BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007433
(604 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 161/364 (44%), Gaps = 88/364 (24%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F LK LG G G V L + T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
HPFL L F+T C VME+ GG+L H R+R FSE +FY AE++ AL+
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 265
Query: 330 YLHM-LGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
YLH +VYRDLK EN+++ +DGHI ++DF L
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL--------------------------- 298
Query: 389 CVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARS 448
C E I+ T C +P + + PE++ + R+
Sbjct: 299 -----CKEG--IKDGATMKTFCGTPEYLA-------------------PEVLEDNDYGRA 332
Query: 449 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+ + W G+ +YE++ G+ PF ++ ++ + +
Sbjct: 333 VDW-----------------------WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI 369
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRL-ACRRGATEIKQHPFFQGVNWALI--RCASPP 565
RFP + + A+ L+ GLL K+P+ RL A EI QH FF G+ W + + SPP
Sbjct: 370 RFPRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 427
Query: 566 EIPK 569
P+
Sbjct: 428 FKPQ 431
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 161/364 (44%), Gaps = 88/364 (24%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F LK LG G G V L + T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
HPFL L F+T C VME+ GG+L H R+R FSE +FY AE++ AL+
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 262
Query: 330 YLHM-LGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
YLH +VYRDLK EN+++ +DGHI ++DF L
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL--------------------------- 295
Query: 389 CVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARS 448
C E I+ T C +P + + PE++ + R+
Sbjct: 296 -----CKEG--IKDGATMKTFCGTPEYLA-------------------PEVLEDNDYGRA 329
Query: 449 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+ + W G+ +YE++ G+ PF ++ ++ + +
Sbjct: 330 VDW-----------------------WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI 366
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRL-ACRRGATEIKQHPFFQGVNWALI--RCASPP 565
RFP + + A+ L+ GLL K+P+ RL A EI QH FF G+ W + + SPP
Sbjct: 367 RFPRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 424
Query: 566 EIPK 569
P+
Sbjct: 425 FKPQ 428
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 154/348 (44%), Gaps = 85/348 (24%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
HPFL L F+T C VME+ GG+L H R+R F+E+ +FY AE++ ALE
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 122
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYC 389
YLH +VYRD+K EN+++ +DGHI ++DF L
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL---------------------------- 154
Query: 390 VQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSM 449
C E I T C +P + + PE++ + R++
Sbjct: 155 ----CKEG--ISDGATMKTFCGTPEYLA-------------------PEVLEDNDYGRAV 189
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ G G+ +YE++ G+ PF ++ ++ + +R
Sbjct: 190 DWWG-----------------------LGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 226
Query: 510 FPESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNW 556
FP + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW
Sbjct: 227 FPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 272
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 153/345 (44%), Gaps = 85/345 (24%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+ HPF
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
L L F+T C VME+ GG+L H R+R F+E+ +FY AE++ ALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLH 122
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQP 392
+VYRD+K EN+++ +DGHI ++DF L
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGL------------------------------- 151
Query: 393 ACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSMSFV 452
C E I T C +P + + PE++ + R++ +
Sbjct: 152 -CKEG--ISDGATMKTFCGTPEYLA-------------------PEVLEDNDYGRAVDWW 189
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPE 512
G G+ +YE++ G+ PF ++ ++ + +RFP
Sbjct: 190 G-----------------------LGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226
Query: 513 SPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNW 556
+ +S A+ L+ GLL K+P+ RL A E+ +H FF +NW
Sbjct: 227 T--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 154/348 (44%), Gaps = 85/348 (24%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
HPFL L F+T C VME+ GG+L H R+R F+E+ +FY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYC 389
YLH +VYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL---------------------------- 151
Query: 390 VQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSM 449
C E I T C +P + + PE++ + R++
Sbjct: 152 ----CKEG--ISDGATMKTFCGTPEYLA-------------------PEVLEDNDYGRAV 186
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ G G+ +YE++ G+ PF ++ ++ + +R
Sbjct: 187 DWWG-----------------------LGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 510 FPESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNW 556
FP + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW
Sbjct: 224 FPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 107/151 (70%), Gaps = 6/151 (3%)
Query: 215 FRLLKKLGCGDIGSVYL-SELTGT--KCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
F LLK LG G G V+L +++G+ + +AMKV+ KA+L+ R ++ R + ER+IL ++
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVN 85
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HPF+ L+ F+T+ L+++F GGDL T ++ F+E+ VKFY+AE+ LAL++L
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHL 143
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H LGI+YRDLKPEN+L+ E+GHI L+DF LS
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
++ SF GT EY+APE++ GH + DWW+FG+ ++E+L G PF+G + + T+ ++
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNRL-ACRRGATEIKQHPFFQGVNWALI--RCAS 563
L P+ +S A+ L++ L + P NRL A G EIK+H FF ++W + R
Sbjct: 243 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 300
Query: 564 PPEIP 568
PP P
Sbjct: 301 PPFKP 305
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 107/151 (70%), Gaps = 6/151 (3%)
Query: 215 FRLLKKLGCGDIGSVYL-SELTGT--KCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
F LLK LG G G V+L +++G+ + +AMKV+ KA+L+ R ++ R + ER+IL ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVN 84
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HPF+ L+ F+T+ L+++F GGDL T ++ F+E+ VKFY+AE+ LAL++L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHL 142
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H LGI+YRDLKPEN+L+ E+GHI L+DF LS
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
++ SF GT EY+APE++ GH + DWW+FG+ ++E+L G PF+G + + T+ ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNRL-ACRRGATEIKQHPFFQGVNWALI--RCAS 563
L P+ +S A+ L++ L + P NRL A G EIK+H FF ++W + R
Sbjct: 242 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 564 PPEIP 568
PP P
Sbjct: 300 PPFKP 304
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 107/151 (70%), Gaps = 6/151 (3%)
Query: 215 FRLLKKLGCGDIGSVYL-SELTGT--KCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
F LLK LG G G V+L +++G+ + +AMKV+ KA+L+ R ++ R + ER+IL ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVN 84
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HPF+ L+ F+T+ L+++F GGDL T ++ F+E+ VKFY+AE+ LAL++L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHL 142
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H LGI+YRDLKPEN+L+ E+GHI L+DF LS
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
++ SF GT EY+APE++ GH + DWW+FG+ ++E+L G PF+G + + T+ ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNRL-ACRRGATEIKQHPFFQGVNWALI--RCAS 563
L P+ +S A+ L++ L + P NRL A G EIK+H FF ++W + R
Sbjct: 242 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 564 PPEIP 568
PP P
Sbjct: 300 PPFKP 304
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 102/152 (67%), Gaps = 6/152 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT---GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSL 270
HF LLK LG G G V+L + +AMKV+ KA+L+ R ++ R + ER+IL +
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV-RTKMERDILADV 87
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
+HPF+ L+ F+T+ L+++F GGDL T ++ F+E+ VKFY+AE+ L L++
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALGLDH 145
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
LH LGI+YRDLKPEN+L+ E+GHI L+DF LS
Sbjct: 146 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
++ SF GT EY+APE++ +GH + DWW++G+ ++E+L G PF+G + + T+ ++
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNWALI--RCAS 563
L P+ +S A+ L++ L + P NRL GA EIK+H F+ ++W + R
Sbjct: 246 KLGMPQ--FLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIK 303
Query: 564 PPEIP 568
PP P
Sbjct: 304 PPFKP 308
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 108/159 (67%), Gaps = 9/159 (5%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYL-SELTG--TKCYFAMKVMDKASL-EKRKKLLRAQTERE 265
+G+ +F LLK LG G G V+L +++G T +AMKV+ KA++ +K K +TER+
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 266 ILQSLDH-PFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQPGKYFSEQAVKFYVAE 323
+L+ + PFL TL+ F+T+ L++++ GG+L T L QR+ F+E V+ YV E
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER---FTEHEVQIYVGE 167
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++LALE+LH LGI+YRD+K EN+L+ +GH++L+DF LS
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 10/141 (7%)
Query: 438 ELIAEPTNARSMSFVGTHEYLAPEIIKG--EGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
E +A+ T R+ F GT EY+AP+I++G GH AVDWW+ G+ +YELL G +PF
Sbjct: 208 EFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266
Query: 496 NRATLYNVVGQPLR----FPESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPF 550
+ + + + L+ +P+ +S A+DLI+ LL+K+P+ RL C R A EIK+H F
Sbjct: 267 EKNSQAEISRRILKSEPPYPQE--MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324
Query: 551 FQGVNWALIRCASPPEIPKPV 571
FQ +NW + P KPV
Sbjct: 325 FQKINWDDLAAKKVPAPFKPV 345
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T +FAMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T +FAMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T +FAMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 96/154 (62%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+++ + G+I ++DF L+ R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV 191
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIF 480
KP+N M +Q + +A+ R+ GT EYLAPEII +G+ AVDWW G+
Sbjct: 168 KPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 481 LYELLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CR 539
+YE+ G PF + +V +RFP S +DL++ LL + R +
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLK 285
Query: 540 RGATEIKQHPFFQGVNWALI--RCASPPEIPK 569
G +IK H +F +W I R P IPK
Sbjct: 286 NGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K +G G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGGD+ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K +G G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGGD+ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ + GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 96/154 (62%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+++ + G+I ++DF L+ R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV 191
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIF 480
KP+N M +Q + +A+ R+ GT EYLAPEII +G+ AVDWW G+
Sbjct: 168 KPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 481 LYELLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CR 539
+YE+ G PF + +V +RFP S +DL++ LL + R +
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLK 285
Query: 540 RGATEIKQHPFFQGVNWALI--RCASPPEIPK 569
G +IK H +F +W I R P IPK
Sbjct: 286 NGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 178
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 208 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 268 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 326 IYQRKVEAPFIPK 338
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +I H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIA 305
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 150
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 180 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 240 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 297
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 298 IYQRKVEAPFIPK 310
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV 191
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIF 480
KP+N M +Q + A+ R+ GT EYLAPEII +G+ AVDWW G+
Sbjct: 168 KPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 481 LYELLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CR 539
+YE+ G PF + +V +RFP S +DL++ LL + R +
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLK 285
Query: 540 RGATEIKQHPFFQGVNWALI--RCASPPEIPK 569
G +IK H +F +W I R P IPK
Sbjct: 286 NGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 143
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 177
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ + GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 173 FAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 232
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 233 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 290
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 291 IYQRKVEAPFIPK 303
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIF 480
KP+N M +Q + A+ R+ GT EYLAPEII +G+ AVDWW G+
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 481 LYELLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CR 539
+YE+ G PF + +V +RFP S +DL++ LL + R +
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLK 286
Query: 540 RGATEIKQHPFFQGVNWALI--RCASPPEIPK 569
G +IK H +F +W I R P IPK
Sbjct: 287 NGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIF 480
KP+N M +Q + A+ R+ GT EYLAPEII +G+ AVDWW G+
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 481 LYELLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CR 539
+YE+ G PF + +V +RFP S +DL++ LL + R +
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLK 286
Query: 540 RGATEIKQHPFFQGVNWALI--RCASPPEIPK 569
G +IK H +F +W I R P IPK
Sbjct: 287 NGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIF 480
KP+N M +Q + A+ R+ GT EYLAPEII +G+ AVDWW G+
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 481 LYELLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CR 539
+YE+ G PF + +V +RFP S +DL++ LL + R +
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLK 285
Query: 540 RGATEIKQHPFFQGVNWALI--RCASPPEIPK 569
G +IK H +F +W I R P IPK
Sbjct: 286 NGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K +G G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIF 480
KP+N M +Q + A+ R+ GT EYLAPEII +G+ AVDWW G+
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 481 LYELLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CR 539
+YE+ G PF + +V +RFP S +DL++ LL + R +
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLK 286
Query: 540 RGATEIKQHPFFQGVNWALI--RCASPPEIPK 569
G +IK H +F +W I R P IPK
Sbjct: 287 NGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ F E +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ F E +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ F E +FY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 158
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ F E +FY A+++L EYL
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 150
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 180 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 240 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 297
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 298 IYQRKVEAPFIPK 310
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ F E +FY A+++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 158
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIF 480
KP+N M +Q + A+ R+ GT EYLAPEII +G+ AVDWW G+
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 481 LYELLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CR 539
+YE+ G PF + +V +RFP S +DL++ LL + R +
Sbjct: 229 IYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLK 286
Query: 540 RGATEIKQHPFFQGVNWALI--RCASPPEIPK 569
G +IK H +F +W I R P IPK
Sbjct: 287 NGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 318
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + T ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ PGG++ + R+ G+ F E +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIF 480
KP+N M +Q + A+ R+ GT EYLAPEII +G+ AVDWW G+
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 481 LYELLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CR 539
+YE+ G PF + +V +RFP S +DL++ LL + R +
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLK 285
Query: 540 RGATEIKQHPFFQGVNWALI--RCASPPEIPK 569
G +IK H +F +W I R P IPK
Sbjct: 286 NGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 317
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 144
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ E G+I ++DF + R
Sbjct: 145 HSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV 178
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 174 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 233
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 234 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 291
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 292 IYQRKVEAPFIPK 304
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT E LAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 178
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ + + GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 208 FAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 268 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 326 IYQRKVEAPFIPK 338
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAP II +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +Y++ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF E
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 100/168 (59%), Gaps = 5/168 (2%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
+ HF +L+ +G G G V + + TK +AMK M+K +R ++ E +I+Q
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+HPFL L+ F+ ++ +V++ GGDL Q +F E+ VK ++ E+++AL+
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRY--HLQQNVHFKEETVKLFICELVMALD 129
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTL 377
YL I++RD+KP+N+L+ E GH+ ++DF+++ A+ P + +T+
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA---AMLPRETQITTM 174
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 443 PTNARSMSFVGTHEYLAPEII---KGEGHGSAVDWWTFGIFLYELLFGKTPFK---GSEN 496
P + + GT Y+APE+ KG G+ AVDWW+ G+ YELL G+ P+ + +
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 497 RATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNW 556
+ ++ + +P + S L+K LL P R + ++++ P+ +NW
Sbjct: 226 KEIVHTFETTVVTYPSA--WSQEMVSLLKKLLEPNPDQRFS---QLSDVQNFPYMNDINW 280
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F ++ LG G G V L + T ++AMK++DK + K K++ E+ I Q+++
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +V+E+ PGG++ + R+ G+ FSE +FY A+++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS-HLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 192
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 306 IYQRKVEAPFIPK 318
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 101/178 (56%), Gaps = 9/178 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F++L+ LG G G V+L Y+AMKV+ K + + K++ ER +L + HPF
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ ++ F+ + ++M++ GG+L +L ++ + F KFY AEV LALEYLH
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSK 125
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF-------DLSLRCAVSPTVVKSSTLESEPLRKN 385
I+YRDLKPEN+L+ ++GHI ++DF D++ +P + + ++P K+
Sbjct: 126 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKS 183
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 21/264 (7%)
Query: 298 GDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH----MLGIVYRDLKPENVLVREDGH 353
G +H +R R G+Y++ + +K + L +E+ + ML IV ++R
Sbjct: 20 GRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-----THPFIIR---- 70
Query: 354 IMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEPSCIQPSCIAPTTCFSP 413
M F + + + ++ L S LRK+ + P + C+A S
Sbjct: 71 -MWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRF---PNPVAKFYAAEVCLALEYLHSK 125
Query: 414 RFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVD 473
+ K + + + A+ + GT +Y+APE++ + + ++D
Sbjct: 126 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSID 185
Query: 474 WWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQ 533
WW+FGI +YE+L G TPF S T ++ LRFP P + +DL+ L+ ++
Sbjct: 186 WWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP--PFFNEDVKDLLSRLITRDLS 243
Query: 534 NRLA-CRRGATEIKQHPFFQGVNW 556
RL + G ++K HP+F+ V W
Sbjct: 244 QRLGNLQNGTEDVKNHPWFKEVVW 267
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
HPFL L F+T C VME+ GG+L H R+R F+E+ +FY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
YLH +VYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF ++ ++ + +RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNW 556
P + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW
Sbjct: 225 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
HPFL L F+T C VME+ GG+L H R+R F+E+ +FY AE++ ALE
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 124
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
YLH +VYRD+K EN+++ +DGHI ++DF L
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 156
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF ++ ++ + +RF
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 229
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNW 556
P + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW
Sbjct: 230 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 274
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ F+E +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FAEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
HPFL L F+T C VME+ GG+L H R+R F+E+ +FY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
YLH +VYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF ++ ++ + +RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNW 556
P + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW
Sbjct: 225 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F LK LG G G V L T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
HPFL L F+T C VME+ GG+L H R+R F+E+ +FY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALE 119
