ C L V+ + + G+++ + R
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 431 ----LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS 486
L + +I + VA+G++FL +RDL ++ ILL V + D G+ +
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RD 188
Query: 487 VGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
+ + + G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 189 IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPG 244
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 33/285 (11%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDK---------GNAYEFELRKDL 384
+W +NL+F +G +F V + G+ K K +A E E
Sbjct: 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 385 LELMTC--GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKS---------RKLQT 433
L++M+ H+NI+ C L + G +N L K+ R L+
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 159
Query: 434 KEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEY 493
++++ + VA+G+ FL +RD+ ++ +LL +GD G+ + + + Y
Sbjct: 160 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL---ARDIMNDSNY 216
Query: 494 ETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAA 547
G +W+APE I T S+V+S+G+++WE+ + G Y
Sbjct: 217 IVKGNARLPVKWMAPESIF----DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 272
Query: 548 VGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G + P P+ + S+M CW P+ RP F +I S L
Sbjct: 273 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 317
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 120/285 (42%), Gaps = 33/285 (11%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDK---------GNAYEFELRKDL 384
+W +NL+F +G +F V + G+ K K +A E E
Sbjct: 32 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 91
Query: 385 LELMTC--GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKS---------RKLQT 433
L++M+ H+NI+ C L + G +N L K+ R L+
Sbjct: 92 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 151
Query: 434 KEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEY 493
++++ + VA+G+ FL +RD+ ++ +LL +GD G+ + + + Y
Sbjct: 152 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL---ARDIMNDSNY 208
Query: 494 ETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAA 547
G +W+APE I +V S+V+S+G+++WE+ + G Y
Sbjct: 209 IVKGNARLPVKWMAPESIFDCVYTVQ----SDVWSYGILLWEIFSLGLNPYPGILVNSKF 264
Query: 548 VGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G + P P+ + S+M CW P+ RP F +I S L
Sbjct: 265 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 121/290 (41%), Gaps = 38/290 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK--------LKGCDKGNAY--EFELRKD 383
+W D L+ +G +F V + GI+K +K +G + L +
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSE 82
Query: 384 LLELMTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L L+ GH N++ C L V+ + + G+++ + R
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYK 142
Query: 431 --LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG 488
L + +I + VA+G++FL +RDL ++ ILL V + D G+ + +
Sbjct: 143 DFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL---ARDIX 199
Query: 489 EATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACS 542
+ + G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 543 PVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 130/287 (45%), Gaps = 49/287 (17%)
Query: 339 SDNLEFIDQIGPNSF----KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKN 394
+ ++ + QIG + G ++G++V ++ ++ + + ++ + + H+N
Sbjct: 36 AKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFR---ETEIYQTVLMRHEN 92
Query: 395 ILQFYCVCVDENHG---LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
IL F + L ++T E GS+ D LKS L K ++++A G+ L+
Sbjct: 93 ILGFIAADIKGTGSWTQLYLITDYHENGSLYDY-LKSTTLDAKSMLKLAYSSVSGLCHLH 151
Query: 452 DH--------GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE------TDG 497
+A+RDL S+ IL+ ++G C+ D+G+ A K + + E +
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL--AVKFISDTNEVDIPPNTRVGT 209
Query: 498 YRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEM----VTG------EAAYAACSPVQ 545
R++ PE++ + + M+++YSFG+++WE+ V+G + Y P
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269
Query: 546 AAVG-----IAACGLRPEIPK-----DCPQILKSLMIKCWNNSPSKR 582
+ + LRP P +C + + LM +CW ++P+ R
Sbjct: 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR 316
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 120/292 (41%), Gaps = 40/292 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD-------KGNAYEFELRKDLLE 386
+W D L+ +G +F V + GI+K C K A E R + E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 387 L---MTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L + GH N++ C L V+ + + G+++ + R
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 431 ----LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS 486
L + +I + VA+G++FL +RDL ++ ILL V + D G+ +
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RD 197
Query: 487 VGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
+ + + G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 198 IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPG 253
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 119/291 (40%), Gaps = 39/291 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD-------KGNAYEFELRKDLLE 386
+W D L +G +F V + GI+K C K A E R + E
Sbjct: 22 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 81
Query: 387 L---MTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L + GH N++ C L V+ + + G+++ + R
Sbjct: 82 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLY 141
Query: 431 ---LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSV 487
L + +I + VA+G++FL +RDL ++ ILL V + D G+ + +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RDI 198
Query: 488 GEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAAC 541
+ + G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPGV 254
Query: 542 SPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 27/280 (9%)
Query: 326 QSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY--E 377
Q+ G W + ++L ++G F V+ G RV I+ LK G A+ E
Sbjct: 1 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 60
Query: 378 FELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKE 435
++ K L H+ ++Q Y V +E + +VT+ M GS+ D + + L+ +
Sbjct: 61 AQVMKKL------RHEKLVQLYAVVSEEP--IYIVTEYMNKGSLLDFLKGETGKYLRLPQ 112
Query: 436 IIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET 495
++ ++ +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 113 LVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQG 171
Query: 496 DGY--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAA 552
+ +W APE ++ S+V+SFG+++ E+ T G Y + +
Sbjct: 172 AKFPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
Query: 553 CGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
G R P +CP+ L LM +CW P +RP F + + L
Sbjct: 228 -GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 266
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 132/275 (48%), Gaps = 22/275 (8%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFELR---KDLLELMTCG 391
W + + LE + IG F VY G+ G ++ D E +L+ ++++
Sbjct: 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTR 87
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKFL 450
H+N++ F C+ H L ++T L +G ++ ++ ++ L + +IA ++ +G+ +L
Sbjct: 88 HENVVLFMGACMSPPH-LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR----WL---AP 503
+ G+ ++DL S+ + D +G V + D G+ + V +A E D R WL AP
Sbjct: 147 HAKGILHKDLKSKNVFYD-NGKVVITDFGLFS-ISGVLQAGRRE-DKLRIQNGWLCHLAP 203
Query: 504 EIIAGDPESVSETWM-----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPE 558
EII E + S+V++ G + +E+ E + P +A + G++P
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT-QPAEAIIWQMGTGMKPN 262
Query: 559 IPK-DCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ + + + +++ CW +RP F++++ +L
Sbjct: 263 LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKG---------KRVGIEKLKGCDKGNAYEFELRKDLLEL 387
+ + +E IG F V++G V I+ K C + E + ++ L +
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEALTM 65
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEG 446
H +I++ V + EN + ++ +L G + + ++ L +I A ++
Sbjct: 66 RQFDHPHIVKLIGV-ITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRWLA 502
+ +L +RD+ ++ +L+ + V LGD G+ + + ++T + +W+A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL---SRYMEDSTXXKASKGKLPIKWMA 180
Query: 503 PEIIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA-----VGIAACGLR 556
PE I S S+ WM FG+ +WE++ P Q +G G R
Sbjct: 181 PESINFRRFTSASDVWM-----FGVCMWEILM-----HGVKPFQGVKNNDVIGRIENGER 230
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
+P +CP L SLM KCW PS+RP+F+E+
Sbjct: 231 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 24/270 (8%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAYEFELRKDLLELM 388
W + ++++ + ++G F V+ G +V ++ LK G A+ E +L++
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEE--ANLMK-- 62
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR---KLQTKEIIRIAIDVAE 445
T H +++ Y V E + ++T+ M GS+ D LKS K+ ++I + +AE
Sbjct: 63 TLQHDKLVRLYAVVTKE-EPIYIITEFMAKGSLLDF-LKSDEGGKVLLPKLIDFSAQIAE 120
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWLAP 503
G+ ++ +RDL + +L+ + D G+ + E T E + +W AP
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED-NEYTAREGAKFPIKWTAP 179
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKD 562
E I ++ SNV+SFG++++E+VT G+ Y + ++ G R ++
Sbjct: 180 EAINFGCFTIK----SNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQ-GYRMPRMEN 234
Query: 563 CPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
CP L +M CW +RP F + S+L
Sbjct: 235 CPDELYDIMKMCWKEKAEERPTFDYLQSVL 264
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 44/290 (15%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAY-----EFELRKDLLELM 388
+L+ ++++F D IG +F V K K+ G+ + Y + +L L
Sbjct: 21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 80
Query: 389 TCGHK-NILQFYCVCVDENHG-LCVVTKLMEGGSVNDLILKSRKLQT------------- 433
GH NI+ C E+ G L + + G++ D + KSR L+T
Sbjct: 81 KLGHHPNIINLLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 434 ---KEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-----VTACK 485
++++ A DVA G+ +L+ +RDL ++ IL+ + + D G+ V K
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 198
Query: 486 SVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPV 544
++G RW+A E + SV T S+V+S+G+++WE+V+ G Y +
Sbjct: 199 TMGRLP------VRWMAIESLN---YSVYTT-NSDVWSYGVLLWEIVSLGGTPYCGMTCA 248
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
+ + G R E P +C + LM +CW P +RP F++I+ L R
Sbjct: 249 ELYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 297
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 44/290 (15%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAY-----EFELRKDLLELM 388
+L+ ++++F D IG +F V K K+ G+ + Y + +L L
Sbjct: 11 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 70
Query: 389 TCGHK-NILQFYCVCVDENHG-LCVVTKLMEGGSVNDLILKSRKLQT------------- 433
GH NI+ C E+ G L + + G++ D + KSR L+T
Sbjct: 71 KLGHHPNIINLLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 434 ---KEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-----VTACK 485
++++ A DVA G+ +L+ +RDL ++ IL+ + + D G+ V K
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 188
Query: 486 SVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPV 544
++G RW+A E + SV T S+V+S+G+++WE+V+ G Y +
Sbjct: 189 TMGRLP------VRWMAIESLN---YSVYTT-NSDVWSYGVLLWEIVSLGGTPYCGMTCA 238
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
+ + G R E P +C + LM +CW P +RP F++I+ L R
Sbjct: 239 ELYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 287
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 27/280 (9%)
Query: 326 QSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY--E 377
Q+ G W + ++L ++G F V+ G RV I+ LK G A+ E
Sbjct: 1 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 60
Query: 378 FELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKE 435
++ K L H+ ++Q Y V +E + +VT+ M GS+ D + + L+ +
Sbjct: 61 AQVMKKL------RHEKLVQLYAVVSEEP--IYIVTEYMNKGSLLDFLKGETGKYLRLPQ 112
Query: 436 IIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET 495
++ ++ +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 113 LVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEWTARQG 171
Query: 496 DGY--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAA 552
+ +W APE ++ S+V+SFG+++ E+ T G Y + +
Sbjct: 172 AKFPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
Query: 553 CGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
G R P +CP+ L LM +CW P +RP F + + L
Sbjct: 228 -GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 266
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 8 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 66
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L +T+LM G + D + + + + ++ ++ + +A
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQL--ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 124
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
EG+ +L D + +RDL ++ +L+ +V + D G+ K +G E EY +G +
Sbjct: 125 EGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL---AKLLGAEEKEYHAEGGKVPIK 181
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 182 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 236
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 237 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 267
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 120/292 (41%), Gaps = 40/292 (13%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCD-------KGNAYEFELRKDLLE 386
+W D L+ +G +F V + GI+K C K A E R + E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSE 80
Query: 387 L---MTCGHK-NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK------------ 430
L + GH N++ C L V+ + + G+++ + R
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 431 ----LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS 486
L + +I + VA+G++FL +RDL ++ ILL V + D G+ +
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RD 197
Query: 487 VGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAA 540
+ + + G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 198 IYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPG 253
Query: 541 CSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 27/281 (9%)
Query: 325 VQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY-- 376
+Q+ G W + ++L ++G F V+ G RV I+ LK G A+
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ 62
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTK 434
E ++ K L H+ ++Q Y V +E + +VT+ M G + D + + L+
Sbjct: 63 EAQVMKKL------RHEKLVQLYAVVSEEP--IYIVTEYMSKGCLLDFLKGEMGKYLRLP 114
Query: 435 EIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE 494
+++ +A +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQ 173
Query: 495 TDGY--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIA 551
+ +W APE ++ S+V+SFG+++ E+ T G Y + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
G R P +CP+ L LM +CW P +RP F + + L
Sbjct: 230 R-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ +C E +V ++ E G +N + ++R ++ K II + V+ G+K+L +
Sbjct: 432 IVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 489
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPE 511
+RDL ++ +LL + D G+ A ++ + +T G +W APE I
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI----N 545
Query: 512 SVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
+ S+V+SFG+++WE + G+ Y + + G R P CP+ + L
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDL 604
Query: 571 MIKCWNNSPSKRPQFSEIISLLLRT 595
M CW RP F+ + L LR
Sbjct: 605 MNLCWTYDVENRPGFA-AVELRLRN 628
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 27/281 (9%)
Query: 325 VQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY-- 376
+Q+ G W + ++L ++G F V+ G RV I+ LK G A+
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ 62
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTK 434
E ++ K L H+ ++Q Y V +E + +V + M GS+ D + + L+
Sbjct: 63 EAQVMKKL------RHEKLVQLYAVVSEEP--IYIVIEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 435 EIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE 494
+++ +A +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEXTARQ 173
Query: 495 TDGY--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIA 551
+ +W APE ++ S+V+SFG+++ E+ T G Y + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
G R P +CP+ L LM +CW P +RP F + + L
Sbjct: 230 R-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ +C E +V ++ E G +N + ++R ++ K II + V+ G+K+L +
Sbjct: 433 IVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 490
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPE 511
+RDL ++ +LL + D G+ A ++ + +T G +W APE I
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI----N 546
Query: 512 SVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
+ S+V+SFG+++WE + G+ Y + + G R P CP+ + L
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDL 605
Query: 571 MIKCWNNSPSKRPQFSEIISLLLRT 595
M CW RP F+ + L LR
Sbjct: 606 MNLCWTYDVENRPGFA-AVELRLRN 629
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 34/216 (15%)
Query: 392 HKNILQFYCVCVD-ENHGL---CVVTKLMEGGSVNDLILKSR------KLQTKEIIRIAI 441
H N+++ VC++ + G+ V+ M+ G ++ +L SR + + +++ +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR-- 499
D+A G+++L++ +RDL ++ +L VC+ D G+ Y D YR
Sbjct: 155 DIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI--------YSGDYYRQG 206
Query: 500 --------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGI 550
W+A E +A T S+V++FG+ +WE+ T G Y
Sbjct: 207 RIAKMPVKWIAIESLA----DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-HEMYDY 261
Query: 551 AACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
G R + P+DC L +M CW P RP FS
Sbjct: 262 LLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFS 297
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ +C E +V ++ E G +N + ++R ++ K II + V+ G+K+L +
Sbjct: 74 IVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 131
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPE 511
+RDL ++ +LL + D G+ A ++ + +T G +W APE I
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKF 191
Query: 512 SVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
S S+V+SFG+++WE + G+ Y + + G R P CP+ + L
Sbjct: 192 SSK----SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDL 246
Query: 571 MIKCWNNSPSKRPQFSEIISLLLRT 595
M CW RP F+ + L LR
Sbjct: 247 MNLCWTYDVENRPGFA-AVELRLRN 270
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ +C E +V ++ E G +N + ++R ++ K II + V+ G+K+L +
Sbjct: 68 IVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 125
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPE 511
+RDL ++ +LL + D G+ A ++ + +T G +W APE I
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 185
Query: 512 SVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
S S+V+SFG+++WE + G+ Y + + G R P CP+ + L
Sbjct: 186 SSK----SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDL 240
Query: 571 MIKCWNNSPSKRPQFSEIISLLLRT 595
M CW RP F+ + L LR
Sbjct: 241 MNLCWTYDVENRPGFA-AVELRLRN 264
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 27/281 (9%)
Query: 325 VQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY-- 376
+Q+ G W + ++L ++G F V+ G RV I+ LK G A+
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ 62
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTK 434
E ++ K L H+ ++Q Y V +E + +V + M GS+ D + + L+
Sbjct: 63 EAQVMKKL------RHEKLVQLYAVVSEEP--IYIVIEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 435 EIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE 494
+++ +A +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQ 173
Query: 495 TDGY--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIA 551
+ +W APE ++ S+V+SFG+++ E+ T G Y + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
G R P +CP+ L LM +CW P +RP F + + L
Sbjct: 230 R-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ +C E +V ++ E G +N + ++R ++ K II + V+ G+K+L +
Sbjct: 74 IVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 131
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPE 511
+RDL ++ +LL + D G+ A ++ + +T G +W APE I
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 191
Query: 512 SVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
S S+V+SFG+++WE + G+ Y + + G R P CP+ + L
Sbjct: 192 SSK----SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDL 246
Query: 571 MIKCWNNSPSKRPQFSEIISLLLRT 595
M CW RP F+ + L LR
Sbjct: 247 MNLCWTYDVENRPGFA-AVELRLRN 270
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ +C E +V ++ E G +N + ++R ++ K II + V+ G+K+L +
Sbjct: 90 IVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 147
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPE 511
+RDL ++ +LL + D G+ A ++ + +T G +W APE I
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 512 SVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
S S+V+SFG+++WE + G+ Y + + G R P CP+ + L
Sbjct: 208 SSK----SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDL 262
Query: 571 MIKCWNNSPSKRPQFSEIISLLLRT 595
M CW RP F+ + L LR
Sbjct: 263 MNLCWTYDVENRPGFA-AVELRLRN 286
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ +C E +V ++ E G +N + ++R ++ K II + V+ G+K+L +
Sbjct: 90 IVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 147
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPE 511
+RDL ++ +LL + D G+ A ++ + +T G +W APE I
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 512 SVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
S S+V+SFG+++WE + G+ Y + + G R P CP+ + L
Sbjct: 208 SSK----SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDL 262
Query: 571 MIKCWNNSPSKRPQFSEIISLLLRT 595
M CW RP F+ + L LR
Sbjct: 263 MNLCWTYDVENRPGFA-AVELRLRN 286
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ +C E +V ++ E G +N + ++R ++ K II + V+ G+K+L +
Sbjct: 80 IVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 137
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPE 511
+RDL ++ +LL + D G+ A ++ + +T G +W APE I
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 197
Query: 512 SVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
S S+V+SFG+++WE + G+ Y + + G R P CP+ + L
Sbjct: 198 SSK----SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDL 252
Query: 571 MIKCWNNSPSKRPQFSEIISLLLRT 595
M CW RP F+ + L LR
Sbjct: 253 MNLCWTYDVENRPGFA-AVELRLRN 276
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ +C E +V ++ E G +N + ++R ++ K II + V+ G+K+L +
Sbjct: 88 IVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 145
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPE 511
+RDL ++ +LL + D G+ A ++ + +T G +W APE I
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 205
Query: 512 SVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
S S+V+SFG+++WE + G+ Y + + G R P CP+ + L
Sbjct: 206 SSK----SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDL 260
Query: 571 MIKCWNNSPSKRPQFSEIISLLLRT 595
M CW RP F+ + L LR
Sbjct: 261 MNLCWTYDVENRPGFA-AVELRLRN 284
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 27/281 (9%)
Query: 325 VQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY-- 376
+Q+ G W + ++L ++G F V+ G RV I+ LK G A+
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ 62
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTK 434
E ++ K L H+ ++Q Y V +E + +V + M GS+ D + + L+
Sbjct: 63 EAQVMKKL------RHEKLVQLYAVVSEEP--IYIVCEYMSKGSLLDFLKGEMGKYLRLP 114
Query: 435 EIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE 494
+++ +A +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQ 173
Query: 495 TDGY--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIA 551
+ +W APE ++ S+V+SFG+++ E+ T G Y + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
G R P +CP+ L LM +CW P +RP F + + L
Sbjct: 230 R-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ +C E +V ++ E G +N + ++R ++ K II + V+ G+K+L +
Sbjct: 70 IVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN 127
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPE 511
+RDL ++ +LL + D G+ A ++ + +T G +W APE I
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187
Query: 512 SVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
S S+V+SFG+++WE + G+ Y + + G R P CP+ + L
Sbjct: 188 SSK----SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDL 242
Query: 571 MIKCWNNSPSKRPQFSEI 588
M CW RP F+ +
Sbjct: 243 MNLCWTYDVENRPGFAAV 260
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 27/280 (9%)
Query: 326 QSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY--E 377
Q+ G W + ++L ++G F V+ G RV I+ LK G A+ E
Sbjct: 170 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 229
Query: 378 FELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTKE 435
++ K L H+ ++Q Y V +E + +V + M GS+ D + + L+ +
Sbjct: 230 AQVMKKLR------HEKLVQLYAVVSEEP--IYIVGEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 436 IIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET 495
++ +A +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 282 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQG 340
Query: 496 DGY--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAA 552
+ +W APE ++ S+V+SFG+++ E+ T G Y + +
Sbjct: 341 AKFPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 553 CGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
G R P +CP+ L LM +CW P +RP F + + L
Sbjct: 397 -GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 126/271 (46%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 69
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++T+LM G + D + + + + ++ ++ + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTST--VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G+ K +G E EY +G +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL---AKLLGAEEKEYHAEGGKVPIK 184
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 185 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 239
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 240 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 126/271 (46%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 75
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++T+LM G + D + + + + ++ ++ + +A
Sbjct: 76 VMASVDNPHVCRLLGICLTST--VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 133
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G+ K +G E EY +G +
Sbjct: 134 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL---AKLLGAEEKEYHAEGGKVPIK 190
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 191 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 245
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 246 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 276
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 28/272 (10%)
Query: 335 WLLNSDNLEFIDQIGPNSFKGVYKG-----KRVGIEKLK-GCDKGNAY--EFELRKDLLE 386
W + ++++ + ++G F V+ G +V ++ LK G A+ E L K
Sbjct: 8 WEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMK---- 63
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR---KLQTKEIIRIAIDV 443
T H +++ Y V E + ++T+ M GS+ D LKS K+ ++I + +
Sbjct: 64 --TLQHDKLVRLYAVVTRE-EPIYIITEYMAKGSLLDF-LKSDEGGKVLLPKLIDFSAQI 119
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--RWL 501
AEG+ ++ +RDL + +L+ + D G+ + E T E + +W
Sbjct: 120 AEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED-NEYTAREGAKFPIKWT 178
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIP 560
APE I ++ S+V+SFG++++E+VT G+ Y + ++ P +
Sbjct: 179 APEAINFGCFTIK----SDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRV- 233
Query: 561 KDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
++CP L +M CW +RP F + S+L
Sbjct: 234 ENCPDELYDIMKMCWKEKAEERPTFDYLQSVL 265
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 72
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L +T+LM G + D + + + + ++ ++ + +A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQL--ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 188
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 189 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 243
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 244 PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 24/222 (10%)
Query: 385 LELMTC-GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTK--EIIRIAI 441
+++M C H N+L+F V + L +T+ ++GG++ +I KS Q + + A
Sbjct: 58 VKVMRCLEHPNVLKFIGVLYKDKR-LNFITEYIKGGTLRGII-KSMDSQYPWSQRVSFAK 115
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-------------VTACKSVG 488
D+A G+ +L+ + +RDLNS L+ + NV + D G+ + + K
Sbjct: 116 DIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPD 175
Query: 489 EATEYETDGY-RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA 547
Y G W+APE+I G S E +V+SFG+V+ E++ A P
Sbjct: 176 RKKRYTVVGNPYWMAPEMING--RSYDEK--VDVFSFGIVLCEIIGRVNADPDYLPRTMD 231
Query: 548 VGIAACG-LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
G+ G L P +CP + ++C + P KRP F ++
Sbjct: 232 FGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKL 273
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 69
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L +T+LM G + D + + + + ++ ++ + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQL--ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 185
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 186 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 240
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 76
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++T+LM G + D + + + + ++ ++ + +A
Sbjct: 77 VMASVDNPHVCRLLGICLTST--VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 192
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 193 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 247
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 71
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++T+LM G + D + + + + ++ ++ + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTST--VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 187
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 188 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 242
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 243 PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 72
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L +T+LM G + D + + + + ++ ++ + +A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQL--ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 188
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 189 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 243
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 244 PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 94
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++T+LM G + D + + + + ++ ++ + +A
Sbjct: 95 VMASVDNPHVCRLLGICLTST--VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 152
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 153 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 210
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 211 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 265
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 266 PPICTIDVYMIMVKCWMIDADSRPKFRELI 295
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 28/250 (11%)
Query: 362 VGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV 421
V ++ LK + +F+ +LL ++ H++I++F+ VC E L +V + M G +
Sbjct: 74 VAVKALKEASESARQDFQREAELLTMLQ--HQHIVRFFGVCT-EGRPLLMVFEYMRHGDL 130
Query: 422 NDLI---------------LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRIL 466
N + + L +++ +A VA G+ +L +RDL ++ L
Sbjct: 131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL 190
Query: 467 LDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESV---SETWMSNVYS 523
+ + V +GD G+ S T+Y G R + P I PES+ T S+V+S
Sbjct: 191 VGQGLVVKIGDFGMSRDIYS----TDYYRVGGRTMLP-IRWMPPESILYRKFTTESDVWS 245
Query: 524 FGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
FG+V+WE+ T G+ + S +A I G E P+ CP + ++M CW P +R
Sbjct: 246 FGVVLWEIFTYGKQPWYQLSNTEAIDCITQ-GRELERPRACPPEVYAIMRGCWQREPQQR 304
Query: 583 PQFSEIISLL 592
++ + L
Sbjct: 305 HSIKDVHARL 314
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 125/271 (46%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 63
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L +T+LM G + D + + + + ++ ++ + +A
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQL--ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 121
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G+ K +G E EY +G +
Sbjct: 122 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL---AKLLGAEEKEYHAEGGKVPIK 178
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 179 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 233
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 234 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 264
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 28/250 (11%)
Query: 362 VGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV 421
V ++ LK + +F+ +LL ++ H++I++F+ VC E L +V + M G +
Sbjct: 45 VAVKALKEASESARQDFQREAELLTMLQ--HQHIVRFFGVCT-EGRPLLMVFEYMRHGDL 101
Query: 422 NDLI---------------LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRIL 466
N + + L +++ +A VA G+ +L +RDL ++ L
Sbjct: 102 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL 161
Query: 467 LDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESV---SETWMSNVYS 523
+ + V +GD G+ S T+Y G R + P I PES+ T S+V+S
Sbjct: 162 VGQGLVVKIGDFGMSRDIYS----TDYYRVGGRTMLP-IRWMPPESILYRKFTTESDVWS 216
Query: 524 FGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
FG+V+WE+ T G+ + S +A I G E P+ CP + ++M CW P +R
Sbjct: 217 FGVVLWEIFTYGKQPWYQLSNTEAIDCITQ-GRELERPRACPPEVYAIMRGCWQREPQQR 275
Query: 583 PQFSEIISLL 592
++ + L
Sbjct: 276 HSIKDVHARL 285
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 44/290 (15%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKG--KRVGIEKLKGCDKGNAY-----EFELRKDLLELM 388
+L+ ++++F D IG +F V K K+ G+ + Y + +L L
Sbjct: 18 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 77
Query: 389 TCGHK-NILQFYCVCVDENHG-LCVVTKLMEGGSVNDLILKSRKLQT------------- 433
GH NI+ C E+ G L + + G++ D + KSR L+T
Sbjct: 78 KLGHHPNIINLLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 434 ---KEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-----VTACK 485
++++ A DVA G+ +L+ +R+L ++ IL+ + + D G+ V K
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKK 195
Query: 486 SVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPV 544
++G RW+A E + SV T S+V+S+G+++WE+V+ G Y +
Sbjct: 196 TMGRLP------VRWMAIESLN---YSVYTT-NSDVWSYGVLLWEIVSLGGTPYCGMTCA 245
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
+ + G R E P +C + LM +CW P +RP F++I+ L R
Sbjct: 246 ELYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 294
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 28/250 (11%)
Query: 362 VGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV 421
V ++ LK + +F+ +LL ++ H++I++F+ VC E L +V + M G +
Sbjct: 51 VAVKALKEASESARQDFQREAELLTMLQ--HQHIVRFFGVCT-EGRPLLMVFEYMRHGDL 107
Query: 422 NDLI---------------LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRIL 466
N + + L +++ +A VA G+ +L +RDL ++ L
Sbjct: 108 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL 167
Query: 467 LDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESV---SETWMSNVYS 523
+ + V +GD G+ S T+Y G R + P I PES+ T S+V+S
Sbjct: 168 VGQGLVVKIGDFGMSRDIYS----TDYYRVGGRTMLP-IRWMPPESILYRKFTTESDVWS 222
Query: 524 FGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
FG+V+WE+ T G+ + S +A I G E P+ CP + ++M CW P +R
Sbjct: 223 FGVVLWEIFTYGKQPWYQLSNTEAIDCITQ-GRELERPRACPPEVYAIMRGCWQREPQQR 281
Query: 583 PQFSEIISLL 592
++ + L
Sbjct: 282 HSIKDVHARL 291
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 124/294 (42%), Gaps = 45/294 (15%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDK---------GNAYEFELRKDL 384
+W +NL+F +G +F V + G+ K K +A E E
Sbjct: 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 385 LELMTC--GHKNILQFYCVCVDENHG--LCVVTKLMEGGSVNDLILKSR----------- 429
L++M+ H+NI+ C HG + V+T+ G + + + + R
Sbjct: 100 LKIMSHLGQHENIVNLLGACT---HGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPS 156
Query: 430 -----KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC 484
+L +++++ + VA+G+ FL +RD+ ++ +LL +GD G+
Sbjct: 157 HNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL---A 213
Query: 485 KSVGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAY 538
+ + + Y G +W+APE I T S+V+S+G+++WE+ + G Y
Sbjct: 214 RDIMNDSNYIVKGNARLPVKWMAPESIF----DCVYTVQSDVWSYGILLWEIFSLGLNPY 269
Query: 539 AACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G + P P+ + S+M CW P+ RP F +I S L
Sbjct: 270 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 323
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I +L+ A + E+ +
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANK-EILDEAY 103
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L +T+LM G + D + + + + ++ ++ + +A
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQL--ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 161
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G+ K +G E EY +G +
Sbjct: 162 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL---AKLLGAEEKEYHAEGGKVPIK 218
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 219 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 273
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 274 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H + +C L V + + GG + I K A ++ G++FL+
Sbjct: 78 HPFLTHMFCT-FQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS--VGEATEYETDGY-RWLAPEIIAG 508
G+ YRDL ILLD+ G++ + D G+ CK +G+A E G ++APEI+ G
Sbjct: 137 SKGIVYRDLKLDNILLDKDGHIKIADFGM---CKENMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILK 568
+ S W +SFG++++EM+ G++ + + I P P+ + K
Sbjct: 194 QKYNHSVDW----WSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAK 247
Query: 569 SLMIKCWNNSPSKR 582
L++K + P KR
Sbjct: 248 DLLVKLFVREPEKR 261
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 27/281 (9%)
Query: 325 VQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK-----RVGIEKLK-GCDKGNAY-- 376
+Q+ G W + ++L ++G F V+ G RV I+ LK G A+
Sbjct: 3 MQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ 62
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL--KSRKLQTK 434
E ++ K L H+ ++Q Y V +E + +V + M G + D + + L+
Sbjct: 63 EAQVMKKL------RHEKLVQLYAVVSEEP--IYIVMEYMSKGCLLDFLKGEMGKYLRLP 114
Query: 435 EIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE 494
+++ +A +A G+ ++ +RDL + IL+ + + D G+ + E T +
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQ 173
Query: 495 TDGY--RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIA 551
+ +W APE ++ S+V+SFG+++ E+ T G Y + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIK----SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
G R P +CP+ L LM +CW P +RP F + + L
Sbjct: 230 R-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 392 HKNILQFY--CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKF 449
H+N+++ Y + DE L VV + +EGG++ D++ +R + ++I + + V + +
Sbjct: 207 HENVVEMYNSYLVGDE---LWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSV 262
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-VTACKSVGEATEYETDGYRWLAPEIIAG 508
L+ GV +RD+ S ILL G V L D G K V Y W+APE+I+
Sbjct: 263 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISR 321
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQA 546
P +++S G+++ EMV GE Y P++A
Sbjct: 322 LPYGPE----VDIWSLGIMVIEMVDGEPPYFNEPPLKA 355
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 59/300 (19%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGI----------EKLKGCDKGNAYEFELRKDLLELMT 389
+N+E++ IG +F V++ + G+ K+ + + + +++ +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 390 CGHKNILQFYCVCVDENHGLCVVTKLMEGGSVN-----------------DLILKSR--- 429
+ NI++ VC +C++ + M G +N DL ++R
Sbjct: 107 FDNPNIVKLLGVCA-VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 430 ----KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
L E + IA VA G+ +L++ +RDL ++ L+ + V + D G+ +
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGL---SR 222
Query: 486 SVGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYA 539
++ A Y+ DG RW+ PE I + T S+V+++G+V+WE+ + G Y
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPESIFYN----RYTTESDVWAYGVVLWEIFSYGLQPYY 278
Query: 540 ACSPVQAAV-----GIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
+ + I AC P++CP L +LM CW+ P+ RP F I +L R
Sbjct: 279 GMAHEEVIYYVRDGNILAC------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 332
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 69
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L +T+LM G + D + + + + ++ ++ + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQL--ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G K +G E EY +G +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG---RAKLLGAEEKEYHAEGGKVPIK 184
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 185 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 239
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 240 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 125/271 (46%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 76
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++T+LM G + D + + + + ++ ++ + +A
Sbjct: 77 VMASVDNPHVCRLLGICLTST--VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G K +G E EY +G +
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG---RAKLLGAEEKEYHAEGGKVPIK 191
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 192 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 246
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 247 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 125/271 (46%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 70
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++ +LM G + D + + + + ++ ++ + +A
Sbjct: 71 VMASVDNPHVCRLLGICLTST--VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA 128
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G+ K +G E EY +G +
Sbjct: 129 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL---AKLLGAEEKEYHAEGGKVPIK 185
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 186 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 240
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 241 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 12/263 (4%)
Query: 345 IDQIGPNSFKGVYKG-----KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFY 399
+++IG SF V+KG ++V K+ ++ ++++++ L C + ++Y
Sbjct: 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRD 459
+ + L ++ + + GGS DL L+ L +I I ++ +G+ +L+ +RD
Sbjct: 87 GSYLKDTK-LWIIMEYLGGGSALDL-LEPGPLDETQIATILREILKGLDYLHSEKKIHRD 144
Query: 460 LNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMS 519
+ + +LL HG V L D G+ W+APE+I +S ++ +
Sbjct: 145 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIK---QSAYDS-KA 200
Query: 520 NVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSP 579
+++S G+ E+ GE ++ P++ I P + + + LK + C N P
Sbjct: 201 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEP 259
Query: 580 SKRPQFSEIISLLLRTNNISNSS 602
S RP E++ N +S
Sbjct: 260 SFRPTAKELLKHKFILRNAKKTS 282
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 10/228 (4%)
Query: 371 DKGNAYEFELRKD-LLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR 429
DK F+ D +L + + H +I++ +C L +VT+ + GS+ D + + R
Sbjct: 70 DKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHR 127
Query: 430 -KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG 488
L + ++ + +A+G+ +L +HG+ +R+L ++ +LL V + D G+
Sbjct: 128 GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 187
Query: 489 EATEYE--TDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQA 546
+ Y +W+A E I T S+V+S+G+ +WE++T A A +
Sbjct: 188 KQLLYSEAKTPIKWMALESI----HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE 243
Query: 547 AVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLR 594
+ G R P+ C + +M+KCW + RP F E+ + R
Sbjct: 244 VPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTR 291
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 392 HKNILQFY--CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKF 449
H+N+++ Y + DE L VV + +EGG++ D++ +R + ++I + + V + +
Sbjct: 130 HENVVEMYNSYLVGDE---LWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSV 185
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-VTACKSVGEATEYETDGYRWLAPEIIAG 508
L+ GV +RD+ S ILL G V L D G K V Y W+APE+I+
Sbjct: 186 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISR 244
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI-- 566
P +++S G+++ EMV GE Y P++ A+ + L P + K+ ++
Sbjct: 245 LPYGPE----VDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRL-KNLHKVSP 298
Query: 567 -LKSLMIKCWNNSPSKRPQFSEII 589
LK + + P++R +E++
Sbjct: 299 SLKGFLDRLLVRDPAQRATAAELL 322
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 12/263 (4%)
Query: 345 IDQIGPNSFKGVYKG-----KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFY 399
+++IG SF V+KG ++V K+ ++ ++++++ L C + ++Y
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRD 459
+ + L ++ + + GGS DL L+ L +I I ++ +G+ +L+ +RD
Sbjct: 72 GSYLKDTK-LWIIMEYLGGGSALDL-LEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 460 LNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMS 519
+ + +LL HG V L D G+ W+APE+I +S ++ +
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIK---QSAYDS-KA 185
Query: 520 NVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSP 579
+++S G+ E+ GE ++ P++ I P + + + LK + C N P
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEP 244
Query: 580 SKRPQFSEIISLLLRTNNISNSS 602
S RP E++ N +S
Sbjct: 245 SFRPTAKELLKHKFILRNAKKTS 267
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 371 DKGNAYEFELRKD-LLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR 429
DK F+ D +L + + H +I++ +C + L +VT+ + GS+ D + + R
Sbjct: 52 DKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS--LQLVTQYLPLGSLLDHVRQHR 109
Query: 430 -KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG 488
L + ++ + +A+G+ +L +HG+ +R+L ++ +LL V + D G+
Sbjct: 110 GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169
Query: 489 EATEYE--TDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQ 545
+ Y +W+A E I T S+V+S+G+ +WE++T G YA +
Sbjct: 170 KQLLYSEAKTPIKWMALESI----HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE 225
Query: 546 AAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
+ G R P+ C + +M+KCW + RP F E+
Sbjct: 226 VP-DLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 267
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 392 HKNILQFY--CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKF 449
H+N+++ Y + DE L VV + +EGG++ D++ +R + ++I + + V + +
Sbjct: 87 HENVVEMYNSYLVGDE---LWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSV 142
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-VTACKSVGEATEYETDGYRWLAPEIIAG 508
L+ GV +RD+ S ILL G V L D G K V Y W+APE+I+
Sbjct: 143 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISR 201
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI-- 566
P +++S G+++ EMV GE Y P++ A+ + L P + K+ ++
Sbjct: 202 LPYGPE----VDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRL-KNLHKVSP 255
Query: 567 -LKSLMIKCWNNSPSKRPQFSEII 589
LK + + P++R +E++
Sbjct: 256 SLKGFLDRLLVRDPAQRATAAELL 279
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 392 HKNILQFY--CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKF 449
H+N+++ Y + DE L VV + +EGG++ D++ +R + ++I + + V + +
Sbjct: 85 HENVVEMYNSYLVGDE---LWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSV 140
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-VTACKSVGEATEYETDGYRWLAPEIIAG 508
L+ GV +RD+ S ILL G V L D G K V Y W+APE+I+
Sbjct: 141 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISR 199
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI-- 566
P +++S G+++ EMV GE Y P++ A+ + L P + K+ ++
Sbjct: 200 LPYGPE----VDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRL-KNLHKVSP 253
Query: 567 -LKSLMIKCWNNSPSKRPQFSEII 589
LK + + P++R +E++
Sbjct: 254 SLKGFLDRLLVRDPAQRATAAELL 277
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 73
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++ +LM G + D + + + + ++ ++ + +A
Sbjct: 74 VMASVDNPHVCRLLGICLTST--VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 132 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 189
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 190 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 244
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 245 PPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 71
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++ +LM G + D + + + + ++ ++ + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTST--VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 187
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 188 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 242
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 243 PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 12/263 (4%)
Query: 345 IDQIGPNSFKGVYKG-----KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFY 399
+++IG SF V+KG ++V K+ ++ ++++++ L C + ++Y
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRD 459
+ + L ++ + + GGS DL L+ L +I I ++ +G+ +L+ +RD
Sbjct: 72 GSYLKDTK-LWIIMEYLGGGSALDL-LEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 460 LNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMS 519
+ + +LL HG V L D G+ W+APE+I +S ++ +
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIK---QSAYDS-KA 185
Query: 520 NVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSP 579
+++S G+ E+ GE ++ P++ I P + + + LK + C N P
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEP 244
Query: 580 SKRPQFSEIISLLLRTNNISNSS 602
S RP E++ N +S
Sbjct: 245 SFRPTAKELLKHKFILRNAKKTS 267
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 122/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 70
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L + +LM G + D + + + + ++ ++ + +A
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQL--IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 128
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 129 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 186
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 187 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 241
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 242 PPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 72
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++ +LM G + D + + + + ++ ++ + +A
Sbjct: 73 VMASVDNPHVCRLLGICLTST--VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 188
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 189 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 243
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 244 PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 392 HKNILQFY--CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKF 449
H+N+++ Y + DE L VV + +EGG++ D++ +R + ++I + + V + +
Sbjct: 76 HENVVEMYNSYLVGDE---LWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSV 131
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-VTACKSVGEATEYETDGYRWLAPEIIAG 508
L+ GV +RD+ S ILL G V L D G K V Y W+APE+I+
Sbjct: 132 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISR 190
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI-- 566
P +++S G+++ EMV GE Y P++ A+ + L P + K+ ++
Sbjct: 191 LPYGPE----VDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRL-KNLHKVSP 244
Query: 567 -LKSLMIKCWNNSPSKRPQFSEII 589
LK + + P++R +E++
Sbjct: 245 SLKGFLDRLLVRDPAQRATAAELL 268
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 124/271 (45%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I + +F VYKG V I++L+ A + E+ +
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 69
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L +T+LM G + D + + + + ++ ++ + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQL--ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G+ K +G E EY +G +
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL---AKLLGAEEKEYHAEGGKVPIK 184
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 185 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 239
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 240 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 79
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L +T+LM G + D + + + + ++ ++ + +A
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQL--ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 137
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G+ K +G E EY +G +
Sbjct: 138 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL---AKLLGAEEKEYHAEGGKVPIK 194
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 195 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 249
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M KCW RP+F E+I
Sbjct: 250 QPPICTIDVYMIMRKCWMIDADSRPKFRELI 280
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 122/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 69
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L + +LM G + D + + + + ++ ++ + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQL--IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 185
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 186 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 240
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 30/268 (11%)
Query: 336 LLNSDNLEFID-QIGPNSF----KGVYKGKR----VGIEKLK-GCDKGNAYEFELRKDLL 385
L DNL D ++G +F +GVY+ ++ V I+ LK G +K + E ++
Sbjct: 5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIM 64
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK-LQTKEIIRIAIDVA 444
+ + I++ VC E L +V ++ GG ++ ++ R+ + + + V+
Sbjct: 65 HQLD--NPYIVRLIGVCQAE--ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS 120
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD------GY 498
G+K+L + +RDL ++ +LL + D G+ K++G Y T
Sbjct: 121 MGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGL---SKALGADDSYYTARSAGKWPL 177
Query: 499 RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRP 557
+W APE I S S+V+S+G+ +WE ++ G+ Y + I G R
Sbjct: 178 KWYAPECINFRKFSSR----SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-GKRM 232
Query: 558 EIPKDCPQILKSLMIKCWNNSPSKRPQF 585
E P +CP L +LM CW RP F
Sbjct: 233 ECPPECPPELYALMSDCWIYKWEDRPDF 260
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 392 HKNILQFY--CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKF 449
H+N+++ Y + DE L VV + +EGG++ D++ +R + ++I + + V + +
Sbjct: 80 HENVVEMYNSYLVGDE---LWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALSV 135
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-VTACKSVGEATEYETDGYRWLAPEIIAG 508
L+ GV +RD+ S ILL G V L D G K V Y W+APE+I+
Sbjct: 136 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISR 194
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI-- 566
P +++S G+++ EMV GE Y P++ A+ + L P + K+ ++
Sbjct: 195 LPYGPE----VDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRL-KNLHKVSP 248
Query: 567 -LKSLMIKCWNNSPSKRPQFSEII 589
LK + + P++R +E++
Sbjct: 249 SLKGFLDRLLVRDPAQRATAAELL 272
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 124/271 (45%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I + +F VYKG V I++L+ A + E+ +
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 76
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L +T+LM G + D + + + + ++ ++ + +A
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQL--ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G+ K +G E EY +G +
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL---AKLLGAEEKEYHAEGGKVPIK 191
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 192 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 246
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 247 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 123/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 72
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++T+LM G + D + + + + ++ ++ + +A
Sbjct: 73 VMASVDNPHVCRLLGICLTST--VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 188
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 189 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 243
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M KCW RP+F E+I
Sbjct: 244 PPICTIDVYMIMRKCWMIDADSRPKFRELI 273
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 124/282 (43%), Gaps = 23/282 (8%)
Query: 337 LNSDNLEF-----------IDQIGPNSFKGVYKG-----KRVGIEKLKGCDKGNAYEFEL 380
L ++NL F +++IG SF V+KG ++V K+ ++ ++
Sbjct: 13 LGTENLYFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI 72
Query: 381 RKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
++++ L C + ++Y + + L ++ + + GGS DL L+ L +I I
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTK-LWIIMEYLGGGSALDL-LEPGPLDETQIATIL 130
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
++ +G+ +L+ +RD+ + +LL HG V L D G+ W
Sbjct: 131 REILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFW 190
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP 560
+APE+I +S ++ ++++S G+ E+ GE ++ P++ I P +
Sbjct: 191 MAPEVIK---QSAYDS-KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-PPTLE 245
Query: 561 KDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSS 602
+ + LK + C N PS RP E++ N +S
Sbjct: 246 GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS 287
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 46/298 (15%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDK---------GNAYEFELRKDL 384
+W +NL+F +G +F V + G+ K K +A E E
Sbjct: 25 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 84
Query: 385 LELMTC--GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKS-------------- 428
L++M+ H+NI+ C L + G +N L K+
Sbjct: 85 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDP 144
Query: 429 --------RKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI 480
R L+ ++++ + VA+G+ FL +RD+ ++ +LL +GD G+
Sbjct: 145 EGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 481 VTACKSVGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-G 534
+ + + Y G +W+APE I T S+V+S+G+++WE+ + G
Sbjct: 205 ---ARDIMNDSNYIVKGNARLPVKWMAPESIF----DCVYTVQSDVWSYGILLWEIFSLG 257
Query: 535 EAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
Y + G + P P+ + S+M CW P+ RP F +I S L
Sbjct: 258 LNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 315
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 69
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L +T+LM G + D + + + + ++ ++ + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQL--ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 185
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 186 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 240
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M KCW RP+F E+I
Sbjct: 241 PPICTIDVYMIMRKCWMIDADSRPKFRELI 270
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H + +C L V + + GG + I K A ++ G++FL+
Sbjct: 77 HPFLTHMFCT-FQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 135
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS--VGEATEYETDGY-RWLAPEIIAG 508
G+ YRDL ILLD+ G++ + D G+ CK +G+A G ++APEI+ G
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGM---CKENMLGDAKTNXFCGTPDYIAPEILLG 192
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILK 568
+ S W +SFG++++EM+ G++ + + I P P+ + K
Sbjct: 193 QKYNHSVDW----WSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAK 246
Query: 569 SLMIKCWNNSPSKR 582
L++K + P KR
Sbjct: 247 DLLVKLFVREPEKR 260
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 10/191 (5%)
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVA 444
L L H I++ + D + ++ +EGG + L+ KS++ A +V
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQ-IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 116
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPE 504
+++L+ + YRDL + ILLD++G++ + D G K V + T ++APE
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGF---AKYVPDVTYXLCGTPDYIAPE 173
Query: 505 IIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKD 562
+++ P + S W +SFG++I+EM+ G + + ++ I LR P +D
Sbjct: 174 VVSTKPYNKSIDW----WSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNED 229
Query: 563 CPQILKSLMIK 573
+L L+ +
Sbjct: 230 VKDLLSRLITR 240
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 33/222 (14%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFE-LRKDLL---ELMTC-- 390
L DN EFI +G SF +V + ++K + G+ Y + L+KD++ + + C
Sbjct: 20 LGIDNFEFIRVLGKGSFG------KVMLARVK--ETGDLYAVKVLKKDVILQDDDVECTM 71
Query: 391 ----------GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H + Q +C C L V + + GG + I KSR+ A
Sbjct: 72 TEKRILSLARNHPFLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYA 130
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTA--CKSVGEATEYETDGY 498
++ + FL+D G+ YRDL +LLD G+ L D G+ C V AT T Y
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDY 190
Query: 499 RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
+APEI+ + W ++ G++++EM+ G A + A
Sbjct: 191 --IAPEILQEMLYGPAVDW----WAMGVLLYEMLCGHAPFEA 226
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 124/271 (45%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 71
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++ +LM G + D + + + + ++ ++ + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTST--VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G K +G E EY +G +
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG---RAKLLGAEEKEYHAEGGKVPIK 186
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 187 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 241
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 242 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 73
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L + +LM G + D + + + + ++ ++ + +A
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQL--IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G K +G E EY +G +
Sbjct: 132 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG---RAKLLGAEEKEYHAEGGKVPIK 188
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 189 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 243
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 244 QPPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 124/271 (45%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 71
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++T+LM G + D + + + + ++ ++ + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTST--VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G K +G E EY +G +
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG---RAKLLGAEEKEYHAEGGKVPIK 186
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 187 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 241
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M KCW RP+F E+I
Sbjct: 242 QPPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 392 HKNILQFY-CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H N+++ Y V E L V+ + ++GG++ D++ + R L ++I + V + + +L
Sbjct: 101 HFNVVEMYKSYLVGEE--LWVLMEFLQGGALTDIVSQVR-LNEEQIATVCEAVLQALAYL 157
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGI-VTACKSVGEATEYETDGYRWLAPEIIAGD 509
+ GV +RD+ S ILL G V L D G K V + Y W+APE+I+
Sbjct: 158 HAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPY-WMAPEVIS-- 214
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQA 546
S+ T + +++S G+++ EMV GE Y + SPVQA
Sbjct: 215 -RSLYATEV-DIWSLGIMVIEMVDGEPPYFSDSPVQA 249
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 134/298 (44%), Gaps = 39/298 (13%)
Query: 308 MPLPSSSFVVSVDEWQTVQSGGEEIG--RWLLNSDNLEFID-QIGPNSF----KGVYKGK 360
MP+ +S F ++ S EE+ + L DNL D ++G +F +GVY+ +
Sbjct: 308 MPMDTSVF-------ESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMR 360
Query: 361 R----VGIEKLK-GCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKL 415
+ V I+ LK G +K + E ++ + + I++ VC E L +V ++
Sbjct: 361 KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD--NPYIVRLIGVCQAE--ALMLVMEM 416
Query: 416 MEGGSVNDLILKSRK-LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
GG ++ ++ R+ + + + V+ G+K+L + +R+L ++ +LL
Sbjct: 417 AGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAK 476
Query: 475 LGDMGIVTACKSVGEATEYETD------GYRWLAPEIIAGDPESVSETWMSNVYSFGMVI 528
+ D G+ K++G Y T +W APE I S S+V+S+G+ +
Sbjct: 477 ISDFGL---SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR----SDVWSYGVTM 529
Query: 529 WEMVT-GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQF 585
WE ++ G+ Y + I G R E P +CP L +LM CW RP F
Sbjct: 530 WEALSYGQKPYKKMKGPEVMAFIEQ-GKRMECPPECPPELYALMSDCWIYKWEDRPDF 586
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 41/285 (14%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLL 385
+ +L++I Q+G +F V G V +++L+ +F+ +L
Sbjct: 19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 78
Query: 386 ELMTCGHKN-ILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAID 442
+ + H + I+++ V L +V + + G + D + + R +L ++ +
Sbjct: 79 KAL---HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 135
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC---KSVGEATEYETDGYR 499
+ +G+++L +RDL ++ IL++ +V + D G+ K E
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 195
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAAC------ 553
W APE ++ + S S+V+SFG+V++E+ T +CSP + + C
Sbjct: 196 WYAPESLSDNIFSRQ----SDVWSFGVVLYELFT--YCDKSCSPSAEFLRMMGCERDVPA 249
Query: 554 ----------GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
G R P CP + LM CW SP RP FS +
Sbjct: 250 LSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
+ +++I + VA G++FL+ +RDL ++ ILL + V + D G+ + + +
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLA---RDIYKN 252
Query: 491 TEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPV 544
+Y G +W+APE I S S+V+S+G+++WE+ + G + Y
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTK----SDVWSYGVLLWEIFSLGGSPYPGVQMD 308
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G+R P+ + +M+ CW+ P +RP+F+E++ L
Sbjct: 309 EDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 41/285 (14%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLL 385
+ +L++I Q+G +F V G V +++L+ +F+ +L
Sbjct: 7 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 66
Query: 386 ELMTCGHKN-ILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAID 442
+ + H + I+++ V L +V + + G + D + + R +L ++ +
Sbjct: 67 KAL---HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 123
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC---KSVGEATEYETDGYR 499
+ +G+++L +RDL ++ IL++ +V + D G+ K E
Sbjct: 124 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 183
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAAC------ 553
W APE ++ + S S+V+SFG+V++E+ T +CSP + + C
Sbjct: 184 WYAPESLSDNIFSRQ----SDVWSFGVVLYELFT--YCDKSCSPSAEFLRMMGCERDVPA 237
Query: 554 ----------GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
G R P CP + LM CW SP RP FS +
Sbjct: 238 LCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 282
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 41/285 (14%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLL 385
+ +L++I Q+G +F V G V +++L+ +F+ +L
Sbjct: 3 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 62
Query: 386 ELMTCGHKN-ILQFYCVCVDENHG-LCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAID 442
+ + H + I+++ V L +V + + G + D + + R +L ++ +
Sbjct: 63 KAL---HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 119
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC---KSVGEATEYETDGYR 499
+ +G+++L +RDL ++ IL++ +V + D G+ K E
Sbjct: 120 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF 179
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAAC------ 553
W APE ++ + S S+V+SFG+V++E+ T +CSP + + C
Sbjct: 180 WYAPESLSDNIFSRQ----SDVWSFGVVLYELFT--YCDKSCSPSAEFLRMMGCERDVPA 233
Query: 554 ----------GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
G R P CP + LM CW SP RP FS +
Sbjct: 234 LCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 278
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L + +I + VA+G++FL +RDL ++ ILL V + D G+ + + +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKD 244
Query: 491 TEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPV 544
+Y G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPGVKID 300
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 301 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 121/270 (44%), Gaps = 26/270 (9%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I + +F VYKG V I++L+ A + E+ +
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 76
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ L + +LM G + D + + + + ++ ++ + +A
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQL--IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG----YRW 500
+G+ +L D + +RDL ++ +L+ +V + D G+ + E EY +G +W
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA--EEKEYHAEGGKVPIKW 192
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPEI 559
+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 193 MALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQ 247
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M+KCW RP+F E+I
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L + +I + VA+G++FL +RDL ++ ILL V + D G+ + + +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKD 251
Query: 491 TEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPV 544
+Y G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPGVKID 307
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 308 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L + +I + VA+G++FL +RDL ++ ILL V + D G+ + + +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKD 246
Query: 491 TEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPV 544
+Y G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPGVKID 302
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 303 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 431 LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA 490
L + +I + VA+G++FL +RDL ++ ILL V + D G+ + + +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKD 253
Query: 491 TEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPV 544
+Y G +W+APE I ++ S+V+SFG+++WE+ + G + Y
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQ----SDVWSFGVLLWEIFSLGASPYPGVKID 309
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+ G R P + M+ CW+ PS+RP FSE++ L
Sbjct: 310 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTACKSVGEATEYETDG 497
+ VA+G+ FL +RDL ++ ILL HG + + D G+ + + + Y G
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLA---RHIKNDSNYVVKG 228
Query: 498 -----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIA 551
+W+APE I + T+ S+V+S+G+ +WE+ + G + Y +
Sbjct: 229 NARLPVKWMAPESIF----NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSNR 604
G R P+ P + +M CW+ P KRP F +I+ L+ + IS S+N
Sbjct: 285 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK--QISESTNH 335
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 109/229 (47%), Gaps = 9/229 (3%)
Query: 330 EEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAY-EFELRKDLLE-- 386
E + R L D E I ++G +F VYK + L + E EL ++E
Sbjct: 27 EHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID 86
Query: 387 -LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILK-SRKLQTKEIIRIAIDVA 444
L +C H NI++ EN+ L ++ + GG+V+ ++L+ R L +I +
Sbjct: 87 ILASCDHPNIVKLLDAFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-VTACKSVGEATEYETDGYRWLAP 503
+ + +L+D+ + +RDL + IL G++ L D G+ +++ + Y W+AP
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPY-WMAP 204
Query: 504 EIIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIA 551
E++ + + + ++V+S G+ + EM E + +P++ + IA
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA 253
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTACKSVGEATEYETDG 497
+ VA+G+ FL +RDL ++ ILL HG + + D G+ + + + Y G
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLA---RDIKNDSNYVVKG 221
Query: 498 -----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIA 551
+W+APE I + T+ S+V+S+G+ +WE+ + G + Y +
Sbjct: 222 NARLPVKWMAPESIF----NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 277
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSNR 604
G R P+ P + +M CW+ P KRP F +I+ L+ + IS S+N
Sbjct: 278 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK--QISESTNH 328
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTACKSVGEATEYETDG 497
+ VA+G+ FL +RDL ++ ILL HG + + D G+ + + + Y G
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLA---RDIKNDSNYVVKG 223
Query: 498 -----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIA 551
+W+APE I + T+ S+V+S+G+ +WE+ + G + Y +
Sbjct: 224 NARLPVKWMAPESIF----NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 279
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSNR 604
G R P+ P + +M CW+ P KRP F +I+ L+ + IS S+N
Sbjct: 280 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK--QISESTNH 330
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTACKSVGEATEYETDG 497
+ VA+G+ FL +RDL ++ ILL HG + + D G+ + + + Y G
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLA---RDIKNDSNYVVKG 228
Query: 498 -----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIA 551
+W+APE I + T+ S+V+S+G+ +WE+ + G + Y +
Sbjct: 229 NARLPVKWMAPESIF----NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSNR 604
G R P+ P + +M CW+ P KRP F +I+ L+ + IS S+N
Sbjct: 285 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK--QISESTNH 335
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTACKSVGEATEYETDG 497
+ VA+G+ FL +RDL ++ ILL HG + + D G+ + + + Y G
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLT-HGRITKICDFGLA---RDIKNDSNYVVKG 205
Query: 498 -----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIA 551
+W+APE I + T+ S+V+S+G+ +WE+ + G + Y +
Sbjct: 206 NARLPVKWMAPESIF----NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSNR 604
G R P+ P + +M CW+ P KRP F +I+ L+ + IS S+N
Sbjct: 262 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK--QISESTNH 312
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 106/228 (46%), Gaps = 7/228 (3%)
Query: 330 EEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAY-EFELRKDLLE-- 386
E + R L D E I ++G +F VYK + L + E EL ++E
Sbjct: 27 EHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID 86
Query: 387 -LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILK-SRKLQTKEIIRIAIDVA 444
L +C H NI++ EN+ L ++ + GG+V+ ++L+ R L +I +
Sbjct: 87 ILASCDHPNIVKLLDAFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPE 504
+ + +L+D+ + +RDL + IL G++ L D G+ + + W+APE
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPE 205
Query: 505 IIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIA 551
++ + + + ++V+S G+ + EM E + +P++ + IA
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA 253
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 123/271 (45%), Gaps = 28/271 (10%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGK----------RVGIEKLKGCDKGNAYEFELRKDLL 385
+L + I +G +F VYKG V I++L+ A + E+ +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAY 71
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVA 444
+ + + ++ + +C+ + ++ +LM G + D + + + + ++ ++ + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTST--VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG----YR 499
+G+ +L D + +RDL ++ +L+ +V + D G K +G E EY +G +
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG---RAKLLGAEEKEYHAEGGKVPIK 186
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT-GEAAYAACSPVQAAVGIAACGLRPE 558
W+A E I T S+V+S+G+ +WE++T G Y P I G R
Sbjct: 187 WMALESILHR----IYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLP 241
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P C + +M KCW RP+F E+I
Sbjct: 242 QPPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 106/228 (46%), Gaps = 7/228 (3%)
Query: 330 EEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAY-EFELRKDLLE-- 386
E + R L D E I ++G +F VYK + L + E EL ++E
Sbjct: 27 EHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID 86
Query: 387 -LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILK-SRKLQTKEIIRIAIDVA 444
L +C H NI++ EN+ L ++ + GG+V+ ++L+ R L +I +
Sbjct: 87 ILASCDHPNIVKLLDAFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPE 504
+ + +L+D+ + +RDL + IL G++ L D G+ + + W+APE
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPE 205
Query: 505 IIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIA 551
++ + + + ++V+S G+ + EM E + +P++ + IA
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA 253
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 118/256 (46%), Gaps = 17/256 (6%)
Query: 342 LEFIDQIGPNSFKGVYKG--KRVG-IEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQF 398
+ ++++G S+ VYK K G I +K + + E+ K++ + C +++++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-EIIKEISIMQQCDSPHVVKY 89
Query: 399 YCVCVDENHGLCVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAY 457
Y +N L +V + GSV+D+I L+++ L EI I +G+++L+ +
Sbjct: 90 YGSYF-KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 458 RDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETW 517
RD+ + ILL+ G+ L D G+ W+APE+I + +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVI----QEIGYNC 204
Query: 518 MSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAA----CGLRPEIPKDCPQILKSLMIK 573
+++++S G+ EM G+ YA P++A I +PE+ D + +
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDN---FTDFVKQ 261
Query: 574 CWNNSPSKRPQFSEII 589
C SP +R ++++
Sbjct: 262 CLVKSPEQRATATQLL 277
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 115/271 (42%), Gaps = 28/271 (10%)
Query: 345 IDQIGPNSFKGVYKG-----KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFY 399
+D+IG SF VYKG K V K+ ++ ++++++ L C I +++
Sbjct: 24 LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRD 459
+ ++ L ++ + + GGS DL LK L+ I I ++ +G+ +L+ +RD
Sbjct: 84 GSYL-KSTKLWIIMEYLGGGSALDL-LKPGPLEETYIATILREILKGLDYLHSERKIHRD 141
Query: 460 LNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMS 519
+ + +LL G+V L D G+ W+APE+I + + + +
Sbjct: 142 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI----KQSAYDFKA 197
Query: 520 NVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQIL--------KSLM 571
+++S G+ E+ GE + P++ IPK+ P L K +
Sbjct: 198 DIWSLGITAIELAKGEPPNSDLHPMRVLF---------LIPKNSPPTLEGQHSKPFKEFV 248
Query: 572 IKCWNNSPSKRPQFSEIISLLLRTNNISNSS 602
C N P RP E++ T +S
Sbjct: 249 EACLNKDPRFRPTAKELLKHKFITRYTKKTS 279
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 26/253 (10%)
Query: 359 GKRVGIEKLK-GCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENH-GLCVVTKLM 416
G+ V ++ LK GC G ++++ L T H++I+++ C D+ + +V + +
Sbjct: 38 GEMVAVKALKEGC--GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 95
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
GS+ D L + +++ A + EG+ +L+ +R L ++ +LLD V +G
Sbjct: 96 PLGSLRD-YLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIG 154
Query: 477 DMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ A E DG W APE + + + S+V+SFG+ ++E++T
Sbjct: 155 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL----KECKFYYASDVWSFGVTLYELLT 210
Query: 534 G-EAAYAACSPVQAAVG-------------IAACGLRPEIPKDCPQILKSLMIKCWNNSP 579
++ + + +G + G R P CP + LM CW
Sbjct: 211 YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEA 270
Query: 580 SKRPQFSEIISLL 592
S RP F ++ +L
Sbjct: 271 SFRPTFQNLVPIL 283
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 45/269 (16%)
Query: 353 FKGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHG---L 409
++G ++G+ V ++ D+ + + +L + H+NIL F + H L
Sbjct: 25 WRGSWQGENVAVKIFSSRDEKSWFR---ETELYNTVMLRHENILGFIASDMTSRHSSTQL 81
Query: 410 CVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN--------DHGVAYRDLN 461
++T E GS+ D L+ L T +RI + +A G+ L+ +A+RDL
Sbjct: 82 WLITHYHEMGSLYDY-LQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 462 SQRILLDRHGNVCLGDMGIV------TACKSVGEATEYETDGYRWLAPEII--AGDPESV 513
S+ IL+ ++G C+ D+G+ T VG T R++APE++ +
Sbjct: 141 SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK--RYMAPEVLDETIQVDCF 198
Query: 514 SETWMSNVYSFGMVIWE----MVTGEAAYAACSPVQAAVG-----------IAACGLRPE 558
++++FG+V+WE MV+ P V + RP
Sbjct: 199 DSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPN 258
Query: 559 IPKDC---PQI--LKSLMIKCWNNSPSKR 582
IP P + L LM +CW +PS R
Sbjct: 259 IPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 26/253 (10%)
Query: 359 GKRVGIEKLK-GCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENH-GLCVVTKLM 416
G+ V ++ LK GC G ++++ L T H++I+++ C D+ + +V + +
Sbjct: 37 GEMVAVKALKEGC--GPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 94
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
GS+ D L + +++ A + EG+ +L+ +R L ++ +LLD V +G
Sbjct: 95 PLGSLRD-YLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIG 153
Query: 477 DMGIVTACKSVGEATEYETDG---YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ A E DG W APE + + + S+V+SFG+ ++E++T
Sbjct: 154 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL----KECKFYYASDVWSFGVTLYELLT 209
Query: 534 G-EAAYAACSPVQAAVG-------------IAACGLRPEIPKDCPQILKSLMIKCWNNSP 579
++ + + +G + G R P CP + LM CW
Sbjct: 210 YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEA 269
Query: 580 SKRPQFSEIISLL 592
S RP F ++ +L
Sbjct: 270 SFRPTFQNLVPIL 282
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 45/269 (16%)
Query: 353 FKGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHG---L 409
++G ++G+ V ++ D+ + + +L + H+NIL F + H L
Sbjct: 54 WRGSWQGENVAVKIFSSRDEKSWFR---ETELYNTVMLRHENILGFIASDMTSRHSSTQL 110
Query: 410 CVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN--------DHGVAYRDLN 461
++T E GS+ D L+ L T +RI + +A G+ L+ +A+RDL
Sbjct: 111 WLITHYHEMGSLYDY-LQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 169
Query: 462 SQRILLDRHGNVCLGDMGIV------TACKSVGEATEYETDGYRWLAPEII--AGDPESV 513
S+ IL+ ++G C+ D+G+ T VG T R++APE++ +
Sbjct: 170 SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK--RYMAPEVLDETIQVDCF 227
Query: 514 SETWMSNVYSFGMVIWE----MVTGEAAYAACSPVQAAVG-----------IAACGLRPE 558
++++FG+V+WE MV+ P V + RP
Sbjct: 228 DSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPN 287
Query: 559 IPKDC---PQI--LKSLMIKCWNNSPSKR 582
IP P + L LM +CW +PS R
Sbjct: 288 IPNRWFSDPTLTSLAKLMKECWYQNPSAR 316
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 390 CGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKF 449
H+NI+ V +E+ +V + +EG ++++ I L I + +GIK
Sbjct: 68 LSHQNIVSMIDVD-EEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKH 126
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDGYRWLAPEIIAG 508
+D + +RD+ Q IL+D + + + D GI A T + ++ +PE G
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP-------K 561
E+ E +++YS G+V++EM+ GE + + AV IA ++ +P K
Sbjct: 187 --EATDEC--TDIYSIGIVLYEMLVGEPPFNG----ETAVSIAIKHIQDSVPNVTTDVRK 238
Query: 562 DCPQILKSLMIKCWNNSPSKR 582
D PQ L +++++ + R
Sbjct: 239 DIPQSLSNVILRATEKDKANR 259
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 402 CVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLN 461
C L V + + GG + I + + + + A ++A G+ FL G+ YRDL
Sbjct: 410 CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLK 469
Query: 462 SQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNV 521
++LD G++ + D G+ G T+ ++APEIIA P S W
Sbjct: 470 LDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW---- 525
Query: 522 YSFGMVIWEMVTGEAAY 538
++FG++++EM+ G+A +
Sbjct: 526 WAFGVLLYEMLAGQAPF 542
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 45/269 (16%)
Query: 353 FKGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHG---L 409
++G ++G+ V ++ D+ + + +L + H+NIL F + H L
Sbjct: 25 WRGSWQGENVAVKIFSSRDEKSWFR---ETELYNTVMLRHENILGFIASDMTSRHSSTQL 81
Query: 410 CVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN--------DHGVAYRDLN 461
++T E GS+ D L+ L T +RI + +A G+ L+ +A+RDL
Sbjct: 82 WLITHYHEMGSLYDY-LQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 462 SQRILLDRHGNVCLGDMGIV------TACKSVGEATEYETDGYRWLAPEII--AGDPESV 513
S+ IL+ ++G C+ D+G+ T VG T R++APE++ +
Sbjct: 141 SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK--RYMAPEVLDETIQVDCF 198
Query: 514 SETWMSNVYSFGMVIWE----MVTGEAAYAACSPVQAAVG-----------IAACGLRPE 558
++++FG+V+WE MV+ P V + RP
Sbjct: 199 DSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPN 258
Query: 559 IPKDC---PQI--LKSLMIKCWNNSPSKR 582
IP P + L LM +CW +PS R
Sbjct: 259 IPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 41/285 (14%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVY----------KGKRVGIEKLKGCDKGNAYEFELRKDLL 385
+ +L++I Q+G +F V G V +++L+ +F+ +L
Sbjct: 6 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 65
Query: 386 ELMTCGHKN-ILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSR-KLQTKEIIRIAID 442
+ + H + I+++ V L +V + + G + D + + R +L ++ +
Sbjct: 66 KAL---HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 122
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTAC---KSVGEATEYETDGYR 499
+ +G+++L +RDL ++ IL++ +V + D G+ K E
Sbjct: 123 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 182
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAAC------ 553
W APE ++ + S S+V+SFG+V++E+ T +CSP + +
Sbjct: 183 WYAPESLSDNIFSRQ----SDVWSFGVVLYELFT--YCDKSCSPSAEFLRMMGSERDVPA 236
Query: 554 ----------GLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
G R P CP + LM CW SP RP FS +
Sbjct: 237 LSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 281
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 118/250 (47%), Gaps = 20/250 (8%)
Query: 353 FKGVY---KGKRVGIEKLKGCDKGNAYEFE--LRKDLLELMTCGHKNILQFYCVCVDENH 407
++GVY KG+++ + +K C K + + + + + H +I++ + + E
Sbjct: 41 YEGVYTNHKGEKINV-AVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL--IGIIEEE 97
Query: 408 GLCVVTKLMEGGSVNDLILKSRK-LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRIL 466
++ +L G + + +++ L+ ++ ++ + + + +L +RD+ + IL
Sbjct: 98 PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNIL 157
Query: 467 LDRHGNVCLGDMGIVTACKSVGEATEYETDGYR----WLAPEIIAGDPESVSETWMSNVY 522
+ V LGD G+ + + + Y+ R W++PE I + + S+V+
Sbjct: 158 VASPECVKLGDFGL---SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA----SDVW 210
Query: 523 SFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
F + +WE+++ + +G+ G R P CP +L +LM +CW+ PS R
Sbjct: 211 MFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDR 270
Query: 583 PQFSEIISLL 592
P+F+E++ L
Sbjct: 271 PRFTELVCSL 280
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 118/250 (47%), Gaps = 20/250 (8%)
Query: 353 FKGVY---KGKRVGIEKLKGCDKGNAYEFE--LRKDLLELMTCGHKNILQFYCVCVDENH 407
++GVY KG+++ + +K C K + + + + + H +I++ + + E
Sbjct: 25 YEGVYTNHKGEKINV-AVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL--IGIIEEE 81
Query: 408 GLCVVTKLMEGGSVNDLILKSRK-LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRIL 466
++ +L G + + +++ L+ ++ ++ + + + +L +RD+ + IL
Sbjct: 82 PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNIL 141
Query: 467 LDRHGNVCLGDMGIVTACKSVGEATEYETDGYR----WLAPEIIAGDPESVSETWMSNVY 522
+ V LGD G+ + + + Y+ R W++PE I + + S+V+
Sbjct: 142 VASPECVKLGDFGL---SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA----SDVW 194
Query: 523 SFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
F + +WE+++ + +G+ G R P CP +L +LM +CW+ PS R
Sbjct: 195 MFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDR 254
Query: 583 PQFSEIISLL 592
P+F+E++ L
Sbjct: 255 PRFTELVCSL 264
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 402 CVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLN 461
C L V + + GG + I + + + + A ++A G+ FL G+ YRDL
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLK 148
Query: 462 SQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNV 521
++LD G++ + D G+ G T+ ++APEIIA P S W
Sbjct: 149 LDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW---- 204
Query: 522 YSFGMVIWEMVTGEAAY 538
++FG++++EM+ G+A +
Sbjct: 205 WAFGVLLYEMLAGQAPF 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 118/250 (47%), Gaps = 20/250 (8%)
Query: 353 FKGVY---KGKRVGIEKLKGCDKGNAYEFE--LRKDLLELMTCGHKNILQFYCVCVDENH 407
++GVY KG+++ + +K C K + + + + + H +I++ + + E
Sbjct: 29 YEGVYTNHKGEKINV-AVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL--IGIIEEE 85
Query: 408 GLCVVTKLMEGGSVNDLILKSRK-LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRIL 466
++ +L G + + +++ L+ ++ ++ + + + +L +RD+ + IL
Sbjct: 86 PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNIL 145
Query: 467 LDRHGNVCLGDMGIVTACKSVGEATEYETDGYR----WLAPEIIAGDPESVSETWMSNVY 522
+ V LGD G+ + + + Y+ R W++PE I + + S+V+
Sbjct: 146 VASPECVKLGDFGL---SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA----SDVW 198
Query: 523 SFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
F + +WE+++ + +G+ G R P CP +L +LM +CW+ PS R
Sbjct: 199 MFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDR 258
Query: 583 PQFSEIISLL 592
P+F+E++ L
Sbjct: 259 PRFTELVCSL 268
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 326 QSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGK------RVGI-----EKLKGCDKGN 374
G +IG ++L D +G +F V GK +V + +K++ D
Sbjct: 9 HDGRVKIGHYILG-------DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVG 61
Query: 375 AYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTK 434
++R+++ L H +I++ Y V + + +V + + GG + D I K+ +L K
Sbjct: 62 ----KIRREIQNLKLFRHPHIIKLYQV-ISTPSDIFMVMEYVSGGELFDYICKNGRLDEK 116
Query: 435 EIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE 494
E R+ + G+ + + H V +RDL + +LLD H N + D G+ + S GE
Sbjct: 117 ESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL-SNMMSDGEFLRXS 175
Query: 495 TDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
+ APE+I+G + E +++S G++++ ++ G +
Sbjct: 176 CGSPNYAAPEVISGRLYAGPEV---DIWSSGVILYALLCGTLPF 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 47/297 (15%)
Query: 337 LNSDNLEF--------IDQIGPNSFKGVYK------GKRVGIEKLKGCDKGNAYEFELRK 382
L ++NL F + +G S+ V K G+ V I+K D + +
Sbjct: 14 LGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR 73
Query: 383 DLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAID 442
++ L H+N++ VC + +V + ++ ++DL L L + + +
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWY-LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQ 132
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLA 502
+ GI F + H + +RD+ + IL+ + G V L D G + GE + E + A
Sbjct: 133 IINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRA 192
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAAC--------- 553
PE++ GD V +V++ G ++ EM GE + S + I C
Sbjct: 193 PELLVGD---VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQ 249
Query: 554 ----------GLR-PEIPKDCP---------QILKSLMIKCWNNSPSKRPQFSEIIS 590
G+R PEI + P +++ L KC + P KRP +E++
Sbjct: 250 ELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 51/284 (17%)
Query: 323 QTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFE-LR 381
V++G E+ + + E + +G SF GK + K+ D G+ Y + L+
Sbjct: 16 HHVKAGSEKA-----DPSHFELLKVLGQGSF-----GKVFLVRKVTRPDSGHLYAMKVLK 65
Query: 382 KDLLE-------------LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKS 428
K L+ L H +++ + E L ++ + GG + + K
Sbjct: 66 KATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKE 124
Query: 429 RKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG 488
+++ ++A G+ L+ G+ YRDL + ILLD G++ L D G+
Sbjct: 125 VMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK------ 178
Query: 489 EATEYETDGY------RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
EA ++E Y ++APE++ S S W +S+G++++EM+TG +
Sbjct: 179 EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADW----WSYGVLMFEMLTGSLPFQGKD 234
Query: 543 PVQAAVGIAACGLRPEIPKDCPQIL----KSLMIKCWNNSPSKR 582
+ I L PQ L +SL+ + +P+ R
Sbjct: 235 RKETMTLILKAKL------GMPQFLSTEAQSLLRALFKRNPANR 272
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 131/293 (44%), Gaps = 30/293 (10%)
Query: 330 EEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDK-GNAYEFELRKDLLE-- 386
E + R L ++ E + ++G +F VYK K L E EL ++E
Sbjct: 9 EHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE 68
Query: 387 -LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILK-SRKLQTKEIIRIAIDVA 444
L TC H I++ + L ++ + GG+V+ ++L+ R L +I + +
Sbjct: 69 ILATCDHPYIVKLLGAYYHDG-KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML 127
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-VTACKSVGEATEYETDGYRWLAP 503
E + FL+ + +RDL + +L+ G++ L D G+ K++ + + Y W+AP
Sbjct: 128 EALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY-WMAP 186
Query: 504 EIIAGDPESVSET---WMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP 560
E++ E++ +T + ++++S G+ + EM E + +P++ + IA
Sbjct: 187 EVVMC--ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS------- 237
Query: 561 KDCPQIL---------KSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSNR 604
D P +L + + + +P RP ++++ ++ SN + R
Sbjct: 238 -DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALR 289
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 131/293 (44%), Gaps = 30/293 (10%)
Query: 330 EEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDK-GNAYEFELRKDLLE-- 386
E + R L ++ E + ++G +F VYK K L E EL ++E
Sbjct: 1 EHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE 60
Query: 387 -LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILK-SRKLQTKEIIRIAIDVA 444
L TC H I++ + L ++ + GG+V+ ++L+ R L +I + +
Sbjct: 61 ILATCDHPYIVKLLGAYYHDG-KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML 119
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-VTACKSVGEATEYETDGYRWLAP 503
E + FL+ + +RDL + +L+ G++ L D G+ K++ + + Y W+AP
Sbjct: 120 EALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY-WMAP 178
Query: 504 EIIAGDPESVSET---WMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP 560
E++ E++ +T + ++++S G+ + EM E + +P++ + IA
Sbjct: 179 EVVMC--ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS------- 229
Query: 561 KDCPQIL---------KSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSNR 604
D P +L + + + +P RP ++++ ++ SN + R
Sbjct: 230 -DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALR 281
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 116/263 (44%), Gaps = 12/263 (4%)
Query: 345 IDQIGPNSFKGVYKG-----KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFY 399
+++IG SF V+KG ++V K+ ++ ++++++ L C + ++Y
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRD 459
+ + L ++ + + GGS DL L++ +I + ++ +G+ +L+ +RD
Sbjct: 88 GSYL-KGSKLWIIMEYLGGGSALDL-LRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRD 145
Query: 460 LNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMS 519
+ + +LL G+V L D G+ W+APE+I +S ++ +
Sbjct: 146 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQ---QSAYDS-KA 201
Query: 520 NVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSP 579
+++S G+ E+ GE + P++ I P + D + K + C N P
Sbjct: 202 DIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN-PPTLVGDFTKSFKEFIDACLNKDP 260
Query: 580 SKRPQFSEIISLLLRTNNISNSS 602
S RP E++ N +S
Sbjct: 261 SFRPTAKELLKHKFIVKNSKKTS 283
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 339 SDNLEFIDQIGPNSFKGVYKGKR-----VGIEKLKGCDKGNAYEFELRKDLLELMTCGHK 393
SDN + +G F VYKG+ V +++LK ++ E + + ++ + H+
Sbjct: 37 SDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKE-ERXQGGELQFQTEVEMISMAVHR 95
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK-----LQTKEIIRIAIDVAEGIK 448
N+L+ C+ L +V M GSV L+ R L + RIA+ A G+
Sbjct: 96 NLLRLRGFCMTPTERL-LVYPYMANGSVAS-CLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 449 FLNDH---GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG-YRWLAPE 504
+L+DH + +RD+ + ILLD +GD G+ G +APE
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPE 213