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
YLH +VYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF ++ ++ + +RF
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNW 556
P + +S A+ L+ GLL K+P+ RL A E+ +H FF +NW
Sbjct: 225 PRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ F E +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ F E +FY A+++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 178
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 208 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 268 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 326 IYQRKVEAPFIPK 338
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ F E +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 90/148 (60%), Gaps = 3/148 (2%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL-QSLDHP 273
F LK +G G G V L+ + ++A+KV+ K ++ K+K+ +ER +L +++ HP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
FL L+ F+T V+++ GG+L QR+ + F E +FY AE+ AL YLH
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHS 157
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDL 361
L IVYRDLKPEN+L+ GHI+L+DF L
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGL 185
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY-NV 503
N+ + +F GT EYLAPE++ + + VDWW G LYE+L+G PF S N A +Y N+
Sbjct: 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY-SRNTAEMYDNI 251
Query: 504 VGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNW 556
+ +PL+ P ++ SAR L++GLL K+ RL + EIK H FF +NW
Sbjct: 252 LNKPLQL--KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINW 302
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ F E +FY A+++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +K LG G G V L + + ++AMK++DK + K K++ E+ ILQ+++
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
PFL L F+ + +VME+ GG++ + R+ G+ F E +FY A+++L EYL
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS-HLRRIGR-FXEPHARFYAAQIVLTFEYL 152
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
H L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 153 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 186
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRAT 499
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 182 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 241
Query: 500 LYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLA-CRRGATEIKQHPFFQGVNWAL 558
+V +RFP S +DL++ LL + R + G +IK H +F +W
Sbjct: 242 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 299
Query: 559 I--RCASPPEIPK 569
I R P IPK
Sbjct: 300 IYQRKVEAPFIPK 312
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL-Q 268
LG+ F LL+ +G G V L L T +AMKV+ K + + + QTE+ + Q
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
+ +HPFL L++ F+T+ V+E+ GGDL QRQ + E+ +FY AE+ LAL
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 134
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
YLH GI+YRDLK +NVL+ +GHI L+D+ +
Sbjct: 135 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 167
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 73/120 (60%), Gaps = 13/120 (10%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFK---GSEN-----RATLYN 502
F GT Y+APEI++GE +G +VDWW G+ ++E++ G++PF S+N L+
Sbjct: 181 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 240
Query: 503 VV-GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLAC--RRGATEIKQHPFFQGVNWALI 559
V+ + +R P S +S A ++K L K+P+ RL C + G +I+ HPFF+ V+W ++
Sbjct: 241 VILEKQIRIPRS--MSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMM 298
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F LK LG G G V L + T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
HPFL L F+T C VME+ GG+L H R+R FSE +FY AE++ AL+
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 123
Query: 330 YLHM-LGIVYRDLKPENVLVREDGHIMLSDFDL 361
YLH +VYRDLK EN+++ +DGHI ++DF L
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF ++ ++ + +RF
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRL-ACRRGATEIKQHPFFQGVNWALI--RCASPPEI 567
P + + A+ L+ GLL K+P+ RL A EI QH FF G+ W + + SPP
Sbjct: 230 PRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 287
Query: 568 PK 569
P+
Sbjct: 288 PQ 289
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F LK LG G G V L + T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
HPFL L F+T C VME+ GG+L H R+R FSE +FY AE++ AL+
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 124
Query: 330 YLHM-LGIVYRDLKPENVLVREDGHIMLSDFDL 361
YLH +VYRDLK EN+++ +DGHI ++DF L
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 157
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF ++ ++ + +RF
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRL-ACRRGATEIKQHPFFQGVNWALI--RCASPPEI 567
P + + A+ L+ GLL K+P+ RL A EI QH FF G+ W + + SPP
Sbjct: 231 PRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 288
Query: 568 PK 569
P+
Sbjct: 289 PQ 290
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL-Q 268
LG+ F LL+ +G G V L L T +AMKV+ K + + + QTE+ + Q
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
+ +HPFL L++ F+T+ V+E+ GGDL QRQ + E+ +FY AE+ LAL
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 119
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
YLH GI+YRDLK +NVL+ +GHI L+D+
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 150
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 73/120 (60%), Gaps = 13/120 (10%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFK---GSEN-----RATLYN 502
F GT Y+APEI++GE +G +VDWW G+ ++E++ G++PF S+N L+
Sbjct: 166 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 225
Query: 503 VV-GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLAC--RRGATEIKQHPFFQGVNWALI 559
V+ + +R P S +S A ++K L K+P+ RL C + G +I+ HPFF+ V+W ++
Sbjct: 226 VILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 283
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL-Q 268
LG+ F LL+ +G G V L L T +AM+V+ K + + + QTE+ + Q
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
+ +HPFL L++ F+T+ V+E+ GGDL QRQ + E+ +FY AE+ LAL
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 166
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
YLH GI+YRDLK +NVL+ +GHI L+D+ +
Sbjct: 167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 74/121 (61%), Gaps = 13/121 (10%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFK---GSEN-----RATLY 501
+F GT Y+APEI++GE +G +VDWW G+ ++E++ G++PF S+N L+
Sbjct: 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 271
Query: 502 NVV-GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLAC--RRGATEIKQHPFFQGVNWAL 558
V+ + +R P S +S A ++K L K+P+ RL C + G +I+ HPFF+ V+W +
Sbjct: 272 QVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDM 329
Query: 559 I 559
+
Sbjct: 330 M 330
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F LK LG G G V L + T Y+AMK++ K + + ++ TE +LQ+
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
HPFL L F+T C VME+ GG+L H R+R FSE +FY AE++ AL+
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALD 122
Query: 330 YLHM-LGIVYRDLKPENVLVREDGHIMLSDFDL 361
YLH +VYRDLK EN+++ +DGHI ++DF L
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 155
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT EYLAPE+++ +G AVDWW G+ +YE++ G+ PF ++ ++ + +RF
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRL-ACRRGATEIKQHPFFQGVNWALI--RCASPPEI 567
P + + A+ L+ GLL K+P+ RL A EI QH FF G+ W + + SPP
Sbjct: 229 PRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 286
Query: 568 PK 569
P+
Sbjct: 287 PQ 288
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL-Q 268
LG+ F LL+ +G G V L L T +AMKV+ K + + + QTE+ + Q
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
+ +HPFL L++ F+T+ V+E+ GGDL QRQ + E+ +FY AE+ LAL
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 123
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
YLH GI+YRDLK +NVL+ +GHI L+D+
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 154
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 73/120 (60%), Gaps = 13/120 (10%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFK---GSEN-----RATLYN 502
F GT Y+APEI++GE +G +VDWW G+ ++E++ G++PF S+N L+
Sbjct: 170 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 229
Query: 503 VV-GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLAC--RRGATEIKQHPFFQGVNWALI 559
V+ + +R P S +S A ++K L K+P+ RL C + G +I+ HPFF+ V+W ++
Sbjct: 230 VILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 287
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 106/182 (58%), Gaps = 1/182 (0%)
Query: 190 HKANDAQWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKA 249
+ A+ QW VR+K+ L F +LK +G G V + ++ T +AMK+M+K
Sbjct: 38 YVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW 97
Query: 250 SLEKRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPG 309
+ KR ++ + ER++L + D ++ L+ F+ + + LVME+ GGDL TL + G
Sbjct: 98 DMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKF-G 156
Query: 310 KYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSP 369
+ + +FY+AE+++A++ +H LG V+RD+KP+N+L+ GHI L+DF L+
Sbjct: 157 ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216
Query: 370 TV 371
TV
Sbjct: 217 TV 218
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSA-------VDWWTFGIFLYELLFGKTPFKGSENR 497
RS+ VGT +YL+PEI++ G G DWW G+F YE+ +G+TPF
Sbjct: 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA 276
Query: 498 ATLYNVVG--QPLRFP-ESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
T +V + L P V ARD I+ LL P+ RL R GA + + HPFF G+
Sbjct: 277 ETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLG-RGGAGDFRTHPFFFGL 334
Query: 555 NWALIRCASPPEIP 568
+W +R + PP P
Sbjct: 335 DWDGLRDSVPPFTP 348
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 90/151 (59%), Gaps = 6/151 (3%)
Query: 215 FRLLKKLGCGDIGSVY-LSELTG--TKCYFAMKVMDKASLEKR-KKLLRAQTEREILQSL 270
F LL+ LG G G V+ + ++TG T FAMKV+ KA + + K + ER IL+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
HPF+ L F+T L++E+ GG+L +R+ F E FY+AE+ +AL +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGH 136
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
LH GI+YRDLKPEN+++ GH+ L+DF L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+F GT EY+APEI+ GH AVDWW+ G +Y++L G PF G + T+ ++ L
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 510 FPESPVVSFSARDLIKGLLVKEPQNRLACRRG-ATEIKQHPFFQGVNWA--LIRCASPPE 566
P P ++ ARDL+K LL + +RL G A E++ HPFF+ +NW L R PP
Sbjct: 240 LP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPF 297
Query: 567 IP 568
P
Sbjct: 298 KP 299
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 90/151 (59%), Gaps = 6/151 (3%)
Query: 215 FRLLKKLGCGDIGSVY-LSELTG--TKCYFAMKVMDKASLEKR-KKLLRAQTEREILQSL 270
F LL+ LG G G V+ + ++TG T FAMKV+ KA + + K + ER IL+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
HPF+ L F+T L++E+ GG+L +R+ F E FY+AE+ +AL +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGH 136
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
LH GI+YRDLKPEN+++ GH+ L+DF L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT EY+APEI+ GH AVDWW+ G +Y++L G PF G + T+ ++ L
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRG-ATEIKQHPFFQGVNWA--LIRCASPPEI 567
P P ++ ARDL+K LL + +RL G A E++ HPFF+ +NW L R PP
Sbjct: 241 P--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298
Query: 568 P 568
P
Sbjct: 299 P 299
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 101/179 (56%), Gaps = 1/179 (0%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
+W +VK L F +LK +G G G V + +L FAMK+++K + KR
Sbjct: 57 EWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRA 116
Query: 256 KLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQ 315
+ + ER++L + D ++ TL+ F+ D LVM++ GGDL TL + + E+
Sbjct: 117 ETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEE 175
Query: 316 AVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKS 374
+FY+AE+++A++ +H L V+RD+KP+N+L+ +GHI L+DF L+ TV S
Sbjct: 176 MARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS 234
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 78/138 (56%), Gaps = 10/138 (7%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIK----GEG-HGSAVDWWTFGIFLYELLFGKTPFKGS 494
+ E +S VGT +Y++PEI++ G+G +G DWW+ G+ +YE+L+G+TPF
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 495 ENRATLYNVVGQPLRF---PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
T ++ RF + VS +A+DLI+ L+ ++RL + G + K+HPFF
Sbjct: 285 SLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR-EHRLG-QNGIEDFKKHPFF 342
Query: 552 QGVNWALIRCASPPEIPK 569
G++W IR P IP+
Sbjct: 343 SGIDWDNIRNCEAPYIPE 360
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA 244
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 245 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 560 RCASPPEI 567
+PP++
Sbjct: 303 HQQTPPKL 310
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQ- 268
LG+ +F ++ LG G G V L+ + T +A+KV+ K + + + TE+ IL
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
+ +HPFL L+ F+T VMEF GGDL + Q + F E +FY AE++ AL
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISAL 137
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
+LH GI+YRDLK +NVL+ +GH L+DF + + + V ++ +
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMC-KEGICNGVTTAT------------F 184
Query: 389 CVQPACIEPSCIQPSCIAPTT 409
C P I P +Q P
Sbjct: 185 CGTPDYIAPEILQEMLYGPAV 205
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 8/127 (6%)
Query: 448 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYN-VVGQ 506
+ +F GT +Y+APEI++ +G AVDWW G+ LYE+L G PF+ +EN L+ ++
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE-AENEDDLFEAILND 239
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNRLA--CRRGATEIKQHPFFQGVNWALI--RCA 562
+ +P + A ++K + K P RL + G I +HPFF+ ++WA + R
Sbjct: 240 EVVYPTW--LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQI 297
Query: 563 SPPEIPK 569
PP P+
Sbjct: 298 EPPFRPR 304
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDF 177
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ SFVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 186 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 246 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
Query: 560 RCASPPEI 567
+PP++
Sbjct: 304 HQQTPPKL 311
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDF 179
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 188 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 247
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FP + ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 248 KIIKLEYDFPAAFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 305
Query: 560 RCASPPEI 567
+PP++
Sbjct: 306 HQQTPPKL 313
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDF 177
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 186 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 246 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
Query: 560 RCASPPEI 567
+PP++
Sbjct: 304 HQQTPPKL 311
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA 244
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 245 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 560 RCASPPEI 567
+PP++
Sbjct: 303 HQQTPPKL 310
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 245 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 560 RCASPPEI 567
+PP++
Sbjct: 303 HQQTPPKL 310
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ +FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 183 ESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 243 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 560 RCASPPEI 567
+PP++
Sbjct: 301 HQQTPPKL 308
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 245 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 560 RCASPPEI 567
+PP++
Sbjct: 303 HQQTPPKL 310
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 243 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 560 RCASPPEI 567
+PP++
Sbjct: 301 HQQTPPKL 308
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 243 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 560 RCASPPEI 567
+PP++
Sbjct: 301 HQQTPPKL 308
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 245 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 560 RCASPPEI 567
+PP++
Sbjct: 303 HQQTPPKL 310
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDF 153
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 162 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 221
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 222 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 279
Query: 560 RCASPPE 566
+PP+
Sbjct: 280 HQQTPPK 286
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDF 154
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 163 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 222
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 223 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 280
Query: 560 RCASPPEI 567
+PP++
Sbjct: 281 HQQTPPKL 288
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDF 151
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 160 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 219
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 220 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 277
Query: 560 RCASPPEI 567
+PP++
Sbjct: 278 HQQTPPKL 285
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDF 152
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 161 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 220
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 221 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 278
Query: 560 RCASPPEI 567
+PP++
Sbjct: 279 HQQTPPKL 286
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDF 181
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 249
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 250 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 307
Query: 560 RCASPPEI 567
+PP++
Sbjct: 308 HQQTPPKL 315
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDF 158
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 167 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 226
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 227 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 284
Query: 560 RCASPPEI 567
+PP++
Sbjct: 285 HQQTPPKL 292
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDF 173
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ SFVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 182 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 242 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
Query: 560 RCASPPEI 567
+PP++
Sbjct: 300 HQQTPPKL 307
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDF 173
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 182 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 242 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
Query: 560 RCASPPEI 567
+PP++
Sbjct: 300 HQQTPPKL 307
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 19/187 (10%)
Query: 204 RVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTE 263
+++D + + ++K +G G G V L T+ +AMK++ K + KR E
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 264 REILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
R+I+ + P++ L+ F+ D++ +VME+ PGGDL L E+ +FY AE
Sbjct: 120 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAE 176
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSL--------RC--------AV 367
V+LAL+ +H +G ++RD+KP+N+L+ + GH+ L+DF + RC +
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 236
Query: 368 SPTVVKS 374
SP V+KS
Sbjct: 237 SPEVLKS 243
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 452 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ- 506
VGT +Y++PE++K +G +G DWW+ G+FLYE+L G TPF T ++
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 289
Query: 507 -PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWAL--IRCAS 563
L FP+ +S A++LI L + + RL R G EIK+H FF+ WA +R
Sbjct: 290 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 347
Query: 564 PPEIP 568
P +P
Sbjct: 348 APVVP 352
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 19/187 (10%)
Query: 204 RVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTE 263
+++D + + ++K +G G G V L T+ +AMK++ K + KR E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 264 REILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
R+I+ + P++ L+ F+ D++ +VME+ PGGDL L E+ +FY AE
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAE 181
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSL--------RC--------AV 367
V+LAL+ +H +G ++RD+KP+N+L+ + GH+ L+DF + RC +
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 368 SPTVVKS 374
SP V+KS
Sbjct: 242 SPEVLKS 248
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 452 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ- 506
VGT +Y++PE++K +G +G DWW+ G+FLYE+L G TPF T ++
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 507 -PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWAL--IRCAS 563
L FP+ +S A++LI L + + RL R G EIK+H FF+ WA +R
Sbjct: 295 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 352
Query: 564 PPEIP 568
P +P
Sbjct: 353 APVVP 357
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 143/339 (42%), Gaps = 92/339 (27%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G V L+E T+ A+K + K +LE ++ + + E +L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSM--ENEIAVLHKIKHPNIVALDD 83
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
+E+ L+M+ GG+L R + G +++E+ + +VL A++YLH LGIV+RD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFD-RIVEKG-FYTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 341 LKPENVL---VREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEP 397
LKPEN+L + ED IM+SDF L S +E
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGL-------------SKMED------------------ 170
Query: 398 SCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSMSFVGTHEY 457
P + T C +P + + AQKP
Sbjct: 171 ----PGSVLSTACGTPGYVAPEVLAQKP-------------------------------- 194
Query: 458 LAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPESPV-- 515
+ AVD W+ G+ Y LL G PF EN A L+ + + +SP
Sbjct: 195 ----------YSKAVDCWSIGVIAYILLCGYPPFY-DENDAKLFEQILKAEYEFDSPYWD 243
Query: 516 -VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQG 553
+S SA+D I+ L+ K+P+ R C + QHP+ G
Sbjct: 244 DISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G + L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G+L L+ + F E +FY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 243 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 560 RCASPPEI 567
+PP++
Sbjct: 301 HQQTPPKL 308