Query: 505 IIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAAC--------------------SPV 544
++ S ++V+ +G+++ E++TG+ A+ +
Sbjct: 214 YLSTGKSSEK----TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 269
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+A V + G + ++ Q+++ ++ C +SP +RP+ SE++ +L
Sbjct: 270 EALVDVDLQGNYKD--EEVEQLIQVALL-CTQSSPMERPKMSEVVRML 314
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 402 CVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLN 461
C L V + + GG + I + K + + + A +++ G+ FL+ G+ YRDL
Sbjct: 88 CFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLK 147
Query: 462 SQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNV 521
++LD G++ + D G+ G T ++APEIIA P S W
Sbjct: 148 LDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDW---- 203
Query: 522 YSFGMVIWEMVTGEAAY 538
+++G++++EM+ G+ +
Sbjct: 204 WAYGVLLYEMLAGQPPF 220
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 339 SDNLEFIDQIGPNSFKGVYKGKR-----VGIEKLKGCDKGNAYEFELRKDLLELMTCGHK 393
SDN + +G F VYKG+ V +++LK ++ E + + ++ + H+
Sbjct: 29 SDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKE-ERTQGGELQFQTEVEMISMAVHR 87
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK-----LQTKEIIRIAIDVAEGIK 448
N+L+ C+ L +V M GSV L+ R L + RIA+ A G+
Sbjct: 88 NLLRLRGFCMTPTERL-LVYPYMANGSVAS-CLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 449 FLNDH---GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG-YRWLAPE 504
+L+DH + +RD+ + ILLD +GD G+ G +APE
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPE 205
Query: 505 IIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAAC--------------------SPV 544
++ S ++V+ +G+++ E++TG+ A+ +
Sbjct: 206 YLSTGKSSEK----TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLL 592
+A V + G + ++ Q+++ ++ C +SP +RP+ SE++ +L
Sbjct: 262 EALVDVDLQGNYKD--EEVEQLIQVALL-CTQSSPMERPKMSEVVRML 306
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 120/275 (43%), Gaps = 39/275 (14%)
Query: 346 DQIGPNSFKGVYKGKRVGIE-KLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVD 404
+ IG F V++GK G E +K + ++ + + H+NIL F
Sbjct: 48 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 107
Query: 405 EN---HGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN--------DH 453
+N L +V+ E GS+ D L + + +I++A+ A G+ L+
Sbjct: 108 DNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIV----TACKSVGEATEYETDGYRWLAPEII--A 507
+A+RDL S+ IL+ ++G C+ D+G+ +A ++ A + R++APE++ +
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVTG----------EAAYAACSPVQAAVG-----IAA 552
+ + +++Y+ G+V WE+ + Y P +V +
Sbjct: 227 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 286
Query: 553 CGLRPEIPK-----DCPQILKSLMIKCWNNSPSKR 582
LRP IP + +++ +M +CW + + R
Sbjct: 287 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 321
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 120/275 (43%), Gaps = 39/275 (14%)
Query: 346 DQIGPNSFKGVYKGKRVGIE-KLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVD 404
+ IG F V++GK G E +K + ++ + + H+NIL F
Sbjct: 10 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 69
Query: 405 EN---HGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN--------DH 453
+N L +V+ E GS+ D L + + +I++A+ A G+ L+
Sbjct: 70 DNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 128
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIV----TACKSVGEATEYETDGYRWLAPEII--A 507
+A+RDL S+ IL+ ++G C+ D+G+ +A ++ A + R++APE++ +
Sbjct: 129 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 188
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVTG----------EAAYAACSPVQAAVG-----IAA 552
+ + +++Y+ G+V WE+ + Y P +V +
Sbjct: 189 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 248
Query: 553 CGLRPEIPK-----DCPQILKSLMIKCWNNSPSKR 582
LRP IP + +++ +M +CW + + R
Sbjct: 249 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 283
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 120/275 (43%), Gaps = 39/275 (14%)
Query: 346 DQIGPNSFKGVYKGKRVGIE-KLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVD 404
+ IG F V++GK G E +K + ++ + + H+NIL F
Sbjct: 35 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 94
Query: 405 EN---HGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN--------DH 453
+N L +V+ E GS+ D L + + +I++A+ A G+ L+
Sbjct: 95 DNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 153
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIV----TACKSVGEATEYETDGYRWLAPEII--A 507
+A+RDL S+ IL+ ++G C+ D+G+ +A ++ A + R++APE++ +
Sbjct: 154 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 213
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVTG----------EAAYAACSPVQAAVG-----IAA 552
+ + +++Y+ G+V WE+ + Y P +V +
Sbjct: 214 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 273
Query: 553 CGLRPEIPK-----DCPQILKSLMIKCWNNSPSKR 582
LRP IP + +++ +M +CW + + R
Sbjct: 274 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 308
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 120/275 (43%), Gaps = 39/275 (14%)
Query: 346 DQIGPNSFKGVYKGKRVGIE-KLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVD 404
+ IG F V++GK G E +K + ++ + + H+NIL F
Sbjct: 9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 68
Query: 405 EN---HGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN--------DH 453
+N L +V+ E GS+ D L + + +I++A+ A G+ L+
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 127
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIV----TACKSVGEATEYETDGYRWLAPEII--A 507
+A+RDL S+ IL+ ++G C+ D+G+ +A ++ A + R++APE++ +
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVTG----------EAAYAACSPVQAAVG-----IAA 552
+ + +++Y+ G+V WE+ + Y P +V +
Sbjct: 188 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 247
Query: 553 CGLRPEIPK-----DCPQILKSLMIKCWNNSPSKR 582
LRP IP + +++ +M +CW + + R
Sbjct: 248 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 282
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 120/275 (43%), Gaps = 39/275 (14%)
Query: 346 DQIGPNSFKGVYKGKRVGIE-KLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVD 404
+ IG F V++GK G E +K + ++ + + H+NIL F
Sbjct: 15 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 74
Query: 405 EN---HGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN--------DH 453
+N L +V+ E GS+ D L + + +I++A+ A G+ L+
Sbjct: 75 DNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 133
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIV----TACKSVGEATEYETDGYRWLAPEII--A 507
+A+RDL S+ IL+ ++G C+ D+G+ +A ++ A + R++APE++ +
Sbjct: 134 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 193
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVTG----------EAAYAACSPVQAAVG-----IAA 552
+ + +++Y+ G+V WE+ + Y P +V +
Sbjct: 194 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 253
Query: 553 CGLRPEIPK-----DCPQILKSLMIKCWNNSPSKR 582
LRP IP + +++ +M +CW + + R
Sbjct: 254 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 288
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 111/269 (41%), Gaps = 46/269 (17%)
Query: 338 NSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFE-LRKDLLE---------- 386
+ E + +G SF GK ++K+ G D Y + L+K L+
Sbjct: 22 DPSQFELLKVLGQGSF-----GKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 387 ---LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDV 443
L+ H I++ + E L ++ + GG + + K +++ ++
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY----- 498
A + L+ G+ YRDL + ILLD G++ L D G+ E+ ++E Y
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK------ESIDHEKKAYSFCGT 189
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRP 557
++APE++ + S W +SFG++++EM+TG + + I L
Sbjct: 190 VEYMAPEVVNRRGHTQSADW----WSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL-- 243
Query: 558 EIPKDCPQIL----KSLMIKCWNNSPSKR 582
PQ L +SL+ + +P+ R
Sbjct: 244 ----GMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 14/186 (7%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
L VV + + GGS+ D++ ++ + +I + + + ++FL+ + V +RD+ S ILL
Sbjct: 93 LWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 151
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII---AGDPESVSETWMSNVYSFG 525
G+V L D G W+APE++ A P+ +++S G
Sbjct: 152 MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK-------VDIWSLG 204
Query: 526 MVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEI--PKDCPQILKSLMIKCWNNSPSKRP 583
++ EM+ GE Y +P++A IA G PE+ P+ I + + +C KR
Sbjct: 205 IMAIEMIEGEPPYLNENPLRALYLIATNG-TPELQNPEKLSAIFRDFLNRCLEMDVEKRG 263
Query: 584 QFSEII 589
E+I
Sbjct: 264 SAKELI 269
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 120/275 (43%), Gaps = 39/275 (14%)
Query: 346 DQIGPNSFKGVYKGKRVGIE-KLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVD 404
+ IG F V++GK G E +K + ++ + + H+NIL F
Sbjct: 12 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 71
Query: 405 EN---HGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN--------DH 453
+N L +V+ E GS+ D L + + +I++A+ A G+ L+
Sbjct: 72 DNGTWTQLWLVSDYHEHGSLFDY-LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 130
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIV----TACKSVGEATEYETDGYRWLAPEII--A 507
+A+RDL S+ IL+ ++G C+ D+G+ +A ++ A + R++APE++ +
Sbjct: 131 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 190
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVTG----------EAAYAACSPVQAAVG-----IAA 552
+ + +++Y+ G+V WE+ + Y P +V +
Sbjct: 191 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 250
Query: 553 CGLRPEIPK-----DCPQILKSLMIKCWNNSPSKR 582
LRP IP + +++ +M +CW + + R
Sbjct: 251 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR 285
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 111/269 (41%), Gaps = 46/269 (17%)
Query: 338 NSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFE-LRKDLLE---------- 386
+ E + +G SF GK ++K+ G D Y + L+K L+
Sbjct: 22 DPSQFELLKVLGQGSF-----GKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 387 ---LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDV 443
L+ H I++ + E L ++ + GG + + K +++ ++
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY----- 498
A + L+ G+ YRDL + ILLD G++ L D G+ E+ ++E Y
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK------ESIDHEKKAYSFCGT 189
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRP 557
++APE++ + S W +SFG++++EM+TG + + I L
Sbjct: 190 VEYMAPEVVNRRGHTQSADW----WSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL-- 243
Query: 558 EIPKDCPQIL----KSLMIKCWNNSPSKR 582
PQ L +SL+ + +P+ R
Sbjct: 244 ----GMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDH 453
N L Y V DE L VV + + GGS+ D++ ++ + +I + + + ++FL+ +
Sbjct: 81 NYLDSYLVG-DE---LWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 135
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII---AGDP 510
V +RD+ S ILL G+V L D G W+APE++ A P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 511 ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEI--PKDCPQILK 568
+ +++S G++ EM+ GE Y +P++A IA G PE+ P+ I +
Sbjct: 196 K-------VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-TPELQNPEKLSAIFR 247
Query: 569 SLMIKCWNNSPSKRPQFSEII 589
+ +C + KR E++
Sbjct: 248 DFLNRCLDMDVEKRGSAKELL 268
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 111/269 (41%), Gaps = 46/269 (17%)
Query: 338 NSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFE-LRKDLLE---------- 386
+ E + +G SF GK ++K+ G D Y + L+K L+
Sbjct: 23 DPSQFELLKVLGQGSF-----GKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 77
Query: 387 ---LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDV 443
L+ H I++ + E L ++ + GG + + K +++ ++
Sbjct: 78 RDILVEVNHPFIVKLHYAFQTEG-KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 136
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY----- 498
A + L+ G+ YRDL + ILLD G++ L D G+ E+ ++E Y
Sbjct: 137 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK------ESIDHEKKAYSFCGT 190
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRP 557
++APE++ + S W +SFG++++EM+TG + + I L
Sbjct: 191 VEYMAPEVVNRRGHTQSADW----WSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL-- 244
Query: 558 EIPKDCPQIL----KSLMIKCWNNSPSKR 582
PQ L +SL+ + +P+ R
Sbjct: 245 ----GMPQFLSPEAQSLLRMLFKRNPANR 269
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDH 453
N L Y V DE L VV + + GGS+ D++ ++ + +I + + + ++FL+ +
Sbjct: 81 NYLDSYLVG-DE---LWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 135
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII---AGDP 510
V +RD+ S ILL G+V L D G W+APE++ A P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 511 ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEI--PKDCPQILK 568
+ +++S G++ EM+ GE Y +P++A IA G PE+ P+ I +
Sbjct: 196 K-------VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-TPELQNPEKLSAIFR 247
Query: 569 SLMIKCWNNSPSKRPQFSEII 589
+ +C + KR E++
Sbjct: 248 DFLNRCLDMDVEKRGSAKELL 268
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 106/229 (46%), Gaps = 10/229 (4%)
Query: 330 EEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAY-EFELRKDLLE-- 386
E + R L D E I ++G F VYK + L + E EL ++E
Sbjct: 2 EHVTRDLNPEDFWEIIGELG--DFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID 59
Query: 387 -LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILK-SRKLQTKEIIRIAIDVA 444
L +C H NI++ EN L ++ + GG+V+ ++L+ R L +I +
Sbjct: 60 ILASCDHPNIVKLLDAFYYEN-NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 118
Query: 445 EGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI-VTACKSVGEATEYETDGYRWLAP 503
+ + +L+D+ + +RDL + IL G++ L D G+ ++ + + W+AP
Sbjct: 119 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
Query: 504 EIIAGDP-ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIA 551
E++ + + + ++V+S G+ + EM E + +P++ + IA
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA 227
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDH 453
N L Y V DE L VV + + GGS+ D++ ++ + +I + + + ++FL+ +
Sbjct: 81 NYLDSYLVG-DE---LWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 135
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII---AGDP 510
V +RD+ S ILL G+V L D G W+APE++ A P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 511 ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEI--PKDCPQILK 568
+ +++S G++ EM+ GE Y +P++A IA G PE+ P+ I +
Sbjct: 196 K-------VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-TPELQNPEKLSAIFR 247
Query: 569 SLMIKCWNNSPSKRPQFSEII 589
+ +C KR E++
Sbjct: 248 DFLNRCLEMDVEKRGSAKELL 268
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 27/163 (16%)
Query: 392 HKNILQFY-------CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVA 444
H+NILQF V VD L ++T E GS++D LK+ + E+ IA +A
Sbjct: 77 HENILQFIGAEKRGTSVDVD----LWLITAFHEKGSLSDF-LKANVVSWNELCHIAETMA 131
Query: 445 EGIKFLNDH----------GVAYRDLNSQRILLDRHGNVCLGDMGIVT---ACKSVGEAT 491
G+ +L++ +++RD+ S+ +LL + C+ D G+ A KS G+ T
Sbjct: 132 RGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGD-T 190
Query: 492 EYETDGYRWLAPEIIAGDPESVSETWMS-NVYSFGMVIWEMVT 533
+ R++APE++ G + ++ ++Y+ G+V+WE+ +
Sbjct: 191 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 21/236 (8%)
Query: 375 AYEFELRKDLLELMTCGHKNILQFYCVCVDENHG---LCVVTKLMEGGSVNDLILKSRKL 431
++ R++ H I+ Y E +V + ++G ++ D++ +
Sbjct: 54 SFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM 113
Query: 432 QTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA- 490
K I + D + + F + +G+ +RD+ I++ V + D GI A G +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 491 --TEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAV 548
T ++L+PE GD S S+VYS G V++E++TGE + SPV
Sbjct: 174 TQTAAVIGTAQYLSPEQARGD----SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS--- 226
Query: 549 GIAACGLRPE-IPKDCPQ-----ILKSLMIKCWNNSPSKRPQF-SEIISLLLRTNN 597
+A +R + IP L ++++K +P R Q +E+ + L+R +N
Sbjct: 227 -VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 21/236 (8%)
Query: 375 AYEFELRKDLLELMTCGHKNILQFYCVCVDENHG---LCVVTKLMEGGSVNDLILKSRKL 431
++ R++ H I+ Y E +V + ++G ++ D++ +
Sbjct: 54 SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM 113
Query: 432 QTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA- 490
K I + D + + F + +G+ +RD+ IL+ V + D GI A G +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSV 173
Query: 491 --TEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAV 548
T ++L+PE GD S S+VYS G V++E++TGE + SPV
Sbjct: 174 XQTAAVIGTAQYLSPEQARGD----SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS--- 226
Query: 549 GIAACGLRPE-IPKDCPQ-----ILKSLMIKCWNNSPSKRPQF-SEIISLLLRTNN 597
+A +R + IP L ++++K +P R Q +E+ + L+R +N
Sbjct: 227 -VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 402 CVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLN 461
C L V + + GG + + + RKL + + +++ + +L++ G+ YRDL
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 148
Query: 462 SQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNV 521
+LLD G++ L D G+ G+ T ++APEI+ G+ S W
Sbjct: 149 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW---- 204
Query: 522 YSFGMVIWEMVTGEAAY 538
++ G++++EM+ G + +
Sbjct: 205 WALGVLMFEMMAGRSPF 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 402 CVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLN 461
C L V + + GG + + + RKL + + +++ + +L++ G+ YRDL
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 137
Query: 462 SQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNV 521
+LLD G++ L D G+ G+ T ++APEI+ G+ S W
Sbjct: 138 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW---- 193
Query: 522 YSFGMVIWEMVTGEAAY 538
++ G++++EM+ G + +
Sbjct: 194 WALGVLMFEMMAGRSPF 210
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 402 CVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLN 461
C L V + + GG + + + RKL + + +++ + +L++ G+ YRDL
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 180
Query: 462 SQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNV 521
+LLD G++ L D G+ G+ T ++APEI+ G+ S W
Sbjct: 181 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDW---- 236
Query: 522 YSFGMVIWEMVTGEAAY 538
++ G++++EM+ G + +
Sbjct: 237 WALGVLMFEMMAGRSPF 253
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 402 CVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLN 461
C L V + + GG + + + RKL + + +++ + +L++ G+ YRDL
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLK 133
Query: 462 SQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNV 521
+LLD G++ L D G+ G+ T ++APEI+ G+ S W
Sbjct: 134 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDW---- 189
Query: 522 YSFGMVIWEMVTGEAAY 538
++ G++++EM+ G + +
Sbjct: 190 WALGVLMFEMMAGRSPF 206
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 346 DQIGPNSFKGVYKG----KRVGIEKLKGCDKGNAYEF--ELRKDLLELMTCGHKNILQFY 399
+++G F VYKG V ++KL E + +++ + C H+N+++
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLIL---KSRKLQTKEIIRIAIDVAEGIKFLNDHGVA 456
D + LC+V M GS+ D + + L +IA A GI FL+++
Sbjct: 97 GFSSDGD-DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 457 YRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAGDPESVS 514
+RD+ S ILLD + D G+ A + + ++APE + G+
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEI---- 211
Query: 515 ETWMSNVYSFGMVIWEMVTGEAA 537
T S++YSFG+V+ E++TG A
Sbjct: 212 -TPKSDIYSFGVVLLEIITGLPA 233
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 118/301 (39%), Gaps = 52/301 (17%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEK-----------LKGCDKGNAYEFELRK 382
+W +NLEF +G +F V GI K LK +K ++ E E
Sbjct: 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK--EKADSSEREALM 96
Query: 383 DLLELMT--CGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI---- 436
L++MT H+NI+ C + G +N L K K EI
Sbjct: 97 SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 156
Query: 437 ------------------IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDM 478
+ A VA+G++FL +RDL ++ +L+ V + D
Sbjct: 157 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDF 216
Query: 479 GIVTACKSVGEATEYETDG-----YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
G+ + + + Y G +W+APE + ++ S+V+S+G+++WE+ +
Sbjct: 217 GL---ARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK----SDVWSYGILLWEIFS 269
Query: 534 -GEAAYAACSPVQAAV-GIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISL 591
G Y PV A + G + + P + + +M CW KRP F + S
Sbjct: 270 LGVNPYPGI-PVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 328
Query: 592 L 592
L
Sbjct: 329 L 329
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 14/186 (7%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
L VV + + GGS+ D++ ++ + +I + + + ++FL+ + V +R++ S ILL
Sbjct: 93 LWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLG 151
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII---AGDPESVSETWMSNVYSFG 525
G+V L D G W+APE++ A P+ +++S G
Sbjct: 152 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK-------VDIWSLG 204
Query: 526 MVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEI--PKDCPQILKSLMIKCWNNSPSKRP 583
++ EM+ GE Y +P++A IA G PE+ P+ I + + +C KR
Sbjct: 205 IMAIEMIEGEPPYLNENPLRALYLIATNG-TPELQNPEKLSAIFRDFLNRCLEMDVEKRG 263
Query: 584 QFSEII 589
E+I
Sbjct: 264 SAKELI 269
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 408 GLCVVTKLMEGGSVNDLILKSRKLQTKEI--IRIAIDVAEGIKFLNDHGVAYRDLNSQRI 465
LC+V LM GG + I + E + A ++ G++ L+ + YRDL + I
Sbjct: 258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENI 317
Query: 466 LLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFG 525
LLD HG++ + D+G+ G+ + ++APE++ + + S W ++ G
Sbjct: 318 LLDDHGHIRISDLGLAVHVPE-GQTIKGRVGTVGYMAPEVVKNERYTFSPDW----WALG 372
Query: 526 MVIWEMVTGEAAY 538
+++EM+ G++ +
Sbjct: 373 CLLYEMIAGQSPF 385
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 21/236 (8%)
Query: 375 AYEFELRKDLLELMTCGHKNILQFYCVCVDENHG---LCVVTKLMEGGSVNDLILKSRKL 431
++ R++ H I+ Y E +V + ++G ++ D++ +
Sbjct: 54 SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM 113
Query: 432 QTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA- 490
K I + D + + F + +G+ +RD+ I++ V + D GI A G +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 491 --TEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAV 548
T ++L+PE GD S S+VYS G V++E++TGE + SPV
Sbjct: 174 TQTAAVIGTAQYLSPEQARGD----SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS--- 226
Query: 549 GIAACGLRPE-IPKDCPQ-----ILKSLMIKCWNNSPSKRPQF-SEIISLLLRTNN 597
+A +R + IP L ++++K +P R Q +E+ + L+R +N
Sbjct: 227 -VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 346 DQIGPNSFKGVYKG----KRVGIEKLKGCDKGNAYEF--ELRKDLLELMTCGHKNILQFY 399
+++G F VYKG V ++KL E + +++ + C H+N+++
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLIL---KSRKLQTKEIIRIAIDVAEGIKFLNDHGVA 456
D + LC+V M GS+ D + + L +IA A GI FL+++
Sbjct: 97 GFSSDGD-DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 457 YRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAGDPESVS 514
+RD+ S ILLD + D G+ A + + ++APE + G+
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEI---- 211
Query: 515 ETWMSNVYSFGMVIWEMVTGEAA 537
T S++YSFG+V+ E++TG A
Sbjct: 212 -TPKSDIYSFGVVLLEIITGLPA 233
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 125/285 (43%), Gaps = 38/285 (13%)
Query: 341 NLEFIDQIGPNSFKGVYK------GKRVGIEKLKGCDKGNAYEFELRKDLLE----LMTC 390
N +IG F VY+ G V ++K++ D +A + R D ++ L
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA---KARADCIKEIDLLKQL 89
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK----LQTKEIIRIAIDVAEG 446
H N++++Y +++N L +V +L + G ++ +I +K + + + + + +
Sbjct: 90 NHPNVIKYYASFIEDNE-LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII 506
++ ++ V +RD+ + + G V LGD+G+ S A +++PE I
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVTGEAA--------YAACSPVQAAVGIAACGLRPE 558
+ + S+++S G +++EM ++ Y+ C ++ C P
Sbjct: 209 HEN----GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE------QCDY-PP 257
Query: 559 IPKD-CPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSS 602
+P D + L+ L+ C N P KRP + + + R + + SS
Sbjct: 258 LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 408 GLCVVTKLMEGGSVNDLILKSRKLQTKEI--IRIAIDVAEGIKFLNDHGVAYRDLNSQRI 465
LC+V LM GG + I + E + A ++ G++ L+ + YRDL + I
Sbjct: 258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENI 317
Query: 466 LLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFG 525
LLD HG++ + D+G+ G+ + ++APE++ + + S W ++ G
Sbjct: 318 LLDDHGHIRISDLGLAVHVPE-GQTIKGRVGTVGYMAPEVVKNERYTFSPDW----WALG 372
Query: 526 MVIWEMVTGEAAY 538
+++EM+ G++ +
Sbjct: 373 CLLYEMIAGQSPF 385
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 21/236 (8%)
Query: 375 AYEFELRKDLLELMTCGHKNILQFYCVCVDENHG---LCVVTKLMEGGSVNDLILKSRKL 431
++ R++ H I+ Y E +V + ++G ++ D++ +
Sbjct: 54 SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM 113
Query: 432 QTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA- 490
K I + D + + F + +G+ +RD+ I++ V + D GI A G +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 491 --TEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAV 548
T ++L+PE GD S S+VYS G V++E++TGE + SPV
Sbjct: 174 TQTAAVIGTAQYLSPEQARGD----SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS--- 226
Query: 549 GIAACGLRPE-IPKDCPQ-----ILKSLMIKCWNNSPSKRPQF-SEIISLLLRTNN 597
+A +R + IP L ++++K +P R Q +E+ + L+R +N
Sbjct: 227 -VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 346 DQIGPNSFKGVYKG----KRVGIEKLKGCDKGNAYEF--ELRKDLLELMTCGHKNILQFY 399
+++G F VYKG V ++KL E + +++ + C H+N+++
Sbjct: 31 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLIL---KSRKLQTKEIIRIAIDVAEGIKFLNDHGVA 456
D + LC+V M GS+ D + + L +IA A GI FL+++
Sbjct: 91 GFSSDGD-DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 149
Query: 457 YRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAGDPESVS 514
+RD+ S ILLD + D G+ A + + ++APE + G+
Sbjct: 150 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEI---- 205
Query: 515 ETWMSNVYSFGMVIWEMVTGEAA 537
T S++YSFG+V+ E++TG A
Sbjct: 206 -TPKSDIYSFGVVLLEIITGLPA 227
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK----LQTKEIIRIAIDVAEGI 447
H + + LC+V +M GG + I + Q I + G+
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 448 KFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR----WLAP 503
+ L+ + YRDL + +LLD GNV + D+G+ K A + +T GY ++AP
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK----AGQTKTKGYAGTPGFMAP 358
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
E++ G+ S + ++ G+ ++EM+ + A
Sbjct: 359 ELLLGEEYDFS----VDYFALGVTLYEMIAARGPFRA 391
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK----LQTKEIIRIAIDVAEGI 447
H + + LC+V +M GG + I + Q I + G+
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 448 KFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR----WLAP 503
+ L+ + YRDL + +LLD GNV + D+G+ K A + +T GY ++AP
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK----AGQTKTKGYAGTPGFMAP 358
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
E++ G+ S + ++ G+ ++EM+ + A
Sbjct: 359 ELLLGEEYDFS----VDYFALGVTLYEMIAARGPFRA 391
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK----LQTKEIIRIAIDVAEGI 447
H + + LC+V +M GG + I + Q I + G+
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 448 KFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR----WLAP 503
+ L+ + YRDL + +LLD GNV + D+G+ K A + +T GY ++AP
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK----AGQTKTKGYAGTPGFMAP 358
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
E++ G+ S + ++ G+ ++EM+ + A
Sbjct: 359 ELLLGEEYDFS----VDYFALGVTLYEMIAARGPFRA 391
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK----LQTKEIIRIAIDVAEGI 447
H + + LC+V +M GG + I + Q I + G+
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 448 KFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR----WLAP 503
+ L+ + YRDL + +LLD GNV + D+G+ K A + +T GY ++AP
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK----AGQTKTKGYAGTPGFMAP 358
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
E++ G+ S + ++ G+ ++EM+ + A
Sbjct: 359 ELLLGEEYDFS----VDYFALGVTLYEMIAARGPFRA 391
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 18/197 (9%)
Query: 411 VVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+V + ++G ++ D++ + K I + D + + F + +G+ +RD+ I++
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 169
Query: 471 GNVCLGDMGIVTACKSVGEA---TEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMV 527
V + D GI A G + T ++L+PE GD S S+VYS G V
Sbjct: 170 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD----SVDARSDVYSLGCV 225
Query: 528 IWEMVTGEAAYAACSPVQAAVGIAACGLRPE-IPKDCPQ-----ILKSLMIKCWNNSPSK 581
++E++TGE + SPV +A +R + IP L ++++K +P
Sbjct: 226 LYEVLTGEPPFTGDSPVS----VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPEN 281
Query: 582 RPQF-SEIISLLLRTNN 597
R Q +E+ + L+R +N
Sbjct: 282 RYQTAAEMRADLVRVHN 298
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 125/303 (41%), Gaps = 66/303 (21%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKG----KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGH 392
L+ DNL+ ++ IG + VYKG + V ++ ++ N F K++ + H
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQN---FINEKNIYRVPLMEH 66
Query: 393 KNILQFYC----VCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII---RIAIDVAE 445
NI +F V D +V + GS + K L T + + R+A V
Sbjct: 67 DNIARFIVGDERVTADGRMEYLLVMEYYPNGS----LXKYLSLHTSDWVSSCRLAHSVTR 122
Query: 446 GIKFLN------DH---GVAYRDLNSQRILLDRHGNVCLGDMGI---VTACKSV--GE-- 489
G+ +L+ DH +++RDLNS+ +L+ G + D G+ +T + V GE
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 490 -ATEYETDGYRWLAPEIIAG-----DPESVSETWMSNVYSFGMVIWE-------MVTGEA 536
A E R++APE++ G D ES + ++Y+ G++ WE + GE+
Sbjct: 183 NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQ--VDMYALGLIYWEIFMRCTDLFPGES 240
Query: 537 AYAACSPVQAAVG-----------IAACGLRPEIPKD------CPQILKSLMIKCWNNSP 579
Q VG ++ RP+ P+ + LK + CW+
Sbjct: 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDA 300
Query: 580 SKR 582
R
Sbjct: 301 EAR 303
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
L H NI++ + + ++++ +V +L GG + D I+K ++ + RI V G
Sbjct: 75 LKKLDHPNIMKLFEI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG 133
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVC---LGDMGIVTACKSVGEATEYETDGYRWLAP 503
I +++ H + +RDL + ILL+ C + D G+ T + + + Y ++AP
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY-YIAP 192
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E++ G + + W S G++++ +++G +
Sbjct: 193 EVLRGTYDEKCDVW-----SAGVILYILLSGTPPF 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
L H NI++ + + ++++ +V +L GG + D I+K ++ + RI V G
Sbjct: 75 LKKLDHPNIMKLFEI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG 133
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVC---LGDMGIVTACKSVGEATEYETDGYRWLAP 503
I +++ H + +RDL + ILL+ C + D G+ T + + + Y ++AP
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY-YIAP 192
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E++ G + + W S G++++ +++G +
Sbjct: 193 EVLRGTYDEKCDVW-----SAGVILYILLSGTPPF 222
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
L H NI++ + + ++++ +V +L GG + D I+K ++ + RI V G
Sbjct: 75 LKKLDHPNIMKLFEI-LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG 133
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVC---LGDMGIVTACKSVGEATEYETDGYRWLAP 503
I +++ H + +RDL + ILL+ C + D G+ T + + + Y ++AP
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY-YIAP 192
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E++ G + + W S G++++ +++G +
Sbjct: 193 EVLRGTYDEKCDVW-----SAGVILYILLSGTPPF 222
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I IG SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTIGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + M GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 17/264 (6%)
Query: 348 IGPNSFKGVYKGKRV--GIE-KLKGCDKGNAYEF----ELRKDLLELMTCGHKNILQFYC 400
+G SF GVY+ + + G+E +K DK Y+ ++ ++ H +IL+ Y
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 401 VCVDENHGLCVVTKLMEGGSVNDLILKSR--KLQTKEIIRIAIDVAEGIKFLNDHGVAYR 458
D N+ + +V ++ G +N LK+R E + G+ +L+ HG+ +R
Sbjct: 79 YFEDSNY-VYLVLEMCHNGEMNR-YLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHR 136
Query: 459 DLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWM 518
DL +LL R+ N+ + D G+ T K E +++PEI +
Sbjct: 137 DLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLE---- 192
Query: 519 SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNS 578
S+V+S G + + ++ G + + + E+P K L+ + +
Sbjct: 193 SDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY--EMPSFLSIEAKDLIHQLLRRN 250
Query: 579 PSKRPQFSEIISLLLRTNNISNSS 602
P+ R S ++ + N S S
Sbjct: 251 PADRLSLSSVLDHPFMSRNSSTKS 274
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 34/225 (15%)
Query: 338 NSDNLEFIDQIGPNSFKGVYKG-----------KRVGIEKLKGCDKGNAYEFELRKDLLE 386
+S + ++++G ++ VYKG K V ++ +G E L K+L
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-- 60
Query: 387 LMTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRI 439
H+NI++ Y V EN V + K M+ +V + R L+ +
Sbjct: 61 ----KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGN---TPRGLELNLVKYF 113
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR 499
+ +G+ F +++ + +RDL Q +L+++ G + LGD G+ A E
Sbjct: 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLW 173
Query: 500 WLAPEIIAGDPESVSETWMS--NVYSFGMVIWEMVTGEAAYAACS 542
+ AP+++ G S T+ + +++S G ++ EM+TG+ + +
Sbjct: 174 YRAPDVLMG-----SRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 21/236 (8%)
Query: 375 AYEFELRKDLLELMTCGHKNILQFYCVCVDENHG---LCVVTKLMEGGSVNDLILKSRKL 431
++ R++ H I+ Y E +V + ++G ++ D++ +
Sbjct: 54 SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM 113
Query: 432 QTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA- 490
K I + D + + F + +G+ +RD+ I++ V + D GI A G +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 491 --TEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAV 548
T ++L+PE GD S S+VYS G V++E++TGE + SP
Sbjct: 174 TQTAAVIGTAQYLSPEQARGD----SVDARSDVYSLGCVLYEVLTGEPPFTGDSPDS--- 226
Query: 549 GIAACGLRPE-IPKDCPQ-----ILKSLMIKCWNNSPSKRPQF-SEIISLLLRTNN 597
+A +R + IP L ++++K +P R Q +E+ + L+R +N
Sbjct: 227 -VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I IG SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTIGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + M GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 123/286 (43%), Gaps = 38/286 (13%)
Query: 336 LLNSDNLEFIDQIGPNSF------KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMT 389
++++ + FI ++G F +G++ G ++++ ++ + E + D+ L
Sbjct: 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN 84
Query: 390 CGHKNILQFYCVCVDEN---HGLCVVTKLMEGGS----VNDLILKSRKLQTKEIIRIAID 442
H NIL+ C+ E H ++ + G+ + L K L +I+ + +
Sbjct: 85 --HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVT-ACKSV----------GEAT 491
+ G++ ++ G A+RDL ILL G L D+G + AC V A
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 492 EYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIA 551
+ T YR APE+ + V + ++V+S G V++ M+ GE Y +V +A
Sbjct: 203 QRCTISYR--APELFSVQSHCVIDE-RTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259
Query: 552 ACGLR--PEIPKDCP---QILKSLMIKCWNNSPSKRPQFSEIISLL 592
P+ P+ Q+L S+M P +RP ++S L
Sbjct: 260 VQNQLSIPQSPRHSSALWQLLNSMM----TVDPHQRPHIPLLLSQL 301
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 341 NLEFIDQIGPNSF------KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKN 394
N + IG +F + + GK V ++ + ++ +L +++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ + V ++ L +V + GG V D ++ +++ KE + +++ +
Sbjct: 75 IVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVS 514
+ +RDL ++ +LLD N+ + D G + G + + APE+ G
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 515 ETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP----KDCPQILKSL 570
E +V+S G++++ +V+G + + + + R IP DC +LK
Sbjct: 193 EV---DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLLKKF 247
Query: 571 MIKCWNNSPSKRPQFSEII 589
+I +PSKR +I+
Sbjct: 248 LIL----NPSKRGTLEQIM 262
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 341 NLEFIDQIGPNSF------KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKN 394
N + IG +F + + GK V ++ + ++ +L +++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ + V ++ L +V + GG V D ++ +++ KE + +++ +
Sbjct: 75 IVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVS 514
+ +RDL ++ +LLD N+ + D G + G + + APE+ G
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 515 ETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP----KDCPQILKSL 570
E +V+S G++++ +V+G + + + + R IP DC +LK
Sbjct: 193 EV---DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLLKKF 247
Query: 571 MIKCWNNSPSKRPQFSEII 589
+I +PSKR +I+
Sbjct: 248 LIL----NPSKRGTLEQIM 262
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 112/259 (43%), Gaps = 21/259 (8%)
Query: 341 NLEFIDQIGPNSF------KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKN 394
N + IG +F + + GK V ++ + ++ +L +++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ + V ++ L +V + GG V D ++ +++ KE + +++ +
Sbjct: 75 IVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVS 514
+ +RDL ++ +LLD N+ + D G + G + + APE+ G
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 515 ETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP----KDCPQILKSL 570
E +V+S G++++ +V+G + + + + R IP DC +LK
Sbjct: 193 EV---DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLLKKF 247
Query: 571 MIKCWNNSPSKRPQFSEII 589
+I +PSKR +I+
Sbjct: 248 LIL----NPSKRGTLEQIM 262
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 23/268 (8%)
Query: 339 SDNLEFIDQIGPNSFKGVYKGKRVGIEKL---KGCDKGNAYEFE---LRKDLLELMTCGH 392
+++ E + IG S+ K +R K+ K D G+ E E L ++ L H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 393 KNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSRK----LQTKEIIRIAIDVAEGI 447
NI+++Y +D N L +V + EGG + +I K K L + ++R+ + +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 448 KFLND-----HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGE-ATEYETDGYRWL 501
K + H V +RDL + LD NV LGD G+ + A E+ Y ++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPY-YM 183
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPK 561
+PE + +S S+++S G +++E+ + A S + A I R IP
Sbjct: 184 SPEQM----NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR-RIPY 238
Query: 562 DCPQILKSLMIKCWNNSPSKRPQFSEII 589
L ++ + N RP EI+
Sbjct: 239 RYSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 14/252 (5%)
Query: 345 IDQIGPNSFKGVYKGKRV------GIEKLKGCDKGNAYEFE-LRKDLLELMTCGHKNILQ 397
+ +IG SF VY + V I+K+ K + +++ + K++ L H N +Q
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 398 FYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAY 457
Y C H +V + G + + L + + LQ EI + +G+ +L+ H + +
Sbjct: 119 -YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 177
Query: 458 RDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETW 517
RD+ + ILL G V LGD G + + A + Y W+APE+I E +
Sbjct: 178 RDVKAGNILLSEPGLVKLGDFG---SASIMAPANXFVGTPY-WMAPEVILAMDEGQYDGK 233
Query: 518 MSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNN 577
+ +V+S G+ E+ + + + A IA + ++ + C
Sbjct: 234 V-DVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK 292
Query: 578 SPSKRPQFSEII 589
P RP SE++
Sbjct: 293 IPQDRPT-SEVL 303
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 111/259 (42%), Gaps = 21/259 (8%)
Query: 341 NLEFIDQIGPNSF------KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKN 394
N + IG +F + + GK V + + ++ +L +++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ + V ++ L +V + GG V D ++ +++ KE + +++ +
Sbjct: 75 IVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVS 514
+ +RDL ++ +LLD N+ + D G + G + + APE+ G
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 515 ETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP----KDCPQILKSL 570
E +V+S G++++ +V+G + + + + R IP DC +LK
Sbjct: 193 EV---DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLLKKF 247
Query: 571 MIKCWNNSPSKRPQFSEII 589
+I +PSKR +I+
Sbjct: 248 LIL----NPSKRGTLEQIM 262
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 14/252 (5%)
Query: 345 IDQIGPNSFKGVYKGKRV------GIEKLKGCDKGNAYEFE-LRKDLLELMTCGHKNILQ 397
+ +IG SF VY + V I+K+ K + +++ + K++ L H N +Q
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 398 FYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAY 457
Y C H +V + G + + L + + LQ EI + +G+ +L+ H + +
Sbjct: 80 -YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 138
Query: 458 RDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETW 517
RD+ + ILL G V LGD G + + A + Y W+APE+I E +
Sbjct: 139 RDVKAGNILLSEPGLVKLGDFG---SASIMAPANXFVGTPY-WMAPEVILAMDEGQYDGK 194
Query: 518 MSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNN 577
+ +V+S G+ E+ + + + A IA + ++ + C
Sbjct: 195 V-DVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK 253
Query: 578 SPSKRPQFSEII 589
P RP SE++
Sbjct: 254 IPQDRPT-SEVL 264
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 116/264 (43%), Gaps = 30/264 (11%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFELRKD---LLELMTCGH---- 392
+N E + +G ++ GK + K+ G D G Y ++ K + + T H
Sbjct: 54 ENFELLKVLGTGAY-----GKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTE 108
Query: 393 KNILQFY---CVCVDENHGLCVVTKL------MEGGSVNDLILKSRKLQTKEIIRIAIDV 443
+ +L+ V ++ TKL + GG + + + + E+ ++
Sbjct: 109 RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEI 168
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD---GYRW 500
++ L+ G+ YRD+ + ILLD +G+V L D G+ + + V + TE D +
Sbjct: 169 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGL--SKEFVADETERAYDFCGTIEY 226
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PE 558
+AP+I+ G + + +S G++++E++TG + + + I+ L+ P
Sbjct: 227 MAPDIVRGGDSGHDKA--VDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 284
Query: 559 IPKDCPQILKSLMIKCWNNSPSKR 582
P++ + K L+ + P KR
Sbjct: 285 YPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 111/259 (42%), Gaps = 21/259 (8%)
Query: 341 NLEFIDQIGPNSF------KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKN 394
N + IG +F + + GK V + + ++ +L +++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ + V ++ L +V + GG V D ++ +++ KE + +++ +
Sbjct: 75 IVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVS 514
+ +RDL ++ +LLD N+ + D G + G + + APE+ G
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 515 ETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP----KDCPQILKSL 570
E +V+S G++++ +V+G + + + + R IP DC +LK
Sbjct: 193 EV---DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLLKKF 247
Query: 571 MIKCWNNSPSKRPQFSEII 589
+I +PSKR +I+
Sbjct: 248 LIL----NPSKRGTLEQIM 262
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 117/264 (44%), Gaps = 23/264 (8%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR-----VGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
L D+ E I ++G + V+K V KL + A ++ ++L L C
Sbjct: 6 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 65
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
I+ FY + + + + M+GGS++ ++ K+ ++ + + +++I V +G+ +L
Sbjct: 66 SPYIVGFYGAFYSDGE-ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 452 D-HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDP 510
+ H + +RD+ IL++ G + L D G+ + + + E +++PE + G
Sbjct: 125 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDEMANEFVGTRSYMSPERLQGTH 182
Query: 511 ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
SV S+++S G+ + EM G + + I E P P + SL
Sbjct: 183 YSVQ----SDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVN-----EPPPKLPSAVFSL 233
Query: 571 MI-----KCWNNSPSKRPQFSEII 589
KC +P++R +++
Sbjct: 234 EFQDFVNKCLIKNPAERADLKQLM 257
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 35/226 (15%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKD 383
L++ +N + +++IG ++ VYK G+ V ++K++ G E L K+
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 384 LLELMTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEI 436
L H NI++ V EN V + K M+ ++ + L K ++
Sbjct: 63 L------NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
+ +G+ F + H V +RDL Q +L++ G + L D G+ A +E
Sbjct: 117 L-------QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 169
Query: 497 GYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
+ APEI+ G + +++S G + EMVT A + S
Sbjct: 170 TLWYRAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDS 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 122/305 (40%), Gaps = 23/305 (7%)
Query: 309 PLPSSSFVVSVDEWQTVQSGGEEIGR-WLLNSDNLEFIDQIGPNSFKGVYKGKRVG---I 364
PLPS+ +E + Q E R W L ++ E +G F VY + I
Sbjct: 4 PLPSAPENNPEEELASKQKNEESKKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI 61
Query: 365 EKLKGCDKGN----AYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGS 420
LK K E +LR+++ H NIL+ Y D + ++ + G+
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGT 120
Query: 421 VNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI 480
V + K K + ++A + + + V +RD+ + +LL G + + D G
Sbjct: 121 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 180
Query: 481 VTACKSVGEATEYETDGYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
S T T Y L PE+I G E V +++S G++ +E + G+ +
Sbjct: 181 SVHAPSSRRTTLCGTLDY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPF 232
Query: 539 AACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNI 598
A + + I+ P + + L+ + ++PS+RP E++ T N
Sbjct: 233 EANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 290
Query: 599 SNSSN 603
S SN
Sbjct: 291 SKPSN 295
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 379 ELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIR 438
++++++ L H +I++ Y V + +V + + GG + D I K +++ E R
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQV-ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR 115
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY 498
+ + + + + H V +RDL + +LLD H N + D G+ + S GE
Sbjct: 116 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL-SNMMSDGEFLRTSCGSP 174
Query: 499 RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
+ APE+I+G + E +++S G++++ ++ G +
Sbjct: 175 NYAAPEVISGRLYAGPEV---DIWSCGVILYALLCGTLPF 211
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I IG SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTIGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 59
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 60 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 113
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 114 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 170 RAPEILLGXKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 66
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 67 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 120
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 121 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
APEI+ G + +++S G + EMVT A + S
Sbjct: 177 RAPEILLGXKYYSTAV---DIWSLGCIFAEMVTRRALFPGDS 215
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 119/263 (45%), Gaps = 17/263 (6%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR-----VGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
L D+ E I ++G + V+K V KL + A ++ ++L L C
Sbjct: 22 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 81
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
I+ FY + + + + M+GGS++ ++ K+ ++ + + +++I V +G+ +L
Sbjct: 82 SPYIVGFYGAFYSDGE-ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 140
Query: 452 D-HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDP 510
+ H + +RD+ IL++ G + L D G+ + + + +++PE + G
Sbjct: 141 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTH 198
Query: 511 ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR---PEIPKDCPQI- 566
SV S+++S G+ + EM G + S A + + P++P +
Sbjct: 199 YSVQ----SDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLE 254
Query: 567 LKSLMIKCWNNSPSKRPQFSEII 589
+ + KC +P++R +++
Sbjct: 255 FQDFVNKCLIKNPAERADLKQLM 277
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 21/267 (7%)
Query: 339 SDNLEFIDQIGPNSFKGVYKGKRVGIEKL---KGCDKGNAYEFE---LRKDLLELMTCGH 392