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ K LG G +V L+ T +A+K+++K + K K+ ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY F+ D+ + + G L L+ + F E +FY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 442 EPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
E AR+ SFVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 185 ESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 502 NVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR--RGATEIKQHPFFQGVNWALI 559
++ FPE ARDL++ LLV + RL C G +K HPFF+ V W +
Sbjct: 245 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 560 RCASPPEI 567
+PP++
Sbjct: 303 HQQTPPKL 310
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 19/187 (10%)
Query: 204 RVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTE 263
+++D + + ++K +G G G V L T+ +AMK++ K + KR E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 264 REILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
R+I+ + P++ L+ F+ D++ +VME+ PGGDL L E+ +FY AE
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAE 181
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSL--------RC--------AV 367
V+LAL+ +H +G ++RD+KP+N+L+ + GH+ L+DF + RC +
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 368 SPTVVKS 374
SP V+KS
Sbjct: 242 SPEVLKS 248
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 452 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ- 506
VGT +Y++PE++K +G +G DWW+ G+FLYE+L G TPF T ++
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 507 -PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWAL--IRCAS 563
L FP+ +S A++LI L + + RL R G EIK+H FF+ WA +R
Sbjct: 295 NSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTV 352
Query: 564 PPEIP 568
P +P
Sbjct: 353 APVVP 357
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 143/339 (42%), Gaps = 92/339 (27%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G V L+E T+ A+K + K +LE ++ + + E +L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM--ENEIAVLHKIKHPNIVALDD 83
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
+E+ L+M+ GG+L R + G +++E+ + +VL A++YLH LGIV+RD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFD-RIVEKG-FYTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 341 LKPENVL---VREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEP 397
LKPEN+L + ED IM+SDF L S +E
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGL-------------SKMED------------------ 170
Query: 398 SCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSMSFVGTHEY 457
P + T C +P + + AQKP
Sbjct: 171 ----PGSVLSTACGTPGYVAPEVLAQKP-------------------------------- 194
Query: 458 LAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPESPV-- 515
+ AVD W+ G+ Y LL G PF EN A L+ + + +SP
Sbjct: 195 ----------YSKAVDCWSIGVIAYILLCGYPPFY-DENDAKLFEQILKAEYEFDSPYWD 243
Query: 516 -VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQG 553
+S SA+D I+ L+ K+P+ R C + QHP+ G
Sbjct: 244 DISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQ- 268
L + F L K LG G G V+L+E T +FA+K + K + + E+ +L
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
+ +HPFL ++ F+T + VME+ GGDL + Q F FY AE++L L
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
++LH GIVYRDLK +N+L+ +DGHI ++DF
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADF 163
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 15/169 (8%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV 504
+A++ F GT +Y+APEI+ G+ + +VDWW+FG+ LYE+L G++PF G + +++
Sbjct: 173 DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 232
Query: 505 GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWALI--RCA 562
+P + A+DL+ L V+EP+ RL R +I+QHP F+ +NW + +
Sbjct: 233 MDNPFYPRW--LEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEI 287
Query: 563 SPPEIPK---PVEIVHSPAPALSTKAKAVAAGNA-----DHNNYLEFDF 603
PP PK P + + L+ K + A A D N + F F
Sbjct: 288 DPPFRPKVKSPFDCSNFDKEFLNEKPRLXFADRALINSMDQNMFRNFXF 336
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 143/339 (42%), Gaps = 92/339 (27%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G V L+E T+ A+K + K +LE ++ + + E +L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM--ENEIAVLHKIKHPNIVALDD 83
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
+E+ L+M+ GG+L R + G +++E+ + +VL A++YLH LGIV+RD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFD-RIVEKG-FYTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 341 LKPENVL---VREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEP 397
LKPEN+L + ED IM+SDF L S +E
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGL-------------SKMED------------------ 170
Query: 398 SCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSMSFVGTHEY 457
P + T C +P + + AQKP
Sbjct: 171 ----PGSVLSTACGTPGYVAPEVLAQKP-------------------------------- 194
Query: 458 LAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPESPV-- 515
+ AVD W+ G+ Y LL G PF EN A L+ + + +SP
Sbjct: 195 ----------YSKAVDCWSIGVIAYILLCGYPPFY-DENDAKLFEQILKAEYEFDSPYWD 243
Query: 516 -VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQG 553
+S SA+D I+ L+ K+P+ R C + QHP+ G
Sbjct: 244 DISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 143/339 (42%), Gaps = 92/339 (27%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G V L+E T+ A+K + K +LE ++ + + E +L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM--ENEIAVLHKIKHPNIVALDD 83
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
+E+ L+M+ GG+L R + G +++E+ + +VL A++YLH LGIV+RD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFD-RIVEKG-FYTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 341 LKPENVL---VREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEP 397
LKPEN+L + ED IM+SDF L S +E
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGL-------------SKMED------------------ 170
Query: 398 SCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSMSFVGTHEY 457
P + T C +P + + AQKP
Sbjct: 171 ----PGSVLSTACGTPGYVAPEVLAQKP-------------------------------- 194
Query: 458 LAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPESPV-- 515
+ AVD W+ G+ Y LL G PF EN A L+ + + +SP
Sbjct: 195 ----------YSKAVDCWSIGVIAYILLCGYPPFY-DENDAKLFEQILKAEYEFDSPYWD 243
Query: 516 -VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQG 553
+S SA+D I+ L+ K+P+ R C + QHP+ G
Sbjct: 244 DISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 87/145 (60%), Gaps = 3/145 (2%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ ++K +G G G V L ++ +AMK++ K + KR ER+I+ + P+
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L+ F+ DK+ +VME+ PGGDL L E+ KFY AEV+LAL+ +H +
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKFYTAEVVLALDAIHSM 193
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
G+++RD+KP+N+L+ + GH+ L+DF
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADF 218
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 10/126 (7%)
Query: 452 VGTHEYLAPEIIKGEG----HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ- 506
VGT +Y++PE++K +G +G DWW+ G+FL+E+L G TPF T ++
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 295
Query: 507 -PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQG--VNWALIRCAS 563
L FPE +S A++LI L + + RL R G EIKQHPFF+ NW IR +
Sbjct: 296 NSLCFPEDAEISKHAKNLICAFLT-DREVRLG-RNGVEEIKQHPFFKNDQWNWDNIRETA 353
Query: 564 PPEIPK 569
P +P+
Sbjct: 354 APVVPE 359
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQ- 268
L + F L K LG G G V+L+E T +FA+K + K + + E+ +L
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
+ +HPFL ++ F+T + VME+ GGDL + Q F FY AE++L L
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
++LH GIVYRDLK +N+L+ +DGHI ++DF
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADF 162
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 15/169 (8%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV 504
+A++ F GT +Y+APEI+ G+ + +VDWW+FG+ LYE+L G++PF G + +++
Sbjct: 172 DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 231
Query: 505 GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWALI--RCA 562
+P + A+DL+ L V+EP+ RL R +I+QHP F+ +NW + +
Sbjct: 232 MDNPFYPRW--LEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEI 286
Query: 563 SPPEIPK---PVEIVHSPAPALSTKAKAVAAGNA-----DHNNYLEFDF 603
PP PK P + + L+ K + A A D N + F F
Sbjct: 287 DPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMFRNFXF 335
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
VK+ L F ++K +G G G V + ++ T+ +AMK+++K + KR + + ER
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++L + D ++ L+ F+ + LVM++ GGDL TL + K E +FY+ E+
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEM 200
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKS 374
+LA++ +H L V+RD+KP+NVL+ +GHI L+DF L+ TV S
Sbjct: 201 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS 250
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 452 VGTHEYLAPEIIK----GEG-HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
VGT +Y++PEI++ G G +G DWW+ G+ +YE+L+G+TPF T ++
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312
Query: 507 PLRF---PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWALIRCAS 563
RF VS A+DLI+ L+ + R + G + K+H FF+G+NW IR
Sbjct: 313 EERFQFPSHVTDVSEEAKDLIQRLIC--SRERRLGQNGIEDFKKHAFFEGLNWENIRNLE 370
Query: 564 PPEIP 568
P IP
Sbjct: 371 APYIP 375
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
VK+ L F ++K +G G G V + ++ T+ +AMK+++K + KR + + ER
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++L + D ++ L+ F+ + LVM++ GGDL TL + K E +FY+ E+
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEM 184
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKS 374
+LA++ +H L V+RD+KP+NVL+ +GHI L+DF L+ TV S
Sbjct: 185 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS 234
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 452 VGTHEYLAPEIIK----GEG-HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
VGT +Y++PEI++ G G +G DWW+ G+ +YE+L+G+TPF T ++
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 507 PLRF---PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWALIRCAS 563
RF VS A+DLI+ L+ + R + G + K+H FF+G+NW IR
Sbjct: 297 EERFQFPSHVTDVSEEAKDLIQRLICS--RERRLGQNGIEDFKKHAFFEGLNWENIRNLE 354
Query: 564 PPEIP 568
P IP
Sbjct: 355 APYIP 359
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP- 273
F L LG G G V L++ GT+ +A+K++ K + + + E+ +L LD P
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
FL L++ F+T VME+ GGDL +Q GK+ QAV FY AE+ + L +LH
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDL-MYHIQQVGKFKEPQAV-FYAAEISIGLFFLHK 138
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDL 361
GI+YRDLK +NV++ +GHI ++DF +
Sbjct: 139 RGIIYRDLKLDNVMLDSEGHIKIADFGM 166
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
F GT +Y+APEII + +G +VDWW +G+ LYE+L G+ PF G + +++ +
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS 238
Query: 510 FPESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNWALI--RCASPPE 566
+P+S +S A + KGL+ K P RL C G ++++H FF+ ++W + R PP
Sbjct: 239 YPKS--LSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPF 296
Query: 567 IPK 569
PK
Sbjct: 297 KPK 299
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT +Y+APEII + +G +VDWW FG+ LYE+L G+ PF+G + +++ + +
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNWALI--RCASPPEI 567
P+S +S A + KGL+ K P RL C G +IK+H FF+ ++W + + PP
Sbjct: 562 PKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 619
Query: 568 PK 569
PK
Sbjct: 620 PK 621
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP- 273
F L LG G G V LSE GT +A+K++ K + + + E+ +L P
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
FL L++ F+T VME+ GGDL +Q G++ AV FY AE+ + L +L
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGRFKEPHAV-FYAAEIAIGLFFLQS 460
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDL 361
GI+YRDLK +NV++ +GHI ++DF +
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGM 488
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT +Y+APEII + +G +VDWW FG+ LYE+L G+ PF+G + +++ + +
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNWALI--RCASPPEI 567
P+S +S A + KGL+ K P RL C G +IK+H FF+ ++W + + PP
Sbjct: 241 PKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 298
Query: 568 PK 569
PK
Sbjct: 299 PK 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP- 273
F L LG G G V LSE GT +A+K++ K + + + E+ +L P
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
FL L++ F+T VME+ GGDL +Q G++ AV FY AE+ + L +L
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGRFKEPHAV-FYAAEIAIGLFFLQS 139
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDL 361
GI+YRDLK +NV++ +GHI ++DF +
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGM 167
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
QW+ ++ + L + F + + +G G G VY T +AMK +DK ++ ++
Sbjct: 175 QWKNVEL----NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ 230
Query: 256 KLLRAQTEREILQSL---DHPFLPTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKY 311
A ER +L + D PF+ + F T DK S +++ GGDLH Q G
Sbjct: 231 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHG-V 287
Query: 312 FSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
FSE ++FY AE++L LE++H +VYRDLKP N+L+ E GH+ +S DL L C S
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 342
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 21/165 (12%)
Query: 452 VGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE-------NRATLYNV 503
VGTH Y+APE++ KG + S+ DW++ G L++LL G +PF+ + +R TL
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 409
Query: 504 VGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNWALIRCA 562
V P F SP R L++GLL ++ RL C RGA E+K+ PFF+ ++W ++
Sbjct: 410 VELPDSF--SP----ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 463
Query: 563 S--PPEIPKPVEIVHSPAPALST----KAKAVAAGNADHNNYLEF 601
PP IP E+ + A + + K + ++D Y F
Sbjct: 464 KYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNF 508
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
QW+ ++ + L + F + + +G G G VY T +AMK +DK ++ ++
Sbjct: 176 QWKNVEL----NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ 231
Query: 256 KLLRAQTEREILQSL---DHPFLPTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKY 311
A ER +L + D PF+ + F T DK S +++ GGDLH Q G
Sbjct: 232 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHG-V 288
Query: 312 FSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
FSE ++FY AE++L LE++H +VYRDLKP N+L+ E GH+ +S DL L C S
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 21/165 (12%)
Query: 452 VGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE-------NRATLYNV 503
VGTH Y+APE++ KG + S+ DW++ G L++LL G +PF+ + +R TL
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 504 VGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNWALIRCA 562
V P F SP R L++GLL ++ RL C RGA E+K+ PFF+ ++W ++
Sbjct: 411 VELPDSF--SP----ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 563 S--PPEIPKPVEIVHSPAPALST----KAKAVAAGNADHNNYLEF 601
PP IP E+ + A + + K + ++D Y F
Sbjct: 465 KYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNF 509
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
QW+ ++ + L + F + + +G G G VY T +AMK +DK ++ ++
Sbjct: 176 QWKNVEL----NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ 231
Query: 256 KLLRAQTEREILQSL---DHPFLPTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKY 311
A ER +L + D PF+ + F T DK S +++ GGDLH Q G
Sbjct: 232 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHG-V 288
Query: 312 FSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
FSE ++FY AE++L LE++H +VYRDLKP N+L+ E GH+ +S DL L C S
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 21/165 (12%)
Query: 452 VGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE-------NRATLYNV 503
VGTH Y+APE++ KG + S+ DW++ G L++LL G +PF+ + +R TL
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 504 VGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNWALIRCA 562
V P F SP R L++GLL ++ RL C RGA E+K+ PFF+ ++W ++
Sbjct: 411 VELPDSF--SP----ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 563 S--PPEIPKPVEIVHSPAPALST----KAKAVAAGNADHNNYLEF 601
PP IP E+ + A + + K + ++D Y F
Sbjct: 465 KYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNF 509
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
QW+ ++ + L + F + + +G G G VY T +AMK +DK ++ ++
Sbjct: 176 QWKNVEL----NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ 231
Query: 256 KLLRAQTEREILQSL---DHPFLPTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKY 311
A ER +L + D PF+ + F T DK S +++ GGDLH Q G
Sbjct: 232 GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLH-YHLSQHG-V 288
Query: 312 FSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
FSE ++FY AE++L LE++H +VYRDLKP N+L+ E GH+ +S DL L C S
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 21/165 (12%)
Query: 452 VGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE-------NRATLYNV 503
VGTH Y+APE++ KG + S+ DW++ G L++LL G +PF+ + +R TL
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 504 VGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACR-RGATEIKQHPFFQGVNWALIRCA 562
V P F SP R L++GLL ++ RL C RGA E+K+ PFF+ ++W ++
Sbjct: 411 VELPDSF--SP----ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 563 S--PPEIPKPVEIVHSPAPALST----KAKAVAAGNADHNNYLEF 601
PP IP E+ + A + + K + ++D Y F
Sbjct: 465 KYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNF 509
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 200
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S S S TL+ P
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLP 175
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 128 KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLP 174
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 111/233 (47%), Gaps = 13/233 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
FR + LG G G V ++ T +A K ++K ++KRK A E++IL+ ++ F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ +L +ET CLV+ GGDL H Q G F E FY AE+ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH 303
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTV---VKSSTLESEPLRKNPVYC 389
IVYRDLKPEN+L+ + GHI +SD L++ T+ V + + + KN Y
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 363
Query: 390 VQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAE 442
P C+ IA + F R K + + E+ V +PE +E
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQQR------KKKIKREEVERLVKEVPEEYSE 410
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
VGT Y+APE++K E + + DWW G LYE++ G++PF+ + + V P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 512 ESPVVSFS--ARDLIKGLLVKEPQNRLACRRG-ATEIKQHPFFQGVNWALIRCA--SPPE 566
E FS AR L LL K+P RL CR G A E+K+HP F+ +N+ + PP
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 567 IPKPVEIVHSPAPALS--TKAKAVAAGNADHNNYLEF 601
P P I + + K V D + Y +F
Sbjct: 466 KPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKF 502
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 144
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 145 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 191
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 179
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 202 AVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQ 261
A+ K + F + + LG G G+VYL+ +K A+KV+ KA LEK + +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 262 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYV 321
E EI L HP + LY +F L++E+ P G+++ ++ Q F EQ Y+
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKFDEQRTATYI 119
Query: 322 AEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
E+ AL Y H +++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 179
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV 504
++R + GT +YL PE+I+G H VD W+ G+ YE L GK PF+ + + T +
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 505 GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
FP+ V+ ARDLI LL P R R E+ +HP+
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 265
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLP 177
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 115/242 (47%), Gaps = 13/242 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
FR + LG G G V ++ T +A K ++K ++KRK A E++IL+ ++ F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ +L +ET CLV+ GGDL H Q G F E FY AE+ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH 303
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTV---VKSSTLESEPLRKNPVYC 389
IVYRDLKPEN+L+ + GHI +SD L++ T+ V + + + KN Y
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 363
Query: 390 VQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSM 449
P C+ IA + F R K + + E+ V +PE +E + ++
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQQR------KKKIKREEVERLVKEVPEEYSERFSPQAR 417
Query: 450 SF 451
S
Sbjct: 418 SL 419
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
VGT Y+APE++K E + + DWW G LYE++ G++PF+ + + V P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 512 ESPVVSFS--ARDLIKGLLVKEPQNRLACRRG-ATEIKQHPFFQGVNWALIRCA--SPPE 566
E FS AR L LL K+P RL CR G A E+K+HP F+ +N+ + PP
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 567 IPKPVEIVHSPAPALS--TKAKAVAAGNADHNNYLEF 601
P P I + + K V D + Y +F
Sbjct: 466 KPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKF 502
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 174
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 2/180 (1%)
Query: 202 AVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQ 261
A+ K + F + + LG G G+VYL+ +K A+KV+ KA LEK + +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 262 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYV 321
E EI L HP + LY +F L++E+ P G ++ R+ Q F EQ Y+
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYI 119
Query: 322 AEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
E+ AL Y H +++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 179
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G+++ ++ Q F EQ Y+ E+ AL Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLP 179
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV 504
++R GT +YL PE+I+G H VD W+ G+ YE L GK PF+ + + T +
Sbjct: 165 SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 505 GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
FP+ V+ ARDLI LL P R R E+ +HP+
Sbjct: 225 RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 265
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 177
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 131
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 132 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 178
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLP 174
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 126
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 127 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 173
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
QW+ ++A +G F + LG G G V+ ++ T +A K ++K L+KRK
Sbjct: 173 QWKWLEA-----QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRK 227
Query: 256 KLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HTLRQRQPGKY 311
A E++IL + F+ +L FET CLVM GGD+ + + + PG
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-- 285
Query: 312 FSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTV 371
F E FY A+++ LE+LH I+YRDLKPENVL+ +DG++ +SD L++ T
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 372 VK 373
K
Sbjct: 346 TK 347
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGS----ENRATLYN 502
++ + GT ++APE++ GE + +VD++ G+ LYE++ + PF+ EN+
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 503 VVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATE-IKQHPFFQGVNWALIRC 561
V+ Q + +P+ S +++D + LL K+P+ RL R G+ + ++ HP F+ ++W +
Sbjct: 405 VLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 562 A--SPPEIPKPVEIVH---SPAPALSTKAKAVAAGNADHNNYLEF 601
+PP +P + A ST K VA AD + EF
Sbjct: 463 GMLTPPFVPDSRTVYAKNIQDVGAFST-VKGVAFEKADTEFFQEF 506
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLP 176
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLP 174
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
+++RD+KPEN+L+ G + ++DF S+ S
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 187
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLP 174
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
QW+ ++A +G F + LG G G V+ ++ T +A K ++K L+KRK
Sbjct: 173 QWKWLEA-----QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRK 227
Query: 256 KLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HTLRQRQPGKY 311
A E++IL + F+ +L FET CLVM GGD+ + + + PG
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-- 285
Query: 312 FSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTV 371
F E FY A+++ LE+LH I+YRDLKPENVL+ +DG++ +SD L++ T
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 372 VK 373
K
Sbjct: 346 TK 347
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGS----ENRATLYN 502
++ + GT ++APE++ GE + +VD++ G+ LYE++ + PF+ EN+
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 503 VVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATE-IKQHPFFQGVNWALIRC 561
V+ Q + +P+ S +++D + LL K+P+ RL R G+ + ++ HP F+ ++W +
Sbjct: 405 VLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 562 A--SPPEIPKPVEIVH---SPAPALSTKAKAVAAGNADHNNYLEF 601
+PP +P + A ST K VA AD + EF
Sbjct: 463 GMLTPPFVPDSRTVYAKNIQDVGAFST-VKGVAFEKADTEFFQEF 506
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
QW+ ++A +G F + LG G G V+ ++ T +A K ++K L+KRK
Sbjct: 173 QWKWLEA-----QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRK 227
Query: 256 KLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HTLRQRQPGKY 311
A E++IL + F+ +L FET CLVM GGD+ + + + PG
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-- 285
Query: 312 FSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTV 371
F E FY A+++ LE+LH I+YRDLKPENVL+ +DG++ +SD L++ T
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 372 VK 373
K
Sbjct: 346 TK 347
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGS----ENRATLYN 502
++ + GT ++APE++ GE + +VD++ G+ LYE++ + PF+ EN+
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 503 VVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATE-IKQHPFFQGVNWALIRC 561
V+ Q + +P+ S +++D + LL K+P+ RL R G+ + ++ HP F+ ++W +
Sbjct: 405 VLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 562 A--SPPEIPKPVEIVH---SPAPALSTKAKAVAAGNADHNNYLEF 601
+PP +P + A ST K VA AD + EF
Sbjct: 463 GMLTPPFVPDSRTVYAKNIQDVGAFST-VKGVAFEKADTEFFQEF 506
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 177
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
QW+ ++A +G F + LG G G V+ ++ T +A K ++K L+KRK
Sbjct: 173 QWKWLEA-----QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRK 227
Query: 256 KLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HTLRQRQPGKY 311
A E++IL + F+ +L FET CLVM GGD+ + + + PG
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-- 285
Query: 312 FSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTV 371
F E FY A+++ LE+LH I+YRDLKPENVL+ +DG++ +SD L++ T
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 372 VK 373
K
Sbjct: 346 TK 347
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGS----ENRATLYN 502
++ + GT ++APE++ GE + +VD++ G+ LYE++ + PF+ EN+
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 503 VVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATE-IKQHPFFQGVNWALIRC 561
V+ Q + +P+ S +++D + LL K+P+ RL R G+ + ++ HP F+ ++W +
Sbjct: 405 VLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 562 A--SPPEIPKPVEIVH---SPAPALSTKAKAVAAGNADHNNYLEF 601
+PP +P + A ST K VA AD + EF
Sbjct: 463 GMLTPPFVPDSRTVYAKCIQDVGAFST-VKGVAFEKADTEFFQEF 506
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 179
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLP 175
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 175
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLP 174
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 174
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 174
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + +++F S+ S TL+ P
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLP 176
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ K LEK + + E EI L HP
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ +G + ++DF S+ S TL+ P
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLP 178
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLP 177
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ K A+KV+ KA LEK + + E EI L HP
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 124
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 125 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 171
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F +++ LG G G+VYL+ K A+KV+ K+ LEK + + E EI L
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + +Y +F K L++EF P G+L+ ++ Q F EQ ++ E+ AL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEELADALHYC 130
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSL 363
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSV 162
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R GT +YL PE+I+G+ H VD W G+ YE L G PF + T +V
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQG 553
L+FP P +S ++DLI LL P RL +G E HP+ +
Sbjct: 228 DLKFP--PFLSDGSKDLISKLLRYHPPQRLPL-KGVME---HPWVKA 268
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + +++F S+ S TL+ P
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLP 177
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ KA LEK + + E EI L HP
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ G + ++DF S+ S TL+ P
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLP 177
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + + LG G G+VYL+ +K A+KV+ K LEK + + E EI L HP
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ LY +F L++E+ P G ++ R+ Q F EQ Y+ E+ AL Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+++RD+KPEN+L+ +G + ++DF S+ S TL+ P
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLP 178
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F + + LG G G+VYL+ K A+KV+ K+ LEK + + E EI L
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + +Y +F K L++EF P G+L+ ++ Q F EQ ++ E+ AL Y
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEELADALHYC 131
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSL 363
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSV 163
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R GT +YL PE+I+G+ H VD W G+ YE L G PF + T +V
Sbjct: 169 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 228
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQG 553
L+FP P +S ++DLI LL P RL +G E HP+ +
Sbjct: 229 DLKFP--PFLSDGSKDLISKLLRYHPPQRLPL-KGVME---HPWVKA 269
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F + + LG G G+VYL+ K A+KV+ K+ LEK + + E EI L
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + +Y +F K L++EF P G+L+ ++ Q F EQ ++ E+ AL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEELADALHYC 130
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSL 363
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSV 162
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R GT +YL PE+I+G+ H VD W G+ YE L G PF + T +V
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQG 553
L+FP P +S ++DLI LL P RL +G E HP+ +
Sbjct: 228 DLKFP--PFLSDGSKDLISKLLRYHPPQRLPL-KGVME---HPWVKA 268
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 16/184 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F++ LG G VY +E T A+K++DK ++ K + R Q E +I L HP
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLH-TLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ LY +FE + LV+E C G+++ L+ R K FSE + ++ +++ + YLH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHS 130
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPA 393
GI++RDL N+L+ + +I ++DF L+ + + P K+ C P
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM-------------PHEKHYTLCGTPN 177
Query: 394 CIEP 397
I P
Sbjct: 178 YISP 181
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
+ + GT Y++PEI HG D W+ G Y LL G+ PF + TL VV
Sbjct: 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P +S A+DLI LL + P +RL+ + + HPF
Sbjct: 228 DYEMP--SFLSIEAKDLIHQLLRRNPADRLSL----SSVLDHPFM 266
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ ++ LG G G V + T+ +A+KV++KAS K K E E+L+ LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPN 82
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L+ E +V E GG+L + K FSE + +V + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 335 GIVYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQ 391
IV+RDLKPEN+L+ +D I + DF LS
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS----------------------------- 171
Query: 392 PACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSMSF 451
TCF ++ K K+ +G PE++
Sbjct: 172 -----------------TCF--------QQNTKMKDRIGTAYYIAPEVLR---------- 196
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF- 510
GT++ D W+ G+ LY LL G PF G L V F
Sbjct: 197 -GTYD-------------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 511 -PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
P+ +S A+DLI+ +L P R+ AT+ +HP+ Q
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQ 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 133/343 (38%), Gaps = 90/343 (26%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ ++ LG G G V + T+ +A+KV++KAS K K E E+L+ LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPN 82
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L+ E +V E GG+L + K FSE + +V + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 335 GIVYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQ 391
IV+RDLKPEN+L+ +D I + DF LS
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS----------------------------- 171
Query: 392 PACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSMSF 451
TCF ++ K K+ +G PE++
Sbjct: 172 -----------------TCF--------QQNTKMKDRIGTAYYIAPEVLR---------- 196
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF- 510
GT++ D W+ G+ LY LL G PF G L V F
Sbjct: 197 -GTYD-------------EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 511 -PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
P+ +S A+DLI+ +L P R+ AT+ +HP+ Q
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQ 281
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQS 269
+G+++++K LG G G V L+ T T A+K+++K L K ++ + EREI L+
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRL 70
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L HP + LY ++ +V+E+ + QR SEQ + + +++ A+E
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 127
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLKPEN+L+ E ++ ++DF LS
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 160
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 453 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
G+ Y APE+I G+ + G VD W+ G+ LY +L + PF N+ P
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 233
Query: 512 ESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+ +S A LIK +L+ P NR++ EI Q +F+
Sbjct: 234 K--FLSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQS 269
+G+++++K LG G G V L+ T T A+K+++K L K ++ + EREI L+
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRL 69
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L HP + LY ++ +V+E+ + QR SEQ + + +++ A+E
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 126
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLKPEN+L+ E ++ ++DF LS
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 159
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 453 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
G+ Y APE+I G+ + G VD W+ G+ LY +L + PF N+ P
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 232
Query: 512 ESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+ +S A LIK +L+ P NR++ EI Q +F+
Sbjct: 233 K--FLSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFK 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKR--KKLLRAQTEREIL 267
L +G++RLLK +G G+ V L+ T A+K++DK L +KL R E I+
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIM 60
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L+HP + L+ ET+K LVME+ GG++ E KF +++ A
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF--RQIVSA 118
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++Y H IV+RDLK EN+L+ D +I ++DF S
Sbjct: 119 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 153
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNR 535
R P +S +L+K L+ P R
Sbjct: 224 RIP--FYMSTDCENLLKKFLILNPSKR 248
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKR--KKLLRAQTEREILQS 269
+G++RLLK +G G+ V L+ T A+K++DK L +KL R E I++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+HP + L+ ET+K LVME+ GG++ E KF +++ A++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIVSAVQ 127
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLK EN+L+ D +I ++DF S
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNR 535
R P +S +L+K L+ P R
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQS 269
+G+++++K LG G G V L+ T T A+K+++K L K ++ + EREI L+
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRL 60
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L HP + LY ++ +V+E+ + QR SEQ + + +++ A+E
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 117
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLKPEN+L+ E ++ ++DF LS
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 150
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 453 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
G+ Y APE+I G+ + G VD W+ G+ LY +L + PF N+ P
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 223
Query: 512 ESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+ +S A LIK +L+ P NR++ EI Q +F+
Sbjct: 224 K--FLSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQS 269
+G+++++K LG G G V L+ T T A+K+++K L K ++ + EREI L+
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRL 64
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L HP + LY ++ +V+E+ + QR SEQ + + +++ A+E
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 121
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLKPEN+L+ E ++ ++DF LS
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 154
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 453 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
G+ Y APE+I G+ + G VD W+ G+ LY +L + PF N+ P
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 227
Query: 512 ESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+ +S A LIK +L+ P NR++ EI Q +F+
Sbjct: 228 K--FLSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFK 262
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKR--KKLLRAQTEREILQS 269
+G++RLLK +G G+ V L+ T A+K++DK L +KL R E I++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+HP + L+ ET+K LVME+ GG++ E KF +++ A++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIVSAVQ 127
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLK EN+L+ D +I ++DF S
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNR 535
R P +S +L+K L+ P R
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKR--KKLLRAQTEREILQS 269
+G++RLLK +G G+ V L+ T A+K++DK L +KL R E I++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+HP + L+ ET+K LVME+ GG++ E KF +++ A++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIVSAVQ 127
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLK EN+L+ D +I ++DF S
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+F G Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNR 535
R P +S +L+K L+ P R
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKR--KKLLRAQTEREILQS 269
+G++RLLK +G G+ V L+ T A++++DK L +KL R E I++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+HP + L+ ET+K LVME+ GG++ E KF +++ A++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIVSAVQ 127
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLK EN+L+ D +I ++DF S
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 451 FVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+ R
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 510 FPESPVVSFSARDLIKGLLVKEPQNR 535
P +S +L+K L+ P R
Sbjct: 232 IP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKR--KKLLRAQTEREILQS 269
+G++RLLK +G G+ V L+ T A++++DK L +KL R E I++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR---EVRIMKV 69
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+HP + L+ ET+K LVME+ GG++ E KF +++ A++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIVSAVQ 127
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLK EN+L+ D +I ++DF S
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNR 535
R P +S +L+K L+ P R
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLE--KRKKLLRAQTEREILQS 269
+G++RLLK +G G+ V L+ T A+K++DK L +KL R E I++
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR---EVRIMKI 70
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+HP + L+ ET+K L+ME+ GG++ E KF +++ A++
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF--RQIVSAVQ 128
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLK EN+L+ D +I ++DF S
Sbjct: 129 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+F G Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNR 535
R P +S +L+K LV P R
Sbjct: 232 RIP--FYMSTDCENLLKRFLVLNPIKR 256
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLE--KRKKLLRAQTEREILQS 269
+G++RLLK +G G+ V L+ T A+K++DK L +KL R E I++
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR---EVRIMKI 67
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+HP + L+ ET+K L+ME+ GG++ E KF +++ A++
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF--RQIVSAVQ 125
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLK EN+L+ D +I ++DF S
Sbjct: 126 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 158
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 228
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNR 535
R P +S +L+K LV P R
Sbjct: 229 RIP--FYMSTDCENLLKRFLVLNPIKR 253
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 7/151 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + LG G V L+E T FA+K + K +L+ ++ + + E +L+ + H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSI--ENEIAVLRKIKHEN 81
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L +E+ LVM+ GG+L R + G +++E+ + +VL A+ YLH +
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFD-RIVEKG-FYTEKDASTLIRQVLDAVYYLHRM 139
Query: 335 GIVYRDLKPENVLVR---EDGHIMLSDFDLS 362
GIV+RDLKPEN+L E+ IM+SDF LS
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPE 512
GT Y+APE++ + + AVD W+ G+ Y LL G PF EN + L+ + + +
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY-DENDSKLFEQILKAEYEFD 242
Query: 513 SPV---VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQG 553
SP +S SA+D I+ L+ K+P R C + A +HP+ G
Sbjct: 243 SPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAA----RHPWIAG 282
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ ++ +LG G G VY ++ T A KV+D S E+ + + E +IL S DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM---VEIDILASCDHPN 95
Query: 275 LPTLYTHFETDKFSCLVMEFCPGG--DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ L F + +++EFC GG D L +P +E ++ + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCA---------------VSPTVVKSSTL 377
I++RDLK N+L DG I L+DF +S + ++P VV T
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 378 ESEPLR-KNPVYCVQPACIEPSCIQP 402
+ P K V+ + IE + I+P
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEP 238
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 22/119 (18%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEG-----HGSAVDWWTFGIFLYELLFGKTPFKGSENRA 498
T R SF+GT ++APE++ E + D W+ GI L E+ + P
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 499 TLYNV-------VGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF 550
L + + QP R+ S + +D +K L K + R +++ QHPF
Sbjct: 248 VLLKIAKSEPPTLAQPSRW------SSNFKDFLKKCLEK----NVDARWTTSQLLQHPF 296
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ ++ +LG G G VY ++ T A KV+D S E+ + + E +IL S DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM---VEIDILASCDHPN 95
Query: 275 LPTLYTHFETDKFSCLVMEFCPGG--DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ L F + +++EFC GG D L +P +E ++ + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCA---------------VSPTVVKSSTL 377
I++RDLK N+L DG I L+DF +S + ++P VV T
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 378 ESEPLR-KNPVYCVQPACIEPSCIQP 402
+ P K V+ + IE + I+P
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEP 238
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 22/116 (18%)
Query: 447 RSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
R SF+GT ++APE++ K + D W+ GI L E+ + P L
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 502 NV-------VGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF 550
+ + QP R+ S + +D +K L K + R +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRW------SSNFKDFLKKCLEK----NVDARWTTSQLLQHPF 296
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ ++ +LG G G VY ++ T A KV+D S E+ + + E +IL S DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM---VEIDILASCDHPN 95
Query: 275 LPTLYTHFETDKFSCLVMEFCPGG--DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ L F + +++EFC GG D L +P +E ++ + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCA---------------VSPTVVKSSTL 377
I++RDLK N+L DG I L+DF +S + ++P VV T
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 378 ESEPLR-KNPVYCVQPACIEPSCIQP 402
+ P K V+ + IE + I+P
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEP 238
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 22/116 (18%)