+++ E + IG S+ K +R K+ K D G+ E E L ++ L H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 393 KNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSRK----LQTKEIIRIAIDVAEGI 447
NI+++Y +D N L +V + EGG + +I K K L + ++R+ + +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 448 KFLND-----HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLA 502
K + H V +RDL + LD NV LGD G+ + +++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMS 184
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKD 562
PE + +S S+++S G +++E+ + A S + A I R IP
Sbjct: 185 PEQM----NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR-RIPYR 239
Query: 563 CPQILKSLMIKCWNNSPSKRPQFSEII 589
L ++ + N RP EI+
Sbjct: 240 YSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 6/184 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
L V + GG + + + R A ++A + +L+ + YRDL + ILLD
Sbjct: 114 LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD 173
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVI 528
G++ L D G+ T +LAPE++ P + W + G V+
Sbjct: 174 SQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDW----WCLGAVL 229
Query: 529 WEMVTGEAAYAACSPVQAAVGI--AACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+EM+ G + + + + I L+P I +L+ L+ K + F
Sbjct: 230 YEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 289
Query: 587 EIIS 590
EI S
Sbjct: 290 EIKS 293
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRI 439
L +++ L H NI++ Y D+ + +V ++ GG + D I+ ++ + RI
Sbjct: 97 LLREVQLLKQLDHPNIMKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAARI 155
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLD---RHGNVCLGDMGIVTACKSVGEATEYETD 496
V GI +++ + + +RDL + +LL+ + N+ + D G+ T ++ + +
Sbjct: 156 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 215
Query: 497 GYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR 556
Y ++APE++ G + + W S G++++ +++G + + +
Sbjct: 216 AY-YIAPEVLHGTYDEKCDVW-----STGVILYILLSGCPPFNGANEYDILKKVEKGKYT 269
Query: 557 PEIP--KDCPQILKSLMIKCWNNSPSKR 582
E+P K + K L+ K PS R
Sbjct: 270 FELPQWKKVSESAKDLIRKMLTYVPSMR 297
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 21/267 (7%)
Query: 339 SDNLEFIDQIGPNSFKGVYKGKRVGIEKL---KGCDKGNAYEFE---LRKDLLELMTCGH 392
+++ E + IG S+ K +R K+ K D G+ E E L ++ L H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 393 KNILQFYCVCVDE-NHGLCVVTKLMEGGSVNDLILKSRK----LQTKEIIRIAIDVAEGI 447
NI+++Y +D N L +V + EGG + +I K K L + ++R+ + +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 448 KFLND-----HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLA 502
K + H V +RDL + LD NV LGD G+ + +++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 184
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKD 562
PE + +S S+++S G +++E+ + A S + A I R IP
Sbjct: 185 PEQM----NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR-RIPYR 239
Query: 563 CPQILKSLMIKCWNNSPSKRPQFSEII 589
L ++ + N RP EI+
Sbjct: 240 YSDELNEIITRMLNLKDYHRPSVEEIL 266
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRI 439
L +++ L H NI++ Y D+ + +V ++ GG + D I+ ++ + RI
Sbjct: 96 LLREVQLLKQLDHPNIMKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAARI 154
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLD---RHGNVCLGDMGIVTACKSVGEATEYETD 496
V GI +++ + + +RDL + +LL+ + N+ + D G+ T ++ + +
Sbjct: 155 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 214
Query: 497 GYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR 556
Y ++APE++ G + + W S G++++ +++G + + +
Sbjct: 215 AY-YIAPEVLHGTYDEKCDVW-----STGVILYILLSGCPPFNGANEYDILKKVEKGKYT 268
Query: 557 PEIP--KDCPQILKSLMIKCWNNSPSKR 582
E+P K + K L+ K PS R
Sbjct: 269 FELPQWKKVSESAKDLIRKMLTYVPSMR 296
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 91/201 (45%), Gaps = 12/201 (5%)
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
L H NI++ Y D+ + +V ++ GG + D I+ ++ + RI V G
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 447 IKFLNDHGVAYRDLNSQRILLD---RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAP 503
I +++ + + +RDL + +LL+ + N+ + D G+ T ++ + + Y ++AP
Sbjct: 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY-YIAP 197
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP--K 561
E++ G + + W S G++++ +++G + + + E+P K
Sbjct: 198 EVLHGTYDEKCDVW-----STGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 252
Query: 562 DCPQILKSLMIKCWNNSPSKR 582
+ K L+ K PS R
Sbjct: 253 KVSESAKDLIRKMLTYVPSMR 273
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 346 DQIGPNSFKGVYKG----KRVGIEKLKGCDKGNAYEF--ELRKDLLELMTCGHKNILQFY 399
++ G F VYKG V ++KL E + +++ C H+N+++
Sbjct: 28 NKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELL 87
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLIL---KSRKLQTKEIIRIAIDVAEGIKFLNDHGVA 456
D + LC+V GS+ D + + L +IA A GI FL+++
Sbjct: 88 GFSSDGD-DLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHI 146
Query: 457 YRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE--TDGYRWLAPEIIAGDPESVS 514
+RD+ S ILLD + D G+ A + + + APE + G+
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEI---- 202
Query: 515 ETWMSNVYSFGMVIWEMVTGEAA 537
T S++YSFG+V+ E++TG A
Sbjct: 203 -TPKSDIYSFGVVLLEIITGLPA 224
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRI 439
L +++ L H NI++ Y D+ + +V ++ GG + D I+ ++ + RI
Sbjct: 79 LLREVQLLKQLDHPNIMKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAARI 137
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLD---RHGNVCLGDMGIVTACKSVGEATEYETD 496
V GI +++ + + +RDL + +LL+ + N+ + D G+ T ++ + +
Sbjct: 138 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 197
Query: 497 GYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR 556
Y ++APE++ G + + W S G++++ +++G + + +
Sbjct: 198 AY-YIAPEVLHGTYDEKCDVW-----STGVILYILLSGCPPFNGANEYDILKKVEKGKYT 251
Query: 557 PEIP--KDCPQILKSLMIKCWNNSPSKR 582
E+P K + K L+ K PS R
Sbjct: 252 FELPQWKKVSESAKDLIRKMLTYVPSMR 279
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR-----VGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
L D+ E I ++G + V+K V KL + A ++ ++L L C
Sbjct: 65 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 124
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
I+ FY + + + + M+GGS++ ++ K+ ++ + + +++I V +G+ +L
Sbjct: 125 SPYIVGFYGAFYSDGE-ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 183
Query: 452 D-HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDP 510
+ H + +RD+ IL++ G + L D G+ + + + +++PE + G
Sbjct: 184 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTH 241
Query: 511 ESVSETWMSNVYSFGMVIWEMVTG 534
SV S+++S G+ + EM G
Sbjct: 242 YSVQ----SDIWSMGLSLVEMAVG 261
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 379 ELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIR 438
++++++ L H +I++ Y V + +V + + GG + D I K +++ E R
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQV-ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR 115
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY 498
+ + + + + H V +RDL + +LLD H N + D G+ + S GE
Sbjct: 116 LFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL-SNMMSDGEFLRDSCGSP 174
Query: 499 RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
+ APE+I+G + E +++S G++++ ++ G +
Sbjct: 175 NYAAPEVISGRLYAGPEV---DIWSCGVILYALLCGTLPF 211
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 110/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 48 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 105
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 106 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 165
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V AT
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGATWTLCGT 222
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 223 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 278
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 279 PSHFSSDLKDLLRNLL 294
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIK 448
+ H++++ F+ ++N + VV +L S+ +L + + L E + G +
Sbjct: 97 SLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 155
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAG 508
+L+ + V +RDL + L+ V +GD G+ T + GE + ++APE+++
Sbjct: 156 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK 215
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILK 568
++ +V+S G +++ ++ G+ + + + I IPK +
Sbjct: 216 K----GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHINPVAA 269
Query: 569 SLMIKCWNNSPSKRPQFSEIIS 590
SL+ K P+ RP +E+++
Sbjct: 270 SLIQKMLQTDPTARPTINELLN 291
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIK 448
+ H++++ F+ ++N + VV +L S+ +L + + L E + G +
Sbjct: 95 SLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 153
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAG 508
+L+ + V +RDL + L+ V +GD G+ T + GE + ++APE+++
Sbjct: 154 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK 213
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILK 568
++ +V+S G +++ ++ G+ + + + I IPK +
Sbjct: 214 K----GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHINPVAA 267
Query: 569 SLMIKCWNNSPSKRPQFSEIIS 590
SL+ K P+ RP +E+++
Sbjct: 268 SLIQKMLQTDPTARPTINELLN 289
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIK 448
+ H++++ F+ ++N + VV +L S+ +L + + L E + G +
Sbjct: 73 SLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 131
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAG 508
+L+ + V +RDL + L+ V +GD G+ T + GE + ++APE+++
Sbjct: 132 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILK 568
++ +V+S G +++ ++ G+ + + + I IPK +
Sbjct: 192 K----GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHINPVAA 245
Query: 569 SLMIKCWNNSPSKRPQFSEIIS 590
SL+ K P+ RP +E+++
Sbjct: 246 SLIQKMLQTDPTARPTINELLN 267
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 59
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 60 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 113
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 114 ----QGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 170 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIK 448
+ H++++ F+ ++N + VV +L S+ +L + + L E + G +
Sbjct: 71 SLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 129
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAG 508
+L+ + V +RDL + L+ V +GD G+ T + GE + ++APE+++
Sbjct: 130 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSK 189
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILK 568
++ +V+S G +++ ++ G+ + + + I IPK +
Sbjct: 190 K----GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHINPVAA 243
Query: 569 SLMIKCWNNSPSKRPQFSEIIS 590
SL+ K P+ RP +E+++
Sbjct: 244 SLIQKMLQTDPTARPTINELLN 265
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 113/263 (42%), Gaps = 21/263 (7%)
Query: 337 LNSDNLEFIDQIGPNSF------KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC 390
L+ N + IG +F + + GK V ++ + ++ +L +++ +
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL 63
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
H NI++ + V ++ L +V + GG V D ++ ++ KE + +++
Sbjct: 64 NHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYC 122
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDP 510
+ + +RDL ++ +LLD N+ + D G + G + + APE+ G
Sbjct: 123 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 511 ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP----KDCPQI 566
E +V+S G++++ +V+G + + + + R IP DC +
Sbjct: 182 YDGPEV---DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENL 236
Query: 567 LKSLMIKCWNNSPSKRPQFSEII 589
LK +I +PSKR +I+
Sbjct: 237 LKKFLIL----NPSKRGTLEQIM 255
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 59
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 60 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 113
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 114 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 170 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIK 448
+ H++++ F+ ++N + VV +L S+ +L + + L E + G +
Sbjct: 77 SLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 135
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAG 508
+L+ + V +RDL + L+ V +GD G+ T + GE + ++APE+++
Sbjct: 136 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 195
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILK 568
++ +V+S G +++ ++ G+ + + + I IPK +
Sbjct: 196 K----GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHINPVAA 249
Query: 569 SLMIKCWNNSPSKRPQFSEIIS 590
SL+ K P+ RP +E+++
Sbjct: 250 SLIQKMLQTDPTARPTINELLN 271
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 61
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 62 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 115
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 116 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 172 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 60
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 61 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 114
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 115 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 170
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 171 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 60
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 61 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 114
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 115 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 171 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 59
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 60 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 113
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 114 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 170 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIK 448
+ H++++ F+ ++N + VV +L S+ +L + + L E + G +
Sbjct: 73 SLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 131
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAG 508
+L+ + V +RDL + L+ V +GD G+ T + GE + ++APE+++
Sbjct: 132 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILK 568
++ +V+S G +++ ++ G+ + + + I IPK +
Sbjct: 192 K----GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIPKHINPVAA 245
Query: 569 SLMIKCWNNSPSKRPQFSEIIS 590
SL+ K P+ RP +E+++
Sbjct: 246 SLIQKMLQTDPTARPTINELLN 267
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 58
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 59 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 112
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 113 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 169 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 59
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 60 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 113
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 114 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 170 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 66
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 67 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 120
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 121 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
APEI+ G + +++S G + EMVT A + S
Sbjct: 177 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDS 215
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 62
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 63 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 116
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 117 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 173 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 61
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 62 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 115
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 116 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 172 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 58
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 59 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 112
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 113 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 169 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 58
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 59 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 112
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 113 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 169 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 35/226 (15%)
Query: 338 NSDNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLL 385
+ +N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 2 HMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 60
Query: 386 ELMTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIR 438
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 61 -----NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL- 114
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY 498
+G+ F + H V +RDL Q +L++ G + L D G+ A +E
Sbjct: 115 ------QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 499 RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
+ APEI+ G + +++S G + EMVT A + S +
Sbjct: 169 WYRAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 59
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 60 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 113
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 114 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 170 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 59
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 60 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 113
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 114 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 170 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 59
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 60 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 113
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 114 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 170 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 62
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 63 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 116
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 117 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 173 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 58
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 59 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 112
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 113 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 169 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 63
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 64 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 117
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 118 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 173
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 174 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 214
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLAGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLXGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 62
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 63 ---NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLL--- 116
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 117 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 173 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 42 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 210
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 211 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 267 KDLLRNLL 274
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + K K + GN Y ++ ++ +++L H K
Sbjct: 42 DQFERIKTLGTGSFG------RVMLVKHK--ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 210
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 211 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 267 KDLLRNLL 274
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR-----VGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
L D+ E I ++G + V+K V KL + A ++ ++L L C
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
I+ FY + + + + M+GGS++ ++ K+ ++ + + +++I V +G+ +L
Sbjct: 63 SPYIVGFYGAFYSDGE-ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 452 D-HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDP 510
+ H + +RD+ IL++ G + L D G+ + + + +++PE + G
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTH 179
Query: 511 ESVSETWMSNVYSFGMVIWEMVTG 534
SV S+++S G+ + EM G
Sbjct: 180 YSVQ----SDIWSMGLSLVEMAVG 199
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 109/258 (42%), Gaps = 21/258 (8%)
Query: 341 NLEFIDQIGPNSF------KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKN 394
N + IG +F + + GK V ++ + ++ +L +++ H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I++ + V ++ L +V + GG V D ++ + + KE + +++ +
Sbjct: 75 IVKLFEV-IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 455 VAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVS 514
+ +RDL ++ +LLD N+ + D G + G + + APE+ G
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 515 ETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP----KDCPQILKSL 570
E +V+S G++++ +V+G + + + + R IP DC +LK
Sbjct: 193 EV---DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYXSTDCENLLKKF 247
Query: 571 MIKCWNNSPSKRPQFSEI 588
+I +PSKR +I
Sbjct: 248 LIL----NPSKRGTLEQI 261
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR-----VGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
L D+ E I ++G + V+K V KL + A ++ ++L L C
Sbjct: 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 89
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
I+ FY + + + + M+GGS++ ++ K+ ++ + + +++I V +G+ +L
Sbjct: 90 SPYIVGFYGAFYSDGE-ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 148
Query: 452 D-HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDP 510
+ H + +RD+ IL++ G + L D G+ + + + +++PE + G
Sbjct: 149 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTH 206
Query: 511 ESVSETWMSNVYSFGMVIWEMVTG 534
SV S+++S G+ + EM G
Sbjct: 207 YSVQ----SDIWSMGLSLVEMAVG 226
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 42 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 210
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 211 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 267 KDLLRNLL 274
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V + K++ G E L K+L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL--- 59
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 60 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 113
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 114 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 170 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V + K++ G E L K+L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL--- 58
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 59 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 112
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 113 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 169 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 42 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWTLCGTPEYLAPEI 210
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 211 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 267 KDLLRNLL 274
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + K K + GN Y ++ ++ +++L H K
Sbjct: 62 DQFERIKTLGTGSFG------RVMLVKHK--ETGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 173
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 230
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 231 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 286
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 287 KDLLRNLL 294
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + K K + GN Y ++ ++ +++L H K
Sbjct: 42 DQFERIKTLGTGSFG------RVMLVKHK--ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 210
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 211 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 267 KDLLRNLL 274
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR-----VGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
L D+ E I ++G + V+K V KL + A ++ ++L L C
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
I+ FY + + + + M+GGS++ ++ K+ ++ + + +++I V +G+ +L
Sbjct: 63 SPYIVGFYGAFYSDGE-ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 452 D-HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDP 510
+ H + +RD+ IL++ G + L D G+ + + + +++PE + G
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTH 179
Query: 511 ESVSETWMSNVYSFGMVIWEMVTG 534
SV S+++S G+ + EM G
Sbjct: 180 YSVQ----SDIWSMGLSLVEMAVG 199
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + K K + GN Y ++ ++ +++L H K
Sbjct: 34 DQFERIKTLGTGSFG------RVMLVKHK--ETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 145
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 202
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 203 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 258
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 259 KDLLRNLL 266
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + K K + GN Y ++ ++ +++L H K
Sbjct: 42 DQFERIKTLGTGSFG------RVMLVKHK--ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 210
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 211 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 267 KDLLRNLL 274
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + K K + GN Y ++ ++ +++L H K
Sbjct: 34 DQFERIKTLGTGSFG------RVMLVKHK--ETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 145
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 202
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 203 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 258
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 259 KDLLRNLL 266
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR-----VGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
L D+ E I ++G + V+K V KL + A ++ ++L L C
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
I+ FY + + + + M+GGS++ ++ K+ ++ + + +++I V +G+ +L
Sbjct: 63 SPYIVGFYGAFYSDGE-ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 452 D-HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDP 510
+ H + +RD+ IL++ G + L D G+ + + + +++PE + G
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTH 179
Query: 511 ESVSETWMSNVYSFGMVIWEMVTG 534
SV S+++S G+ + EM G
Sbjct: 180 YSVQ----SDIWSMGLSLVEMAVG 199
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 27 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 78
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 79 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 138
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 139 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWTLCGTPEYLAPEI 195
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 196 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 251
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 252 KDLLRNLL 259
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H NI+ V D+ + VVT+LM+GG + D IL+ + +E + + + +++L+
Sbjct: 75 HPNIITLKDV-YDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 452 DHGVAYRDLNSQRIL-LDRHGN---VCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIA 507
GV +RDL IL +D GN + + D G ++ ++APE++
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL- 192
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVTGEAAYA 539
E +++S G++++ M+TG +A
Sbjct: 193 ---ERQGYDAACDIWSLGVLLYTMLTGYTPFA 221
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 28 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 85
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 145
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 202
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 203 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 259 PSHFSSDLKDLLRNLL 274
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 12/201 (5%)
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
L H NI + Y D+ + +V ++ GG + D I+ ++ + RI V G
Sbjct: 80 LKQLDHPNIXKLYEFFEDKGY-FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 447 IKFLNDHGVAYRDLNSQRILLD---RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAP 503
I + + + + +RDL + +LL+ + N+ + D G+ T ++ + + Y ++AP
Sbjct: 139 ITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAY-YIAP 197
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP--K 561
E++ G + + W S G++++ +++G + + + E+P K
Sbjct: 198 EVLHGTYDEKCDVW-----STGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 252
Query: 562 DCPQILKSLMIKCWNNSPSKR 582
+ K L+ K PS R
Sbjct: 253 KVSESAKDLIRKXLTYVPSXR 273
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR-----VGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
L D+ E I ++G + V+K V KL + A ++ ++L L C
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
I+ FY + + + + M+GGS++ ++ K+ ++ + + +++I V +G+ +L
Sbjct: 63 SPYIVGFYGAFYSDGE-ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 452 D-HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDP 510
+ H + +RD+ IL++ G + L D G+ + + + +++PE + G
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTH 179
Query: 511 ESVSETWMSNVYSFGMVIWEMVTG 534
SV S+++S G+ + EM G
Sbjct: 180 YSVQ----SDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR-----VGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
L D+ E I ++G + V+K V KL + A ++ ++L L C
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
I+ FY + + + + M+GGS++ ++ K+ ++ + + +++I V +G+ +L
Sbjct: 63 SPYIVGFYGAFYSDGE-ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 452 D-HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDP 510
+ H + +RD+ IL++ G + L D G+ + + + +++PE + G
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSPERLQGTH 179
Query: 511 ESVSETWMSNVYSFGMVIWEMVTG 534
SV S+++S G+ + EM G
Sbjct: 180 YSVQ----SDIWSMGLSLVEMAVG 199
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
L + LM GG ++ + + ++ A ++ G++ +++ V YRDL ILLD
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD 326
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII-AGDPESVSETWMSNVYSFGMV 527
HG+V + D+G+ AC + + ++APE++ G S W +S G +
Sbjct: 327 EHGHVRISDLGL--ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW----FSLGCM 380
Query: 528 IWEMVTGEAAY 538
+++++ G + +
Sbjct: 381 LFKLLRGHSPF 391
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
L + LM GG ++ + + ++ A ++ G++ +++ V YRDL ILLD
Sbjct: 266 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD 325
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII-AGDPESVSETWMSNVYSFGMV 527
HG+V + D+G+ AC + + ++APE++ G S W +S G +
Sbjct: 326 EHGHVRISDLGL--ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW----FSLGCM 379
Query: 528 IWEMVTGEAAY 538
+++++ G + +
Sbjct: 380 LFKLLRGHSPF 390
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 62
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 63 ---NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL--- 116
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL + +L++ G + L D G+ A +E +
Sbjct: 117 ----QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 173 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
L + LM GG ++ + + ++ A ++ G++ +++ V YRDL ILLD
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD 326
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII-AGDPESVSETWMSNVYSFGMV 527
HG+V + D+G+ AC + + ++APE++ G S W +S G +
Sbjct: 327 EHGHVRISDLGL--ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW----FSLGCM 380
Query: 528 IWEMVTGEAAY 538
+++++ G + +
Sbjct: 381 LFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
L + LM GG ++ + + ++ A ++ G++ +++ V YRDL ILLD
Sbjct: 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD 326
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII-AGDPESVSETWMSNVYSFGMV 527
HG+V + D+G+ AC + + ++APE++ G S W +S G +
Sbjct: 327 EHGHVRISDLGL--ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW----FSLGCM 380
Query: 528 IWEMVTGEAAY 538
+++++ G + +
Sbjct: 381 LFKLLRGHSPF 391
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 48 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 105
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 106 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR 165
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 222
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 223 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 278
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 279 PSHFSSDLKDLLRNLL 294
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 60
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 61 ---NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL--- 114
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL + +L++ G + L D G+ A +E +
Sbjct: 115 ----QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 171 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 22 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 79
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 80 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR 139
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 140 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 196
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 197 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 252
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 253 PSHFSSDLKDLLRNLL 268
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 94/200 (47%), Gaps = 29/200 (14%)
Query: 353 FKGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYC---VCVDENHGL 409
++G++ G+ V ++ D+ + + ++ + H NIL F + + L
Sbjct: 25 WRGLWHGESVAVKIFSSRDEQSWFR---ETEIYNTVLLRHDNILGFIASDMTSRNSSTQL 81
Query: 410 CVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN--------DHGVAYRDLN 461
++T E GS+ D L+ + L+ +R+A+ A G+ L+ +A+RD
Sbjct: 82 WLITHYHEHGSLYDF-LQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFK 140
Query: 462 SQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG-------YRWLAPEIIAGDPES-- 512
S+ +L+ + C+ D+G+ + ++Y G R++APE++ +
Sbjct: 141 SRNVLVKSNLQCCIADLGLAVMH---SQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDC 197
Query: 513 -VSETWMSNVYSFGMVIWEM 531
S W +++++FG+V+WE+
Sbjct: 198 FESYKW-TDIWAFGLVLWEI 216
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 127
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T T
Sbjct: 128 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 187
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 188 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 239
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 240 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 286
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G V + K K +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPRGEVYKELQKLSKFDEQRT 115
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T T
Sbjct: 116 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 175
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 176 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 228 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 60
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 61 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 114
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL + +L++ G + L D G+ A +E +
Sbjct: 115 ----QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 171 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 211
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +++D+ G + + D G+ K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGL---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 61
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + K M+ ++ + L K +++
Sbjct: 62 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL--- 115
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL + +L++ G + L D G+ A +E +
Sbjct: 116 ----QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 172 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +++D+ G + + D G+ K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGL---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 111
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T T
Sbjct: 112 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTL 171
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 172 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 224 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 270
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 121/305 (39%), Gaps = 23/305 (7%)
Query: 309 PLPSSSFVVSVDEWQTVQSGGEEIGR-WLLNSDNLEFIDQIGPNSFKGVYKGKRVG---I 364
PLPS+ +E + Q E R W L ++ E +G F VY + I
Sbjct: 4 PLPSAPENNPEEELASKQKNEESKKRQWAL--EDFEIGRPLGKGKFGNVYLAREKQSKFI 61
Query: 365 EKLKGCDKGN----AYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGS 420
LK K E +LR+++ H NIL+ Y D + ++ + G+
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGT 120
Query: 421 VNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI 480
V + K K + ++A + + + V +RD+ + +LL G + + D G
Sbjct: 121 VYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 180
Query: 481 VTACKSVGEATEYETDGYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
S T Y L PE+I G E V +++S G++ +E + G+ +
Sbjct: 181 SVHAPSSRRDDLCGTLDY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPF 232
Query: 539 AACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNI 598
A + + I+ P + + L+ + ++PS+RP E++ T N
Sbjct: 233 EANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 290
Query: 599 SNSSN 603
S SN
Sbjct: 291 SKPSN 295
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 115
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T T
Sbjct: 116 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 175
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 176 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 228 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T T
Sbjct: 111 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 170
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 171 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 223 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T T
Sbjct: 114 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 173
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 174 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 226 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +++D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +++D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 123/271 (45%), Gaps = 26/271 (9%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKRVGIEK----------LKGCDKGNAYEFELRKDLLE 386
+ +++L F + +G +F ++KG R + LK DK + E +
Sbjct: 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAAS 64
Query: 387 LMT-CGHKNILQFY--CVCVDENHGLCVVTKLMEGGSVNDLILKSRK-LQTKEIIRIAID 442
+M+ HK+++ Y CVC DEN +V + ++ GS++ + K++ + + +A
Sbjct: 65 MMSKLSHKHLVLNYGVCVCGDEN---ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQ 121
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR--- 499
+A + FL ++ + + ++ ++ ILL R + G+ + T D +
Sbjct: 122 LAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI 181
Query: 500 -WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPE 558
W+ PE I +P++++ ++ +SFG +WE+ +G S + + + R +
Sbjct: 182 PWVPPECIE-NPKNLN--LATDKWSFGTTLWEICSG--GDKPLSALDSQRKLQFYEDRHQ 236
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
+P L +L+ C + P RP F II
Sbjct: 237 LPAPKAAELANLINNCMDYEPDHRPSFRAII 267
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + K K + GN + ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVMLVKHK--ETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 14 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 71
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 72 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 131
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D G + + D G K V T
Sbjct: 132 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGF---AKRVKGRTWXLCGT 188
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 189 PEYLAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 244
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 245 PSHFSSDLKDLLRNLL 260
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +++D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 44/253 (17%)
Query: 312 SSSFVVSVDEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKG----------KR 361
SSS++V + ++ EE ++N + IG F VYKG KR
Sbjct: 17 SSSYLVPFESYRVPLVDLEEA------TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR 70
Query: 362 VGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV 421
E +G ++ L C H +++ C DE + + ++ K ME G++
Sbjct: 71 RTPESSQGIEEFETEIETLS-------FCRHPHLVSLIGFC-DERNEMILIYKYMENGNL 122
Query: 422 NDLI----LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGD 477
+ L + + ++ + I I A G+ +L+ + +RD+ S ILLD + + D
Sbjct: 123 KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITD 182
Query: 478 MGIVTACKSVGEATEYE----TDGYRWLAPEIIAGDPESVSE---TWMSNVYSFGMVIWE 530
GI +G+ T GY DPE + T S+VYSFG+V++E
Sbjct: 183 FGISKKGTELGQTHLXXVVKGTLGYI---------DPEYFIKGRLTEKSDVYSFGVVLFE 233
Query: 531 MVTGEAAYAACSP 543
++ +A P
Sbjct: 234 VLCARSAIVQSLP 246
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 42 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 394 NILQ-----FYC---VCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ F +N L +V + GG + + + + A +
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +++D+ G + + D G K V T +LAPEI
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 210
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 211 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 267 KDLLRNLL 274
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 110/262 (41%), Gaps = 27/262 (10%)
Query: 341 NLEFIDQIGPNSF------KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLE---LMTCG 391
N + IG +F + + G+ V I K DK L+K E +
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAI---KIIDKTQLNPTSLQKLFREVRIMKILN 69
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H NI++ + V ++ L ++ + GG V D ++ +++ KE + +++ +
Sbjct: 70 HPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPE 511
+ +RDL ++ +LLD N+ + D G +VG + + APE+ G
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF-TVGGKLDTFCGSPPYAAPELFQGKKY 187
Query: 512 SVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP----KDCPQIL 567
E +V+S G++++ +V+G + + + + R IP DC +L
Sbjct: 188 DGPEV---DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLL 242
Query: 568 KSLMIKCWNNSPSKRPQFSEII 589
K ++ +P KR +I+
Sbjct: 243 KRFLVL----NPIKRGTLEQIM 260
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 110/262 (41%), Gaps = 27/262 (10%)
Query: 341 NLEFIDQIGPNSF------KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLE---LMTCG 391
N + IG +F + + G+ V I K DK L+K E +
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAI---KIIDKTQLNPTSLQKLFREVRIMKILN 72
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H NI++ + V ++ L ++ + GG V D ++ +++ KE + +++ +
Sbjct: 73 HPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 131
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPE 511
+ +RDL ++ +LLD N+ + D G +VG + + APE+ G
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF-TVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 512 SVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP----KDCPQIL 567
E +V+S G++++ +V+G + + + + R IP DC +L
Sbjct: 191 DGPEV---DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLL 245
Query: 568 KSLMIKCWNNSPSKRPQFSEII 589
K ++ +P KR +I+
Sbjct: 246 KRFLVL----NPIKRGTLEQIM 263
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + K K + GN Y ++ ++ +++L H K
Sbjct: 42 DQFERIKTLGTGSFG------RVMLVKHK--ETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + GG + + + + A +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +++D+ G + + D G K V T +LAPEI
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 210
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 211 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 267 KDLLRNLL 274
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + K K + GN + ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVMLVKHK--ETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +++D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPEIIISKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 62
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + M+ ++ + L K +++
Sbjct: 63 ---NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL--- 116
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 117 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 173 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWL 501
+++ + L+ G+ YRDL + I+L+ G+V L D G+ G T ++
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYM 188
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEI 559
APEI+ + + W +S G ++++M+TG + + + I C L P +
Sbjct: 189 APEILMRSGHNRAVDW----WSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYL 244
Query: 560 PKDCPQILKSLM 571
++ +LK L+
Sbjct: 245 TQEARDLLKKLL 256
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 61
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + M+ ++ + L K +++
Sbjct: 62 ---NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL--- 115
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 116 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 172 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 212
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWL 501
+++ + L+ G+ YRDL + I+L+ G+V L D G+ G T ++
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYM 188
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEI 559
APEI+ + + W +S G ++++M+TG + + + I C L P +
Sbjct: 189 APEILMRSGHNRAVDW----WSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYL 244
Query: 560 PKDCPQILKSLM 571
++ +LK L+
Sbjct: 245 TQEARDLLKKLL 256
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 42 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 394 NILQ-----FYC---VCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ F +N L +V + GG + + + + A +
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +++D+ G + + D G K V T +LAPEI
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 210
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 211 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 267 KDLLRNLL 274
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + +K + GN Y ++ ++ +++L H K
Sbjct: 42 DQFERIKTLGTGSFG------RVML--VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 394 NILQ-----FYC---VCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ F +N L +V + GG + + + + A +
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +++D+ G + + D G K V T +LAPEI
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 210
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 211 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 266
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 267 KDLLRNLL 274
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 62
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + M+ ++ + L K +++
Sbjct: 63 ---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLL--- 116
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 117 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 173 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 213
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 58
Query: 388 MTCGHKNILQFYCVCVDENHGLCV-------VTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
H NI++ V EN V + M+ ++ + L K +++
Sbjct: 59 ---NHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLL--- 112
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
+G+ F + H V +RDL Q +L++ G + L D G+ A +E +