Query: 447 RSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
R F+GT ++APE++ K + D W+ GI L E+ + P L
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 502 NV-------VGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF 550
+ + QP R+ S + +D +K L K + R +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRW------SSNFKDFLKKCLEK----NVDARWTTSQLLQHPF 296
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ ++ +LG G G VY ++ T A KV++ S E+ + + E EIL + DHP+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI---VEIEILATCDHPY 77
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L + D +++EFCPGG + + + + +E ++ ++L AL +LH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLR---------------CAVSPTVVKSSTLES 379
I++RDLK NVL+ +G I L+DF +S + ++P VV T++
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 380 EPL-RKNPVYCVQPACIEPSCIQP 402
P K ++ + IE + I+P
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEP 220
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 450 SFVGTHEYLAPEIIKGEG-----HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV 504
SF+GT ++APE++ E + D W+ GI L E+ + P L +
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 235
Query: 505 GQ---PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVN 555
L P V F RD +K L K P+ R A ++ +HPF +
Sbjct: 236 KSDPPTLLTPSKWSVEF--RDFLKIALDKNPET----RPSAAQLLEHPFVSSIT 283
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ ++ +LG G G VY ++ T A KV++ S E+ + + E EIL + DHP+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI---VEIEILATCDHPY 69
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L + D +++EFCPGG + + + + +E ++ ++L AL +LH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLR---------------CAVSPTVVKSSTLES 379
I++RDLK NVL+ +G I L+DF +S + ++P VV T++
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 380 EPL-RKNPVYCVQPACIEPSCIQP 402
P K ++ + IE + I+P
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEP 212
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 450 SFVGTHEYLAPEIIKGEG-----HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV 504
SF+GT ++APE++ E + D W+ GI L E+ + P L +
Sbjct: 168 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 227
Query: 505 GQ---PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVN 555
L P V F RD +K L K P+ R A ++ +HPF +
Sbjct: 228 KSDPPTLLTPSKWSVEF--RDFLKIALDKNPET----RPSAAQLLEHPFVSSIT 275
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLE--KRKKLLRAQTEREILQS 269
+G++RL K +G G+ V L+ T A+K++DK L +KL R E I++
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR---EVRIMKI 70
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+HP + L+ ET+K LVME+ GG++ E KF +++ A++
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIVSAVQ 128
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLK EN+L+ D +I ++DF S
Sbjct: 129 YCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 509 RFP 511
R P
Sbjct: 232 RIP 234
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
++ +KKLG G G V L + T A+K++ K+S+ E +L+ LDHP
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLH---TLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
+ LY FE + LVME GG+L LRQ+ FSE + +VL YL
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTYL 137
Query: 332 HMLGIVYRDLKPENVLVR---EDGHIMLSDFDLS 362
H IV+RDLKPEN+L+ D I + DF LS
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF- 510
+GT Y+APE+++ + + D W+ G+ LY LL G PF G ++ L V F
Sbjct: 184 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 511 -PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P+ VS A+ L+K +L EP R++ A E HP+
Sbjct: 243 PPDWTQVSDEAKQLVKLMLTYEPSKRIS----AEEALNHPWI 280
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 142/344 (41%), Gaps = 85/344 (24%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
++ L + +G G V L+ T A+K+MDK +L L R +TE E L++L H
Sbjct: 11 YYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQ 68
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ LY ET +V+E+CPGG+L Q SE+ + +++ A+ Y+H
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYVHS 126
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPA 393
G +RDLKPEN+L E + L DF L CA +P + N Y +Q
Sbjct: 127 QGYAHRDLKPENLLFDEYHKLKLIDFGL---CA-------------KP-KGNKDYHLQTC 169
Query: 394 CIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSMSFVG 453
C G+ PELI + S++G
Sbjct: 170 C-----------------------------------GSLAYAAPELI------QGKSYLG 188
Query: 454 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPES 513
S D W+ GI LY L+ G PF +N LY + + ++
Sbjct: 189 ----------------SEADVWSMGILLYVLMCGFLPF-DDDNVMALYKKIMRG-KYDVP 230
Query: 514 PVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF-FQGVNW 556
+S S+ L++ +L +P+ R++ + + HP+ Q N+
Sbjct: 231 KWLSPSSILLLQQMLQVDPKKRISMK----NLLNHPWIMQDYNY 270
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDK-----ASLEKRKKLLRAQTEREILQSLDHP 273
K LG G G V L+ T A+K++ K S + L +TE EIL+ L+HP
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ + F+ + + +V+E GG+L + K E K Y ++LLA++YLH
Sbjct: 75 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 334 LGIVYRDLKPENVLV---REDGHIMLSDF 359
GI++RDLKPENVL+ ED I ++DF
Sbjct: 132 NGIIHRDLKPENVLLSSQEEDCLIKITDF 160
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 450 SFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV-- 504
+ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF + +L + +
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 233
Query: 505 GQPLRFPESPV-VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
G+ PE VS A DL+K LLV +P+ R E +HP+ Q
Sbjct: 234 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQ 278
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDK-----ASLEKRKKLLRAQTEREILQSLDHP 273
K LG G G V L+ T A+K++ K S + L +TE EIL+ L+HP
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ + F+ + + +V+E GG+L + K E K Y ++LLA++YLH
Sbjct: 82 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 334 LGIVYRDLKPENVLV---REDGHIMLSDF 359
GI++RDLKPENVL+ ED I ++DF
Sbjct: 139 NGIIHRDLKPENVLLSSQEEDCLIKITDF 167
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 438 ELIAEPTNARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGS 494
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF
Sbjct: 171 KILGETSLMRTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 228
Query: 495 ENRATLYNVV--GQPLRFPESPV-VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
+ +L + + G+ PE VS A DL+K LLV +P+ R E +HP+
Sbjct: 229 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWL 284
Query: 552 Q 552
Q
Sbjct: 285 Q 285
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDK-----ASLEKRKKLLRAQTEREILQSLDHP 273
K LG G G V L+ T A+K++ K S + L +TE EIL+ L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ + F+ + + +V+E GG+L + K E K Y ++LLA++YLH
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 334 LGIVYRDLKPENVLV---REDGHIMLSDF 359
GI++RDLKPENVL+ ED I ++DF
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 450 SFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV-- 504
+ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF + +L + +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 505 GQPLRFPESPV-VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
G+ PE VS A DL+K LLV +P+ R E +HP+ Q
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQ 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDK-----ASLEKRKKLLRAQTEREILQSLDHP 273
K LG G G V L+ T A+K++ K S + L +TE EIL+ L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ + F+ + + +V+E GG+L + K E K Y ++LLA++YLH
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 334 LGIVYRDLKPENVLV---REDGHIMLSDF 359
GI++RDLKPENVL+ ED I ++DF
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 450 SFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV-- 504
+ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF + +L + +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 505 GQPLRFPESPV-VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
G+ PE VS A DL+K LLV +P+ R E +HP+ Q
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQ 279
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKR--KKLLRAQTEREILQS 269
+G++RLLK +G G+ V L+ T A+K++DK L +KL R E I +
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIXKV 69
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+HP + L+ ET+K LV E+ GG++ E KF +++ A++
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF--RQIVSAVQ 127
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y H IV+RDLK EN+L+ D +I ++DF S
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADXNIKIADFGFS 160
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+F G Y APE+ +G+ + G VD W+ G+ LY L+ G PF G + V+
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNR 535
R P S +L+K L+ P R
Sbjct: 231 RIP--FYXSTDCENLLKKFLILNPSKR 255
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDK-----ASLEKRKKLLRAQTEREILQSLDHP 273
K LG G G V L+ T A+K++ K S + L +TE EIL+ L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ + F+ + + +V+E GG+L + K E K Y ++LLA++YLH
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 334 LGIVYRDLKPENVLV---REDGHIMLSDF 359
GI++RDLKPENVL+ ED I ++DF
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 450 SFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV-- 504
+ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF + +L + +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 505 GQPLRFPESPV-VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
G+ PE VS A DL+K LLV +P+ R E +HP+ Q
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQ 279
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
++ +KKLG G G V L + T A+K++ K+S+ E +L+ LDHP
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLH---TLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
+ LY FE + LVME GG+L LRQ+ FSE + +VL YL
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTYL 120
Query: 332 HMLGIVYRDLKPENVLVR---EDGHIMLSDFDLS 362
H IV+RDLKPEN+L+ D I + DF LS
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF- 510
+GT Y+APE+++ + + D W+ G+ LY LL G PF G ++ L V F
Sbjct: 167 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 225
Query: 511 -PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P+ VS A+ L+K +L EP R++ A E HP+
Sbjct: 226 PPDWTQVSDEAKQLVKLMLTYEPSKRIS----AEEALNHPWI 263
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 15/150 (10%)
Query: 221 LGCGDIGSVYL--SELTGTKCYFAMKVMDKASLEKR---KKLLRAQTEREILQSLDHPFL 275
LG G G V L ++TG +C A+KV+ K ++++ + LLR E ++L+ LDHP +
Sbjct: 58 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLR---EVQLLKQLDHPNI 112
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
LY FE + LV E GG+L + K FSE + +VL + Y+H
Sbjct: 113 MKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 336 IVYRDLKPENVLVR---EDGHIMLSDFDLS 362
IV+RDLKPEN+L+ +D +I + DF LS
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLS 200
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF- 510
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ L V F
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 511 -PESPVVSFSARDLIKGLLVKEPQNRLACR 539
P+ VS SA+DLI+ +L P R++ R
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 301
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 15/150 (10%)
Query: 221 LGCGDIGSVYL--SELTGTKCYFAMKVMDKASLEKR---KKLLRAQTEREILQSLDHPFL 275
LG G G V L ++TG +C A+KV+ K ++++ + LLR E ++L+ LDHP +
Sbjct: 57 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLR---EVQLLKQLDHPNI 111
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
LY FE + LV E GG+L + K FSE + +VL + Y+H
Sbjct: 112 MKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 336 IVYRDLKPENVLVR---EDGHIMLSDFDLS 362
IV+RDLKPEN+L+ +D +I + DF LS
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLS 199
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF- 510
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ L V F
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 511 -PESPVVSFSARDLIKGLLVKEPQNRLACR 539
P+ VS SA+DLI+ +L P R++ R
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 300
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
++ L +G G G V ++ GT+ A K + K +E + R + E EI++SLDHP
Sbjct: 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHP 66
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ LY FE + LVME C GG+L + + F E + +VL A+ Y H
Sbjct: 67 NIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 334 LGIVYRDLKPENVLVRE---DGHIMLSDFDLSLR 364
L + +RDLKPEN L D + L DF L+ R
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
VGT Y++P++++G +G D W+ G+ +Y LL G PF + + + FP
Sbjct: 169 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 512 ESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
E ++ S A LI+ LL K P+ R+ + + +H +F+
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQRIT----SLQALEHEWFE 266
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLDHPFL 275
L+K+G G G L + T + +K ++ + + ++ R ++ RE+ L ++ HP +
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE---REESRREVAVLANMKHPNI 85
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
FE + +VM++C GGDL Q G F E + + ++ LAL+++H
Sbjct: 86 VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK 145
Query: 336 IVYRDLKPENVLVREDGHIMLSDF----------DLSLRCAVSPTVVKSSTLESEP 381
I++RD+K +N+ + +DG + L DF +L+ C +P + E++P
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP 201
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
+GT YL+PEI + + + + D W G LYEL K F+ + + ++ P
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-P 244
Query: 512 ESPVVSFSARDLIKGLLVKEPQNR 535
S S+ R L+ L + P++R
Sbjct: 245 VSLHYSYDLRSLVSQLFKRNPRDR 268
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 145/349 (41%), Gaps = 90/349 (25%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSE--LTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
DG + +GH+ L LG G G V + E LTG K A+K++++ + + + + E
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKV--AVKILNRQKIRSLDVVGKIKREI 62
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+ L+ HP + LY T +VME+ GG+L + G+ +A + + ++
Sbjct: 63 QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GRVEEMEARRLF-QQI 120
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRK 384
L A++Y H +V+RDLKPENVL+ + ++DF LS + + E LR
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS-----------NMMSDGEFLR- 168
Query: 385 NPVYCVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPT 444
T+C SP + + PE+I+
Sbjct: 169 -----------------------TSCGSPNYAA-------------------PEVISGRL 186
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY-NV 503
Y PE+ D W+ G+ LY LL G PF E+ TL+ +
Sbjct: 187 ------------YAGPEV----------DIWSCGVILYALLCGTLPFD-DEHVPTLFKKI 223
Query: 504 VGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
G PE ++ S L+ +L +P R + +I++H +F+
Sbjct: 224 RGGVFYIPEY--LNRSVATLLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
++ L +G G G V ++ GT+ A K + K +E + R + E EI++SLDHP
Sbjct: 27 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHP 83
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ LY FE + LVME C GG+L + + F E + +VL A+ Y H
Sbjct: 84 NIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 334 LGIVYRDLKPENVLVRE---DGHIMLSDFDLSLR 364
L + +RDLKPEN L D + L DF L+ R
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 175
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
VGT Y++P++++G +G D W+ G+ +Y LL G PF + + + FP
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 512 ESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
E ++ S A LI+ LL K P+ R+ + + +H +F+
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQRIT----SLQALEHEWFE 283
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDK-----ASLEKRKKLLRAQTEREILQSLDHP 273
K LG G G V L+ T A++++ K S + L +TE EIL+ L+HP
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ + F+ + + +V+E GG+L + K E K Y ++LLA++YLH
Sbjct: 201 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 257
Query: 334 LGIVYRDLKPENVLV---REDGHIMLSDF 359
GI++RDLKPENVL+ ED I ++DF
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDF 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 438 ELIAEPTNARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGS 494
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF
Sbjct: 290 KILGETSLMRTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347
Query: 495 ENRATLYNVV--GQPLRFPESPV-VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
+ +L + + G+ PE VS A DL+K LLV +P+ R E +HP+
Sbjct: 348 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWL 403
Query: 552 Q 552
Q
Sbjct: 404 Q 404
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDK-----ASLEKRKKLLRAQTEREILQSLDHP 273
K LG G G V L+ T A++++ K S + L +TE EIL+ L+HP
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ + F+ + + +V+E GG+L + K E K Y ++LLA++YLH
Sbjct: 215 CIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 334 LGIVYRDLKPENVLV---REDGHIMLSDF 359
GI++RDLKPENVL+ ED I ++DF
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDF 300
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 438 ELIAEPTNARSMSFVGTHEYLAPEI---IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGS 494
+++ E + R++ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF
Sbjct: 304 KILGETSLMRTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 361
Query: 495 ENRATLYNVV--GQPLRFPESPV-VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
+ +L + + G+ PE VS A DL+K LLV +P+ R E +HP+
Sbjct: 362 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWL 417
Query: 552 Q 552
Q
Sbjct: 418 Q 418
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 15/150 (10%)
Query: 221 LGCGDIGSVYL--SELTGTKCYFAMKVMDKASLEKR---KKLLRAQTEREILQSLDHPFL 275
LG G G V L ++TG +C A+KV+ K ++++ + LLR E ++L+ LDHP +
Sbjct: 34 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLR---EVQLLKQLDHPNI 88
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
LY FE + LV E GG+L + K FSE + +VL + Y+H
Sbjct: 89 MKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 336 IVYRDLKPENVLVR---EDGHIMLSDFDLS 362
IV+RDLKPEN+L+ +D +I + DF LS
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF- 510
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ L V F
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 511 -PESPVVSFSARDLIKGLLVKEPQNRLACR 539
P+ VS SA+DLI+ +L P R++ R
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 277
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 15/150 (10%)
Query: 221 LGCGDIGSVYL--SELTGTKCYFAMKVMDKASLEKR---KKLLRAQTEREILQSLDHPFL 275
LG G G V L ++TG +C A+KV+ K ++++ + LLR E ++L+ LDHP +
Sbjct: 40 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLR---EVQLLKQLDHPNI 94
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
LY FE + LV E GG+L + K FSE + +VL + Y+H
Sbjct: 95 MKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 336 IVYRDLKPENVLVR---EDGHIMLSDFDLS 362
IV+RDLKPEN+L+ +D +I + DF LS
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLS 182
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF- 510
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ L V F
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 511 -PESPVVSFSARDLIKGLLVKEPQNRLACR 539
P+ VS SA+DLI+ +L P R++ R
Sbjct: 254 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 283
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 224 GDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYTHFE 283
GD G VY ++ T A KV+D S E+ + + E +IL S DHP + L F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM---VEIDILASCDHPNIVKLLDAFY 77
Query: 284 TDKFSCLVMEFCPGG--DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDL 341
+ +++EFC GG D L +P +E ++ + L AL YLH I++RDL
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLHDNKIIHRDL 134
Query: 342 KPENVLVREDGHIMLSDFDLSLRCA----------------VSPTVVKSSTLESEPL-RK 384
K N+L DG I L+DF +S + ++P VV T + P K
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 194
Query: 385 NPVYCVQPACIEPSCIQP 402
V+ + IE + I+P
Sbjct: 195 ADVWSLGITLIEMAEIEP 212
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 22/116 (18%)
Query: 447 RSMSFVGTHEYLAPEII-----KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLY 501
R SF+GT ++APE++ K + D W+ GI L E+ + P L
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 224
Query: 502 NV-------VGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF 550
+ + QP R+ S + +D +K L K + R +++ QHPF
Sbjct: 225 KIAKSEPPTLAQPSRW------SSNFKDFLKKCLEK----NVDARWTTSQLLQHPF 270
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 15/150 (10%)
Query: 221 LGCGDIGSVYL--SELTGTKCYFAMKVMDKASLEKR---KKLLRAQTEREILQSLDHPFL 275
LG G G V L ++TG +C A+KV+ K ++++ + LLR E ++L+ LDHP +
Sbjct: 34 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLR---EVQLLKQLDHPNI 88
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
LY FE + LV E GG+L + K FSE + +VL + Y H
Sbjct: 89 XKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 336 IVYRDLKPENVLVR---EDGHIMLSDFDLS 362
IV+RDLKPEN+L+ +D +I + DF LS
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF- 510
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ L V F
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 511 -PESPVVSFSARDLIKGLLVKEPQNRLACR 539
P+ VS SA+DLI+ L P R++ R
Sbjct: 248 LPQWKKVSESAKDLIRKXLTYVPSXRISAR 277
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 16/173 (9%)
Query: 203 VRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEK------RKK 256
VR K+G +G +F++ +KLG G G V L + A+KV+ K+ +K K
Sbjct: 27 VRKKEGKIGESYFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKN 85
Query: 257 LLRAQ----TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
+ + E +L+SLDHP + L+ FE K+ LV EF GG+L Q F
Sbjct: 86 IEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRHKF 143
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDG---HIMLSDFDLS 362
E + ++L + YLH IV+RD+KPEN+L+ +I + DF LS
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQP--LR 509
+GT Y+APE++K + + D W+ G+ +Y LL G PF G ++ + V
Sbjct: 209 LGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267
Query: 510 FPESPVVSFSARDLIKGLLVKEPQNR 535
F + +S A++LIK +L + R
Sbjct: 268 FNDWKNISDEAKELIKLMLTYDYNKR 293
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + +LG G VY + GT+ +A+KV+ K KK++R TE +L L HP
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVR--TEIGVLLRLSHPN 109
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L FET LV+E GG+L R + G Y+SE+ V ++L A+ YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFD-RIVEKG-YYSERDAADAVKQILEAVAYLHEN 167
Query: 335 GIVYRDLKPENVLVRE---DGHIMLSDFDLS 362
GIV+RDLKPEN+L D + ++DF LS
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPE 512
GT Y APEI++G +G VD W+ GI Y LL G PF ++ + +
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI 271
Query: 513 SPV---VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQG 553
SP VS +A+DL++ L+V +P+ RL + QHP+ G
Sbjct: 272 SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL----QHPWVTG 311
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 80/158 (50%), Gaps = 20/158 (12%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLE--KRKKLLRAQTEREILQSLDH 272
++ +KKLG G G V L T A+K++ K S+ KLL E +L+ LDH
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE---EVAVLKLLDH 95
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDL-----HTLRQRQPGKYFSEQAVKFYVAEVLLA 327
P + LY FE + LVME GG+L H ++ F+E + +VL
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-------FNEVDAAVIIKQVLSG 148
Query: 328 LEYLHMLGIVYRDLKPENVLV---REDGHIMLSDFDLS 362
+ YLH IV+RDLKPEN+L+ +D I + DF LS
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF- 510
+GT Y+APE+++ + + D W+ G+ L+ LL G PF G ++ L V F
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 511 -PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
PE VS A+DLIK +L + Q R++ ++ +HP+ +
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQAL----EHPWIK 296
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F ++ LG G V+L + T FA+K + K+ + L + E +L+ + H
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSL---ENEIAVLKKIKHEN 67
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ TL +E+ LVM+ GG+L R + G Y +E+ + +VL A++YLH
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFD-RILERGVY-TEKDASLVIQQVLSAVKYLHEN 125
Query: 335 GIVYRDLKPENVLV---REDGHIMLSDFDLS 362
GIV+RDLKPEN+L E+ IM++DF LS
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPE 512
GT Y+APE++ + + AVD W+ G+ Y LL G PF E + L+ + + E
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFY-EETESKLFEKIKEGYYEFE 227
Query: 513 SPV---VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWALIRCASP 564
SP +S SA+D I LL K+P R C + + HP+ G N AL R P
Sbjct: 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALS----HPWIDG-NTALHRDIYP 277
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+ F + + LG G G+VYL+ + A+KV+ K+ +EK + + E EI L
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + LY +F + L++E+ P G+L+ ++ Q F EQ + E+ AL Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELY--KELQKSCTFDEQRTATIMEELADALMYC 139
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSL 363
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFGWSV 171
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R + GT +YL PE+I+G H VD W G+ YELL G PF+ + + T +V
Sbjct: 177 RRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQG 553
L+FP S V A+DLI LL P RL ++ HP+ +
Sbjct: 237 DLKFPAS--VPTGAQDLISKLLRHNPSERLPL----AQVSAHPWVRA 277
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 81/187 (43%), Gaps = 25/187 (13%)
Query: 213 GHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD- 271
G F L++ +G G G VY T A+KVMD + E EI Q ++
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----------VTGDEEEEIKQEINM 73
Query: 272 ------HPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF 319
H + T Y F D LVMEFC G + L + G E+ + +
Sbjct: 74 LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY 133
Query: 320 YVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLES 379
E+L L +LH +++RD+K +NVL+ E+ + L DF +S + TV + +T
Sbjct: 134 ICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIG 191
Query: 380 EPLRKNP 386
P P
Sbjct: 192 TPYWMAP 198
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAV-----DWWTFGIFLYELLFGKTPFKGSENRA 498
T R +F+GT ++APE+I + + A D W+ GI E+ G P
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR 241
Query: 499 TLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
L+ + P +S S + I+ LVK R A ++ +HPF +
Sbjct: 242 ALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATE----QLMKHPFIR 291
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 28/176 (15%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASL-------------------- 251
+ + L ++G G G V L+ Y+AMKV+ K L
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 252 ---EKRKKLLRAQTEREILQSLDHPFLPTLYTHFE--TDKFSCLVMEFCPGGDLHTLRQR 306
+ R + + E IL+ LDHP + L + + +V E G + +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 307 QPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+P SE +FY +++ +EYLH I++RD+KP N+LV EDGHI ++DF +S
Sbjct: 132 KP---LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 452 VGTHEYLAPEII---KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
VGT ++APE + + G A+D W G+ LY +FG+ PF + Q L
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF 550
FP+ P ++ +DLI +L K P++R+ EIK HP+
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRIV----VPEIKLHPW 295
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F +KLG G G V+L E + +K ++K + + + + E E+L+SLDHP
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD--RSQVPMEQIEAEIEVLKSLDHPN 81
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ ++ FE +VME C GG+L + + GK SE V + +++ AL Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 333 MLGIVYRDLKPENVLVREDG-H--IMLSDFDLS 362
+V++DLKPEN+L ++ H I + DF L+
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 34/151 (22%)
Query: 421 KAQKPKNEMGNQVSP----------LPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGS 470
K KP+N + SP L EL ++ S + GT Y+APE+ K +
Sbjct: 148 KDLKPENILFQDTSPHSPIKIIDFGLAELF--KSDEHSTNAAGTALYMAPEVFKRDV-TF 204
Query: 471 AVDWWTFGIFLYELLFGKTPFKGS-----ENRATL----YNVVGQPLRFPESPVVSFSAR 521
D W+ G+ +Y LL G PF G+ + +AT Y V +PL +P A
Sbjct: 205 KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPL----TP----QAV 256
Query: 522 DLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
DL+K +L K+P+ R A ++ H +F+
Sbjct: 257 DLLKQMLTKDPER----RPSAAQVLHHEWFK 283
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 6/158 (3%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSE--LTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
DG + +GH+ L LG G G V + E LTG K A+K++++ + + + + E
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKV--AVKILNRQKIRSLDVVGKIKREI 62
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+ L+ HP + LY T +VME+ GG+L + G+ +A + + ++
Sbjct: 63 QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GRVEEMEARRLF-QQI 120
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L A++Y H +V+RDLKPENVL+ + ++DF LS
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 453 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLY-NVVGQPLRF 510
G+ Y APE+I G + G VD W+ G+ LY LL G PF E+ TL+ + G
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DEHVPTLFKKIRGGVFYI 230
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
PE ++ S L+ +L +P R + +I++H +F+
Sbjct: 231 PEY--LNRSVATLLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G Y TK FA KV+ K+ L K + + TE I +SLD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
FE D F +V+E C L L +R+ K +E ++++ + + ++YLH +++RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 341 LKPENVLVREDGHIMLSDFDLSLR 364
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R GT Y+APE++ +GH VD W+ G LY LL GK PF+ S + T +
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNR 535
P ++ A LI+ +L +P R
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR 284
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G Y TK FA KV+ K+ L K + + TE I +SLD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
FE D F +V+E C L L +R+ K +E ++++ + + ++YLH +++RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 341 LKPENVLVREDGHIMLSDFDLSLR 364
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R + GT Y+APE++ +GH VD W+ G LY LL GK PF+ S + T +
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNR 535
P ++ A LI+ +L +P R
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR 284
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G Y TK FA KV+ K+ L K + + TE I +SLD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
FE D F +V+E C L L +R+ K +E ++++ + + ++YLH +++RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 341 LKPENVLVREDGHIMLSDFDLSLR 364
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R GT Y+APE++ +GH VD W+ G LY LL GK PF+ S + T +
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNR 535
P ++ A LI+ +L +P R
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR 284
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 6/158 (3%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYL--SELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
DG + +GH+ L LG G G V + ELTG K A+K++++ + + + + E
Sbjct: 10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKV--AVKILNRQKIRSLDVVGKIRREI 67
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+ L+ HP + LY T +VME+ GG+L + G+ +++ + + ++
Sbjct: 68 QNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN-GRLDEKESRRLF-QQI 125
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L ++Y H +V+RDLKPENVL+ + ++DF LS
Sbjct: 126 LSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 163
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 453 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
G+ Y APE+I G + G VD W+ G+ LY LL G PF ++ TL+ + + F
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF-DDDHVPTLFKKICDGI-FY 234
Query: 512 ESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
++ S L+K +L +P R + +I++H +F+
Sbjct: 235 TPQYLNPSVISLLKHMLQVDPMKRATIK----DIREHEWFK 271
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
+G + + + LG G G V L+ T+ A+K + + L+K +R + E L+ L
Sbjct: 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + LY T +V+E+ G + ++ K +E + + +++ A+EY
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYC 124
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H IV+RDLKPEN+L+ ++ ++ ++DF LS
Sbjct: 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 453 GTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
G+ Y APE+I G+ + G VD W+ GI LY +L G+ PF E L+ V + +
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF-DDEFIPNLFKKVNSCV-YV 226
Query: 512 ESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+S A+ LI+ ++V +P R+ + EI++ P+F
Sbjct: 227 MPDFLSPGAQSLIRRMIVADPMQRITIQ----EIRRDPWFN 263
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G Y TK FA KV+ K+ L K + + TE I +SLD+P + +
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
FE D F +V+E C L L +R+ K +E ++++ + + ++YLH +++RD
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 151
Query: 341 LKPENVLVREDGHIMLSDFDLSLR 364
LK N+ + +D + + DF L+ +
Sbjct: 152 LKLGNLFLNDDMDVKIGDFGLATK 175
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R GT Y+APE++ +GH VD W+ G LY LL GK PF+ S + T +
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNR 535
P ++ A LI+ +L +P R
Sbjct: 242 EYSVPRH--INPVASALIRRMLHADPTLR 268
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G G V+ E T T A K++ ++ ++++ + E ++ LDH L LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV---KNEISVMNQLDHANLIQLYD 153
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
FE+ LVME+ GG+L R +E ++ ++ + ++H + I++ D
Sbjct: 154 AFESKNDIVLVMEYVDGGELFD-RIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 341 LKPENVLV--REDGHIMLSDFDLSLR 364
LKPEN+L R+ I + DF L+ R
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARR 238
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVG--QPLRF 510
GT E+LAPE++ + D W+ G+ Y LL G +PF G + TL N++ L
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
E +S A++ I LL+KE R++ A+E +HP+
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRIS----ASEALKHPWL 346
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G + TK FA K++ K+ L K + + E I +SL H + +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
FE + F +V+E C L L +R+ K +E ++Y+ +++L +YLH +++RD
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 341 LKPENVLVREDGHIMLSDFDLSLR 364
LK N+ + ED + + DF L+ +
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATK 190
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 441 AEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
E R GT Y+APE++ +GH VD W+ G +Y LL GK PF+ S + T
Sbjct: 191 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 250
Query: 501 YNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNR 535
+ P+ ++ A LI+ +L +P R
Sbjct: 251 LRIKKNEYSIPKH--INPVAASLIQKMLQTDPTAR 283
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G + TK FA K++ K+ L K + + E I +SL H + +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
FE + F +V+E C L L +R+ K +E ++Y+ +++L +YLH +++RD
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 341 LKPENVLVREDGHIMLSDFDLSLR 364
LK N+ + ED + + DF L+ +
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATK 170
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 441 AEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
E R + GT Y+APE++ +GH VD W+ G +Y LL GK PF+ S + T
Sbjct: 171 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 230
Query: 501 YNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNR 535
+ P+ ++ A LI+ +L +P R
Sbjct: 231 LRIKKNEYSIPKH--INPVAASLIQKMLQTDPTAR 263
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F L+K+G G G V+ T+ A+K++D E + Q E +L D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 66
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ Y + D ++ME+ GG L + P E + + E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 123
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPA 393
++RD+K NVL+ E G + L+DF ++ ++ T +K +T P P Q A
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSA 180
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV 503
T + +FVGT ++APE+IK + S D W+ GI EL G+ P L+ +
Sbjct: 157 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
Query: 504 VGQPLRFPESPVVSFSA--RDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P P + ++S ++ ++ L KEP + R A E+ +H F
Sbjct: 217 ---PKNNPPTLEGNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 259
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G + TK FA K++ K+ L K + + E I +SL H + +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
FE + F +V+E C L L +R+ K +E ++Y+ +++L +YLH +++RD
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 341 LKPENVLVREDGHIMLSDFDLSLR 364
LK N+ + ED + + DF L+ +
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATK 188
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 441 AEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
E R GT Y+APE++ +GH VD W+ G +Y LL GK PF+ S + T
Sbjct: 189 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 248
Query: 501 YNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNR 535
+ P+ ++ A LI+ +L +P R
Sbjct: 249 LRIKKNEYSIPKH--INPVAASLIQKMLQTDPTAR 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G + TK FA K++ K+ L K + + E I +SL H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
FE + F +V+E C L L +R+ K +E ++Y+ +++L +YLH +++RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 341 LKPENVLVREDGHIMLSDFDLSLR 364
LK N+ + ED + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATK 166
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 441 AEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
E R + GT Y+APE++ +GH VD W+ G +Y LL GK PF+ S + T
Sbjct: 167 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 226
Query: 501 YNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNR 535
+ P+ ++ A LI+ +L +P R
Sbjct: 227 LRIKKNEYSIPKH--INPVAASLIQKMLQTDPTAR 259
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 7/179 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F L+K+G G G V+ T+ A+K++D E + Q E +L D P+
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 86
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ Y + D ++ME+ GG L + P E + + E+L L+YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 143
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPA 393
++RD+K NVL+ E G + L+DF ++ ++ T +K +T P P Q A
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSA 200
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV 503
T + +FVGT ++APE+IK + S D W+ GI EL G+ P L+ +
Sbjct: 177 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 236
Query: 504 VGQPLRFPESPVVSFSA--RDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P P + ++S ++ ++ L KEP + R A E+ +H F
Sbjct: 237 ---PKNNPPTLEGNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 279
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
Q++ +A+R G + +FR+ KK+G G VY + A+K + L K
Sbjct: 15 QFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK 74
Query: 256 KLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ--RQPGKYFS 313
E ++L+ L+HP + Y F D +V+E GDL + + ++ +
Sbjct: 75 ARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP 134
Query: 314 EQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
E+ V Y ++ ALE++H +++RD+KP NV + G + L D L
Sbjct: 135 ERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL 182
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVG--QP 507
S VGT Y++PE I G+ D W+ G LYE+ ++PF G ++ LY++ +
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQ 252
Query: 508 LRFPESPVVSFSA--RDLIKGLLVKEPQNR 535
+P P +S R L+ + +P+ R
Sbjct: 253 CDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G + TK FA K++ K+ L K + + E I +SL H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
FE + F +V+E C L L +R+ K +E ++Y+ +++L +YLH +++RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 341 LKPENVLVREDGHIMLSDFDLSLR 364
LK N+ + ED + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATK 166
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 441 AEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
E R + GT Y+APE++ +GH VD W+ G +Y LL GK PF+ S + T
Sbjct: 167 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 226
Query: 501 YNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNR 535
+ P+ ++ A LI+ +L +P R
Sbjct: 227 LRIKKNEYSIPKH--INPVAASLIQKMLQTDPTAR 259
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ ++ LG G G V + T+ +A+KV++KAS K K E E+L+ LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPN 82
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L+ E +V E GG+L + K FSE + +V + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 335 GIVYRDLKPENVLV---REDGHIMLSDFDLS 362
IV+RDLKPEN+L+ +D I + DF LS
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV 504
N + +GT Y+APE+++G + D W+ G+ LY LL G PF G L V
Sbjct: 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
Query: 505 GQPLRF--PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
F P+ +S A+DLI+ +L P R+ AT+ +HP+ Q
Sbjct: 236 TGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQ 281
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F +L+KLG G GSVY + T A+K + S L E I+Q D P
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPH 85
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ Y + + +VME+C G + + R K +E + + L LEYLH +
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RD+K N+L+ +GH L+DF ++
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVA 172
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 446 ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVG 505
A+ +GT ++APE+I+ G+ D W+ GI E+ GK P+ ++ +
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT 239
Query: 506 QP---LRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
P R PE +F+ D +K LVK P+ R AT++ QHPF +
Sbjct: 240 NPPPTFRKPELWSDNFT--DFVKQCLVKSPEQRAT----ATQLLQHPFVR 283
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G + TK FA K++ K+ L K + + E I +SL H + +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRD 340
FE + F +V+E C L L +R+ K +E ++Y+ +++L +YLH +++RD
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 341 LKPENVLVREDGHIMLSDFDLS 362
LK N+ + ED + + DF L+
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLA 162
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 441 AEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
E R GT Y+APE++ +GH VD W+ G +Y LL GK PF+ S + T
Sbjct: 165 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 224
Query: 501 YNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNR 535
+ P+ ++ A LI+ +L +P R
Sbjct: 225 LRIKKNEYSIPKH--INPVAASLIQKMLQTDPTAR 257
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 60
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 61
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 424 KPKNEMGNQVSPLPEL-IAEPTNARSM-------SFVGTHEYLAPEIIKGEGHGSAVDWW 475
KP+N + + + PL ++ I + +R + +GT EYLAPEI+ + +A D W
Sbjct: 158 KPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMW 217
Query: 476 TFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPESPVVSFS--ARDLIKGLLVKEPQ 533
GI Y LL +PF G +N+ T N+ + + E S S A D I+ LLVK P+
Sbjct: 218 NIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPE 277
Query: 534 NR 535
R
Sbjct: 278 KR 279
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 19/189 (10%)
Query: 213 GHFRLL--KKLGCGDIGSVY--LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL- 267
+F +L K+LG G V +S+ TG + +A K + K +R + RA+ EI
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQE--YAAKFLKK---RRRGQDCRAEILHEIAV 81
Query: 268 --QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVL 325
+ P + L+ +E L++E+ GG++ +L + + SE V + ++L
Sbjct: 82 LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL 141
Query: 326 LALEYLHMLGIVYRDLKPENVLVRED---GHIMLSDFDLSLR----CAVSPTVVKSSTLE 378
+ YLH IV+ DLKP+N+L+ G I + DF +S + C + + L
Sbjct: 142 EGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLA 201
Query: 379 SEPLRKNPV 387
E L +P+
Sbjct: 202 PEILNYDPI 210
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F L+K+G G G V+ T+ A+K++D E + Q E +L D P+
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 81
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ Y + D ++ME+ GG L + P E + + E+L L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 138
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPA 393
++RD+K NVL+ E G + L+DF ++ ++ T +K + P P Q A
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSA 195
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV 503
T + FVGT ++APE+IK + S D W+ GI EL G+ P L+ +
Sbjct: 172 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
Query: 504 VGQPLRFPESPVVSFSA--RDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P P + ++S ++ ++ L KEP + R A E+ +H F
Sbjct: 232 ---PKNNPPTLEGNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 274
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFF--QGVNWALIRCASPP 565
F + + S A+D I+ LLVK+P+ R+ + QHP+ + AL R AS
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKASAV 291
Query: 566 EIPK 569
+ K
Sbjct: 292 NMEK 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K K+S R+ + R ERE IL
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAK-------FIKKRRTKSS---RRGVSREDIEREVSIL 68
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L++E GG+L + +E+ ++ ++L
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLS 362
+ YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPE 512
T E+ APEI+ E G D W G+ Y LL G +PF G ++ TL NV F E
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 271