Sbjct: 113 ----QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 501 LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
APEI+ G + +++S G + EMVT A + S +
Sbjct: 169 RAPEILLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 209
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAPEII + + W ++ G++I++M G + A P+Q I + +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDW----WALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 31/248 (12%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMTCGH----K 393
D E I +G SF RV + K K + GN + ++ ++ +++L H K
Sbjct: 41 DQFERIKTLGTGSFG------RVMLVKHK--ETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 394 NILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
ILQ + V ++ +N L +V + + GG + + + + A +
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
++L+ + YRDL + +L+D+ G + + D G K V T +LAPEI
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEYLAPEI 209
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDC 563
I + + W ++ G++I+EM G + A P+Q I + +R D
Sbjct: 210 ILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 564 PQILKSLM 571
+L++L+
Sbjct: 266 KDLLRNLL 273
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S A T
Sbjct: 114 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 173
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 174 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 226 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 29/253 (11%)
Query: 319 VDEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKG--KRVGIE----KLKGCDK 372
++E +T G GR+L +F +IG SFK VYKG +E +L+
Sbjct: 11 IEELETKAVGXSNDGRFL------KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL 64
Query: 373 GNAYEFELRKDLLELMTCGHKNILQFYCV---CVDENHGLCVVTKLMEGGSVNDLILKSR 429
+ +++ L H NI++FY V + +VT+L G++ + + +
Sbjct: 65 TKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK 124
Query: 430 KLQTKEIIRIAIDVAEGIKFLNDHG--VAYRDLNSQRILLD-RHGNVCLGDMGIVTACKS 486
+ K + + +G++FL+ + +RDL I + G+V +GD+G+ T ++
Sbjct: 125 VXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184
Query: 487 VGEATEYETDGYRWLAPEIIAGDPESVSETWMS--NVYSFGMVIWEMVTGEAAYAACSPV 544
T PE A PE E + +VY+FG E T E Y+ C
Sbjct: 185 SFAKAVIGT-------PEFXA--PEXYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNA 235
Query: 545 QAAVGIAACGLRP 557
G++P
Sbjct: 236 AQIYRRVTSGVKP 248
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 93/227 (40%), Gaps = 9/227 (3%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 115
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T T
Sbjct: 116 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 175
Query: 497 GYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR 556
Y L PE I G +++S G++ +E + G+ + A + + I+
Sbjct: 176 DY--LPPEXIEGRXHDEK----VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF- 228
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 229 -TFPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITANSSKPSN 274
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKR-----VGIEKLKGCDKGNAYEFELRKDLLELMTCG 391
L D+ E I ++G + V K + + KL + A ++ ++L L C
Sbjct: 13 LKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN 72
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
I+ FY + + + + M+GGS++ ++ +++++ + + +++I V G+ +L
Sbjct: 73 SPYIVGFYGAFYSDGE-ISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 452 D-HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDP 510
+ H + +RD+ IL++ G + L D G+ + + + ++APE + G
Sbjct: 132 EKHQIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMAPERLQGTH 189
Query: 511 ESVSETWMSNVYSFGMVIWEMVTG 534
SV S+++S G+ + E+ G
Sbjct: 190 YSVQ----SDIWSMGLSLVELAVG 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 94/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G V + K K +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPRGEVYKELQKLSKFDEQRT 115
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T
Sbjct: 116 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTL 175
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 176 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 227
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 228 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRI 439
+ +++ L H +I++ Y V ++ + V+ G + D I++ K+ +E R
Sbjct: 60 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE--YAGNELFDYIVQRDKMSEQEARRF 117
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR 499
+ +++ + H + +RDL + +LLD H NV + D G+ + + G +
Sbjct: 118 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL-SNIMTDGNFLKTSCGSPN 176
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMV 532
+ APE+I+G + E +V+S G++++ M+
Sbjct: 177 YAAPEVISGKLYAGPEV---DVWSCGVILYVML 206
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 41/264 (15%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K G
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----------G 193
Query: 498 YRW--------LAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVG 549
W LAPEII + + W ++ G++I+EM G + A P+Q
Sbjct: 194 RTWXLCGTPEALAPEIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEK 249
Query: 550 IAACGLR--PEIPKDCPQILKSLM 571
I + +R D +L++L+
Sbjct: 250 IVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 111
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T T
Sbjct: 112 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTL 171
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 172 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 223
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 224 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 270
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRI 439
+ +++ L H +I++ Y V ++ + V+ G + D I++ K+ +E R
Sbjct: 61 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE--YAGNELFDYIVQRDKMSEQEARRF 118
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR 499
+ +++ + H + +RDL + +LLD H NV + D G+ + + G +
Sbjct: 119 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL-SNIMTDGNFLKTSCGSPN 177
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMV 532
+ APE+I+G + E +V+S G++++ M+
Sbjct: 178 YAAPEVISGKLYAGPEV---DVWSCGVILYVML 207
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 18/189 (9%)
Query: 364 IEKLKGCDKGNAYEFELRKDLLELMTC-GHKNILQFYCVCVDENHGLCVVTKLMEGGSVN 422
IEK G + + +++ L C G+KNIL+ D+ V KL +GGS+
Sbjct: 46 IEKQAGHSRSRVF-----REVETLYQCQGNKNILELIEFFEDDTRFYLVFEKL-QGGSIL 99
Query: 423 DLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV-----CLGD 477
I K + +E R+ DVA + FL+ G+A+RDL + IL + V C D
Sbjct: 100 AHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFD 159
Query: 478 MG----IVTACKSVGEATEYETDG-YRWLAPEII-AGDPESVSETWMSNVYSFGMVIWEM 531
+G + +C + G ++APE++ ++ +++S G+V++ M
Sbjct: 160 LGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIM 219
Query: 532 VTGEAAYAA 540
++G +
Sbjct: 220 LSGYPPFVG 228
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 22/233 (9%)
Query: 345 IDQIGPNSFKGVYK-----GKRVGIEKLK------GCDKGNAYEFELRKDLLELMTCGHK 393
++++G ++ VYK G+ V +++++ G E L K+L H
Sbjct: 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL------HHP 79
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDH 453
NI+ V E L +V + ME L LQ +I + G+ + H
Sbjct: 80 NIVSLIDVIHSER-CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESV 513
+ +RDL Q +L++ G + L D G+ A + +E + AP+++ G +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 514 SETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI 566
+ +++S G + EM+TG+ + + I + P P++ PQ+
Sbjct: 199 TSV---DIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN-PREWPQV 247
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRI 439
+ +++ L H +I++ Y V ++ + V+ G + D I++ K+ +E R
Sbjct: 51 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE--YAGNELFDYIVQRDKMSEQEARRF 108
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR 499
+ +++ + H + +RDL + +LLD H NV + D G+ + + G +
Sbjct: 109 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL-SNIMTDGNFLKTSCGSPN 167
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMV 532
+ APE+I+G + E +V+S G++++ M+
Sbjct: 168 YAAPEVISGKLYAGPEV---DVWSCGVILYVML 197
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 9/169 (5%)
Query: 405 ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQR 464
+N L +V + GG + + + + A + ++L+ + YRDL +
Sbjct: 113 DNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 465 ILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSF 524
+L+D+ G + + D G K V T +LAPEII + + W ++
Sbjct: 173 LLIDQQGYIKVADFGF---AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW----WAL 225
Query: 525 GMVIWEMVTGEAAYAACSPVQAAVGIAACGLR--PEIPKDCPQILKSLM 571
G++I+EM G + A P+Q I + +R D +L++L+
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRI 439
+ +++ L H +I++ Y V ++ + V+ G + D I++ K+ +E R
Sbjct: 55 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE--YAGNELFDYIVQRDKMSEQEARRF 112
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR 499
+ +++ + H + +RDL + +LLD H NV + D G+ + + G +
Sbjct: 113 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL-SNIMTDGNFLKTSCGSPN 171
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMV 532
+ APE+I+G + E +V+S G++++ M+
Sbjct: 172 YAAPEVISGKLYAGPEV---DVWSCGVILYVML 201
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 26/163 (15%)
Query: 392 HKNILQFYCVCVDENHG------LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAE 445
H+N+LQF E G L ++T + GS+ D LK + E+ +A ++
Sbjct: 68 HENLLQFIAA---EKRGSNLEVELWLITAFHDKGSLTDY-LKGNIITWNELCHVAETMSR 123
Query: 446 GIKFLNDH-----------GVAYRDLNSQRILLDRHGNVCLGDMGIVTAC---KSVGEAT 491
G+ +L++ +A+RD S+ +LL L D G+ K G+ T
Sbjct: 124 GLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGD-T 182
Query: 492 EYETDGYRWLAPEIIAGDPESVSETWMS-NVYSFGMVIWEMVT 533
+ R++APE++ G + ++ ++Y+ G+V+WE+V+
Sbjct: 183 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 22/233 (9%)
Query: 345 IDQIGPNSFKGVYK-----GKRVGIEKLK------GCDKGNAYEFELRKDLLELMTCGHK 393
++++G ++ VYK G+ V +++++ G E L K+L H
Sbjct: 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL------HHP 79
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDH 453
NI+ V E L +V + ME L LQ +I + G+ + H
Sbjct: 80 NIVSLIDVIHSER-CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESV 513
+ +RDL Q +L++ G + L D G+ A + +E + AP+++ G +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 514 SETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQI 566
+ +++S G + EM+TG+ + + I + P P++ PQ+
Sbjct: 199 TSV---DIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN-PREWPQV 247
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 25/256 (9%)
Query: 332 IGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFEL--RKDLLELMT 389
+ +W S N +DQ G RV + K K + GN Y ++ ++ +++L
Sbjct: 27 LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQ 84
Query: 390 CGH----KNILQF----YCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEII 437
H K ILQ + V ++ +N L +V + + GG + + + +
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG 497
A + ++L+ + YRDL + +L+D+ G + + D G K V T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGT 201
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+LAP II + + W ++ G++I+EM G + A P+Q I + +R
Sbjct: 202 PEYLAPAIILSKGYNKAVDW----WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 557 -PEIPKDCPQILKSLM 571
D +L++L+
Sbjct: 258 PSHFSSDLKDLLRNLL 273
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 19/232 (8%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 111
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G SV + TD
Sbjct: 112 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTD 166
Query: 497 ---GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIA 551
+L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 221 RVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 270
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 19/232 (8%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 115
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G SV + TD
Sbjct: 116 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTD 170
Query: 497 ---GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIA 551
+L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 225 RVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 25/219 (11%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDLLEL 387
+N + +++IG ++ VYK G+ V ++K++ G E L K+L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--- 59
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKS--RKLQTKEIIRIAIDVAE 445
H NI++ V EN V L + + D + S + I + +
Sbjct: 60 ---NHPNIVKLLDVIHTENKLYLVFEFLHQ--DLKDFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
G+ F + H V +RDL + +L++ G + L D G+ A +E + APEI
Sbjct: 115 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
+ G + +++S G + EMVT A + S +
Sbjct: 175 LLGCKYYSTAV---DIWSLGCIFAEMVTRRALFPGDSEI 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 19/232 (8%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G SV + TD
Sbjct: 111 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTD 165
Query: 497 ---GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIA 551
+L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 220 RVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 38/250 (15%)
Query: 312 SSSFVVSVDEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKG----------KR 361
SSS++V + ++ EE ++N + IG F VYKG KR
Sbjct: 17 SSSYLVPFESYRVPLVDLEEA------TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR 70
Query: 362 VGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSV 421
E +G ++ L C H +++ C DE + + ++ K ME G++
Sbjct: 71 RTPESSQGIEEFETEIETLS-------FCRHPHLVSLIGFC-DERNEMILIYKYMENGNL 122
Query: 422 NDLI----LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGD 477
+ L + + ++ + I I A G+ +L+ + +RD+ S ILLD + + D
Sbjct: 123 KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITD 182
Query: 478 MGIVTACKSVGEATEYETDGYRWLAPEIIAG-DPESVSE---TWMSNVYSFGMVIWEMVT 533
GI + TE + + + DPE + T S+VYSFG+V++E++
Sbjct: 183 FGISK------KGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC 236
Query: 534 GEAAYAACSP 543
+A P
Sbjct: 237 ARSAIVQSLP 246
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKG--CDKGNAYEFE---LRKDLLELMTCGHKN 394
D +F D +G +F V + +KL C A E + + ++ L H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 77
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I+ + H L ++ +L+ GG + D I++ ++ R+ V + +K+L+D G
Sbjct: 78 IVALDDIYESGGH-LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 455 VAYRDLNSQRIL---LDRHGNVCLGDMG----------IVTACKSVGEATEYETDGYRWL 501
+ +RDL + +L LD + + D G + TAC + G ++
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG-----------YV 185
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
APE++A P S + + +S G++ + ++ G +
Sbjct: 186 APEVLAQKPYSKA----VDCWSIGVIAYILLCGYPPF 218
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 112
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + + G S T T
Sbjct: 113 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL 172
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 173 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 224
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 225 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 271
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 19/232 (8%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G SV + TD
Sbjct: 111 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW-----SVHAPSSRRTD 165
Query: 497 ---GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIA 551
+L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 552 ACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 220 RVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+KS+KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ C+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDFGL---CRH----TDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKG--CDKGNAYEFE---LRKDLLELMTCGHKN 394
D +F D +G +F V + +KL C A E + + ++ L H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I+ + H L ++ +L+ GG + D I++ ++ R+ V + +K+L+D G
Sbjct: 78 IVALDDIYESGGH-LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 455 VAYRDLNSQRIL---LDRHGNVCLGDMG----------IVTACKSVGEATEYETDGYRWL 501
+ +RDL + +L LD + + D G + TAC + G ++
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG-----------YV 185
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
APE++A P S + + +S G++ + ++ G
Sbjct: 186 APEVLAQKPYSKA----VDCWSIGVIAYILLCG 214
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 122/271 (45%), Gaps = 26/271 (9%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKRVGIEK----------LKGCDKGNAYEFELRKDLLE 386
+ +++L F + +G +F ++KG R + LK DK + E +
Sbjct: 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAAS 64
Query: 387 LMT-CGHKNILQFY--CVCVDENHGLCVVTKLMEGGSVNDLILKSRK-LQTKEIIRIAID 442
+M+ HK+++ Y C C DEN +V + ++ GS++ + K++ + + +A
Sbjct: 65 MMSKLSHKHLVLNYGVCFCGDEN---ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQ 121
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR--- 499
+A + FL ++ + + ++ ++ ILL R + G+ + T D +
Sbjct: 122 LAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI 181
Query: 500 -WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPE 558
W+ PE I +P++++ ++ +SFG +WE+ +G S + + + R +
Sbjct: 182 PWVPPECIE-NPKNLNLA--TDKWSFGTTLWEICSG--GDKPLSALDSQRKLQFYEDRHQ 236
Query: 559 IPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
+P L +L+ C + P RP F II
Sbjct: 237 LPAPKAAELANLINNCMDYEPDHRPSFRAII 267
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 112
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T
Sbjct: 113 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL 172
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 173 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 224
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 225 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 271
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T
Sbjct: 111 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTL 170
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 171 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 223 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKG--CDKGNAYEFE---LRKDLLELMTCGHKN 394
D +F D +G +F V + +KL C A E + + ++ L H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I+ + H L ++ +L+ GG + D I++ ++ R+ V + +K+L+D G
Sbjct: 78 IVALDDIYESGGH-LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 455 VAYRDLNSQRIL---LDRHGNVCLGDMG----------IVTACKSVGEATEYETDGYRWL 501
+ +RDL + +L LD + + D G + TAC + G ++
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG-----------YV 185
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
APE++A P S + + +S G++ + ++ G
Sbjct: 186 APEVLAQKPYSKA----VDCWSIGVIAYILLCG 214
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
GH+N+L+ +E+ V K M GGS+ I K R E + DVA + FL
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEK-MRGGSILSHIHKRRHFNELEASVVVQDVASALDFL 127
Query: 451 NDHGVAYRDLNSQRILLDRHGNVC---LGDMGIVTACKSVGEATEYETD-------GYRW 500
++ G+A+RDL + IL + V + D G+ + K G+ + T +
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 501 LAPEIIAGDPESVS-ETWMSNVYSFGMVIWEMVTGEAAYAA 540
+APE++ E S +++S G++++ +++G +
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + + G S T T
Sbjct: 114 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL 173
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 174 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSSN 603
P + + L+ + ++PS+RP E++ T N S SN
Sbjct: 226 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 372 KGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKL 431
K + + +++ L H +I++ Y V + V+ GG + D I++ +++
Sbjct: 48 KKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE--YAGGELFDYIVEKKRM 105
Query: 432 QTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEAT 491
E R + I++ + H + +RDL + +LLD + NV + D G+ + + G
Sbjct: 106 TEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGL-SNIMTDGNFL 164
Query: 492 EYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
+ + APE+I G + E +V+S G+V++ M+ G +
Sbjct: 165 KTSCGSPNYAAPEVINGKLYAGPEV---DVWSCGIVLYVMLVGRLPF 208
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 340 DNLEFIDQIGPNSFKGVYKGKRVGIEKLKG--CDKGNAYEFE---LRKDLLELMTCGHKN 394
D +F D +G +F V + +KL C A E + + ++ L H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHG 454
I+ + H L ++ +L+ GG + D I++ ++ R+ V + +K+L+D G
Sbjct: 78 IVALDDIYESGGH-LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 455 VAYRDLNSQRIL---LDRHGNVCLGDMG----------IVTACKSVGEATEYETDGYRWL 501
+ +RDL + +L LD + + D G + TAC + G ++
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG-----------YV 185
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
APE++A P S + + +S G++ + ++ G
Sbjct: 186 APEVLAQKPYSKA----VDCWSIGVIAYILLCG 214
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 13/228 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 51 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 109
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T T
Sbjct: 110 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 169
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 170 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 221
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSS 602
P + + L+ + ++PS+RP E++ T N S S
Sbjct: 222 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 267
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 438 RIAIDVAEGIKFLNDH-GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
+I + + + L ++ + +RD+ ILLDR GN+ L D GI + + V +
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGI--SGQLVDSIAKTRDA 186
Query: 497 GYR-WLAPEIIAGDPESVSETW--MSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAAC 553
G R ++APE I DP + + + S+V+S G+ ++E+ TG Y + V +
Sbjct: 187 GCRPYMAPERI--DPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK 244
Query: 554 GLRPEIPKD-----CPQILKSLMIKCWNNSPSKRPQFSEII 589
G P++ P + + + C SKRP++ E++
Sbjct: 245 GDPPQLSNSEEREFSPSFINFVNL-CLTKDESKRPKYKELL 284
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 13/228 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 114
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T T
Sbjct: 115 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 174
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 175 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 226
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSS 602
P + + L+ + ++PS+RP E++ T N S S
Sbjct: 227 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 272
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 73/174 (41%), Gaps = 6/174 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
LC V + GG + + + R + ++ +++L+ V YRD+ + ++LD
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVI 528
+ G++ + D G+ S G + +LAPE++ + + W + G+V+
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW----WGLGVVM 195
Query: 529 WEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
+EM+ G + + I +R P+ KSL+ P +R
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 73/174 (41%), Gaps = 6/174 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
LC V + GG + + + R + ++ +++L+ V YRD+ + ++LD
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVI 528
+ G++ + D G+ S G + +LAPE++ + + W + G+V+
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW----WGLGVVM 195
Query: 529 WEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
+EM+ G + + I +R P+ KSL+ P +R
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 73/174 (41%), Gaps = 6/174 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
LC V + GG + + + R + ++ +++L+ V YRD+ + ++LD
Sbjct: 85 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 144
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVI 528
+ G++ + D G+ S G + +LAPE++ + + W + G+V+
Sbjct: 145 KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW----WGLGVVM 200
Query: 529 WEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
+EM+ G + + I +R P+ KSL+ P +R
Sbjct: 201 YEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 73/174 (41%), Gaps = 6/174 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
LC V + GG + + + R + ++ +++L+ V YRD+ + ++LD
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVI 528
+ G++ + D G+ S G + +LAPE++ + + W + G+V+
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW----WGLGVVM 195
Query: 529 WEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
+EM+ G + + I +R P+ KSL+ P +R
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 108/265 (40%), Gaps = 22/265 (8%)
Query: 334 RWLLNSDNLEFIDQIGPNSFKGVYKGK---RVGIEKLKGCDKGN----AYEFELRKDLLE 386
+W L ++ E +G F VY + R I LK K E +LR+++
Sbjct: 1 QWAL--EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEI 58
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
H NIL+ Y D + ++ + G+V + K K + ++A
Sbjct: 59 QSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 117
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII 506
+ + + V +RD+ + +LL G + + D G S T T Y L PE+I
Sbjct: 118 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY--LPPEMI 175
Query: 507 AG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCP 564
G E V +++S G++ +E + G+ + A + + I+ P
Sbjct: 176 EGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF--TFPDFVT 227
Query: 565 QILKSLMIKCWNNSPSKRPQFSEII 589
+ + L+ + ++PS+RP E++
Sbjct: 228 EGARDLISRLLKHNPSQRPMLREVL 252
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 13/228 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S A T
Sbjct: 111 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 170
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 171 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSS 602
P + + L+ + ++PS+RP E++ T N S S
Sbjct: 223 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 379 ELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIR 438
+L +++ + H NI++ + V ++ L +V + GG V D ++ +++ KE
Sbjct: 60 KLFREVRIMKILNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 118
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY 498
+ +++ + + +RDL ++ +LLD N+ + D G +VG +
Sbjct: 119 KFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF-TVGNKLDTFCGSP 177
Query: 499 RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
+ APE+ G E +V+S G++++ +V+G +
Sbjct: 178 PYAAPELFQGKKYDGPEV---DVWSLGVILYTLVSGSLPF 214
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 344 FIDQIGPNSFKGVY--KGKRVG-IEKLKGCDKGNAY-EFELRKDLLELMTCGHKNILQFY 399
F++ +G +F V+ K + G + LK K A+ + L ++ L H+NI+
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRD 459
+ H +V +L+ GG + D IL+ K+ + V +K+L+++G+ +RD
Sbjct: 73 DIYESTTH-YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRD 131
Query: 460 LNSQRILL---DRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSET 516
L + +L + + + + D G+ ++ +T T GY +APE++A P S +
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGY--VAPEVLAQKPYSKA-- 187
Query: 517 WMSNVYSFGMVIWEMVTGEAAY 538
+ +S G++ + ++ G +
Sbjct: 188 --VDCWSIGVITYILLCGYPPF 207
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 73/174 (41%), Gaps = 6/174 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
LC V + GG + + + R + ++ +++L+ V YRD+ + ++LD
Sbjct: 83 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 142
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVI 528
+ G++ + D G+ S G + +LAPE++ + + W + G+V+
Sbjct: 143 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW----WGLGVVM 198
Query: 529 WEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
+EM+ G + + I +R P+ KSL+ P +R
Sbjct: 199 YEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 73/174 (41%), Gaps = 6/174 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
LC V + GG + + + R + ++ +++L+ V YRD+ + ++LD
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVI 528
+ G++ + D G+ S G + +LAPE++ + + W + G+V+
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW----WGLGVVM 195
Query: 529 WEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
+EM+ G + + I +R P+ KSL+ P +R
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H NI+ V D+ + VVT+L +GG + D IL+ + +E + + + +++L+
Sbjct: 75 HPNIITLKDV-YDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 452 DHGVAYRDLNSQRIL-LDRHGN---VCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIA 507
GV +RDL IL +D GN + + D G ++ ++APE++
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVL- 192
Query: 508 GDPESVSETWMSNVYSFGMVIWEMVTGEAAYA 539
E +++S G++++ +TG +A
Sbjct: 193 ---ERQGYDAACDIWSLGVLLYTXLTGYTPFA 221
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Query: 438 RIAIDVAEGIKFLND-HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++ + + + + +L + HGV +RD+ ILLD G + L D GI + + V + + +
Sbjct: 128 KMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGI--SGRLVDDKAKDRSA 185
Query: 497 G-YRWLAPEII-AGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
G ++APE I DP ++V+S G+ + E+ TG+ Y C +
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE 245
Query: 555 LRPEIPKDC--PQILKSLMIKCWNNSPSKRPQFSEII 589
P +P +S + C KRP++++++
Sbjct: 246 EPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL 282
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 73/174 (41%), Gaps = 6/174 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
LC V + GG + + + R + ++ +++L+ V YRD+ + ++LD
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD 139
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVI 528
+ G++ + D G+ S G + +LAPE++ + + W + G+V+
Sbjct: 140 KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW----WGLGVVM 195
Query: 529 WEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKR 582
+EM+ G + + I +R P+ KSL+ P +R
Sbjct: 196 YEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 13/228 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDSTR-VYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S A T
Sbjct: 111 ATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 170
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + I+
Sbjct: 171 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVE 222
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSS 602
P + + L+ + ++PS+RP E++ T N S S
Sbjct: 223 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 110/276 (39%), Gaps = 35/276 (12%)
Query: 339 SDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELM---TCGHKNI 395
+ + E I +G +F V K + + K E +L L E+M + H+ +
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 396 LQFYC------------VCVDENHGLCVVTKLMEGGSVNDLILKSRKL--QTKEIIRIAI 441
+++Y V + L + + E G++ DLI S L Q E R+
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI-HSENLNQQRDEYWRLFR 123
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
+ E + +++ G+ +RDL I +D NV +GD G+ + + ++
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 499 -----------RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA 547
++A E++ G + ++YS G++ +EM+ + +
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKI---DMYSLGIIFFEMIYPFSTGMERVNILKK 240
Query: 548 VGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRP 583
+ + P+ + ++ K ++ ++ P+KRP
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H++I Q Y V N + +V + GG + D I+ +L +E + + + +++
Sbjct: 67 HQHICQLYHVLETAN-KIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDG-YRWLAPEIIAGDP 510
G A+RDL + +L D + + L D G+ K + G + APE+I G
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 511 ESVSETWMSNVYSFGMVIWEMVTG 534
SE ++V+S G++++ ++ G
Sbjct: 186 YLGSE---ADVWSMGILLYVLMCG 206
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 106/232 (45%), Gaps = 13/232 (5%)
Query: 357 YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLM 416
Y K + +L +G + E E+ +++ L H NI+ + + ++ + ++ +L+
Sbjct: 40 YAAKFIKKRRLSSSRRGVSRE-EIEREVNILREIRHPNIITLHDIFENKT-DVVLILELV 97
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRI-LLDR---HGN 472
GG + D + + L E + + +G+ +L+ +A+ DL + I LLD+ +
Sbjct: 98 SGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR 157
Query: 473 VCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMV 532
+ L D GI ++ G + ++APEI+ +P + ++++S G++ + ++
Sbjct: 158 IKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGLE----ADMWSIGVITYILL 212
Query: 533 TGEAAYAACSPVQAAVGIAACG--LRPEIPKDCPQILKSLMIKCWNNSPSKR 582
+G + + + + I+A E + ++ K + + P +R
Sbjct: 213 SGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 91/215 (42%), Gaps = 13/215 (6%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T T
Sbjct: 114 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 173
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 174 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P + + L+ + ++PS+RP E++
Sbjct: 226 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 427 KSRKLQTKEIIRIAI-DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K RK T+ R + +G+++L+++ V +RDL + L+ +V +GD G+ T +
Sbjct: 134 KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 193
Query: 486 SVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQ 545
GE + ++APE++ ++ +++S G +++ ++ G+ + +
Sbjct: 194 FDGERKKXLCGTPNYIAPEVLCKK----GHSFEVDIWSLGCILYTLLVGKPPFETSCLKE 249
Query: 546 AAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
+ I +P+ + +L+ + + P+ RP +E+++
Sbjct: 250 TYIRIKKNEY--SVPRHINPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 25/162 (15%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL------KSRKLQTKEIIRIAIDVAEGIK 448
++Q +C D+ + L +V + M GG + +L+ K K T E++ +A+D +
Sbjct: 137 VVQLFCAFQDDKY-LYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVV-LALDAIHSM- 193
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA---TEYETDGYRWLAPEI 505
G+ +RD+ +LLD+HG++ L D G G T T Y ++PE+
Sbjct: 194 -----GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDY--ISPEV 246
Query: 506 I---AGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
+ GD E + +S G+ ++EM+ G+ + A S V
Sbjct: 247 LKSQGGDGYYGREC---DWWSVGVFLFEMLVGDTPFYADSLV 285
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 122/276 (44%), Gaps = 26/276 (9%)
Query: 325 VQSGGEEIGRWLLNSDNLEFIDQIGPNSF--------KGV---YKGKRVGIEKLKGCDKG 373
V G E + + D+ E +++G F KG Y K + +L +G
Sbjct: 11 VDLGTENLYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRG 70
Query: 374 NAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQT 433
+ E E+ +++ L H NI+ + + ++ + ++ +L+ GG + D + + L
Sbjct: 71 VSRE-EIEREVNILREIRHPNIITLHDIFENKT-DVVLILELVSGGELFDFLAEKESLTE 128
Query: 434 KEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRI-LLDR---HGNVCLGDMGIVTACKSVGE 489
E + + +G+ +L+ +A+ DL + I LLD+ + + L D GI ++ E
Sbjct: 129 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 188
Query: 490 ATE-YETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAV 548
+ T ++APEI+ +P + ++++S G++ + +++G + + + +
Sbjct: 189 FKNIFGTP--EFVAPEIVNYEPLGLE----ADMWSIGVITYILLSGASPFLGETKQETLT 242
Query: 549 GIAACG--LRPEIPKDCPQILKSLMIKCWNNSPSKR 582
I+A E + ++ K + + P +R
Sbjct: 243 NISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 278
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 427 KSRKLQTKEIIRIAI-DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K RK T+ R + +G+++L+++ V +RDL + L+ +V +GD G+ T +
Sbjct: 134 KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 193
Query: 486 SVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQ 545
GE + ++APE++ ++ +++S G +++ ++ G+ + +
Sbjct: 194 FDGERKKTLCGTPNYIAPEVLCKK----GHSFEVDIWSLGCILYTLLVGKPPFETSCLKE 249
Query: 546 AAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
+ I +P+ + +L+ + + P+ RP +E+++
Sbjct: 250 TYIRIKKNEY--SVPRHINPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 24/198 (12%)
Query: 343 EFIDQIGPNSFKGVYKGKR------VGIEKLKGCDKGNAYEFELRKDLLE---LMTCGHK 393
E +D +G F VYK + V I+K+K + A + R L E L H
Sbjct: 13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP 72
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILK--SRKLQTKEIIRIAIDVAEGIKFLN 451
NI+ + +V ME ++I+K S L I + +G+++L+
Sbjct: 73 NIIGL-LDAFGHKSNISLVFDFMETDL--EVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPE 511
H + +RDL +LLD +G + L D G+ + S A ++ + APE++ G
Sbjct: 130 QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFG--- 186
Query: 512 SVSETWMSNVYSFGMVIW 529
+ +Y G+ +W
Sbjct: 187 -------ARMYGVGVDMW 197
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 116/260 (44%), Gaps = 24/260 (9%)
Query: 340 DNLEFIDQIGPNSF--------KGV---YKGKRVGIEKLKGCDKGNAYEFELRKDLLELM 388
D+ E +++G F KG Y K + +L +G + E E+ +++ L
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE-EIEREVNILR 63
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIK 448
H NI+ + + ++ + ++ +L+ GG + D + + L E + + +G+
Sbjct: 64 EIRHPNIITLHDIFENKT-DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 449 FLNDHGVAYRDLNSQRI-LLDR---HGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPE 504
+L+ +A+ DL + I LLD+ + + L D GI ++ G + ++APE
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPE 181
Query: 505 IIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG--LRPEIPKD 562
I+ +P + ++++S G++ + +++G + + + + I+A E +
Sbjct: 182 IVNYEPLGLE----ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN 237
Query: 563 CPQILKSLMIKCWNNSPSKR 582
++ K + + P +R
Sbjct: 238 TSELAKDFIRRLLVKDPKRR 257
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 427 KSRKLQTKEIIRIAI-DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K RK T+ R + +G+++L+++ V +RDL + L+ +V +GD G+ T +
Sbjct: 118 KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 177
Query: 486 SVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQ 545
GE + ++APE++ ++ +++S G +++ ++ G+ + +
Sbjct: 178 FDGERKKDLCGTPNYIAPEVLCKK----GHSFEVDIWSLGCILYTLLVGKPPFETSCLKE 233
Query: 546 AAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
+ I +P+ + +L+ + + P+ RP +E+++
Sbjct: 234 TYIRIKKNEY--SVPRHINPVASALIRRMLHADPTLRPSVAELLT 276
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 19/184 (10%)
Query: 354 KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVT 413
KG Y IEK + E+ ++ L + H NI++ + V D+ + +VT
Sbjct: 76 KGRYSDDNKNIEK---------FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY-FYLVT 125
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHG-- 471
+ EGG + + I+ K + I + GI +L+ H + +RD+ + ILL+
Sbjct: 126 EFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSL 185
Query: 472 -NVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWE 530
N+ + D G+ + + + Y ++APE++ + W S G++++
Sbjct: 186 LNIKIVDFGLSSFFSKDYKLRDRLGTAY-YIAPEVLKKKYNEKCDVW-----SCGVIMYI 239
Query: 531 MVTG 534
++ G
Sbjct: 240 LLCG 243
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 13/228 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T
Sbjct: 111 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTL 170
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 171 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSS 602
P + + L+ + ++PS+RP E++ T N S S
Sbjct: 223 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 89/187 (47%), Gaps = 22/187 (11%)
Query: 409 LCVVTKLMEGGSVNDLILK--SRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRIL 466
+ ++ + GG + L L + + ++IR+ + EG+ +L+ + + + DL Q IL
Sbjct: 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNIL 163
Query: 467 LDRHGNVCLGDMGIVT--ACKSVGEATEY-ETDGY-RWLAPEIIAGDPESVSETWMSNVY 522
L LGD+ IV + +G A E E G +LAPEI+ DP + + ++++
Sbjct: 164 LS--SIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTA----TDMW 217
Query: 523 SFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR------PEIPKDCPQILKSLMIKCWN 576
+ G++ + ++T + + + + I+ + + + ++SL++K
Sbjct: 218 NIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVK--- 274
Query: 577 NSPSKRP 583
+P KRP
Sbjct: 275 -NPEKRP 280
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
GH+N+L+ +E+ V K M GGS+ I K R E + DVA + FL
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEK-MRGGSILSHIHKRRHFNELEASVVVQDVASALDFL 127
Query: 451 NDHGVAYRDLNSQRILLDRHGN------VCLGDMGIVTACKSVGEATEYETD-------G 497
++ G+A+RDL + IL + H N +C D+G + K G+ + T
Sbjct: 128 HNKGIAHRDLKPENILCE-HPNQVSPVKICDFDLG--SGIKLNGDCSPISTPELLTPCGS 184
Query: 498 YRWLAPEIIAGDPESVS-ETWMSNVYSFGMVIWEMVTGEAAYAA 540
++APE++ E S +++S G++++ +++G +
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 109 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSEL 166
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 167 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 211
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 212 GCIMAELLTGRTLFPGTDHI 231
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 427 KSRKLQTKEIIRIAI-DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK 485
K RK T+ R + +G+++L+++ V +RDL + L+ +V +GD G+ T +
Sbjct: 134 KRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 193
Query: 486 SVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQ 545
GE + ++APE++ ++ +++S G +++ ++ G+ + +
Sbjct: 194 FDGERKKDLCGTPNYIAPEVLCKK----GHSFEVDIWSLGCILYTLLVGKPPFETSCLKE 249
Query: 546 AAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
+ I +P+ + +L+ + + P+ RP +E+++
Sbjct: 250 TYIRIKKNEY--SVPRHINPVASALIRRMLHADPTLRPSVAELLT 292
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 113 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSEL 170
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 171 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 215
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 216 GCIMAELLTGRTLFPGTDHI 235
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 24/245 (9%)
Query: 354 KGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTC---GHKNILQFYCVCVDENHGLC 410
K + K V I GC G Y+ E D LE KN + C L
Sbjct: 57 KALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKC------LF 110
Query: 411 VVTKLMEGGSVNDLILKSRKLQTKEIIRIAI--DVAEGIKFLNDHGVAYRDLNSQRILLD 468
+ + + G++ I K R + +++ + + + +G+ +++ + +RDL I L
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLV 170
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVI 528
V +GD G+VT+ K+ G+ T + R+++PE I+ S ++Y+ G+++
Sbjct: 171 DTKQVKIGDFGLVTSLKNDGKRTRSKG-TLRYMSPEQIS----SQDYGKEVDLYALGLIL 225
Query: 529 WEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDC-PQILKSLMIKCWNNSPSKRPQFSE 587
E++ C LR I D + K+L+ K + P RP SE
Sbjct: 226 AELL------HVCDTAFETSKFFT-DLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSE 278
Query: 588 IISLL 592
I+ L
Sbjct: 279 ILRTL 283
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 13/228 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 110
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T
Sbjct: 111 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL 170
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 171 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 222
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSS 602
P + + L+ + ++PS+RP E++ T N S S
Sbjct: 223 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 112 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXEL 169
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 170 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 214
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 215 GCIMAELLTGRTLFPGTDHI 234
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 112 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXEL 169
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 170 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 214
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 215 GCIMAELLTGRTLFPGTDHI 234
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 57 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 116
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 117 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 174
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 175 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 219
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 220 GCIMAELLTGRTLFPGTDHI 239
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 345 IDQIGPNSFKGVYK-----GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFY 399
+++IG ++ VYK G+ ++K++ + +++ L H NI++ Y
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRD 459
V + L +V + ++ L + L++ + + GI + +D V +RD
Sbjct: 67 DV-IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 460 LNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMS 519
L Q +L++R G + + D G+ A +E + AP+++ G + +
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI--- 182
Query: 520 NVYSFGMVIWEMVTGEAAYAACS 542
+++S G + EMV G + S
Sbjct: 183 DIWSVGCIFAEMVNGAPLFPGVS 205
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 345 IDQIGPNSFKGVYK-----GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFY 399
+++IG ++ VYK G+ ++K++ + +++ L H NI++ Y
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRD 459
V + L +V + ++ L + L++ + + GI + +D V +RD
Sbjct: 67 DV-IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 460 LNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMS 519
L Q +L++R G + + D G+ A +E + AP+++ G + +
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI--- 182
Query: 520 NVYSFGMVIWEMVTGEAAYAACS 542
+++S G + EMV G + S
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVS 205
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 66 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 126 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 183
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 184 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 228
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 229 GCIMAELLTGRTLFPGTDHI 248
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 118 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXEL 175
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 176 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 220
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 221 GCIMAELLTGRTLFPGTDHI 240
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 127 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 184
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 185 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 229
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 230 GCIMAELLTGRTLFPGTDHI 249
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 53 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 113 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 170
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 171 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 215
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 216 GCIMAELLTGRTLFPGTDHI 235
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
GH NI+Q + N +V LM+ G + D + + L KE +I + E I L
Sbjct: 69 GHPNIIQLKDT-YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICAL 127
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK-SVGEATEYETDGYRWLAPEIIA-- 507
+ + +RDL + ILLD N+ L D G +C+ GE +LAPEII
Sbjct: 128 HKLNIVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEKLREVCGTPSYLAPEIIECS 185
Query: 508 ---GDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
P E +++S G++++ ++ G +
Sbjct: 186 MNDNHPGYGKEV---DMWSTGVIMYTLLAGSPPF 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 103 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 160
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 161 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 205
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 206 GCIMAELLTGRTLFPGTDHI 225
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 94/228 (41%), Gaps = 13/228 (5%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T
Sbjct: 114 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL 173
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 174 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIISLLLRTNNISNSS 602
P + + L+ + ++PS+RP E++ T N S S
Sbjct: 226 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 340 DNLEFIDQIGPNSFKGV------YKGKRVGIEKLKGCDKGNAYEF--ELRKDLLELMTCG 391
D E I+ IG ++ V G++V I+K+ NA++ ++ L EL
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIP-----NAFDVVTNAKRTLRELKILK 109
Query: 392 H---------KNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAID 442
H K+IL+ V E + VV LME ++ +I S+ L + +
Sbjct: 110 HFKHDNIIAIKDILR-PTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQ 167
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTA-CKSVGEATEYETD--GYR 499
+ G+K+++ V +RDL +L++ + + +GD G+ C S E + T+ R
Sbjct: 168 LLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 500 WL-APEIIAGDPESVSE-TWMSNVYSFGMVIWEMVT 533
W APE++ S+ E T +++S G + EM+
Sbjct: 228 WYRAPELML----SLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 345 IDQIGPNSFKGVYK-----GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFY 399
+++IG ++ VYK G+ ++K++ + +++ L H NI++ Y
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRD 459
V + L +V + ++ L + L++ + + GI + +D V +RD
Sbjct: 67 DV-IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 460 LNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMS 519
L Q +L++R G + + D G+ A +E + AP+++ G + +
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI--- 182
Query: 520 NVYSFGMVIWEMVTGEAAYAACS 542
+++S G + EMV G + S
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVS 205
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 389 TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIK 448
GH +I+ + + + +V LM G + D + + L KE I + E +
Sbjct: 156 VAGHPHIITL-IDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVS 214
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEY-ETDGYRWLAPEIIA 507
FL+ + + +RDL + ILLD + + L D G + + E T GY LAPEI+
Sbjct: 215 FLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGY--LAPEILK 272
Query: 508 GDPESVSETWMSNV--YSFGMVIWEMVTGEAAY 538
+ + V ++ G++++ ++ G +
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
GH NI+Q + N +V LM+ G + D + + L KE +I + E I L
Sbjct: 82 GHPNIIQLKDT-YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICAL 140
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK-SVGEATEYETDGYRWLAPEIIA-- 507
+ + +RDL + ILLD N+ L D G +C+ GE +LAPEII
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEKLRSVCGTPSYLAPEIIECS 198
Query: 508 ---GDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
P E +++S G++++ ++ G +
Sbjct: 199 MNDNHPGYGKEV---DMWSTGVIMYTLLAGSPPF 229
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 14/202 (6%)
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
L H NI++ Y D+ + +V ++ GG + D I+ +K + I V G
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRN-YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSG 133
Query: 447 IKFLNDHGVAYRDLNSQRILLD---RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAP 503
+L+ H + +RDL + +LL+ R + + D G+ + G+ E Y ++AP
Sbjct: 134 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY-YIAP 192
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDC 563
E++ + + W S G++++ ++ G + + Q + G P D
Sbjct: 193 EVLRKKYDEKCDVW-----SCGVILYILLCGYPPFGGQTD-QEILKRVEKGKFSFDPPDW 246
Query: 564 PQI---LKSLMIKCWNNSPSKR 582
Q+ K L+ PSKR
Sbjct: 247 TQVSDEAKQLVKLMLTYEPSKR 268
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
GH NI+Q + N +V LM+ G + D + + L KE +I + E I L
Sbjct: 82 GHPNIIQLKDT-YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICAL 140
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK-SVGEATEYETDGYRWLAPEIIA-- 507
+ + +RDL + ILLD N+ L D G +C+ GE +LAPEII
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEKLREVCGTPSYLAPEIIECS 198
Query: 508 ---GDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
P E +++S G++++ ++ G +
Sbjct: 199 MNDNHPGYGKEV---DMWSTGVIMYTLLAGSPPF 229
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 112 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 169
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 170 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 214
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 215 GCIMAELLTGRTLFPGTDHI 234
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 46 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 105
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 106 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 163
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 164 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 208
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 209 GCIMAELLTGRTLFPGTDHI 228
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 14/202 (6%)
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
L H NI++ Y D+ + +V ++ GG + D I+ +K + I V G
Sbjct: 58 LKQLDHPNIMKLYEFFEDKRN-YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSG 116
Query: 447 IKFLNDHGVAYRDLNSQRILLD---RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAP 503
+L+ H + +RDL + +LL+ R + + D G+ + G+ E Y ++AP
Sbjct: 117 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY-YIAP 175
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDC 563
E++ + + W S G++++ ++ G + + Q + G P D
Sbjct: 176 EVLRKKYDEKCDVW-----SCGVILYILLCGYPPFGGQTD-QEILKRVEKGKFSFDPPDW 229
Query: 564 PQI---LKSLMIKCWNNSPSKR 582
Q+ K L+ PSKR
Sbjct: 230 TQVSDEAKQLVKLMLTYEPSKR 251
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 109 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 166
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 167 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 211
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 212 GCIMAELLTGRTLFPGTDHI 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 59 GLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 119 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 176
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 177 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 221
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 222 GCIMAELLTGRTLFPGTDHI 241
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 114 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 172 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 216
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 217 GCIMAELLTGRTLFPGTDHI 236
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 18/217 (8%)
Query: 337 LNSDNLEFIDQIGPNSFKGV---YKGKRVGIEKLKGCDKGNAYEF-ELR---KDLLELMT 389
+N D+ E + IG SF V K + +K +K E E+R K+L +
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 390 CGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKF 449
H ++ + DE + +V L+ GG + + ++ + + + ++ + +
Sbjct: 72 LEHPFLVNLWYSFQDEE-DMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDY 130
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYE-TDGYRWLAPEIIA- 507
L + + +RD+ ILLD HG+V + D I + T T Y +APE+ +
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPY--MAPEMFSS 188
Query: 508 --GDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
G S + W +S G+ +E++ G Y S
Sbjct: 189 RKGAGYSFAVDW----WSLGVTAYELLRGRRPYHIRS 221
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 25/197 (12%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 114 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171
Query: 474 CLGDMGIVTACKSVGEATEY-ETDGYRWLAPEIIAGDPESVSETWMS-----NVYSFGMV 527
+ D G+ A + E T Y T YR APEI+ WM +++S G +
Sbjct: 172 KILDFGL--ARHTADEMTGYVATRWYR--APEIMLN--------WMHYNQTVDIWSVGCI 219
Query: 528 IWEMVTGEAAYAACSPV 544
+ E++TG + +
Sbjct: 220 MAELLTGRTLFPGTDHI 236
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 25/197 (12%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 114 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171
Query: 474 CLGDMGIVTACKSVGEATEY-ETDGYRWLAPEIIAGDPESVSETWMS-----NVYSFGMV 527
+ D G+ A + E T Y T YR APEI+ WM +++S G +
Sbjct: 172 KILDFGL--ARHTADEMTGYVATRWYR--APEIMLN--------WMHYNQTVDIWSVGCI 219
Query: 528 IWEMVTGEAAYAACSPV 544
+ E++TG + +
Sbjct: 220 MAELLTGRTLFPGTDHI 236
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 109 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 166
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 167 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 211
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 212 GCIMAELLTGRTLFPGTDHI 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 130 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 187
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 188 KILDFGL-------ARHTDDEMXGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 232
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 233 GCIMAELLTGRTLFPGTDHI 252
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 25/197 (12%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 114 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171
Query: 474 CLGDMGIVTACKSVGEATEY-ETDGYRWLAPEIIAGDPESVSETWMS-----NVYSFGMV 527
+ D G+ A + E T Y T YR APEI+ WM +++S G +
Sbjct: 172 KILDFGL--ARHTADEMTGYVATRWYR--APEIMLN--------WMHYNQTVDIWSVGCI 219
Query: 528 IWEMVTGEAAYAACSPV 544
+ E++TG + +
Sbjct: 220 MAELLTGRTLFPGTDHI 236
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 109 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 166
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 167 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 211
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 212 GCIMAELLTGRTLFPGTDHI 231
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 94/206 (45%), Gaps = 10/206 (4%)
Query: 338 NSDNLEFIDQIGPNSFKGVYKGKRVGIEK----LKGCDKGNAYEFELRKDLLELMTCGHK 393
+SD +F+ IG +F GV + R + K +K ++G A + ++++++ + H
Sbjct: 18 DSDRYDFVKDIGSGNF-GVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHP 76
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDH 453
NI++F V + H L ++ + GG + + I + + E + G+ + +
Sbjct: 77 NIVRFKEVILTPTH-LAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM 135
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY-RWLAPEIIAGDPES 512
+ +RDL + LLD L + SV + T G ++APE++
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL---RQ 192
Query: 513 VSETWMSNVYSFGMVIWEMVTGEAAY 538
+ +++V+S G+ ++ M+ G +
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPF 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 66 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 126 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 183
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 184 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 228
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 229 GCIMAELLTGRTLFPGTDHI 248
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 113 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 170
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 171 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 215
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 216 GCIMAELLTGRTLFPGTDHI 235
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 67 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 127 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 184
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 185 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 229
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 230 GCIMAELLTGRTLFPGTDHI 249
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 119 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 176
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 177 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 221
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 222 GCIMAELLTGRTLFPGTDHI 241
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 112 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 169
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 170 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 214
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 215 GCIMAELLTGRTLFPGTDHI 234
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 119 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 176
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 177 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 221
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 222 GCIMAELLTGRTLFPGTDHI 241
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 118 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 175
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 176 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 220
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 221 GCIMAELLTGRTLFPGTDHI 240
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K K +
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL G + + D G S T
Sbjct: 114 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL 173
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G+ + A + + I+
Sbjct: 174 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE 225
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P + + L+ + ++PS+RP E++
Sbjct: 226 F--TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 130 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 187
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 188 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 232
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 233 GCIMAELLTGRTLFPGTDHI 252
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 103
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 104 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 161
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 162 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 206
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 207 GCIMAELLTGRTLFPGTDHI 226
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 45 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 104
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 105 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 162
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 163 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 207
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 208 GCIMAELLTGRTLFPGTDHI 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMSNVYSFGMVIW 529
+ D G+ T+ E GY RW APEI+ ++ +++S G ++
Sbjct: 165 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN---AMHYNQTVDIWSVGCIMA 214
Query: 530 EMVTGEAAYAACSPV 544
E++TG + +
Sbjct: 215 ELLTGRTLFPGTDHI 229
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 43 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 103 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 160
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 161 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 205
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 206 GCIMAELLTGRTLFPGTDHI 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 113 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 170
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 171 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 215
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 216 GCIMAELLTGRTLFPGTDHI 235
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 103
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 104 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 161
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 162 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 206
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 207 GCIMAELLTGRTLFPGTDHI 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 31/194 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K KL + + + G+K+++ + +RDL + ++ +
Sbjct: 103 HLM-GADLNN-IVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 160
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 161 KILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 205
Query: 525 GMVIWEMVTGEAAY 538
G ++ E++TG +
Sbjct: 206 GCIMAELLTGRTLF 219
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 340 DNLEFIDQIGPNSFKGV------YKGKRVGIEKLKGCDKGNAYEF--ELRKDLLELMTCG 391
D E I+ IG ++ V G++V I+K+ NA++ ++ L EL
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIP-----NAFDVVTNAKRTLRELKILK 108
Query: 392 H---------KNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAID 442
H K+IL+ V E + VV LME ++ +I S+ L + +
Sbjct: 109 HFKHDNIIAIKDILR-PTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQ 166
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTA-CKSVGEATEYETD--GYR 499
+ G+K+++ V +RDL +L++ + + +GD G+ C S E + T+ R
Sbjct: 167 LLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 500 WL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
W APE++ E T +++S G + EM+
Sbjct: 227 WYRAPELMLSLHEY---TQAIDLWSVGCIFGEMLA 258
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 28/246 (11%)
Query: 345 IDQIGPNSFKGVYKGK-----------RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHK 393
+D++G ++ VYKGK + +E +G E L KDL H
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL------KHA 60
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDH 453
NI+ + + E L +V + ++ L + + + G+ + +
Sbjct: 61 NIVTLHDIIHTEK-SLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEAT---EYETDGYRWLAPEIIAGDP 510
V +RDL Q +L++ G + L D G+ A KS+ T E T YR P+I+ G
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARA-KSIPTKTYDNEVVTLWYR--PPDILLGST 176
Query: 511 ESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
+ ++ +++ G + +EM TG + S V+ + L + P IL +
Sbjct: 177 DYSTQI---DMWGVGCIFYEMATGRPLFPG-STVEEQLHFIFRILGTPTEETWPGILSNE 232
Query: 571 MIKCWN 576
K +N
Sbjct: 233 EFKTYN 238
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDYGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 17/220 (7%)
Query: 337 LNSDNLEFIDQIGPNSFK--GVYKGKRVG-------IEKLKGCDKGNAYEFELRKDLLEL 387
L D+ E + IG +F V K K+ G + K +G F +D+L
Sbjct: 58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVL-- 115
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAI-DVAEG 446
+ + I Q + DEN+ L +V + GG + L+ K + E+ R + ++
Sbjct: 116 VNGDRRWITQLHFAFQDENY-LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMA 174
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY-RWLAPEI 505
I ++ G +RD+ ILLDR G++ L D G ++ G G +L+PEI
Sbjct: 175 IDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 506 IAGDPESVSETWMS---NVYSFGMVIWEMVTGEAAYAACS 542
+ + ++ G+ +EM G+ + A S
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS 274
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDAGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 387 LMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
L H NI++ Y D+ + +V + +GG + D I+ K + I V G
Sbjct: 90 LKLLDHPNIMKLYDFFEDKRN-YYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSG 148
Query: 447 IKFLNDHGVAYRDLNSQRILL---DRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAP 503
+ +L+ H + +RDL + +LL ++ + + D G+ ++ + E Y ++AP
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAY-YIAP 207
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
E++ + + W S G++++ ++ G
Sbjct: 208 EVLRKKYDEKCDVW-----SIGVILFILLAG 233
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 109/276 (39%), Gaps = 35/276 (12%)
Query: 339 SDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELM---TCGHKNI 395
+ + E I +G +F V K + + K E +L L E+M + H+ +
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 396 LQFYC------------VCVDENHGLCVVTKLMEGGSVNDLILKSRKL--QTKEIIRIAI 441
+++Y V + L + + E ++ DLI S L Q E R+
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI-HSENLNQQRDEYWRLFR 123
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
+ E + +++ G+ +RDL I +D NV +GD G+ + + ++
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 499 -----------RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAA 547
++A E++ G + ++YS G++ +EM+ + +
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKI---DMYSLGIIFFEMIYPFSTGMERVNILKK 240
Query: 548 VGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRP 583
+ + P+ + ++ K ++ ++ P+KRP
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDRGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ +++ +I +L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDA-NLSQVI--QMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G+++ EM+
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGVIMGEMI 219
Query: 533 TG 534
G
Sbjct: 220 KG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ +++ +I +L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDA-NLSQVI--QMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G+++ EM+
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGVIMGEMI 219
Query: 533 TG 534
G
Sbjct: 220 KG 221
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 54 RVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 113 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIC 170
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 227
Query: 534 GEAAY 538
+
Sbjct: 228 NRPIF 232
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 21/166 (12%)
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGE------- 489
+ I I +AE ++FL+ G+ +RDL I V +GD G+VTA E
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 490 ----ATEYETDGYR-WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
AT G + +++PE I G+ S +++S G++++E++ + V
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYSHK----VDIFSLGLILFELLYSFS--TQMERV 280
Query: 545 QAAVGIAACGLRPEIPKDCPQILKSLMIK-CWNNSPSKRPQFSEII 589
+ + + PQ + +M++ + SP++RP+ ++II
Sbjct: 281 RIITDVRNLKFPLLFTQKYPQ--EHMMVQDMLSPSPTERPEATDII 324
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E G+ RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMAGFVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E G+ RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMAGFVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 92/190 (48%), Gaps = 25/190 (13%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
++V ++KL + + ++L L H+N++ V +++ + +VT
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM G +N+ I+KS+ L + + + + G+K+++ G+ +RDL + ++ +
Sbjct: 114 LM-GADLNN-IVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELR 171
Query: 475 LGDMGIVTACKSVGEATEY-ETDGYRWLAPEIIAGDPESVSETWMS-----NVYSFGMVI 528
+ D G+ A ++ E T Y T YR APEI+ WM +++S G ++
Sbjct: 172 ILDFGL--ARQADEEMTGYVATRWYR--APEIML--------NWMHYNQTVDIWSVGCIM 219
Query: 529 WEMVTGEAAY 538
E++ G+A +
Sbjct: 220 AELLQGKALF 229
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 52 RVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 110
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 111 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKIC 168
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 225
Query: 534 GEAAY 538
+
Sbjct: 226 NRPIF 230
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 357 YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLM 416
Y K + + + +G + E E+ +++ L H N++ + V + + ++ +L+
Sbjct: 40 YAAKFIKKRQSRASRRGVSRE-EIEREVSILRQVLHHNVITLHDVY-ENRTDVVLILELV 97
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRI-LLDRH---GN 472
GG + D + + L +E + +G+ +L+ +A+ DL + I LLD++ +
Sbjct: 98 SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 473 VCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWE 530
+ L D G+ + + E++ ++APEI+ +P + ++++S G++ +
Sbjct: 158 IKLIDFGL---AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE----ADMWSIGVITYI 210
Query: 531 MVTGEAAYAACSPVQAAVGIAAC 553
+++G + + + + I A
Sbjct: 211 LLSGASPFLGDTKQETLANITAV 233
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 103 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 160
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E G+ RW APEI+ WM +++S
Sbjct: 161 KILDFGL-------ARHTDDEMAGFVATRWYRAPEIMLN--------WMHYNQTVDIWSV 205
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 206 GCIMAELLTGRTLFPGTDHI 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 50 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 109 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIX 166
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 223
Query: 534 GEAAY 538
+
Sbjct: 224 NRPIF 228
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 31/203 (15%)
Query: 356 VYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLC 410
V G ++ ++KL + + ++L L H+N++ V ++E + +
Sbjct: 73 VKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVY 132
Query: 411 VVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+VT LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++
Sbjct: 133 LVTHLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 190
Query: 471 GNVCLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NV 521
+ + D G+ T+ E GY RW APEI+ WM ++
Sbjct: 191 CELKILDFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNMTVDI 235
Query: 522 YSFGMVIWEMVTGEAAYAACSPV 544
+S G ++ E++TG + +
Sbjct: 236 WSVGCIMAELLTGRTLFPGTDHI 258
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 357 YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLM 416
Y K + + + +G + E E+ +++ L H N++ + V + + ++ +L+
Sbjct: 40 YAAKFIKKRQSRASRRGVSRE-EIEREVSILRQVLHHNVITLHDVY-ENRTDVVLILELV 97
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRI-LLDRH---GN 472
GG + D + + L +E + +G+ +L+ +A+ DL + I LLD++ +
Sbjct: 98 SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 473 VCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWE 530
+ L D G+ + + E++ ++APEI+ +P + ++++S G++ +
Sbjct: 158 IKLIDFGL---AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE----ADMWSIGVITYI 210
Query: 531 MVTGEAAYAACSPVQAAVGIAAC 553
+++G + + + + I A
Sbjct: 211 LLSGASPFLGDTKQETLANITAV 233
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDGGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +VT LM
Sbjct: 70 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM 128
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
G + L LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 129 -GADLYKL-LKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIC 186
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 243
Query: 534 GEAAY 538
+
Sbjct: 244 NRPIF 248
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 357 YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLM 416
Y K + + + +G E E+ +++ L H NI+ + V + + ++ +L+
Sbjct: 40 YAAKFIKKRQSRASRRGVCRE-EIEREVSILRQVLHPNIITLHDV-YENRTDVVLILELV 97
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRI-LLDRH---GN 472
GG + D + + L +E + +G+ +L+ +A+ DL + I LLD++ +
Sbjct: 98 SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 473 VCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWE 530
+ L D G+ + + E++ ++APEI+ +P + ++++S G++ +
Sbjct: 158 IKLIDFGL---AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE----ADMWSIGVITYI 210
Query: 531 MVTGEAAYAACSPVQAAVGIAACG 554
+++G + + + + I A
Sbjct: 211 LLSGASPFLGDTKQETLANITAVS 234
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 15/242 (6%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYE---------FELRKDLLEL 387
L+ ++ E I IG +F V K E++ N +E F +D+L
Sbjct: 87 LHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN 146
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAI-DVAEG 446
C + I + DENH L +V GG + L+ K +++ R I ++
Sbjct: 147 GDC--QWITALHYAFQDENH-LYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLA 203
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY-RWLAPEI 505
I ++ +RD+ +LLD +G++ L D G G G +++PEI
Sbjct: 204 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 263
Query: 506 IAGDPESVSETWMS-NVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCP 564
+ + + + + +S G+ ++EM+ GE + A S V+ I R + P
Sbjct: 264 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVT 323
Query: 565 QI 566
+
Sbjct: 324 DV 325
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 50 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 109 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIC 166
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 223
Query: 534 GEAAY 538
+
Sbjct: 224 NRPIF 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 50 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 109 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIC 166
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 223
Query: 534 GEAAY 538
+
Sbjct: 224 NRPIF 228
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 15/242 (6%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLKGCDKGNAYE---------FELRKDLLEL 387
L+ ++ E I IG +F V K E++ N +E F +D+L
Sbjct: 71 LHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN 130
Query: 388 MTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAI-DVAEG 446
C + I + DENH L +V GG + L+ K +++ R I ++
Sbjct: 131 GDC--QWITALHYAFQDENH-LYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLA 187
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY-RWLAPEI 505
I ++ +RD+ +LLD +G++ L D G G G +++PEI
Sbjct: 188 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 247
Query: 506 IAGDPESVSETWMS-NVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCP 564
+ + + + + +S G+ ++EM+ GE + A S V+ I R + P
Sbjct: 248 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVT 307
Query: 565 QI 566
+
Sbjct: 308 DV 309
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 54 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 113 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIC 170
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 227
Query: 534 GEAAY 538
+
Sbjct: 228 NRPIF 232
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN-DHGVAYRDLNSQRILL 467
LC V + GG + + + R ++ + +L+ + V YRDL + ++L
Sbjct: 83 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 142
Query: 468 DRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMV 527
D+ G++ + D G+ G + +LAPE++ + + W + G+V
Sbjct: 143 DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW----WGLGVV 198
Query: 528 IWEMVTGEAAY 538
++EM+ G +
Sbjct: 199 MYEMMCGRLPF 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN-DHGVAYRDLNSQRILL 467
LC V + GG + + + R ++ + +L+ + V YRDL + ++L
Sbjct: 85 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 144
Query: 468 DRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMV 527
D+ G++ + D G+ G + +LAPE++ + + W + G+V
Sbjct: 145 DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW----WGLGVV 200
Query: 528 IWEMVTGEAAY 538
++EM+ G +
Sbjct: 201 MYEMMCGRLPF 211
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 52 RVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 110
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 111 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 168
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 225
Query: 534 GEAAY 538
+
Sbjct: 226 NRPIF 230
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN-DHGVAYRDLNSQRILL 467
LC V + GG + + + R ++ + +L+ + V YRDL + ++L
Sbjct: 84 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 143
Query: 468 DRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMV 527
D+ G++ + D G+ G + +LAPE++ + + W + G+V
Sbjct: 144 DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW----WGLGVV 199
Query: 528 IWEMVTGEAAY 538
++EM+ G +
Sbjct: 200 MYEMMCGRLPF 210
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D + T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILDFYL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ +++ +I +L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDA-NLSQVI--QMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EM+
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMI 219
Query: 533 TG 534
G
Sbjct: 220 KG 221
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 55 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 113
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 114 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 171
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 172 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 228
Query: 534 GEAAY 538
+
Sbjct: 229 NRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 56 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 114
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 115 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 172
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 173 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 229
Query: 534 GEAAY 538
+
Sbjct: 230 NRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 47 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 105
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 106 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 163
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 164 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 220
Query: 534 GEAAY 538
+
Sbjct: 221 NRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 54 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 113 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 170
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 227
Query: 534 GEAAY 538
+
Sbjct: 228 NRPIF 232
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 104/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 11 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ ++ + D I + LQ + V E ++
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 130
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 181
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQH 237
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 238 LIRW----CLALRPSDRPTFEEI 256
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 50 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 109 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 166
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 223
Query: 534 GEAAY 538
+
Sbjct: 224 NRPIF 228
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN-DHGVAYRDLNSQRILL 467
LC V + GG + + + R ++ + +L+ + V YRDL + ++L
Sbjct: 223 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 282
Query: 468 DRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMV 527
D+ G++ + D G+ G + +LAPE++ + + W + G+V
Sbjct: 283 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW----WGLGVV 338
Query: 528 IWEMVTGEAAY 538
++EM+ G +
Sbjct: 339 MYEMMCGRLPF 349
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN-DHGVAYRDLNSQRILL 467
LC V + GG + + + R ++ + +L+ + V YRDL + ++L
Sbjct: 226 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 285
Query: 468 DRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMV 527
D+ G++ + D G+ G + +LAPE++ + + W + G+V
Sbjct: 286 DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW----WGLGVV 341
Query: 528 IWEMVTGEAAY 538
++EM+ G +
Sbjct: 342 MYEMMCGRLPF 352
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/203 (18%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 357 YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLM 416
Y K + + + +G + E E+ +++ L H N++ + V + + ++ +L+
Sbjct: 40 YAAKFIKKRQSRASRRGVSRE-EIEREVSILRQVLHHNVITLHDVY-ENRTDVVLILELV 97
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRI-LLDRH---GN 472
GG + D + + L +E + +G+ +L+ +A+ DL + I LLD++ +
Sbjct: 98 SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 473 VCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWE 530
+ L D G+ + + E++ ++APEI+ +P + ++++S G++ +
Sbjct: 158 IKLIDFGL---AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE----ADMWSIGVITYI 210
Query: 531 MVTGEAAYAACSPVQAAVGIAAC 553
+++G + + + + I +
Sbjct: 211 LLSGASPFLGDTKQETLANITSV 233
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 110/269 (40%), Gaps = 16/269 (5%)
Query: 327 SGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKR------VGIEKL-KGCDKGNAYEFE 379
SG +I D+ E +G F VY + V ++ L K + E +
Sbjct: 10 SGTPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQ 69
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRI 439
LR+++ H NIL+ Y D + ++ + G + + KS + I
Sbjct: 70 LRREIEIQAHLHHPNILRLYNYFYDRRR-IYLILEYAPRGELYKELQKSCTFDEQRTATI 128
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYR 499
++A+ + + + V +RD+ + +LL G + + D G S+ T T Y
Sbjct: 129 MEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDY- 187
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEI 559
L PE+I G + +++ G++ +E++ G + + S + I L+
Sbjct: 188 -LPPEMIEGRMHNEK----VDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLK--F 240
Query: 560 PKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
P P + L+ K ++PS+R +++
Sbjct: 241 PASVPTGAQDLISKLLRHNPSERLPLAQV 269
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 52 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 110
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 111 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 168
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 169 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 225
Query: 534 GEAAY 538
+
Sbjct: 226 NRPIF 230
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 48 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 106
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 107 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 164
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 221
Query: 534 GEAAY 538
+
Sbjct: 222 NRPIF 226
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 48 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 106
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 107 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 164
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 221
Query: 534 GEAAY 538
+
Sbjct: 222 NRPIF 226
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 37/230 (16%)
Query: 384 LLELMTCGHKNILQFYCVCV----DENHGLCVVTKLMEGGSVNDL-ILKSRKLQTKEIIR 438
L L T H N+++ + VC D L +V + ++ L + + T+ I
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK-SVGEATEYETDG 497
+ + G+ FL+ H V +RDL Q IL+ G + L D G+ + + T
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW 184
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV-QAAVGIAACGLR 556
YR APE++ S +++S G + EM + + S V Q + GL
Sbjct: 185 YR--APEVLL----QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 238
Query: 557 PE--------IPK----------------DCPQILKSLMIKCWNNSPSKR 582
E +P+ D ++ K L++KC +P+KR
Sbjct: 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 70 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 128
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 129 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 186
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 243
Query: 534 GEAAY 538
+
Sbjct: 244 NRPIF 248
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/203 (18%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 357 YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLM 416
Y K + + + +G + E E+ +++ L H N++ + V + + ++ +L+
Sbjct: 40 YAAKFIKKRQSRASRRGVSRE-EIEREVSILRQVLHHNVITLHDVYENRT-DVVLILELV 97
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRI-LLDRH---GN 472
GG + D + + L +E + +G+ +L+ +A+ DL + I LLD++ +
Sbjct: 98 SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 473 VCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWE 530
+ L D G+ + + E++ ++APEI+ +P + ++++S G++ +
Sbjct: 158 IKLIDFGL---AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE----ADMWSIGVITYI 210
Query: 531 MVTGEAAYAACSPVQAAVGIAAC 553
+++G + + + + I +
Sbjct: 211 LLSGASPFLGDTKQETLANITSV 233
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 25/235 (10%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ N + +L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDA---NLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 219
Query: 533 TGEAAYAACSPV-QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + Q I G CP+ +K L N RP+++
Sbjct: 220 RHKILFPGRDYIDQWNKVIEQLG------TPCPEFMKKLQPTV-RNYVENRPKYA 267
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 54 RVAIRKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 113 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 170
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 227
Query: 534 GEAAY 538
+
Sbjct: 228 NRPIF 232
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 58 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 116
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 117 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 174
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 175 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 231
Query: 534 GEAAY 538
+
Sbjct: 232 NRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 50 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 109 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 166
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 223
Query: 534 GEAAY 538
+
Sbjct: 224 NRPIF 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/203 (18%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 357 YKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLM 416
Y K + + + +G + E E+ +++ L H N++ + V + + ++ +L+
Sbjct: 40 YAAKFIKKRQSRASRRGVSRE-EIEREVSILRQVLHHNVITLHDVY-ENRTDVVLILELV 97
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRI-LLDRH---GN 472
GG + D + + L +E + +G+ +L+ +A+ DL + I LLD++ +
Sbjct: 98 SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 473 VCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWE 530
+ L D G+ + + E++ ++APEI+ +P + ++++S G++ +
Sbjct: 158 IKLIDFGL---AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLE----ADMWSIGVITYI 210
Query: 531 MVTGEAAYAACSPVQAAVGIAAC 553
+++G + + + + I +
Sbjct: 211 LLSGASPFLGDTKQETLANITSV 233
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 382 KDLLELM-TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
K +E+M + H NI++ Y ++N + +V +L GG + + ++ R + + RI
Sbjct: 71 KQEIEIMKSLDHPNIIRLY-ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM 129
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILL---DRHGNVCLGDMGIVTACKSVGEATEYETDG 497
DV + + + VA+RDL + L + L D G+ K G+ +
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP-GKMMRTKVGT 188
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+++P+++ G + W S G++++ ++ G ++A + + + I
Sbjct: 189 PYYVSPQVLEGLYGPECDEW-----SAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTF 243
Query: 557 PEIPKD----CPQILKSLMIKCWNNSPSKR 582
PE KD PQ +SL+ + SP +R
Sbjct: 244 PE--KDWLNVSPQA-ESLIRRLLTKSPKQR 270
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 379 ELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEII 437
E++ ++ + H N++Q Y +N + +V + ++GG + D I+ +S L + I
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKN-DIVLVMEYVDGGELFDRIIDESYNLTELDTI 190
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRIL-LDRHG-NVCLGDMGIVTACKSVGEATEYET 495
+ EGI+ ++ + + DL + IL ++R + + D G+ K E +
Sbjct: 191 LFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP-REKLKVNF 249
Query: 496 DGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGL 555
+LAPE++ D S + ++++S G++ + +++G + + + + I AC
Sbjct: 250 GTPEFLAPEVVNYDFVS----FPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW 305
Query: 556 RPE------IPKDCPQILKSLMI--KCWNNSPS---KRPQFSE 587
E I ++ + + L+I K W S S K P S+
Sbjct: 306 DLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 127 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 184
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E G RW APEI+ WM +++S
Sbjct: 185 KILDFGL-------ARHTDDEMXGXVATRWYRAPEIMLN--------WMHYNQTVDIWSV 229
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 230 GCIMAELLTGRTLFPGTDHI 249
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 37/230 (16%)
Query: 384 LLELMTCGHKNILQFYCVCV----DENHGLCVVTKLMEGGSVNDL-ILKSRKLQTKEIIR 438
L L T H N+++ + VC D L +V + ++ L + + T+ I
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK-SVGEATEYETDG 497
+ + G+ FL+ H V +RDL Q IL+ G + L D G+ + + T
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW 184
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV-QAAVGIAACGLR 556
YR APE++ S +++S G + EM + + S V Q + GL
Sbjct: 185 YR--APEVLL----QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 238
Query: 557 PE--------IPK----------------DCPQILKSLMIKCWNNSPSKR 582
E +P+ D ++ K L++KC +P+KR
Sbjct: 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 382 KDLLELM-TCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIA 440
K +E+M + H NI++ Y ++N + +V +L GG + + ++ R + + RI
Sbjct: 54 KQEIEIMKSLDHPNIIRLY-ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM 112
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILL---DRHGNVCLGDMGIVTACKSVGEATEYETDG 497
DV + + + VA+RDL + L + L D G+ K G+ +
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP-GKMMRTKVGT 171
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR- 556
+++P+++ G + W S G++++ ++ G ++A + + + I
Sbjct: 172 PYYVSPQVLEGLYGPECDEW-----SAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTF 226
Query: 557 PEIPKD----CPQILKSLMIKCWNNSPSKR 582
PE KD PQ +SL+ + SP +R
Sbjct: 227 PE--KDWLNVSPQA-ESLIRRLLTKSPKQR 253
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 37/230 (16%)
Query: 384 LLELMTCGHKNILQFYCVCV----DENHGLCVVTKLMEGGSVNDL-ILKSRKLQTKEIIR 438
L L T H N+++ + VC D L +V + ++ L + + T+ I
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK-SVGEATEYETDG 497
+ + G+ FL+ H V +RDL Q IL+ G + L D G+ + + T
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW 184
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV-QAAVGIAACGLR 556
YR APE++ S +++S G + EM + + S V Q + GL
Sbjct: 185 YR--APEVLL----QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 238
Query: 557 PE--------IPK----------------DCPQILKSLMIKCWNNSPSKR 582
E +P+ D ++ K L++KC +P+KR
Sbjct: 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ G+ T+ E GY RW APEI+ WM +++S
Sbjct: 165 KILGFGL-------ARHTDDEMTGYVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGKRVG----IEKLKGCDKGNAYEFELRKDLLELMTCG 391
+ +SD E + IG +F GV + R + +K ++G + ++++++ +
Sbjct: 15 MHDSDRYELVKDIGAGNF-GVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H NI++F V + H L +V + GG + + I + + E + G+ + +
Sbjct: 74 HPNIVRFKEVILTPTH-LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAH 132
Query: 452 DHGVAYRDLNSQRILLD--RHGNVCLGDMGIVTACKSVGEATEYETDGY-RWLAPEIIAG 508
VA+RDL + LLD + + D G A SV + G ++APE++
Sbjct: 133 AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA--SVLHSQPKSAVGTPAYIAPEVLL- 189
Query: 509 DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSP 543
+ + +++V+S G+ ++ M+ G AY P
Sbjct: 190 --KKEYDGKVADVWSCGVTLYVMLVG--AYPFEDP 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ +++ +I +L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDA-NLSQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EM+
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMI 219
Query: 533 TG 534
G
Sbjct: 220 KG 221
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 7 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 177
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSXECQH 233
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 234 LIRW----CLALRPSDRPTFEEI 252
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 54 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 113 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 170
Query: 477 DMGIVTACKSVGEATEY--ETDGYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + E RW APEI+ S T +++S G ++ EM++
Sbjct: 171 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 227
Query: 534 GEAAY 538
+
Sbjct: 228 NRPIF 232
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 91/190 (47%), Gaps = 25/190 (13%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
++V ++KL + + ++L L H+N++ V +++ + +VT
Sbjct: 54 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 113
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM G +N+ I+K + L + + + + G+K+++ G+ +RDL + ++ +
Sbjct: 114 LM-GADLNN-IVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELR 171
Query: 475 LGDMGIVTACKSVGEATEY-ETDGYRWLAPEIIAGDPESVSETWMS-----NVYSFGMVI 528
+ D G+ A ++ E T Y T YR APEI+ WM +++S G ++
Sbjct: 172 ILDFGL--ARQADEEMTGYVATRWYR--APEIML--------NWMHYNQTVDIWSVGCIM 219
Query: 529 WEMVTGEAAY 538
E++ G+A +
Sbjct: 220 AELLQGKALF 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 55 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 113