Query: 513 SPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQG 553
S S A+D IK LL KEP+ RL +HP+ +G
Sbjct: 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDAL----EHPWLKG 310
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Query: 201 QAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKAS-LEKRKKLLR 259
Q V VK G + ++ +L++LG G G V+ T F K ++ L+K
Sbjct: 40 QPVEVKQGSV-YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK----YT 94
Query: 260 AQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF 319
+ E I+ L HP L L+ FE L++EF GG+L + K SE V
Sbjct: 95 VKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVIN 153
Query: 320 YVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTLE 378
Y+ + L+++H IV+ D+KPEN++ + D L ++P +VK +T
Sbjct: 154 YMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT 213
Query: 379 SE 380
+E
Sbjct: 214 AE 215
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 7/172 (4%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE- 265
D VL + L + +G G V T FA+K++D A L +RE
Sbjct: 18 DDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREA 77
Query: 266 -ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVA 322
I L HP + L + +D +V EF G DL +++ G +SE Y+
Sbjct: 78 SICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 323 EVLLALEYLHMLGIVYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTV 371
++L AL Y H I++RD+KPENVL+ + L DF ++++ S V
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLV 189
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
VGT ++APE++K E +G VD W G+ L+ LL G PF G++ R + G+ P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 512 -ESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWALIRCASPPEIPKP 570
+ +S SA+DL++ +L+ +P R+ E HP+ + + R A +P+
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERD----RYAYKIHLPET 305
Query: 571 VE 572
VE
Sbjct: 306 VE 307
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 61
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 61
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 61
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F L+K+G G G V+ T+ A+K++D E + Q E +L D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 66
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ Y + D ++ME+ GG L + P E + + E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 123
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPA 393
++RD+K NVL+ E G + L+DF ++ ++ T +K + P P Q A
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSA 180
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV 503
T + FVGT ++APE+IK + S D W+ GI EL G+ P L+ +
Sbjct: 157 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
Query: 504 VGQPLRFPESPVVSFSA--RDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P P + ++S ++ ++ L KEP + R A E+ +H F
Sbjct: 217 ---PKNNPPTLEGNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 259
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 44/191 (23%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKR--KKLLRAQTEREILQSLDH 272
+ L +G G G V ++ T+ A+K+M+K + + K + R +TE +++ L H
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDL-------------------------------- 300
P + LY +E +++ CLVME C GG L
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 301 -------HTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDG- 352
H R+ E+ + + ++ AL YLH GI +RD+KPEN L +
Sbjct: 148 EAINGSIHGFRESLDFVQ-REKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS 206
Query: 353 -HIMLSDFDLS 362
I L DF LS
Sbjct: 207 FEIKLVDFGLS 217
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 453 GTHEYLAPEIIK--GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
GT ++APE++ E +G D W+ G+ L+ LL G PF G + T+ V+ + L F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 511 --PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P V+S ARDL+ LL + R R QHP+
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL----QHPWI 334
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMD-KASLEKRKKLLRAQTEREILQSL 270
V + L++ LG G G V L+ T+ A+K++D K +++ + + + E I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEIXINKML 61
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
+H + Y H L +E+C GG+L + +P E + + +++ + Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
LH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFF--QGVNWALIRCAS 563
F + + S A+D I+ LLVK+P+ R+ + QHP+ + AL R AS
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKAS 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K K+S R+ + R ERE IL
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAK-------FIKKRRTKSS---RRGVSREDIEREVSIL 68
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L++E GG+L + +E+ ++ ++L
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLS 362
+ YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMD-KASLEKRKKLLRAQTEREILQSL 270
V + L++ LG G G V L+ T+ A+K++D K +++ + + + E I + L
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEIXINKML 61
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
+H + Y H L +E+C GG+L + +P E + + +++ + Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
LH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMD-KASLEKRKKLLRAQTEREILQSL 270
V + L++ LG G G V L+ T+ A+K++D K +++ + + + E I + L
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEIXINKML 62
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
+H + Y H L +E+C GG+L + +P E + + +++ + Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
LH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFF--QGVNWALIRCASPP 565
F + + S A+D I+ LLVK+P+ R+ + QHP+ + AL S P
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSSAWSHP 291
Query: 566 EIPK 569
+ K
Sbjct: 292 QFEK 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEK-RKKLLRAQTERE--ILQSLDHPFL 275
++LG G V T +A K + K + R+ + R ERE IL+ + HP +
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
TL+ +E L++E GG+L + +E+ ++ ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 336 IVYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTVVKSSTLESEPL 382
I + DLKPEN+++ + I + DF L+ + +P V + EPL
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFF--QGVNWALIRCASPP 565
F + + S A+D I+ LLVK+P+ R+ + QHP+ + AL S P
Sbjct: 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSSAWSHP 290
Query: 566 EIPK 569
+ K
Sbjct: 291 QFEK 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K K+S R+ + R ERE IL
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAK-------FIKKRRTKSS---RRGVSREDIEREVSIL 67
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L++E GG+L + +E+ ++ ++L
Sbjct: 68 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 125
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTVVKS 374
+ YLH L I + DLKPEN+++ + I + DF L+ + +P V
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 375 STLESEPL 382
+ EPL
Sbjct: 186 EIVNYEPL 193
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFF--QGVNWALIRCASPP 565
F + + S A+D I+ LLVK+P+ R+ + QHP+ + AL S P
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSSAWSHP 291
Query: 566 EIPK 569
+ K
Sbjct: 292 QFEK 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K K+S R+ + R ERE IL
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAK-------FIKKRRTKSS---RRGVSREDIEREVSIL 68
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L++E GG+L + +E+ ++ ++L
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTVVKS 374
+ YLH L I + DLKPEN+++ + I + DF L+ + +P V
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 375 STLESEPL 382
+ EPL
Sbjct: 187 EIVNYEPL 194
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFF--QGVNWALIRCASPP 565
F + + S A+D I+ LLVK+P+ R+ + QHP+ + AL S P
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSSAWSHP 291
Query: 566 EIPK 569
+ K
Sbjct: 292 QFEK 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 27/188 (14%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K K+S R+ + R ERE IL
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAK-------FIKKRRTKSS---RRGVSREDIEREVSIL 68
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L+ E GG+L + +E+ ++ ++L
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTVVKS 374
+ YLH L I + DLKPEN+++ + I + DF L+ + +P V
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 375 STLESEPL 382
+ EPL
Sbjct: 187 EIVNYEPL 194
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFF--QGVNWALIRCASPP 565
F + + S A+D I+ LLVK+P+ R+ + QHP+ + AL S P
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSSAWSHP 291
Query: 566 EIPK 569
+ K
Sbjct: 292 QFEK 295
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEK-RKKLLRAQTERE--ILQSLDHPFL 275
++LG G V T +A K + K + R+ + R ERE IL+ + HP +
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
TL+ +E L++E GG+L + +E+ ++ ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 336 IVYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTVVKSSTLESEPL 382
I + DLKPEN+++ + I + DF L+ + +P V + EPL
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 60
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFF--QGVNWALIRCAS 563
F + + S A+D I+ LLVK+P+ R+ + QHP+ + AL R AS
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKAS 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K K+S R+ + R ERE IL
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAK-------FIKKRRTKSS---RRGVSREDIEREVSIL 68
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L++E GG+L + +E+ ++ ++L
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLS 362
+ YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 60
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 60
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 59
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 117
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 118 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 60
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
F + + S A+D I+ LLVK+P+ R+ + QHP+ +
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K K+S R+ + R ERE IL
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAK-------FIKKRRTKSS---RRGVSREDIEREVSIL 68
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L++E GG+L + +E+ ++ ++L
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLS 362
+ YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVN--WALIRCAS 563
F E S A+D I+ LLVKE + RL + E +HP+ V+ A++R S
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDTQQAMVRRES 290
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 18/159 (11%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K +AS R+ + R + ERE IL
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAK-------FIKKRQSRAS---RRGVCREEIEREVSIL 69
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L++E GG+L ++ SE+ ++ ++L
Sbjct: 70 RQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLS 362
+ YLH I + DLKPEN+++ + HI L DF L+
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFF--QGVNWALIRCAS 563
F + + S A+D I+ LLVK+P+ R+ + QHP+ + AL R AS
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKAS 289
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K K+S R+ + R ERE IL
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAK-------FIKKRRTKSS---RRGVSREDIEREVSIL 68
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L++E GG+L + +E+ ++ ++L
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTVVKS 374
+ YLH L I + DLKPEN+++ + I + DF L+ + +P V
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 375 STLESEPL 382
+ EPL
Sbjct: 187 EIVNYEPL 194
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 61
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
F + + S A+D I+ LLVK+P+ R+ + QHP+ +
Sbjct: 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K K+S R+ + R ERE IL
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAK-------FIKKRRTKSS---RRGVSREDIEREVSIL 67
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L++E GG+L + +E+ ++ ++L
Sbjct: 68 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 125
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTVVKS 374
+ YLH L I + DLKPEN+++ + I + DF L+ + +P V
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 375 STLESEPL 382
+ EPL
Sbjct: 186 EIVNYEPL 193
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 60
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
F + + S A+D I+ LLVK+P+ R+ + QHP+ +
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K K+S R+ + R ERE IL
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAK-------FIKKRRTKSS---RRGVSREDIEREVSIL 68
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L++E GG+L + +E+ ++ ++L
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTVVKS 374
+ YLH L I + DLKPEN+++ + I + DF L+ + +P V
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 375 STLESEPL 382
+ EPL
Sbjct: 187 EIVNYEPL 194
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F L+++G G G V+ T+ A+K++D E + Q E +L D +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSSY 82
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ Y + ++ME+ GG L + P F E + + E+L L+YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHSE 139
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPA 393
++RD+K NVL+ E G + L+DF ++ ++ T +K +T P P Q A
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSA 196
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV 503
T + +FVGT ++APE+I+ + S D W+ GI EL G+ P L+ +
Sbjct: 173 TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 232
Query: 504 VGQPLRFPESPVVSF--SARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P P + V F S ++ I L K+P + R A E+ +H F
Sbjct: 233 ---PKNNPPTLVGDFTKSFKEFIDACLNKDP----SFRPTAKELLKHKFI 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
F + + S A+D I+ LLVK+P+ R+ + QHP+ +
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K K+S R+ + R ERE IL
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAK-------FIKKRRTKSS---RRGVSREDIEREVSIL 68
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L++E GG+L + +E+ ++ ++L
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTVVKS 374
+ YLH L I + DLKPEN+++ + I + DF L+ + +P V
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 375 STLESEPL 382
+ EPL
Sbjct: 187 EIVNYEPL 194
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 60
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 60
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
K+G G G V ++ T A+K MD ++R+ L E I++ H + +Y
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF---NEVVIMRDYHHDNVVDMY 108
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ + +VMEF GG L + +E+ + VL AL YLH G+++R
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 340 DLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVVKSSTLESEPLRKNP 386
D+K +++L+ DG I LSDF CA VS V K L P P
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGF---CAQVSKEVPKRKXLVGTPYWMAP 210
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ-PLR 509
VGT ++APE+I +G+ VD W+ GI + E++ G+ P+ + + P R
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPR 260
Query: 510 FPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWALIRCASPPEIPK 569
+ VS R + +LV+EP R A E+ HPF ++ A PP
Sbjct: 261 VKDLHKVSSVLRGFLDLMLVREPSQRAT----AQELLGHPF--------LKLAGPPSCIV 308
Query: 570 PV 571
P+
Sbjct: 309 PL 310
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 60
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVN--WALIRCAS 563
F E S A+D I+ LLVKE + RL + E +HP+ V+ A++R S
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVRRES 290
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K +AS R+ + R + ERE IL
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAK-------FIKKRQSRAS---RRGVSREEIEREVSIL 69
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + H + TL+ +E L++E GG+L ++ SE+ ++ ++L
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLS 362
+ YLH I + DLKPEN+++ + HI L DF L+
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 60
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
K+G G G V ++ + + A+K MD ++R+ L E I++ H + +Y
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 214
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ +VMEF GG L + +E+ + VL AL LH G+++R
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 340 DLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVVKSSTLESEPLRKNPVYCVQPACI 395
D+K +++L+ DG + LSDF CA VS V + L P Y + P I
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTP------YWMAPELI 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R VGT ++APE+I +G VD W+ GI + E++ G+ P+ + +
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 362
Query: 507 -PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P R VS S + + LLV++P A R A E+ +HPF
Sbjct: 363 LPPRLKNLHKVSPSLKGFLDRLLVRDP----AQRATAAELLKHPFL 404
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QS 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINKM 61
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEK-RKKLLRAQTERE--ILQSL 270
H+ + ++LG G V GT +A K + K L R+ + R + ERE IL+ +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
HP + TL+ FE L++E GG+L + +E ++ ++L + Y
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 123
Query: 331 LHMLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTVVKSSTL 377
LH I + DLKPEN+++ + I L DF ++ + +P V +
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 183
Query: 378 ESEPL 382
EPL
Sbjct: 184 NYEPL 188
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 229
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLAC 538
F E + S A+D I+ LLVK+P+ R+
Sbjct: 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTI 260
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS-- 269
V + L++ LG G G V L+ T+ A+K++D KR ++EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM----KRAVDCPENIKKEICINAM 61
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+H + Y H L +E+C GG+L + +P E + + +++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
YLH +GI +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVN--WALIRCAS 563
F E S A+D I+ LLVKE + RL + E +HP+ V+ A++R S
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVRRES 290
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K +AS R+ + R + ERE IL
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAK-------FIKKRQSRAS---RRGVSREEIEREVSIL 69
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + H + TL+ +E L++E GG+L ++ SE+ ++ ++L
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLS 362
+ YLH I + DLKPEN+++ + HI L DF L+
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVN--WALIRCAS 563
F E S A+D I+ LLVKE + RL + E +HP+ V+ A++R S
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVRRES 290
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K +AS R+ + R + ERE IL
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAK-------FIKKRQSRAS---RRGVSREEIEREVSIL 69
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + H + TL+ +E L++E GG+L ++ SE+ ++ ++L
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLS 362
+ YLH I + DLKPEN+++ + HI L DF L+
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEK-RKKLLRAQTERE--ILQSL 270
H+ + ++LG G V GT +A K + K L R+ + R + ERE IL+ +
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
HP + TL+ FE L++E GG+L + +E ++ ++L + Y
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 130
Query: 331 LHMLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTVVKSSTL 377
LH I + DLKPEN+++ + I L DF ++ + +P V +
Sbjct: 131 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 190
Query: 378 ESEPL 382
EPL
Sbjct: 191 NYEPL 195
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 236
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLAC 538
F E + S A+D I+ LLVK+P+ R+
Sbjct: 237 FDEEYFSNTSELAKDFIRRLLVKDPKRRMXI 267
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEK-RKKLLRAQTERE--ILQSL 270
H+ + ++LG G V GT +A K + K L R+ + R + ERE IL+ +
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
HP + TL+ FE L++E GG+L + +E ++ ++L + Y
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 144
Query: 331 LHMLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAV---------SPTVVKSSTL 377
LH I + DLKPEN+++ + I L DF ++ + +P V +
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 204
Query: 378 ESEPL 382
EPL
Sbjct: 205 NYEPL 209
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 191 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 250
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLAC 538
F E + S A+D I+ LLVK+P+ R+
Sbjct: 251 FDEEYFSNTSELAKDFIRRLLVKDPKRRMXI 281
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 201 QAVRVK-DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLR 259
Q V +K D VL H+ + ++LG G G V+ T FA K + E K+ +R
Sbjct: 146 QPVEIKHDHVLD--HYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-MTPHESDKETVR 202
Query: 260 AQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF 319
E + + L HP L L+ FE D ++ EF GG+L + K ++AV+
Sbjct: 203 K--EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE- 259
Query: 320 YVAEVLLALEYLHMLGIVYRDLKPENVL--VREDGHIMLSDFDLS 362
Y+ +V L ++H V+ DLKPEN++ + + L DF L+
Sbjct: 260 YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
GT E+ APE+ +G+ G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 512 ESPV--VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
+S +S +D I+ LL+ +P R+ + +HP+
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWL 414
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVN--WALIR 560
F E S A+D I+ LLVKE + RL + E +HP+ V+ A++R
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K +AS R+ + R + ERE IL
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAK-------FIKKRQSRAS---RRGVSREEIEREVSIL 69
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + H + TL+ +E L++E GG+L ++ SE+ ++ ++L
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLS 362
+ YLH I + DLKPEN+++ + HI L DF L+
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVN--WALIRCAS 563
F E S A+D I+ LLVKE + RL + E +HP+ V+ A++R S
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVRRES 290
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K +AS R+ + R + ERE IL
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAK-------FIKKRQSRAS---RRGVSREEIEREVSIL 69
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + H + TL+ +E L++E GG+L ++ SE+ ++ ++L
Sbjct: 70 RQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLS 362
+ YLH I + DLKPEN+++ + HI L DF L+
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 136/342 (39%), Gaps = 70/342 (20%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLDHPFL 275
L+K+G G G+V+ ++ T A+K + L+ + + + REI L+ L H +
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIVALK---RVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
L+ +DK LV EFC DL G + VK ++ ++L L + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 336 IVYRDLKPENVLVREDGHIMLSDFDLS------LRCAVSPTVVKSSTLESEPLRKNPVYC 389