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK++ L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 114 ETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 171
Query: 477 DMGIVTACKSVGEATEY--ETDGYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + E RW APEI+ S T +++S G ++ EM++
Sbjct: 172 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 228
Query: 534 GEAAY 538
+
Sbjct: 229 NRPIF 233
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 358 KGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVT 413
+ RV I+K+ + + LR ++ L+ H+N++ + ++ + +V
Sbjct: 67 RKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQ 125
Query: 414 KLMEGGSVNDL--ILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHG 471
LME DL +LKS++L I + G+K+++ V +RDL +L++
Sbjct: 126 DLME----TDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTC 181
Query: 472 NVCLGDMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVI 528
++ + D G+ + T + T+ RW APEI+ S T +++S G ++
Sbjct: 182 DLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN---SKGYTKSIDIWSVGCIL 238
Query: 529 WEMVTGEAAY 538
EM++ +
Sbjct: 239 AEMLSNRPIF 248
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 31/200 (15%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G RV ++KL + + ++L L H+N++ V ++E + + +VT
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
LM G +N+ I+K +KL + + + G+K+++ + +RDL + ++ +
Sbjct: 107 HLM-GADLNN-IVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMS-----NVYSF 524
+ D G+ T+ E G RW APEI+ WM +++S
Sbjct: 165 KILDFGL-------ARHTDDEMTGXVATRWYRAPEIMLN--------WMHYNQTVDIWSV 209
Query: 525 GMVIWEMVTGEAAYAACSPV 544
G ++ E++TG + +
Sbjct: 210 GCIMAELLTGRTLFPGTDHI 229
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 25/235 (10%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ N + +L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDA---NLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 219
Query: 533 TGEAAYAACSPV-QAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + Q I G CP+ +K L N RP+++
Sbjct: 220 RHKILFPGRDYIDQWNKVIEQLG------TPCPEFMKKLQPTV-RNYVENRPKYA 267
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET- 495
+ I + +AE ++FL+ G+ +RDL I V +GD G+VTA E T
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 496 -DGYR----------WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMV 532
Y +++PE I G+ S + +++S G++++E++
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGN----SYSHKVDIFSLGLILFELL 224
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 399 YCVCV-----DENHG---LCVVTKLMEGGSVNDLILK--SRKLQTKEIIRIAIDVAEGIK 448
+ VC+ + +HG L ++ + MEGG + I + + +E I D+ I+
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 449 FLNDHGVAYRDLNSQRILL---DRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
FL+ H +A+RD+ + +L ++ + L D G T T Y +APE+
Sbjct: 143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYY--VAPEV 200
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAY-----AACSP-VQAAVGIAACGLR--- 556
+ PE ++ +++S G++++ ++ G + A SP ++ + + G
Sbjct: 201 LG--PEKYDKS--CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 256
Query: 557 -PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
E+ +D Q+++ L+ P++R ++ ++
Sbjct: 257 WSEVSEDAKQLIRLLL----KTDPTERLTITQFMN 287
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/175 (18%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 382 KDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIRIA 440
K+ + +M H L ++ + + ++ + + GG + D I + K+ E+I
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM 155
Query: 441 IDVAEGIKFLNDHGVAYRDLNSQRILLD--RHGNVCLGDMGIVTACKSVGEATEYETDGY 498
EG+K +++H + + D+ + I+ + + +V + D G+ T E + T
Sbjct: 156 RQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP-DEIVKVTTATA 214
Query: 499 RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAAC 553
+ APEI+ +P + +++++ G++ + +++G + +A ++ + C
Sbjct: 215 EFAAPEIVDREPVG----FYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC 265
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 399 YCVCV-----DENHG---LCVVTKLMEGGSVNDLILK--SRKLQTKEIIRIAIDVAEGIK 448
+ VC+ + +HG L ++ + MEGG + I + + +E I D+ I+
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 449 FLNDHGVAYRDLNSQRILL---DRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEI 505
FL+ H +A+RD+ + +L ++ + L D G T T Y +APE+
Sbjct: 124 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYY--VAPEV 181
Query: 506 IAGDPESVSETWMSNVYSFGMVIWEMVTGEAAY-----AACSP-VQAAVGIAACGLR--- 556
+ PE ++ +++S G++++ ++ G + A SP ++ + + G
Sbjct: 182 LG--PEKYDKS--CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 237
Query: 557 -PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEIIS 590
E+ +D Q+++ L+ P++R ++ ++
Sbjct: 238 WSEVSEDAKQLIRLLL----KTDPTERLTITQFMN 268
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 102
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ N + +L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 103 LMDA---NLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLK 159
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 160 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 212
Query: 533 TGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 213 RHKILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQPTV-RNYVENRPKYA 260
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 411 VVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+V +LMEGG + D ++ +++L+ + +++L+++G+ +RDL + +LL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 471 GNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEII-----AGDPESVSETWMSNVYS 523
CL + K +GE + T +LAPE++ AG +V + +S
Sbjct: 151 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV------DCWS 204
Query: 524 FGMVIWEMVTGEAAYA 539
G++++ ++G ++
Sbjct: 205 LGVILFICLSGYPPFS 220
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 361 RVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV----CVDENHGLCVVTKLM 416
RV I+K+ + + LR ++ L+ H+NI+ + +++ + +V LM
Sbjct: 54 RVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 417 EGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
E +LK + L I + G+K+++ V +RDL +LL+ ++ +
Sbjct: 113 ETDLYK--LLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 170
Query: 477 DMGIVTACKSVGEATEYETD--GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
D G+ + T + T+ RW APEI+ S T +++S G ++ EM++
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEMLS 227
Query: 534 GEAAY 538
+
Sbjct: 228 NRPIF 232
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 15/182 (8%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G V ++KL + + ++L+ L HKNI+ V ++E + +V
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
+LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 109 ELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 474 CLGDMGIV-TACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ TAC + T YR APE+I G + + +++S G ++ E+V
Sbjct: 166 KILDFGLARTACTNFMMTPYVVTRYYR--APEVILGMGYAAN----VDIWSVGCIMGELV 219
Query: 533 TG 534
G
Sbjct: 220 KG 221
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 411 VVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+V +LMEGG + D ++ +++L+ + +++L+++G+ +RDL + +LL
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 275
Query: 471 GNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEII-----AGDPESVSETWMSNVYS 523
CL + K +GE + T +LAPE++ AG +V + +S
Sbjct: 276 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV------DCWS 329
Query: 524 FGMVIWEMVTGEAAYA 539
G++++ ++G ++
Sbjct: 330 LGVILFICLSGYPPFS 345
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 411 VVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+V +LMEGG + D ++ +++L+ + +++L+++G+ +RDL + +LL
Sbjct: 90 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 149
Query: 471 GNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEII-----AGDPESVSETWMSNVYS 523
CL + K +GE + T +LAPE++ AG +V + +S
Sbjct: 150 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV------DCWS 203
Query: 524 FGMVIWEMVTGEAAYA 539
G++++ ++G ++
Sbjct: 204 LGVILFICLSGYPPFS 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 411 VVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+V +LMEGG + D ++ +++L+ + +++L+++G+ +RDL + +LL
Sbjct: 97 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 156
Query: 471 GNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEII-----AGDPESVSETWMSNVYS 523
CL + K +GE + T +LAPE++ AG +V + +S
Sbjct: 157 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV------DCWS 210
Query: 524 FGMVIWEMVTGEAAYA 539
G++++ ++G ++
Sbjct: 211 LGVILFICLSGYPPFS 226
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 411 VVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+V +LMEGG + D ++ +++L+ + +++L+++G+ +RDL + +LL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 471 GNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEII-----AGDPESVSETWMSNVYS 523
CL + K +GE + T +LAPE++ AG +V + +S
Sbjct: 151 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV------DCWS 204
Query: 524 FGMVIWEMVTGEAAYA 539
G++++ ++G ++
Sbjct: 205 LGVILFICLSGYPPFS 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 411 VVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+V +LMEGG + D ++ +++L+ + +++L+++G+ +RDL + +LL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 471 GNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEII-----AGDPESVSETWMSNVYS 523
CL + K +GE + T +LAPE++ AG +V + +S
Sbjct: 151 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV------DCWS 204
Query: 524 FGMVIWEMVTGEAAYA 539
G++++ ++G ++
Sbjct: 205 LGVILFICLSGYPPFS 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 82/187 (43%), Gaps = 15/187 (8%)
Query: 409 LCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAI--DVAEGIKFLNDHGVAYRDLNSQRIL 466
L + + + G++ I K R + +++ + + + +G+ +++ + RDL I
Sbjct: 95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIF 154
Query: 467 LDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGM 526
L V +GD G+VT+ K+ G+ + R+++PE I+ ++Y+ G+
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRXRSKG-TLRYMSPEQISSQDYGKE----VDLYALGL 209
Query: 527 VIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDC-PQILKSLMIKCWNNSPSKRPQF 585
++ E++ C LR I D + K+L+ K + P RP
Sbjct: 210 ILAELL------HVCDTAFETSKFFT-DLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNT 262
Query: 586 SEIISLL 592
SEI+ L
Sbjct: 263 SEILRTL 269
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 411 VVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+V +LMEGG + D ++ +++L+ + +++L+++G+ +RDL + +LL
Sbjct: 230 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 289
Query: 471 GNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEII-----AGDPESVSETWMSNVYS 523
CL + K +GE + T +LAPE++ AG +V + +S
Sbjct: 290 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV------DCWS 343
Query: 524 FGMVIWEMVTGEAAYA 539
G++++ ++G ++
Sbjct: 344 LGVILFICLSGYPPFS 359
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 210
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + +G R + +C
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI---IG-GQVFFRQRVSSECQH 266
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 267 LIRW----CLALRPSDRPTFEEI 285
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ +++ +I +L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDA-NLSQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EM+
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMI 219
Query: 533 TG 534
G
Sbjct: 220 KG 221
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 7 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 177
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + +G R + +C
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI---IG-GQVFFRQRVSSECQH 233
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 234 LIRW----CLALRPSDRPTFEEI 252
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 20/217 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 475 LGDMGIV-TACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
+ D G+ TA S E T YR APE+I G + +++S G ++ EM+
Sbjct: 167 ILDFGLARTAGTSFMMTPEVVTRYYR--APEVILG----MGYKENVDIWSVGCIMGEMIK 220
Query: 534 GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
G + + + ++ CP+ +K L
Sbjct: 221 GGVLFPGTDHIDQWNKVIE-----QLGTPCPEFMKKL 252
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 210
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + +G R + +C
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI---IG-GQVFFRQRVSSECQH 266
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 267 LIRW----CLALRPSDRPTFEEI 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 209
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + +G R + +C
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI---IG-GQVFFRQRVSSECQH 265
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 266 LIRW----CLALRPSDRPTFEEI 284
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 11 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 130
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 181
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQH 237
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 238 LIRW----CLALRPSDRPTFEEI 256
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 102/263 (38%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 12 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 182
Query: 510 PESVSETWMSN----VYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + V+S G+++++MV G+ + + R + +C
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQH 238
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 239 LIRW----CLALRPSDRPTFEEI 257
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 209
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + +G R + +C
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI---IG-GQVFFRQRVSSECQH 265
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 266 LIRW----CLALRPSDRPTFEEI 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 210
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + +G R + +C
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI---IG-GQVFFRQRVSXECQH 266
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 267 LIRW----CLALRPSDRPTFEEI 285
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 7 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 177
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQH 233
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 234 LIRW----CLALRPSDRPTFEEI 252
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 26/191 (13%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDEN-----HGLCVVT 413
G++V I+KL + + ++LL L H+N++ V + + +V
Sbjct: 49 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
M+ + LK ++I + + +G+K+++ GV +RDL + ++ +
Sbjct: 109 PFMQTDLQKIMGLK---FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCEL 165
Query: 474 CLGDMGIVTACKSVGEATEYETDGYRWL-APEIIAGDPESVSETWMS-----NVYSFGMV 527
+ D G+ A + E T Y RW APE+I +WM +++S G +
Sbjct: 166 KILDFGL--ARHADAEMTGYVVT--RWYRAPEVIL--------SWMHYNQTVDIWSVGCI 213
Query: 528 IWEMVTGEAAY 538
+ EM+TG+ +
Sbjct: 214 MAEMLTGKTLF 224
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 12 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 182
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQH 238
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 239 LIRW----CLALRPSDRPTFEEI 257
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 12 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 182
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQH 238
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 239 LIRW----CLALRPSDRPTFEEI 257
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 40 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 210
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + +G R + +C
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI---IG-GQVFFRQRVSXECQH 266
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 267 LIRW----CLALRPSDRPTFEEI 285
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 54 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 113
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 173
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 224
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQH 280
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 281 LIRW----CLALRPSDRPTFEEI 299
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 91/190 (47%), Gaps = 25/190 (13%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
++V ++KL + + ++L L H+N++ V +++ + +VT
Sbjct: 46 QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT 105
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM G +N+ I+K + L + + + + G+K+++ G+ +RDL + ++ +
Sbjct: 106 LM-GADLNN-IVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELR 163
Query: 475 LGDMGIVTACKSVGEATEY-ETDGYRWLAPEIIAGDPESVSETWMS-----NVYSFGMVI 528
+ D G+ A ++ E T Y T YR APEI+ WM +++S G ++
Sbjct: 164 ILDFGL--ARQADEEMTGYVATRWYR--APEIMLN--------WMHYNQTVDIWSVGCIM 211
Query: 529 WEMVTGEAAY 538
E++ G+A +
Sbjct: 212 AELLQGKALF 221
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 209
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + +G R + +C
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI---IG-GQVFFRQRVSXECQH 265
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 266 LIRW----CLALRPSDRPTFEEI 284
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 19/229 (8%)
Query: 369 GCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHG-LCVVTKLMEGGSVNDLILK 427
GC + ++ +++ L H N+++ V D N L +V +L+ G V ++
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--P 129
Query: 428 SRKLQTKEIIRIAI-DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS 486
+ K +++ R D+ +GI++L+ + +RD+ +L+ G++ + D G+ K
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 487 VGEATEYETDGYRWLAPEIIAGDPESVSETW------MSNVYSFGMVIWEMVTGEAAYAA 540
+A T G P +A PES+SET +V++ G+ ++ V G+ +
Sbjct: 190 -SDALLSNTVG----TPAFMA--PESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242
Query: 541 CSPVQAAVGIAACGLR-PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
+ I + L P+ P D + LK L+ + + +P R EI
Sbjct: 243 ERIMCLHSKIKSQALEFPDQP-DIAEDLKDLITRMLDKNPESRIVVPEI 290
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 10 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 69
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 70 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 129
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 130 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 180
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 181 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQH 236
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 237 LIRW----CLALRPSDRPTFEEI 255
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 94/208 (45%), Gaps = 10/208 (4%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGKRVG----IEKLKGCDKGNAYEFELRKDLLELMTCG 391
+ +SD E + IG +F GV + R + +K ++G + ++++++ +
Sbjct: 15 MHDSDRYELVKDIGSGNF-GVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H NI++F V + H L +V + GG + + I + + E + G+ + +
Sbjct: 74 HPNIVRFKEVILTPTH-LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY-RWLAPEIIAGDP 510
V +RDL + LLD L + SV + +T G ++APE++
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLL--- 189
Query: 511 ESVSETWMSNVYSFGMVIWEMVTGEAAY 538
+ + +++V+S G+ ++ M+ G +
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ N + +L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDA---NLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 219
Query: 533 TGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 220 RHKILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQPTV-RNYVENRPKYA 267
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 39 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 209
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQH 265
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 266 LIRW----CLALRPSDRPTFEEI 284
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 26 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 85
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 145
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 196
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQH 252
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 253 LIRW----CLALRPSDRPTFEEI 271
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 34 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 93
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 94 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 153
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 154 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 204
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 205 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSXECQH 260
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 261 LIRW----CLALRPSDRPTFEEI 279
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 26 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 85
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 145
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 196
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSXECQH 252
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 253 LIRW----CLALRPSDRPTFEEI 271
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 27 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 197
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQH 253
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 254 LIRW----CLALRPSDRPTFEEI 272
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 27 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 197
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSXECQH 253
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 254 LIRW----CLALRPSDRPTFEEI 272
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 46 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 105
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 165
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 166 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 216
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 217 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSSECQH 272
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 273 LIRW----CLALRPSDRPTFEEI 291
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 54 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 113
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 173
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 224
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSXECQH 280
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 281 LIRW----CLALRPSDRPTFEEI 299
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 219
Query: 533 TGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 220 RHKILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQPTV-RNYVENRPKYA 267
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 59 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 118
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 119 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 178
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 179 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 229
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 230 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSXECQH 285
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C PS RP F EI
Sbjct: 286 LIRW----CLALRPSDRPTFEEI 304
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 92/218 (42%), Gaps = 22/218 (10%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EM+
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMI 219
Query: 533 TGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
G + + + ++ CP+ +K L
Sbjct: 220 KGGVLFPGTDHIDQWNKVIE-----QLGTPCPEFMKKL 252
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 111 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
+ D G+ + T Y Y + APE+I G + +++S G ++ EM+ G
Sbjct: 168 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILG----MGYKENVDIWSVGCIMGEMIKG 222
Query: 535 EAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
+ + + ++ CP+ +K L
Sbjct: 223 GVLFPGTDHIDQWNKVIE-----QLGTPCPEFMKKL 253
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G V ++KL + + ++L+ L HKNI+ V ++E + +V
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
+LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 107 ELMDANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 163
Query: 474 CLGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEM 531
+ D G+ + T Y Y + APE+I G E+V +++S G ++ E+
Sbjct: 164 KILDFGLARTASTNFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEL 216
Query: 532 VTGEAAY 538
V G +
Sbjct: 217 VKGSVIF 223
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%), Gaps = 10/208 (4%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGKRVG----IEKLKGCDKGNAYEFELRKDLLELMTCG 391
+ +SD E + IG +F GV + R + +K ++G + ++++++ +
Sbjct: 15 MHDSDRYELVKDIGSGNF-GVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 73
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H NI++F V + H L +V + GG + + I + + E + G+ + +
Sbjct: 74 HPNIVRFKEVILTPTH-LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY-RWLAPEIIAGDP 510
V +RDL + LLD L + SV + T G ++APE++
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLL--- 189
Query: 511 ESVSETWMSNVYSFGMVIWEMVTGEAAY 538
+ + +++V+S G+ ++ M+ G +
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDEN-----HGLCVVT 413
G++V I+KL + + ++LL L H+N++ V + + +V
Sbjct: 67 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126
Query: 414 KLMEGGSVNDL-ILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGN 472
M+ DL + + ++I + + +G+K+++ GV +RDL + ++
Sbjct: 127 PFMQ----TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE 182
Query: 473 VCLGDMGIVTACKSVGEATEYETDGYRWL-APEIIAGDPESVSETWMS-----NVYSFGM 526
+ + D G+ A + E T Y RW APE+I +WM +++S G
Sbjct: 183 LKILDFGL--ARHADAEMTGYVVT--RWYRAPEVIL--------SWMHYNQTVDIWSVGC 230
Query: 527 VIWEMVTGEAAY 538
++ EM+TG+ +
Sbjct: 231 IMAEMLTGKTLF 242
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ +++ +I +L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDA-NLSQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EM+
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMI 219
Query: 533 TG 534
G
Sbjct: 220 KG 221
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K + +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSRFDEQRT 114
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL +G + + D G S T T
Sbjct: 115 ATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTL 174
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G + A + + I+
Sbjct: 175 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVE 226
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P + + L+ + ++ S+R +E++
Sbjct: 227 F--TFPDFVTEGARDLISRLLKHNASQRLTLAEVL 259
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 392 HKNILQFYCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGI 447
H NIL + V H L +VT+LM + + + + I + G+
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 448 KFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWL-APEII 506
L++ GV +RDL+ ILL + ++ + D + + T Y T +RW APE++
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT--HRWYRAPELV 205
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
+ T + +++S G V+ EM +A +
Sbjct: 206 M---QFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 392 HKNILQFYCVCVD----ENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGI 447
H NIL + V H L +VT+LM + + + + I + G+
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 448 KFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWL-APEII 506
L++ GV +RDL+ ILL + ++ + D + + T Y T +RW APE++
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT--HRWYRAPELV 205
Query: 507 AGDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
+ T + +++S G V+ EM +A +
Sbjct: 206 M---QFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 81/182 (44%), Gaps = 17/182 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EM+
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMI 219
Query: 533 TG 534
G
Sbjct: 220 KG 221
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%), Gaps = 10/208 (4%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGKRVG----IEKLKGCDKGNAYEFELRKDLLELMTCG 391
+ +SD E + IG +F GV + R + +K ++G + ++++++ +
Sbjct: 14 MHDSDRYELVKDIGSGNF-GVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR 72
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H NI++F V + H L +V + GG + + I + + E + G+ + +
Sbjct: 73 HPNIVRFKEVILTPTH-LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 131
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY-RWLAPEIIAGDP 510
V +RDL + LLD L + SV + T G ++APE++
Sbjct: 132 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL--- 188
Query: 511 ESVSETWMSNVYSFGMVIWEMVTGEAAY 538
+ + +++V+S G+ ++ M+ G +
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPF 216
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 10/211 (4%)
Query: 340 DNLEFIDQIGPNSFKGVYK------GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHK 393
+ E I +IG S+ V+K G+ V I+K + + +++ L H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 394 NILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDH 453
N++ V L +V + + +++L R + + I + + F + H
Sbjct: 63 NLVNLLEV-FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121
Query: 454 GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESV 513
+RD+ + IL+ +H + L D G + + E + +PE++ GD +
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Query: 514 SETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
+V++ G V E+++G + S V
Sbjct: 182 PPV---DVWAIGCVFAELLSGVPLWPGKSDV 209
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 49 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 108
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 109 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 165
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 166 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 218
Query: 533 TGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 219 RHKILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQPTV-RNYVENRPKYA 266
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 103
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 104 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 160
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 161 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 213
Query: 533 TGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 214 RHKILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQPTV-RNYVENRPKYA 261
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 219
Query: 533 TGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 220 RHKILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQPTV-RNYVENRPKYA 267
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 219
Query: 533 TGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 220 RHKILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQPTV-RNYVENRPKYA 267
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 43 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 102
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 103 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 159
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 160 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 212
Query: 533 TGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 213 RHKILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQPTV-RNYVENRPKYA 260
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Query: 336 LLNSDNLEFIDQIGPNSFKGVYKGKRVG----IEKLKGCDKGNAYEFELRKDLLELMTCG 391
+ +SD E + IG +F GV + R + +K ++G ++++++ +
Sbjct: 15 MHDSDRYELVKDIGSGNF-GVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLR 73
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H NI++F V + H L +V + GG + + I + + E + G+ + +
Sbjct: 74 HPNIVRFKEVILTPTH-LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY-RWLAPEIIAGDP 510
V +RDL + LLD L + SV + T G ++APE++
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL--- 189
Query: 511 ESVSETWMSNVYSFGMVIWEMVTGEAAY 538
+ + +++V+S G+ ++ M+ G +
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 102/263 (38%), Gaps = 38/263 (14%)
Query: 347 QIGP----NSFKGVYKGKRVG---------IEKLKGCDKG---NAYEFELRKDLLELMTC 390
Q+GP F VY G RV +EK + D G N + LL+ ++
Sbjct: 27 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 391 GHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFL 450
G +++ + + ++ + + D I + LQ + V E ++
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 451 NDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGD 509
++ GV +RD+ + IL+D G + L D G K + + DG R +P
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFDGTRVYSP------ 197
Query: 510 PESVSETWM----SNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQ 565
PE + + V+S G+++++MV G+ + + R + +C
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH----DEEIIRGQVFFRQRVSXECQH 253
Query: 566 ILKSLMIKCWNNSPSKRPQFSEI 588
+++ C P RP F EI
Sbjct: 254 LIRW----CLALRPXDRPTFEEI 272
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 110
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 111 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 168 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 220
Query: 533 TGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 221 RHKILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQPTV-RNYVENRPKYA 268
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 51 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 110
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 111 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 168 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 220
Query: 533 TGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 221 RHKILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQPTV-RNYVENRPKYA 268
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 103
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 104 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 160
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 161 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DIWSVGCIMGEMV 213
Query: 533 TGEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 214 RHKILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQPTV-RNYVENRPKYA 261
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 19/232 (8%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 148 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
+ D G+ + T Y Y + APE+I G + +++S G ++ EMV
Sbjct: 205 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILG----MGYKENVDIWSVGCIMGEMVRH 259
Query: 535 EAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 260 KILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQ-PTVRNYVENRPKYA 305
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 19/232 (8%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 88 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 147
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 148 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
+ D G+ + T Y Y + APE+I G + +++S G ++ EMV
Sbjct: 205 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILG----MGYKENVDIWSVGCIMGEMVRH 259
Query: 535 EAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP+ +K L N RP+++
Sbjct: 260 KILFPGRDYIDQWNKVIE-----QLGTPCPEFMKKLQPTV-RNYVENRPKYA 305
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G+V + K + +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHDATR-VYLILEYAPLGTVYRELQKLSRFDEQRT 114
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A + + + V +RD+ + +LL +G + + D G S T T
Sbjct: 115 ATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTL 174
Query: 497 GYRWLAPEIIAG--DPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACG 554
Y L PE+I G E V +++S G++ +E + G + A + + I+
Sbjct: 175 DY--LPPEMIEGRMHDEKV------DLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVE 226
Query: 555 LRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
P + + L+ + ++ S+R +E++
Sbjct: 227 F--TFPDFVTEGARDLISRLLKHNASQRLTLAEVL 259
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL------KSRKLQTKEIIRIAIDVAEGIK 448
++Q + D+ + L +V + M GG + +L+ K + T E++ +A+D +
Sbjct: 136 VVQLFYAFQDDRY-LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV-LALDAIHSMG 193
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA---TEYETDGYRWLAPEI 505
F+ +RD+ +LLD+ G++ L D G G T T Y ++PE+
Sbjct: 194 FI------HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY--ISPEV 245
Query: 506 I---AGDPESVSE-TWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
+ GD E W +S G+ ++EM+ G+ + A S V
Sbjct: 246 LKSQGGDGYYGRECDW----WSVGVFLYEMLVGDTPFYADSLV 284
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL------KSRKLQTKEIIRIAIDVAEGIK 448
++Q + D+ + L +V + M GG + +L+ K + T E++ +A+D +
Sbjct: 131 VVQLFYAFQDDRY-LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV-LALDAIHSMG 188
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA---TEYETDGYRWLAPEI 505
F+ +RD+ +LLD+ G++ L D G G T T Y ++PE+
Sbjct: 189 FI------HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY--ISPEV 240
Query: 506 I---AGDPESVSE-TWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
+ GD E W +S G+ ++EM+ G+ + A S V
Sbjct: 241 LKSQGGDGYYGRECDW----WSVGVFLYEMLVGDTPFYADSLV 279
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY + N + + GG + D I + + R + G+ +L+
Sbjct: 63 HENVVKFYGHRREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 182 -EFHAEP--VDVWSCGIVLTAMLAGELPW 207
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 91/217 (41%), Gaps = 20/217 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 52 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 111
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 112 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 168
Query: 475 LGDMGIV-TACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
+ D G+ TA S T YR APE+I G + +++S G ++ EM+
Sbjct: 169 ILDFGLARTAGTSFMMVPFVVTRYYR--APEVILG----MGYKENVDIWSVGCIMGEMIK 222
Query: 534 GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSL 570
G + + + ++ CP+ +K L
Sbjct: 223 GGVLFPGTDHIDQWNKVIE-----QLGTPCPEFMKKL 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY + N + + GG + D I + + R + G+ +L+
Sbjct: 64 HENVVKFYGHRREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 183 -EFHAEP--VDVWSCGIVLTAMLAGELPW 208
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 27/163 (16%)
Query: 395 ILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL------KSRKLQTKEIIRIAIDVAEGIK 448
++Q + D+ + L +V + M GG + +L+ K + T E++ +A+D +
Sbjct: 136 VVQLFYAFQDDRY-LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV-LALDAIHSMG 193
Query: 449 FLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEA---TEYETDGYRWLAPEI 505
F+ +RD+ +LLD+ G++ L D G G T T Y ++PE+
Sbjct: 194 FI------HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY--ISPEV 245
Query: 506 I---AGDPESVSE-TWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
+ GD E W +S G+ ++EM+ G+ + A S V
Sbjct: 246 LKSQGGDGYYGRECDW----WSVGVFLYEMLVGDTPFYADSLV 284
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRI 439
++K++ H+N+++FY E + + + GG + D I + + R
Sbjct: 51 IKKEIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF 109
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG- 497
+ G+ +L+ G+ +RD+ + +LLD N+ + D G+ T + E + G
Sbjct: 110 FHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
++APE++ E +E +V+S G+V+ M+ GE + S
Sbjct: 170 LPYVAPELLKRR-EFHAEP--VDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRI 439
++K++ H+N+++FY E + + + GG + D I + + R
Sbjct: 52 IKKEIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF 110
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG- 497
+ G+ +L+ G+ +RD+ + +LLD N+ + D G+ T + E + G
Sbjct: 111 FHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
++APE++ E +E +V+S G+V+ M+ GE + S
Sbjct: 171 LPYVAPELLKRR-EFHAEP--VDVWSCGIVLTAMLAGELPWDQPS 212
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 63 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG-YRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + E + G ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
E +E +V+S G+V+ M+ GE + S
Sbjct: 182 -EFHAEP--VDVWSCGIVLTAMLAGELPWDQPS 211
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 47/293 (16%)
Query: 343 EFIDQIGPNSFKGVYK------GKRVGIEKL-KGCDKGNAYEFELRKDLLELMTCGHKNI 395
E + ++G ++ V+K G+ V ++K+ + R+ ++ GH+NI
Sbjct: 12 ELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENI 71
Query: 396 LQFYCVC-VDENHGLCVVTKLMEGGSVNDL--ILKSRKLQTKEIIRIAIDVAEGIKFLND 452
+ V D + + +V ME DL ++++ L+ + + + IK+L+
Sbjct: 72 VNLLNVLRADNDRDVYLVFDYME----TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHS 127
Query: 453 HGVAYRDLNSQRILLDRHGNVCLGDMGIVTACK-----------SVGEATEYETD----- 496
G+ +RD+ ILL+ +V + D G+ + S+ E TE D
Sbjct: 128 GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 497 ----GYRWL-APEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIA 551
RW APEI+ G S T +++S G ++ E++ G+ + S + I
Sbjct: 188 TDYVATRWYRAPEILLG---STKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244
Query: 552 ACGLRPEIPKDCPQI--------LKSLMIKCWNNSPSKRPQFSEIISLLLRTN 596
P +D I ++SL K +KR F++ +LLL+ N
Sbjct: 245 GVIDFPS-NEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKIN 296
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 63 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG-YRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + E + G ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 182 -EFHAEP--VDVWSCGIVLTAMLAGELPW 207
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVT 413
G +V I+KL + + ++L L H+N++ V +D+ +V
Sbjct: 50 GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109
Query: 414 KLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNV 473
M G+ ++K KL I + + +G+++++ G+ +RDL + ++ +
Sbjct: 110 PFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCEL 167
Query: 474 CLGDMGIVTACKSVGEATEYETDGY---RWL-APEIIAGDPESVSETWMSNVYSFGMVIW 529
+ D G+ S E G RW APE+I + T +++S G ++
Sbjct: 168 KILDFGLARQADS-------EMXGXVVTRWYRAPEVILN---WMRYTQTVDIWSVGCIMA 217
Query: 530 EMVTGEAAY 538
EM+TG+ +
Sbjct: 218 EMITGKTLF 226
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/177 (17%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIR 438
+RK++ + H ++ + D+N + ++ + M GG + + + + K+ E +
Sbjct: 95 VRKEIQTMSVLRHPTLVNLHDAFEDDNE-MVMIYEFMSGGELFEKVADEHNKMSEDEAVE 153
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILL--DRHGNVCLGDMGIVTACKSVGEATEYETD 496
V +G+ ++++ + DL + I+ R + L D G+ TA ++ + T
Sbjct: 154 YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL-TAHLDPKQSVKVTTG 212
Query: 497 GYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAAC 553
+ APE+ G P + ++++S G++ + +++G + + + + + +C
Sbjct: 213 TAEFAAPEVAEGKPVG----YYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC 265
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 90/216 (41%), Gaps = 39/216 (18%)
Query: 343 EFIDQIGPNSFKGVYKGKR------VGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNIL 396
E +++IG ++ V+K K V +++++ D +++ L HKNI+
Sbjct: 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 397 QFYCVCVDENHGLCVVTKLME----------GGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
+ + V + + L +V + + G ++ I+KS Q + +G
Sbjct: 65 RLHDV-LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQ----------LLKG 113
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII 506
+ F + V +RDL Q +L++R+G + L D G+ A E + P+++
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
Query: 507 AGDPESVSETWMSNVYSFGMVIWEM--VTGEAAYAA 540
G + +YS + +W + E A AA
Sbjct: 174 FG----------AKLYSTSIDMWSAGCIFAELANAA 199
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 16/259 (6%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVG---IEKLKGCDKGN----AYEFELRKD 383
E+ + D+ + + +G F VY + I LK K E +LR++
Sbjct: 5 EMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRRE 64
Query: 384 LLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDV 443
+ H NIL+ Y D + ++ + G + + K + + ++
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKR-IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 444 AEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAP 503
A+ + + ++ V +RD+ + +L+ G + + D G S+ T Y L P
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDY--LPP 181
Query: 504 EIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPKDC 563
E+I G + +++ G++ +E + G + + S + I L+ P
Sbjct: 182 EMIEGK----THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK--FPPFL 235
Query: 564 PQILKSLMIKCWNNSPSKR 582
K L+ K P +R
Sbjct: 236 SDGSKDLISKLLRYHPPQR 254
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 64 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 183 -EFHAEP--VDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 64 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 183 -EFHAEP--VDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 64 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 183 -EFHAEP--VDVWSCGIVLTAMLAGELPW 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 63 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVG-EATEYETDG-YRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + E + G ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 182 -EFHAEP--VDVWSCGIVLTAMLAGELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 62 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 181 -EFHAEP--VDVWSCGIVLTAMLAGELPW 206
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/177 (17%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLIL-KSRKLQTKEIIR 438
+RK++ + H ++ + D+N + ++ + M GG + + + + K+ E +
Sbjct: 201 VRKEIQTMSVLRHPTLVNLHDAFEDDNE-MVMIYEFMSGGELFEKVADEHNKMSEDEAVE 259
Query: 439 IAIDVAEGIKFLNDHGVAYRDLNSQRILL--DRHGNVCLGDMGIVTACKSVGEATEYETD 496
V +G+ ++++ + DL + I+ R + L D G+ TA ++ + T
Sbjct: 260 YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL-TAHLDPKQSVKVTTG 318
Query: 497 GYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAAC 553
+ APE+ G P + ++++S G++ + +++G + + + + + +C
Sbjct: 319 TAEFAAPEVAEGKPVG----YYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC 371
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 21/233 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 475 LGDMGIV-TACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVT 533
+ D G+ TA S E T YR APE+I G + +++S G ++ EMV
Sbjct: 167 ILDFGLARTAGTSFMMEPEVVTRYYR--APEVILG----MGYKENVDIWSVGCIMGEMVC 220
Query: 534 GEAAYAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFS 586
+ + + + ++ CP +K L N RP+++
Sbjct: 221 HKILFPGRDYIDQWNKVIE-----QLGTPCPAFMKKLQPTV-RNYVENRPKYA 267
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 110/281 (39%), Gaps = 51/281 (18%)
Query: 309 PLPSSSFVVSVDEWQTVQSGGEEIGRWLLNSDNLEFIDQIGPNSFKGVYKGKRVGIEKLK 368
PL ++ EW + ++ + L+ ++ E + IG +F V + KLK
Sbjct: 45 PLRREKNILEYLEW--AKPFTSKVKQMRLHREDFEILKVIGRGAFG------EVAVVKLK 96
Query: 369 GCDKGNAYEFELRKDLLE-------------LMTCGHKNILQFYCVCVDENHGLCVVTKL 415
DK A + + ++L+ L+ K I + D+N+ L +V
Sbjct: 97 NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNN-LYLVMDY 155
Query: 416 MEGGSVNDLILKSRKLQTKEIIR-------IAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
GG + L+ K +E+ R IAID + ++ +RD+ IL+D
Sbjct: 156 YVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYV------HRDIKPDNILMD 209
Query: 469 RHGNVCLGDMGIVTACKSVGEATEYETDGY-RWLAPEIIAG--------DPESVSETWMS 519
+G++ L D G G G +++PEI+ PE W
Sbjct: 210 MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPEC---DW-- 264
Query: 520 NVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIP 560
+S G+ ++EM+ GE + A S V+ I R + P
Sbjct: 265 --WSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP 303
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 24/153 (15%)
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLD-RHGNVCLGDMGIVTACKSVGEATEYETDGYRWL 501
V I+ + GV +RD+ + IL+D R G L D G + + + + DG R
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG---SGALLHDEPYTDFDGTRVY 204
Query: 502 APEIIAGDPESVS----ETWMSNVYSFGMVIWEMVTGEAAYAACSPV-QAAVGIAACGLR 556
+P PE +S + V+S G+++++MV G+ + + +A + A
Sbjct: 205 SP------PEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPA---- 254
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKRPQFSEII 589
+ DC +L+ +C PS RP EI+
Sbjct: 255 -HVSPDC----CALIRRCLAPKPSSRPSLEEIL 282
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 63 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 182 -EFHAEP--VDVWSCGIVLTAMLAGELPW 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Query: 380 LRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRI 439
++K++ H+N+++FY E + + + GG + D I + + R
Sbjct: 51 IKKEIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF 109
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DG 497
+ G+ +L+ G+ +RD+ + +LLD N+ + D G+ T +
Sbjct: 110 FHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 498 YRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAY 538
++APE++ E +E +V+S G+V+ M+ GE +
Sbjct: 170 LPYVAPELLKRR-EFHAEP--VDVWSCGIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 64 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 183 -EFHAEP--VDVWSCGIVLTAMLAGELPW 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 63 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 182 -EFHAEP--VDVWSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 63 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 182 -EFHAEP--VDVWSCGIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 63 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 182 -EFHAEP--VDVWSCGIVLTAMLAGELPW 207
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 64 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 183 -EFHAEP--VDVWSCGIVLTAMLAGELPW 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 63 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 182 -EFHAEP--VDVWSCGIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 63 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 182 -EFHAEP--VDVWSCGIVLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 392 HKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLN 451
H+N+++FY E + + + GG + D I + + R + G+ +L+
Sbjct: 64 HENVVKFYG-HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 452 DHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYET--DGYRWLAPEIIAGD 509
G+ +RD+ + +LLD N+ + D G+ T + ++APE++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAY 538
E +E +V+S G+V+ M+ GE +
Sbjct: 183 -EFHAEP--VDVWSCGIVLTAMLAGELPW 208
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 50 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 110 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 475 LGDMGIV-TACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEM 531
+ D G+ TA S E T YR APE+I G E+V +++S G ++ EM
Sbjct: 167 ILDFGLARTAGTSFMMEPEVVTRYYR--APEVILGMGYKENV------DLWSVGCIMGEM 218
Query: 532 V 532
V
Sbjct: 219 V 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 13/178 (7%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 55 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 114
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 115 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 171
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G + +++S G ++ EMV
Sbjct: 172 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILG----MGYKENVDLWSVGCIMGEMV 224
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 22/171 (12%)
Query: 423 DLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD-RHGNVCLGDMGIV 481
D I + LQ + V E ++ ++ GV +RD+ + IL+D G + L D G
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 205
Query: 482 TACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWM----SNVYSFGMVIWEMVTGEAA 537
K + + DG R +P PE + + V+S G+++++MV G+
Sbjct: 206 ALLK---DTVYTDFDGTRVYSP------PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
Query: 538 YAACSPVQAAVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
+ + R + +C +++ C PS RP F EI
Sbjct: 257 FEH----DEEIIRGQVFFRQRVSSECQHLIRW----CLALRPSDRPTFEEI 299
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 351 NSFKGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCVCVDENHGLC 410
S K Y K V K+KG D + ++K++ L H+NIL + + L
Sbjct: 27 TSSKKTYMAKFV---KVKGTD-----QVLVKKEISILNIARHRNILHLHE-SFESMEELV 77
Query: 411 VVTKLMEGGSVNDLILKSR-KLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD- 468
++ + + G + + I S +L +EI+ V E ++FL+ H + + D+ + I+
Sbjct: 78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT 137
Query: 469 -RHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMV 527
R + + + G K G+ + APE+ D S + ++++S G +
Sbjct: 138 RRSSTIKIIEFGQARQLKP-GDNFRLLFTAPEYYAPEVHQHDVVSTA----TDMWSLGTL 192
Query: 528 IWEMVTG 534
++ +++G
Sbjct: 193 VYVLLSG 199
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 9/206 (4%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G + + K + +
Sbjct: 59 EHQLRREIEIQSHLRHPNILRMYNYFHDRKR-IYLMLEFAPRGELYKELQKHGRFDEQRS 117
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A+ + + ++ V +RD+ + +L+ G + + D G S+ T
Sbjct: 118 ATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTL 177
Query: 497 GYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR 556
Y L PE+I G + +++ G++ +E + G + + S + I L+
Sbjct: 178 DY--LPPEMIEGK----THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 231
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKR 582
P K L+ K P +R
Sbjct: 232 --FPPFLSDGSKDLISKLLRYHPPQR 255
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 9/206 (4%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEI 436
E +LR+++ H NIL+ Y D + ++ + G + + K + +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKR-IYLMLEFAPRGELYKELQKHGRFDEQRS 116
Query: 437 IRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
++A+ + + ++ V +RD+ + +L+ G + + D G S+ T
Sbjct: 117 ATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTL 176
Query: 497 GYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLR 556
Y L PE+I G + +++ G++ +E + G + + S + I L+
Sbjct: 177 DY--LPPEMIEGK----THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 230
Query: 557 PEIPKDCPQILKSLMIKCWNNSPSKR 582
P K L+ K P +R
Sbjct: 231 --FPPFLSDGSKDLISKLLRYHPPQR 254
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 360 KRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNILQFYCV-----CVDENHGLCVVTK 414
+ V I+KL + + ++L+ + HKNI+ V ++E + +V +
Sbjct: 44 RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 103
Query: 415 LMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC 474
LM+ + ++ L + + + + GIK L+ G+ +RDL I++ +
Sbjct: 104 LMDANLCQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 160
Query: 475 LGDMGIVTACKSVGEATEYETDGYRWLAPEII--AGDPESVSETWMSNVYSFGMVIWEMV 532
+ D G+ + T Y Y + APE+I G E+V +++S G ++ EMV
Sbjct: 161 ILDFGLARTAGTSFMMTPYVVTRY-YRAPEVILGMGYKENV------DLWSVGCIMGEMV 213
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANSFVGT 197
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S S++++ G +I+++V G + A
Sbjct: 198 AQYVSPELLTEKSASKS----SDLWALGCIIYQLVAGLPPFRA 236
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 27/197 (13%)
Query: 347 QIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLE------LMTCG---HKNILQ 397
++G SF V++ K DK ++ ++K LE L+ C I+
Sbjct: 65 RVGRGSFGEVHRMK----------DKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVP 114
Query: 398 FYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAY 457
Y V E + + +L+EGGS+ LI + L + EG+++L+ + +
Sbjct: 115 LYGA-VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 458 RDLNSQRILLDRHGN-VCLGDMGIVTACKSVGEATEYETDGY-----RWLAPEIIAGDP- 510
D+ + +LL G+ L D G + G T Y +APE++ G P
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 233
Query: 511 ESVSETWMSNVYSFGMV 527
++ + W S M+
Sbjct: 234 DAKVDIWSSCCMMLHML 250
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 27/197 (13%)
Query: 347 QIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLE------LMTCG---HKNILQ 397
++G SF V++ K DK ++ ++K LE L+ C I+
Sbjct: 81 RVGRGSFGEVHRMK----------DKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVP 130
Query: 398 FYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAY 457
Y V E + + +L+EGGS+ LI + L + EG+++L+ + +
Sbjct: 131 LYGA-VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 189
Query: 458 RDLNSQRILLDRHGN-VCLGDMGIVTACKSVGEATEYETDGY-----RWLAPEIIAGDP- 510
D+ + +LL G+ L D G + G T Y +APE++ G P
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 249
Query: 511 ESVSETWMSNVYSFGMV 527
++ + W S M+
Sbjct: 250 DAKVDIWSSCCMMLHML 266
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Query: 428 SRKLQTKEIIRIAIDVAE---GIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + + +++ G+ +RD+ Q +LLD V L D G
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 484 CKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSP 543
Y Y + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 173 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDSG 228
Query: 544 VQAAVGI 550
V V I
Sbjct: 229 VDQLVEI 235
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G
Sbjct: 126 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 185
Query: 484 CKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSP 543
Y Y + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 186 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDSG 241
Query: 544 VQAAVGI 550
V V I
Sbjct: 242 VDQLVEI 248
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 85/203 (41%), Gaps = 37/203 (18%)
Query: 343 EFIDQIGPNSFKGVYKGKR------VGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNIL 396
E +++IG ++ V+K K V +++++ D +++ L HKNI+
Sbjct: 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 397 QFYCVCVDENHGLCVVTKLME----------GGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
+ + V + + L +V + + G ++ I+KS Q + +G
Sbjct: 65 RLHDV-LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQ----------LLKG 113
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEII 506
+ F + V +RDL Q +L++R+G + L + G+ A E + P+++
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
Query: 507 AGDPESVSETWMSNVYSFGMVIW 529
G + +YS + +W
Sbjct: 174 FG----------AKLYSTSIDMW 186
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Query: 428 SRKLQTKEIIRIAIDVAE---GIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + + +++ G+ +RD+ Q +LLD V L D G
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 484 CKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSP 543
Y Y + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 173 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDSG 228
Query: 544 VQAAVGI 550
V V I
Sbjct: 229 VDQLVEI 235
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 31/221 (14%)
Query: 348 IGPNSFKGVYK------GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNI--LQFY 399
IG SF VY+ G+ V I+K+ + E ++ + L H NI L+++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL------DHCNIVRLRYF 81
Query: 400 CVCVDENHGLCVVTKLMEGGSVNDLILK-----SRKLQTKEIIRIAI---DVAEGIKFLN 451
E + + +++ V + + + SR QT +I + + + + +++
Sbjct: 82 FYSSGEKKDVVYLNLVLD--YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 452 DHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTACKSV-GEATEYETDGYRWLAPEIIAGD 509
G+ +RD+ Q +LLD V L D G +A + V GE + APE+I G
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 510 PESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGI 550
+ S +V+S G V+ E++ G+ + S V V I
Sbjct: 198 TDYTSSI---DVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G
Sbjct: 147 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206
Query: 484 CKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSP 543
Y Y + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 207 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDSG 262
Query: 544 VQAAVGI 550
V V I
Sbjct: 263 VDQLVEI 269
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G
Sbjct: 149 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 208
Query: 484 CKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSP 543
Y Y + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 209 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDSG 264
Query: 544 VQAAVGI 550
V V I
Sbjct: 265 VDQLVEI 271
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G
Sbjct: 141 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 200
Query: 484 CKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSP 543
Y Y + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 201 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDSG 256
Query: 544 VQAAVGI 550
V V I
Sbjct: 257 VDQLVEI 263
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G
Sbjct: 151 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 210
Query: 484 CKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSP 543
Y Y + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 211 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDSG 266
Query: 544 VQAAVGI 550
V V I
Sbjct: 267 VDQLVEI 273
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 371 DKGNAYEFELRKDLLE------LMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSV 421
DK ++ ++K LE LM C I+ Y V E + + +L+EGGS+
Sbjct: 95 DKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGA-VREGPWVNIFMELLEGGSL 153
Query: 422 NDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHG-NVCLGDMGI 480
L+ + L + EG+++L+ + + D+ + +LL G + L D G
Sbjct: 154 GQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGH 213
Query: 481 VTACKSVGEATEYETDGY-----RWLAPEIIAG 508
+ G + T Y +APE++ G
Sbjct: 214 AVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 484 CKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSP 543
Y Y + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 173 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDSG 228
Query: 544 VQAAVGI 550
V V I
Sbjct: 229 VDQLVEI 235
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G
Sbjct: 192 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 251
Query: 484 CKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSP 543
Y Y + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 252 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDSG 307
Query: 544 VQAAVGI 550
V V I
Sbjct: 308 VDQLVEI 314
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/222 (18%), Positives = 91/222 (40%), Gaps = 20/222 (9%)
Query: 377 EFELRKDLLELMTCGHKNILQFYCVCVDE---------NHGLCVVTKLMEGGSVNDLILK 427
E ++K++ L HKN++Q V +E + +C + ++++ +
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDS-------VP 102
Query: 428 SRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKS- 486
++ + + +G+++L+ G+ ++D+ +LL G + + +G+ A
Sbjct: 103 EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162
Query: 487 VGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQA 546
+ T + G P IA ++ S + +++S G+ ++ + TG + + +
Sbjct: 163 AADDTCRTSQGSPAFQPPEIANGLDTFS-GFKVDIWSAGVTLYNITTGLYPFEGDNIYKL 221
Query: 547 AVGIAACGLRPEIPKDCPQILKSLMIKCWNNSPSKRPQFSEI 588
I IP DC L L+ P+KR +I
Sbjct: 222 FENIGKGSY--AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQI 261
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G +A
Sbjct: 114 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SA 171
Query: 484 CKSV-GEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
+ V GE + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 172 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDS 228
Query: 543 PVQAAVGI 550
V V I
Sbjct: 229 GVDQLVEI 236
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G
Sbjct: 118 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 177
Query: 484 CKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSP 543
Y Y + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 178 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDSG 233
Query: 544 VQAAVGI 550
V V I
Sbjct: 234 VDQLVEI 240
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 27/197 (13%)
Query: 347 QIGPNSFKGVYKGKRVGIEKLKGCDKGNAYEFELRKDLLE------LMTCG---HKNILQ 397
++G SF V++ K DK ++ ++K LE L+ C I+
Sbjct: 79 RLGRGSFGEVHRMK----------DKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVP 128
Query: 398 FYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAY 457
Y V E + + +L+EGGS+ LI + L + EG+++L+ + +
Sbjct: 129 LYGA-VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 458 RDLNSQRILLDRHGN-VCLGDMGIVTACKSVGEATEYETDGY-----RWLAPEIIAGDP- 510
D+ + +LL G+ L D G + G T Y +APE++ G P
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 247
Query: 511 ESVSETWMSNVYSFGMV 527
++ + W S M+
Sbjct: 248 DAKVDIWSSCCMMLHML 264
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G +A
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SA 170
Query: 484 CKSV-GEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
+ V GE + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 171 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDS 227
Query: 543 PVQAAVGI 550
V V I
Sbjct: 228 GVDQLVEI 235
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G +A
Sbjct: 132 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SA 189
Query: 484 CKSV-GEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
+ V GE + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 190 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDS 246
Query: 543 PVQAAVGI 550
V V I
Sbjct: 247 GVDQLVEI 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G +A
Sbjct: 121 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SA 178
Query: 484 CKSV-GEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
+ V GE + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 179 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDS 235
Query: 543 PVQAAVGI 550
V V I
Sbjct: 236 GVDQLVEI 243
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G +A
Sbjct: 125 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SA 182
Query: 484 CKSV-GEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
+ V GE + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 183 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDS 239
Query: 543 PVQAAVGI 550
V V I
Sbjct: 240 GVDQLVEI 247
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G +A
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SA 170
Query: 484 CKSV-GEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
+ V GE + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 171 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDS 227
Query: 543 PVQAAVGI 550
V V I
Sbjct: 228 GVDQLVEI 235
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G +A
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SA 170
Query: 484 CKSV-GEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
+ V GE + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 171 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDS 227
Query: 543 PVQAAVGI 550
V V I
Sbjct: 228 GVDQLVEI 235
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G +A
Sbjct: 117 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SA 174
Query: 484 CKSV-GEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
+ V GE + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 175 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDS 231
Query: 543 PVQAAVGI 550
V V I
Sbjct: 232 GVDQLVEI 239
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 16/153 (10%)
Query: 371 DKGNAYEFELRKDLLE------LMTCG---HKNILQFYCVCVDENHGLCVVTKLMEGGSV 421
DK ++ ++K LE LM C I+ Y V E + + +L+EGGS+
Sbjct: 114 DKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGA-VREGPWVNIFMELLEGGSL 172
Query: 422 NDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHG-NVCLGDMGI 480
L+ + L + EG+++L+ + + D+ + +LL G + L D G
Sbjct: 173 GQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGH 232
Query: 481 VTACKSVGEATEYETDGY-----RWLAPEIIAG 508
+ G T Y +APE++ G
Sbjct: 233 AVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G +A
Sbjct: 125 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SA 182
Query: 484 CKSV-GEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
+ V GE + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 183 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDS 239
Query: 543 PVQAAVGI 550
V V I
Sbjct: 240 GVDQLVEI 247
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 428 SRKLQTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC-LGDMGIVTA 483
SR QT +I + + + + +++ G+ +RD+ Q +LLD V L D G +A
Sbjct: 147 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SA 204
Query: 484 CKSV-GEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACS 542
+ V GE + APE+I G + S +V+S G V+ E++ G+ + S
Sbjct: 205 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI---DVWSAGCVLAELLLGQPIFPGDS 261
Query: 543 PVQAAVGI 550
V V I
Sbjct: 262 GVDQLVEI 269
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 343 EFIDQIGPNSFKGVYK------GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNIL 396
E + +IG +F V+K G++V ++K+ ++ + +++ L H+N++
Sbjct: 21 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVV 80
Query: 397 QFYCVCVDE-------NHGLCVVTKLME---GGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
+C + + +V E G ++++++K EI R+ + G
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNG 137
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTA 483
+ +++ + + +RD+ + +L+ R G + L D G+ A
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 175
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 176 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 214
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 174
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 175 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 213
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 28/158 (17%)
Query: 451 NDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD--------GYRWLA 502
N+ + +RD+ IL+D++G V L D G +EY D Y ++
Sbjct: 169 NEKNICHRDVKPSNILMDKNGRVKLSDFG----------ESEYMVDKKIKGSRGTYEFMP 218
Query: 503 PEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYA-ACSPVQAAVGIAACGLRPEIPK 561
PE + ES +++S G+ ++ M ++ S V+ I + E P
Sbjct: 219 PEFFSN--ESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI--EYPL 274
Query: 562 DCPQILKSLMIK---CWNNSPSKRPQFSEIISLLLRTN 596
D L L K C NN S + + L LR N
Sbjct: 275 DRNHFLYPLTNKKSTCSNNFLSNED--IDFLKLFLRKN 310
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 173
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 174 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 212
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 115 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 172
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 173 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 211
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANAFVGT 195
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 196 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 234
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANSFVGT 198
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 199 AQYVSPELLT----EKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 197
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 198 AQYVSPELLT----EKSAXKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANSFVGT 194
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 195 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 233
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 343 EFIDQIGPNSFKGVYK------GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNIL 396
E + +IG +F V+K G++V ++K+ ++ + +++ L H+N++
Sbjct: 21 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVV 80
Query: 397 QFYCVCVDE-------NHGLCVVTKLME---GGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
+C + + +V E G ++++++K EI R+ + G
Sbjct: 81 NLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNG 137
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTA 483
+ +++ + + +RD+ + +L+ R G + L D G+ A
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 122 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 179
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 180 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 218
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 343 EFIDQIGPNSFKGVYK------GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNIL 396
E + +IG +F V+K G++V ++K+ ++ + +++ L H+N++
Sbjct: 20 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVV 79
Query: 397 QFYCVCVDE-------NHGLCVVTKLME---GGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
+C + + +V E G ++++++K EI R+ + G
Sbjct: 80 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNG 136
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTA 483
+ +++ + + +RD+ + +L+ R G + L D G+ A
Sbjct: 137 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 173
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 195
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 196 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 234
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 145 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 202
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 203 AQYVSPELLT----EKSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 195
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 196 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 197
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 198 AQYVSPELLT----EKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 197
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 198 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 236
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 198
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 199 AQYVSPELLT----EKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 195
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 196 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 197
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 198 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 236
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 194
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 195 AQYVSPELLTEKSACKS----SDLWALGCIIYQLVAGLPPFRA 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 143 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 200
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 201 AQYVSPELLT----EKSACKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 343 EFIDQIGPNSFKGVYK------GKRVGIEKLKGCDKGNAYEFELRKDLLELMTCGHKNIL 396
E + +IG +F V+K G++V ++K+ ++ + +++ L H+N++
Sbjct: 21 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVV 80
Query: 397 QFYCVCVDE-------NHGLCVVTKLME---GGSVNDLILKSRKLQTKEIIRIAIDVAEG 446
+C + + +V E G ++++++K EI R+ + G
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNG 137
Query: 447 IKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTA 483
+ +++ + + +RD+ + +L+ R G + L D G+ A
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 442 DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGY--- 498
++ +++L+ G+ +RDL + ILL+ ++ + D G TA E+ + + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG--TAKVLSPESKQARANXFVGT 197
Query: 499 -RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA 540
++++PE++ S S++++ G +I+++V G + A
Sbjct: 198 AQYVSPELLT----EKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGN---VCLGDMGIVTACKSVGEATEYETDGYR 499
+ E +++ +D+ + +RD+ + +LL N V LGD G+ G
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPH 198
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
++APE++ +P +V+ G++++ +++G
Sbjct: 199 FMAPEVVKREPYGKP----VDVWGCGVILFILLSG 229
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Query: 438 RIAIDVAEGIKFLNDH-GVAYRDLNSQRILLDRHGNVCLGDMGIV-TACKSVGEATEYET 495
+IA+ + + ++ L+ V +RD+ +L++ G V + D GI SV + +
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 496 DGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAA-CSPVQAAVGIAACG 554
Y +APE I + + S+++S G+ + E+ Y + +P Q +
Sbjct: 217 KPY--MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-E 273
Query: 555 LRPEIPKD-CPQILKSLMIKCWNNSPSKRPQFSEII 589
P++P D +C + +RP + E++
Sbjct: 274 PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 432 QTKEIIRIAI---DVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVC----LGDMGIVTAC 484
QT ++ I + + + +++ G+ +RD+ Q +LLD V G I+ A
Sbjct: 136 QTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA- 194
Query: 485 KSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPV 544
GE + APE+I G + + T +++S G V+ E++ G+ + S +
Sbjct: 195 ---GEPNVSXICSRYYRAPELIFG---ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI 248
Query: 545 QAAVGI 550
V I
Sbjct: 249 DQLVEI 254
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 410 CVVTKLMEGGSVNDLI-LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLD 468
+V +L+ G S+ DL L R K ++ IAI + +++++ + YRD+ + L+
Sbjct: 73 AMVLELL-GPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIG 131
Query: 469 RHGN 472
R GN
Sbjct: 132 RQGN 135
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 438 RIAIDVAEGIKFLNDH-GVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETD 496
+IA+ + + ++ L+ V +RD+ +L++ G V + D GI + A + +
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI-SGYLVDDVAKDIDAG 171
Query: 497 GYRWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAAC-SPVQAAVGIAACGL 555
++APE I + + S+++S G+ + E+ Y + +P Q +
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP- 230
Query: 556 RPEIPKD-CPQILKSLMIKCWNNSPSKRPQFSEII 589
P++P D +C + +RP + E++
Sbjct: 231 SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 418 GGSVNDLI-LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
G S+ DL L R K ++ IAI + +++++ + YRD+ + L+ R GN
Sbjct: 88 GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQ 147
Query: 477 DMGIVTACKSVGEATEY 493
+ I+ G A EY
Sbjct: 148 VIHII----DFGLAKEY 160
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 15/140 (10%)
Query: 407 HGLCVVTKLMEGGSVNDLILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRIL 466
H L + K N K +L + + + +GI +L+ + V +RDL IL
Sbjct: 104 HDLWHIIKFHRASKANK---KPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANIL 160
Query: 467 L----DRHGNVCLGDMGIV----TACKSVGEATEYETDGYRWLAPEIIAGDPESVSETWM 518
+ G V + DMG + K + + + + APE++ G + T
Sbjct: 161 VMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV-TFWYRAPELLLG---ARHYTKA 216
Query: 519 SNVYSFGMVIWEMVTGEAAY 538
++++ G + E++T E +
Sbjct: 217 IDIWAIGCIFAELLTSEPIF 236
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 418 GGSVNDLI-LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGN 472
G S+ DL L R K ++ IAI + +++++ + YRD+ + L+ R GN
Sbjct: 88 GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGN 143
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 418 GGSVNDLI-LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGN 472
G S+ DL L R K ++ IAI + +++++ + YRD+ + L+ R GN
Sbjct: 109 GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGN 164
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 82/215 (38%), Gaps = 31/215 (14%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDL 384
+ + E + +IG ++ VYK G V ++ ++ G E L L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL---L 57
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK-----LQTKEIIRI 439
L H N+++ VC + L+ DL K L + I +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGIV-TACKSVGEATEYETDGY 498
G+ FL+ + + +RDL + IL+ G V L D G+ + A T Y
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWY 177
Query: 499 RWLAPEIIAGDPESVSETWMSNV--YSFGMVIWEM 531
R APE++ + T+ + V +S G + EM
Sbjct: 178 R--APEVL------LQSTYATPVDMWSVGCIFAEM 204
>pdb|1QI9|A Chain A, X-ray Siras Structure Determination Of A
Vanadium-dependent Haloperoxidase From Ascophyllum
Nodosum At 2.0 A Resolution
pdb|1QI9|B Chain B, X-ray Siras Structure Determination Of A
Vanadium-dependent Haloperoxidase From Ascophyllum
Nodosum At 2.0 A Resolution
Length = 556
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 311 PSSSFVVSVDEWQTVQSGGEEIGRWLLNSDNLEFI 345
P +++V DEW +Q+GG G LL+ D L F+
Sbjct: 232 PDVNYMVDFDEWLNIQNGGPPAGPELLD-DELRFV 265
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 20/161 (12%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDL 384
+ + E + +IG ++ VYK G V ++ ++ G E L L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL---L 57
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK-----LQTKEIIRI 439
L H N+++ VC + L+ DL K L + I +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI 480
G+ FL+ + + +RDL + IL+ G V L D G+
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 20/161 (12%)
Query: 337 LNSDNLEFIDQIGPNSFKGVYK------GKRVGIEKLK------GCDKGNAYEFELRKDL 384
+ + E + +IG ++ VYK G V ++ ++ G E L L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL---L 57
Query: 385 LELMTCGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRK-----LQTKEIIRI 439
L H N+++ VC + L+ DL K L + I +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 440 AIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI 480
G+ FL+ + + +RDL + IL+ G V L D G+
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 446 GIKFLNDHGVAYRDLNSQRILLDRHGNVCLGDMGI 480
G+ FL+ + + +RDL + IL+ G V L D G+
Sbjct: 132 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 166
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGN---VCLGDMGIVTACKSVGEATEYETDGYR 499
+ E +++ +D+ + +RD+ +LL N V LG G+ G
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 200
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
++APE++ +P +V+ G++++ +++G
Sbjct: 201 FMAPEVVKREPYGKP----VDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 443 VAEGIKFLNDHGVAYRDLNSQRILLDRHGN---VCLGDMGIVTACKSVGEATEYETDGYR 499
+ E +++ +D+ + +RD+ +LL N V LG G+ G
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 198
Query: 500 WLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTG 534
++APE++ +P +V+ G++++ +++G
Sbjct: 199 FMAPEVVKREPYGKP----VDVWGCGVILFILLSG 229
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 331 EIGRWLLNSDNLEFIDQIGPNSFKGVYK-------GKRVGIEKLKGCDK-GNAYEFELRK 382
+G WL + E + +G +F V + G RV ++ +K +K A E+
Sbjct: 26 HVGDWL--QERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEI-- 81
Query: 383 DLLELMT---CGHKNILQFYCVCVDENHGLCVVTKLMEGGSVNDLILKSRKLQ--TKEII 437
++LE + +KN+ D + +C+ +L+ G S D + + L ++
Sbjct: 82 NVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVR 140
Query: 438 RIAIDVAEGIKFLNDHGVAYRDLNSQRILL 467
+A + + +KFL+D+ + + DL + IL
Sbjct: 141 HMAFQLCQAVKFLHDNKLTHTDLKPENILF 170
>pdb|4E6M|A Chain A, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|B Chain B, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|C Chain C, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|D Chain D, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|E Chain E, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|F Chain F, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|G Chain G, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|H Chain H, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
Length = 423
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 499 RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAV 548
R LAP I+ DP ++ + W + F W M G YA S + A+
Sbjct: 81 RDLAPLIVGEDPLNIEKIWE---FFFRKTFWGMGGGNVFYAGMSAIDIAL 127
>pdb|2GL5|A Chain A, Crystal Structure Of Putative Dehydratase From Salmonella
Thyphimurium
pdb|2GL5|B Chain B, Crystal Structure Of Putative Dehydratase From Salmonella
Thyphimurium
Length = 410
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 499 RWLAPEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAV 548
R LAP I+ DP ++ + W + F W M G YA S + A+
Sbjct: 60 RDLAPLIVGEDPLNIEKIWE---FFFRKTFWGMGGGNVFYAGMSAIDIAL 106
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELR--KDLLELMTCGHKNILQFYCV----CVDENHGLCVV 412
G+ V I+K++ DK F LR +++ L H+NI+ + + + + + ++
Sbjct: 36 GEIVAIKKIEPFDKP---LFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92
Query: 413 TKLMEGGSVNDL--ILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+LM+ DL ++ ++ L I +K L+ V +RDL +L++ +
Sbjct: 93 QELMQ----TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN 148
Query: 471 GNVCLGDMGIVTAC-KSVGEATE--------YETDGYRWL-APEIIAGDPESVSETWMSN 520
++ + D G+ +S + +E E RW APE++ S + +
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLT---SAKYSRAMD 205
Query: 521 VYSFGMVIWEM 531
V+S G ++ E+
Sbjct: 206 VWSCGCILAEL 216
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 418 GGSVNDLI-LKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRHGNVCLG 476
G S+ DL L R K ++ IAI + +++++ + YRD+ + L+ R G
Sbjct: 83 GPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQH 142
Query: 477 DMGIVTACKSVGEATEY 493
+ I+ G A EY
Sbjct: 143 AIHII----DFGLAKEY 155
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 37/181 (20%)
Query: 409 LCVVTKLMEGGSVNDLILKSRK--LQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRIL 466
+C++ + + G S+ ++I ++ ++I I++ + + +L + + DL + IL
Sbjct: 111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENIL 169
Query: 467 LD-------------------------RHGNVCLGDMGIVTACKSVGEATEYETDGYRWL 501
LD + + L D G T KS + T YR
Sbjct: 170 LDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF-KSDYHGSIINTRQYR-- 226
Query: 502 APEIIAGDPESVSETWMSNVYSFGMVIWEMVTGEAAYAACSPVQAAVGIAACGLRPEIPK 561
APE+I VS S+++SFG V+ E+ TG + ++ + + ++P IPK
Sbjct: 227 APEVILNLGWDVS----SDMWSFGCVLAELYTGSLLFRTHEHME-HLAMMESIIQP-IPK 280
Query: 562 D 562
+
Sbjct: 281 N 281
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELR--KDLLELMTCGHKNILQFYCV----CVDENHGLCVV 412
G+ V I+K++ DK F LR +++ L H+NI+ + + + + + ++
Sbjct: 36 GEIVAIKKIEPFDKP---LFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92
Query: 413 TKLMEGGSVNDL--ILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+LM+ DL ++ ++ L I +K L+ V +RDL +L++ +
Sbjct: 93 QELMQ----TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN 148
Query: 471 GNVCLGDMGIVTAC-KSVGEATE--------YETDGYRWL-APEIIAGDPESVSETWMSN 520
++ + D G+ +S + +E E RW APE++ S + +
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLT---SAKYSRAMD 205
Query: 521 VYSFGMVIWEM 531
V+S G ++ E+
Sbjct: 206 VWSCGCILAEL 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 359 GKRVGIEKLKGCDKGNAYEFELR--KDLLELMTCGHKNILQFYCV----CVDENHGLCVV 412
G+ V I+K++ DK F LR +++ L H+NI+ + + + + + ++
Sbjct: 36 GEIVAIKKIEPFDKP---LFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92
Query: 413 TKLMEGGSVNDL--ILKSRKLQTKEIIRIAIDVAEGIKFLNDHGVAYRDLNSQRILLDRH 470
+LM+ DL ++ ++ L I +K L+ V +RDL +L++ +
Sbjct: 93 QELMQ----TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN 148
Query: 471 GNVCLGDMGIVTAC-KSVGEATE--------YETDGYRWL-APEIIAGDPESVSETWMSN 520
++ + D G+ +S + +E E RW APE++ S + +
Sbjct: 149 CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT---SAKYSRAMD 205
Query: 521 VYSFGMVIWEM 531
V+S G ++ E+
Sbjct: 206 VWSCGCILAEL 216
>pdb|2AR0|A Chain A, Crystal Structure Of Type I Restriction Enzyme Ecoki M
Protein (Ec 2.1.1.72) (M.Ecoki)
pdb|2AR0|B Chain B, Crystal Structure Of Type I Restriction Enzyme Ecoki M
Protein (Ec 2.1.1.72) (M.Ecoki)
Length = 541
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
L D GV+Y++ ++ L + + CK G+ EY +GYRW
Sbjct: 19 LRDGGVSYQNYVNE-----------LASLLFLKXCKETGQEAEYLPEGYRW 58
>pdb|2Y7C|B Chain B, Atomic Model Of The Ocr-Bound Methylase Complex From The
Type I Restriction-Modification Enzyme Ecoki (M2s1).
Based On Fitting Into Em Map 1534.
pdb|2Y7C|C Chain C, Atomic Model Of The Ocr-Bound Methylase Complex From The
Type I Restriction-Modification Enzyme Ecoki (M2s1).
Based On Fitting Into Em Map 1534.
pdb|2Y7H|B Chain B, Atomic Model Of The Dna-Bound Methylase Complex From The
Type I Restriction-Modification Enzyme Ecoki (M2s1).
Based On Fitting Into Em Map 1534.
pdb|2Y7H|C Chain C, Atomic Model Of The Dna-Bound Methylase Complex From The
Type I Restriction-Modification Enzyme Ecoki (M2s1).
Based On Fitting Into Em Map 1534
Length = 529
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
Query: 450 LNDHGVAYRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRW 500
L D GV+Y++ ++ L + + CK G+ EY +GYRW
Sbjct: 17 LRDGGVSYQNYVNE-----------LASLLFLKMCKETGQEAEYLPEGYRW 56
>pdb|1SVL|A Chain A, Co-Crystal Structure Of Sv40 Large T Antigen Helicase
Domain And Adp
pdb|1SVL|B Chain B, Co-Crystal Structure Of Sv40 Large T Antigen Helicase
Domain And Adp
pdb|1SVL|C Chain C, Co-Crystal Structure Of Sv40 Large T Antigen Helicase
Domain And Adp
pdb|1SVM|A Chain A, Co-Crystal Structure Of Sv40 Large T Antigen Helicase
Domain And Atp
pdb|1SVM|B Chain B, Co-Crystal Structure Of Sv40 Large T Antigen Helicase
Domain And Atp
pdb|1SVM|C Chain C, Co-Crystal Structure Of Sv40 Large T Antigen Helicase
Domain And Atp
pdb|1SVM|D Chain D, Co-Crystal Structure Of Sv40 Large T Antigen Helicase
Domain And Atp
pdb|1SVM|E Chain E, Co-Crystal Structure Of Sv40 Large T Antigen Helicase
Domain And Atp
pdb|1SVM|F Chain F, Co-Crystal Structure Of Sv40 Large T Antigen Helicase
Domain And Atp
pdb|1SVO|A Chain A, Structure Of Sv40 Large T Antigen Helicase Domain
pdb|1SVO|B Chain B, Structure Of Sv40 Large T Antigen Helicase Domain
Length = 377
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 15/94 (15%)
Query: 84 GVGVGARDQPTASSNSKIETSRKVVWGSVVRNL--------TQLYPGS-------QLPER 128
G G +RD P+ + ++ R + GSV NL TQ++P +P+
Sbjct: 227 GTGGESRDLPSGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEYSVPKT 286
Query: 129 LVSNMRKHYDSLPLSYAQAGFDMKEVFLHIKLIE 162
L + K D P Y + + E L ++I+
Sbjct: 287 LQARFVKQIDFRPKDYLKHCLERSEFLLEKRIIQ 320
>pdb|2H1L|A Chain A, The Structure Of The Oncoprotein Sv40 Large T Antigen And
P53 Tumor Suppressor Complex
pdb|2H1L|B Chain B, The Structure Of The Oncoprotein Sv40 Large T Antigen And
P53 Tumor Suppressor Complex
pdb|2H1L|C Chain C, The Structure Of The Oncoprotein Sv40 Large T Antigen And
P53 Tumor Suppressor Complex
pdb|2H1L|D Chain D, The Structure Of The Oncoprotein Sv40 Large T Antigen And
P53 Tumor Suppressor Complex
pdb|2H1L|E Chain E, The Structure Of The Oncoprotein Sv40 Large T Antigen And
P53 Tumor Suppressor Complex
pdb|2H1L|F Chain F, The Structure Of The Oncoprotein Sv40 Large T Antigen And
P53 Tumor Suppressor Complex
pdb|2H1L|G Chain G, The Structure Of The Oncoprotein Sv40 Large T Antigen And
P53 Tumor Suppressor Complex
pdb|2H1L|H Chain H, The Structure Of The Oncoprotein Sv40 Large T Antigen And
P53 Tumor Suppressor Complex
pdb|2H1L|I Chain I, The Structure Of The Oncoprotein Sv40 Large T Antigen And
P53 Tumor Suppressor Complex
pdb|2H1L|J Chain J, The Structure Of The Oncoprotein Sv40 Large T Antigen And
P53 Tumor Suppressor Complex
pdb|2H1L|K Chain K, The Structure Of The Oncoprotein Sv40 Large T Antigen And
P53 Tumor Suppressor Complex
pdb|2H1L|L Chain L, The Structure Of The Oncoprotein Sv40 Large T Antigen And
P53 Tumor Suppressor Complex
Length = 370
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 15/94 (15%)
Query: 84 GVGVGARDQPTASSNSKIETSRKVVWGSVVRNL--------TQLYPGS-------QLPER 128
G G +RD P+ + ++ R + GSV NL TQ++P +P+
Sbjct: 220 GTGGESRDLPSGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEYSVPKT 279
Query: 129 LVSNMRKHYDSLPLSYAQAGFDMKEVFLHIKLIE 162
L + K D P Y + + E L ++I+
Sbjct: 280 LQARFVKQIDFRPKDYLKHCLERSEFLLEKRIIQ 313
>pdb|1N25|A Chain A, Crystal Structure Of The Sv40 Large T Antigen Helicase
Domain
pdb|1N25|B Chain B, Crystal Structure Of The Sv40 Large T Antigen Helicase
Domain
Length = 368
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 15/94 (15%)
Query: 84 GVGVGARDQPTASSNSKIETSRKVVWGSVVRNL--------TQLYPGS-------QLPER 128
G G +RD P+ + ++ R + GSV NL TQ++P +P+
Sbjct: 218 GTGGESRDLPSGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEYSVPKT 277
Query: 129 LVSNMRKHYDSLPLSYAQAGFDMKEVFLHIKLIE 162
L + K D P Y + + E L ++I+
Sbjct: 278 LQARFVKQIDFRPKDYLKHCLERSEFLLEKRIIQ 311
>pdb|4E2I|A Chain A, The Complex Structure Of The Sv40 Helicase Large T Antigen
And P68 Subunit Of Dna Polymerase Alpha-Primase
pdb|4E2I|B Chain B, The Complex Structure Of The Sv40 Helicase Large T Antigen
And P68 Subunit Of Dna Polymerase Alpha-Primase
pdb|4E2I|C Chain C, The Complex Structure Of The Sv40 Helicase Large T Antigen
And P68 Subunit Of Dna Polymerase Alpha-Primase
pdb|4E2I|D Chain D, The Complex Structure Of The Sv40 Helicase Large T Antigen
And P68 Subunit Of Dna Polymerase Alpha-Primase
pdb|4E2I|E Chain E, The Complex Structure Of The Sv40 Helicase Large T Antigen
And P68 Subunit Of Dna Polymerase Alpha-Primase
pdb|4E2I|F Chain F, The Complex Structure Of The Sv40 Helicase Large T Antigen
And P68 Subunit Of Dna Polymerase Alpha-Primase
pdb|4E2I|G Chain G, The Complex Structure Of The Sv40 Helicase Large T Antigen
And P68 Subunit Of Dna Polymerase Alpha-Primase
pdb|4E2I|H Chain H, The Complex Structure Of The Sv40 Helicase Large T Antigen
And P68 Subunit Of Dna Polymerase Alpha-Primase
pdb|4E2I|I Chain I, The Complex Structure Of The Sv40 Helicase Large T Antigen
And P68 Subunit Of Dna Polymerase Alpha-Primase
pdb|4E2I|J Chain J, The Complex Structure Of The Sv40 Helicase Large T Antigen
And P68 Subunit Of Dna Polymerase Alpha-Primase
pdb|4E2I|K Chain K, The Complex Structure Of The Sv40 Helicase Large T Antigen
And P68 Subunit Of Dna Polymerase Alpha-Primase
pdb|4E2I|L Chain L, The Complex Structure Of The Sv40 Helicase Large T Antigen
And P68 Subunit Of Dna Polymerase Alpha-Primase
Length = 362
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 15/94 (15%)
Query: 84 GVGVGARDQPTASSNSKIETSRKVVWGSVVRNL--------TQLYPGS-------QLPER 128
G G +RD P+ + ++ R + GSV NL TQ++P +P+
Sbjct: 212 GTGGESRDLPSGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEYSVPKT 271
Query: 129 LVSNMRKHYDSLPLSYAQAGFDMKEVFLHIKLIE 162
L + K D P Y + + E L ++I+
Sbjct: 272 LQARFVKQIDFRPKDYLKHCLERSEFLLEKRIIQ 305
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 457 YRDLNSQRILLDRHGNVCLGDMGIVTACKSVGEATEYETDGYRWLAPEIIAGDPESVSE- 515
+RD+ + IL+ L D GI +A T G + PE SE
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXA------PERFSES 210
Query: 516 --TWMSNVYSFGMVIWEMVTGEAAY 538
T+ +++Y+ V++E +TG Y
Sbjct: 211 HATYRADIYALTCVLYECLTGSPPY 235
>pdb|2GRK|A Chain A, Crystal Structure Of Ectromelia Virus Evm1 Chemokine
Binding Protein
pdb|2GRK|B Chain B, Crystal Structure Of Ectromelia Virus Evm1 Chemokine
Binding Protein
Length = 228
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 31/137 (22%)
Query: 484 CKSVGEATEYETDGYRWLAPEIIAGDPESVSETWMSNV-----YSFGMV-------IWEM 531
C+SV E TE E DG ++ E++ GDP T+ + V +FG I E
Sbjct: 36 CQSVTEVTESEDDG---VSEEVVKGDP----TTYYTVVGGGLRMNFGFTKCPQIKSISES 88
Query: 532 VTGEAAYAACSPVQAAVGIAACGLRPE----IPKDCPQILKSLMIKCWNNSPSKRPQFSE 587
G A S V GI + + E + DC S+ IKC S+ + S
Sbjct: 89 ADGNTVNARLSSVSPMYGIESPAITHEEALAMINDCAV---SINIKC-----SEEEKDSN 140
Query: 588 IISLLLRTNNISNSSNR 604
I + + +NIS+ R
Sbjct: 141 IKTHPVLGSNISHKKVR 157
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,115,597
Number of Sequences: 62578
Number of extensions: 711495
Number of successful extensions: 3923
Number of sequences better than 100.0: 982
Number of HSP's better than 100.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 331
Number of HSP's that attempted gapping in prelim test: 2282
Number of HSP's gapped (non-prelim): 1028
length of query: 604
length of database: 14,973,337
effective HSP length: 104
effective length of query: 500
effective length of database: 8,465,225
effective search space: 4232612500
effective search space used: 4232612500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)