+++RDLKP+N+L+ +G + L+DF L+ +RC S VV + L +Y
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC-YSAEVVTLWYRPPDVLFGAKLYS 180
Query: 390 VQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSM 449
CI + + + P N++ +Q+ + L+ PT +
Sbjct: 181 TSIDMWSAGCIFAE------------LANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
S +Y P+ +L NVV
Sbjct: 229 SMTKLPDY-------------------------------KPYPMYPATTSLVNVV----- 252
Query: 510 FPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P ++ + RDL++ LL P R++ A E QHP+F
Sbjct: 253 ----PKLNATGRDLLQNLLKCNPVQRIS----AEEALQHPYF 286
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
K+G G G V ++ + + A+K MD ++R+ L E I++ H + +Y
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 137
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ +VMEF GG L + +E+ + VL AL LH G+++R
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 340 DLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVVKSSTLESEPLRKNP 386
D+K +++L+ DG + LSDF CA VS V + L P P
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAP 239
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R VGT ++APE+I +G VD W+ GI + E++ G+ P+ + +
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 285
Query: 507 -PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P R VS S + + LLV++P A R A E+ +HPF
Sbjct: 286 LPPRLKNLHKVSPSLKGFLDRLLVRDP----AQRATAAELLKHPFL 327
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 201 QAVRVK-DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLR 259
Q V +K D VL H+ + ++LG G G V+ T FA K + E K+ +R
Sbjct: 40 QPVEIKHDHVLD--HYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-MTPHESDKETVR 96
Query: 260 AQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF 319
E + + L HP L L+ FE D ++ EF GG+L + K ++AV+
Sbjct: 97 K--EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE- 153
Query: 320 YVAEVLLALEYLHMLGIVYRDLKPENVL--VREDGHIMLSDFDLS 362
Y+ +V L ++H V+ DLKPEN++ + + L DF L+
Sbjct: 154 YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 198
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
GT E+ APE+ +G+ G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 512 ESPV--VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
+S +S +D I+ LL+ +P R+ + +HP+
Sbjct: 271 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWL 308
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ GT ++APEI+ E G D W+ G+ Y LL G +PF G + TL NV
Sbjct: 176 NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 510 FPESPVVSFS--ARDLIKGLLVKEPQNRLACRRGATEIKQHPFF--QGVNWALIRCAS 563
F + + S A+D I+ LLVK+P+ R+ + QHP+ + AL R AS
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKAS 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--IL 267
LG G F ++KK G Y ++ F K K+S R+ + R ERE IL
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAK-------FIKKRRTKSS---RRGVSREDIEREVSIL 68
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ + HP + TL+ +E L++E GG+L + +E+ ++ ++L
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 328 LEYLHMLGIVYRDLKPENVLVREDG----HIMLSDFDLS 362
+ YLH L I + DLKPEN+++ + I + DF L+
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 450 SFVGTHEYLAPEIIKGE------GHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV 503
S GT YLAPEII+ G+G VD W+ G+ +Y LL G PF + L +
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241
Query: 504 VGQPLRF--PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+ +F PE S + +DL+ LV +PQ R A E HPFFQ
Sbjct: 242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQ 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 23/170 (13%)
Query: 241 FAMKVMDKA-----SLEKRKKLLRAQT-EREILQSLD-HPFLPTLYTHFETDKFSCLVME 293
+A+K++D S E+ ++L A E +IL+ + HP + L +ET+ F LV +
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 294 FCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGH 353
G+L + SE+ + + +L + LH L IV+RDLKPEN+L+ +D +
Sbjct: 105 LMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 162
Query: 354 IMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEPSCIQPS 403
I L+DF S C + P E LR C P+ + P I+ S
Sbjct: 163 IKLTDFGFS--CQLDP---------GEKLRS---VCGTPSYLAPEIIECS 198
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 24/170 (14%)
Query: 241 FAMKVMD----KASLEKRKKLLRAQTERE---ILQSLDHPFLPTLYTHFETDKFSCLVME 293
FA+K+M+ + S E+ +++ R T RE + Q HP + TL +E+ F LV +
Sbjct: 122 FAVKIMEVTAERLSPEQLEEV-REATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFD 180
Query: 294 FCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGH 353
G+L + SE+ + + +L A+ +LH IV+RDLKPEN+L+ ++
Sbjct: 181 LMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQ 238
Query: 354 IMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEPSCIQPS 403
I LSDF S C + P E LR+ C P + P ++ S
Sbjct: 239 IRLSDFGFS--CHLEP---------GEKLRE---LCGTPGYLAPEILKCS 274
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 453 GTHEYLAPEIIKGE------GHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
GT YLAPEI+K G+G VD W G+ L+ LL G PF L ++
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG 320
Query: 507 PLRF--PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+F PE S + +DLI LL +P+ RL A + QHPFF+
Sbjct: 321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT----AEQALQHPFFE 364
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 7/179 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F L ++G G G VY TK A+K++D E + Q E +L D P+
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 78
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ + + ++ME+ GG L +PG E + + E+L L+YLH
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGS--ALDLLKPGP-LEETYIATILREILKGLDYLHSE 135
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPA 393
++RD+K NVL+ E G + L+DF ++ ++ T +K + P P Q A
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSA 192
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP 490
T + FVGT ++APE+IK + D W+ GI EL G+ P
Sbjct: 169 TQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
++ + ++LG G V T FA K+++ L R + + E I + L HP
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 88
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ L+ + + F LV + GG+L +++SE + ++L ++ Y H
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 334 LGIVYRDLKPENVLVREDGH---IMLSDFDLSL 363
GIV+R+LKPEN+L+ + L+DF L++
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT YL+PE++K + + VD W G+ LY LL G PF + + +
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 511 --PESPVVSFSARDLIKGLLVKEPQNRL 536
PE V+ A+ LI +L P+ R+
Sbjct: 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 277
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
Query: 208 GVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI- 266
G + + + ++G G G+VY + + + A+K + + L T RE+
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63
Query: 267 ----LQSLDHPFLPTLYTHFETDKFS-----CLVMEFCPGGDLHTLRQRQPGKYFSEQAV 317
L++ +HP + L T + LV E DL T + P + +
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETI 122
Query: 318 KFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL----SLRCAVSPTVV 372
K + + L L++LH IV+RDLKPEN+LV G + L+DF L S + A++P VV
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV 181
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG---SENRATLYNVVGQP 507
V T Y APE++ + + VD W+ G E+ K F G ++ +++++G P
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
K+G G G V ++ + + A+K MD ++R+ L E I++ H + +Y
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 94
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ +VMEF GG L + +E+ + VL AL LH G+++R
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 340 DLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVVKSSTLESEPLRKNP 386
D+K +++L+ DG + LSDF CA VS V + L P P
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAP 196
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R VGT ++APE+I +G VD W+ GI + E++ G+ P+ + +
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 242
Query: 507 -PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P R VS S + + LLV++P A R A E+ +HPF
Sbjct: 243 LPPRLKNLHKVSPSLKGFLDRLLVRDP----AQRATAAELLKHPFL 284
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
++L ++LG G V T +A K+++ L R + + E I + L HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 64
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L+ + F LV + GG+L +Y+SE + ++L ++ + H+
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 335 GIVYRDLKPENVLV---REDGHIMLSDFDLSL 363
GIV+RDLKPEN+L+ + + L+DF L++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT YL+PE+++ + +G VD W G+ LY LL G PF + + F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 511 --PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE V+ A+DLI +L P R+ A+E +HP+
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRIT----ASEALKHPWI 264
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
K+G G G V ++ + + A+K MD ++R+ L E I++ H + +Y
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 92
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ +VMEF GG L + +E+ + VL AL LH G+++R
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 340 DLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVVKSSTLESEPLRKNP 386
D+K +++L+ DG + LSDF CA VS V + L P P
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAP 194
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R VGT ++APE+I +G VD W+ GI + E++ G+ P+ + +
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 240
Query: 507 -PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P R VS S + + LLV++P A R A E+ +HPF
Sbjct: 241 LPPRLKNLHKVSPSLKGFLDRLLVRDP----AQRATAAELLKHPFL 282
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 453 GTHEYLAPEIIKGE------GHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
GT YLAPEII+ G+G VD W+ G+ +Y LL G PF + L ++
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 231
Query: 507 PLRF--PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+F PE S + +DL+ LV +PQ R A E HPFFQ
Sbjct: 232 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQ 275
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 23/170 (13%)
Query: 241 FAMKVMDKA-----SLEKRKKLLRAQT-EREILQSLD-HPFLPTLYTHFETDKFSCLVME 293
+A+K++D S E+ ++L A E +IL+ + HP + L +ET+ F LV +
Sbjct: 32 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 91
Query: 294 FCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGH 353
G+L + SE+ + + +L + LH L IV+RDLKPEN+L+ +D +
Sbjct: 92 LMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 149
Query: 354 IMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEPSCIQPS 403
I L+DF S C + P E LR+ C P+ + P I+ S
Sbjct: 150 IKLTDFGFS--CQLDP---------GEKLRE---VCGTPSYLAPEIIECS 185
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 453 GTHEYLAPEIIKGE------GHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
GT YLAPEII+ G+G VD W+ G+ +Y LL G PF + L ++
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 244
Query: 507 PLRF--PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+F PE S + +DL+ LV +PQ R A E HPFFQ
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQ 288
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 23/170 (13%)
Query: 241 FAMKVMDKA-----SLEKRKKLLRAQT-EREILQSLD-HPFLPTLYTHFETDKFSCLVME 293
+A+K++D S E+ ++L A E +IL+ + HP + L +ET+ F LV +
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 294 FCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGH 353
G+L + SE+ + + +L + LH L IV+RDLKPEN+L+ +D +
Sbjct: 105 LMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN 162
Query: 354 IMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEPSCIQPS 403
I L+DF S C + P E LR+ C P+ + P I+ S
Sbjct: 163 IKLTDFGFS--CQLDP---------GEKLRE---VCGTPSYLAPEIIECS 198
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
K+G G G V ++ + + A+K MD ++R+ L E I++ H + +Y
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 87
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ +VMEF GG L + +E+ + VL AL LH G+++R
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 340 DLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVVKSSTLESEPLRKNP 386
D+K +++L+ DG + LSDF CA VS V + L P P
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAP 189
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R VGT ++APE+I +G VD W+ GI + E++ G+ P+ + +
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 235
Query: 507 -PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P R VS S + + LLV++P A R A E+ +HPF
Sbjct: 236 LPPRLKNLHKVSPSLKGFLDRLLVRDP----AQRATAAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
K+G G G V ++ + + A+K MD ++R+ L E I++ H + +Y
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQHENVVEMY 83
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ +VMEF GG L + +E+ + VL AL LH G+++R
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 340 DLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVVKSSTLESEPLRKNP 386
D+K +++L+ DG + LSDF CA VS V + L P P
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGF---CAQVSKEVPRRKXLVGTPYWMAP 185
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R VGT ++APE+I +G VD W+ GI + E++ G+ P+ + +
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 231
Query: 507 -PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P R VS S + + LLV++P A R A E+ +HPF
Sbjct: 232 LPPRLKNLHKVSPSLKGFLDRLLVRDP----AQRATAAELLKHPFL 273
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
++++ KLG G + +VYL+E T A+K + EK + L R + E L H
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ ++ E D LVME+ G L + G + A+ F ++L +++ H +
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH-GPLSVDTAINF-TNQILDGIKHAHDM 130
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT 370
IV+RD+KP+N+L+ D + L FD + A+S T
Sbjct: 131 RIVHRDIKPQNILI--DSNKTLKIFDFGIAKALSET 164
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG 493
++E + ++ +GT +Y +PE KGE D ++ GI LYE+L G+ PF G
Sbjct: 161 LSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPESPV 515
EY APE+ + + +A D W+ G +Y LL G PF N+ + N++ F E
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 516 --VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+S A D + LLVKE ++R+ A+E QHP+ +
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRMT----ASEALQHPWLK 262
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Query: 215 FRLLKKLGCGDIGSVY-LSELTGTKCYFA----MKVMDKASLEKRKKLLRAQTEREILQS 269
+ + + LG G+ G V+ E + K Y A +K D+ ++K +L R IL
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILH- 65
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+ FE+ + ++ EF G D+ R +E+ + YV +V AL+
Sbjct: 66 --------LHESFESMEELVMIFEFISGLDIFE-RINTSAFELNEREIVSYVHQVCEALQ 116
Query: 330 YLHMLGIVYRDLKPENVL 347
+LH I + D++PEN++
Sbjct: 117 FLHSHNIGHFDIRPENII 134
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
++L ++LG G V T +A K+++ L R + + E I + L HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 64
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L+ + F LV + GG+L +Y+SE + ++L ++ + H+
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 335 GIVYRDLKPENVLV---REDGHIMLSDFDLSL 363
GIV+RDLKPEN+L+ + + L+DF L++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT YL+PE+++ + +G VD W G+ LY LL G PF + + F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 511 --PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE V+ A+DLI +L P R+ A+E +HP+
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRIT----ASEALKHPWI 264
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 136/342 (39%), Gaps = 70/342 (20%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLDHPFL 275
L+K+G G G+V+ ++ T A+K + L+ + + + REI L+ L H +
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIVALK---RVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
L+ +DK LV EFC DL G + VK ++ ++L L + H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 336 IVYRDLKPENVLVREDGHIMLSDFDLS------LRCAVSPTVVKSSTLESEPLRKNPVYC 389
+++RDLKP+N+L+ +G + L++F L+ +RC S VV + L +Y
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC-YSAEVVTLWYRPPDVLFGAKLYS 180
Query: 390 VQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSM 449
CI + + + P N++ +Q+ + L+ PT +
Sbjct: 181 TSIDMWSAGCIFAE------------LANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
S +Y P+ +L NVV
Sbjct: 229 SMTKLPDY-------------------------------KPYPMYPATTSLVNVV----- 252
Query: 510 FPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P ++ + RDL++ LL P R++ A E QHP+F
Sbjct: 253 ----PKLNATGRDLLQNLLKCNPVQRIS----AEEALQHPYF 286
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 236 GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFC 295
T +A+KV+DK+ + +++ +L+ HP + TL ++ K LV E
Sbjct: 50 ATNMEYAVKVIDKSKRDPSEEI------EILLRYGQHPNIITLKDVYDDGKHVYLVTELM 103
Query: 296 PGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVL-VREDGH- 353
GG+L RQ K+FSE+ F + + +EYLH G+V+RDLKP N+L V E G+
Sbjct: 104 RGGELLDKILRQ--KFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNP 161
Query: 354 --IMLSDFDLS 362
+ + DF +
Sbjct: 162 ECLRICDFGFA 172
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG--SENRATLYN 502
N M+ T ++APE++K +G+ D W+ GI LY +L G TPF S+ +
Sbjct: 179 NGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILT 238
Query: 503 VVGQ---PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF 550
+G L VS +A+DL+ +L +P RL A ++ QHP+
Sbjct: 239 RIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLT----AKQVLQHPW 285
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
++ + ++LG G V T FA K+++ L R + + E I + L HP
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 64
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ L+ + + F LV + GG+L +++SE + ++L ++ Y H
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 334 LGIVYRDLKPENVLVREDGH---IMLSDFDLSL 363
GIV+R+LKPEN+L+ + L+DF L++
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 155
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT YL+PE++K + + VD W G+ LY LL G PF + + +
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 511 --PESPVVSFSARDLIKGLLVKEPQNRL 536
PE V+ A+ LI +L P+ R+
Sbjct: 226 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 253
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 10/168 (5%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
K+G G G V L+ + A+K+MD ++R+ L E I++ H + +Y
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF---NEVVIMRDYQHFNVVEMY 108
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ + ++MEF GG L + + +E+ + VL AL YLH G+++R
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 340 DLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVVKSSTLESEPLRKNP 386
D+K +++L+ DG + LSDF CA +S V K L P P
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGF---CAQISKDVPKRKXLVGTPYWMAP 210
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTP-FKGSENRATLYNVVGQPLR 509
VGT ++APE+I + + VD W+ GI + E++ G+ P F S +A P +
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK 260
Query: 510 FPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
S VS RD ++ +LV++PQ R A E+ HPF
Sbjct: 261 LKNSHKVSPVLRDFLERMLVRDPQERAT----AQELLDHPFL 298
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
++ + ++LG G V T FA K+++ L R + + E I + L HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 65
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ L+ + + F LV + GG+L +++SE + ++L ++ Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 334 LGIVYRDLKPENVLVREDGH---IMLSDFDLSL 363
GIV+R+LKPEN+L+ + L+DF L++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT YL+PE++K + + VD W G+ LY LL G PF + + +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 511 --PESPVVSFSARDLIKGLLVKEPQNRL 536
PE V+ A+ LI +L P+ R+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
++ + ++LG G V T FA K+++ L R + + E I + L HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 65
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
+ L+ + + F LV + GG+L +++SE + ++L ++ Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 334 LGIVYRDLKPENVLVREDGH---IMLSDFDLSL 363
GIV+R+LKPEN+L+ + L+DF L++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT YL+PE++K + + VD W G+ LY LL G PF + + +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 511 --PESPVVSFSARDLIKGLLVKEPQNRL 536
PE V+ A+ LI +L P+ R+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 236 GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFC 295
T FA+K++DK+ + +++ +L+ HP + TL ++ K+ +V E
Sbjct: 45 ATNXEFAVKIIDKSKRDPTEEI------EILLRYGQHPNIITLKDVYDDGKYVYVVTELX 98
Query: 296 PGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVL-VREDGH- 353
GG+L RQ K+FSE+ + + +EYLH G+V+RDLKP N+L V E G+
Sbjct: 99 KGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNP 156
Query: 354 --IMLSDFDLS 362
I + DF +
Sbjct: 157 ESIRICDFGFA 167
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 454 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA--TLYNVVGQPLRFP 511
T ++APE+++ +G+ +A D W+ G+ LY L G TPF + + +G +F
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSG-KFS 241
Query: 512 ES----PVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNW 556
S VS +A+DL+ L +P RL A + +HP+ V+W
Sbjct: 242 LSGGYWNSVSDTAKDLVSKXLHVDPHQRLT----AALVLRHPWI--VHW 284
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 236 GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFC 295
T FA+K++DK+ + +++ +L+ HP + TL ++ K+ +V E
Sbjct: 45 ATNMEFAVKIIDKSKRDPTEEI------EILLRYGQHPNIITLKDVYDDGKYVYVVTELM 98
Query: 296 PGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVL-VREDGH- 353
GG+L RQ K+FSE+ + + +EYLH G+V+RDLKP N+L V E G+
Sbjct: 99 KGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNP 156
Query: 354 --IMLSDFDLS 362
I + DF +
Sbjct: 157 ESIRICDFGFA 167
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA--TLYN 502
N M+ T ++APE+++ +G+ +A D W+ G+ LY +L G TPF + +
Sbjct: 174 NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILA 233
Query: 503 VVGQPLRFPES----PVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNW 556
+G +F S VS +A+DL+ +L +P RL A + +HP+ V+W
Sbjct: 234 RIGSG-KFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLT----AALVLRHPWI--VHW 284
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 12/128 (9%)
Query: 236 GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFC 295
T +A+KV+DK+ + +++ +L+ HP + TL ++ K LV E
Sbjct: 50 ATNMEYAVKVIDKSKRDPSEEI------EILLRYGQHPNIITLKDVYDDGKHVYLVTELM 103
Query: 296 PGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVL-VREDGH- 353
GG+L RQ K+FSE+ F + + +EYLH G+V+RDLKP N+L V E G+
Sbjct: 104 RGGELLDKILRQ--KFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNP 161
Query: 354 --IMLSDF 359
+ + DF
Sbjct: 162 ECLRICDF 169
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG--SENRATLYN 502
N M+ T ++APE++K +G+ D W+ GI LY +L G TPF S+ +
Sbjct: 179 NGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILT 238
Query: 503 VVGQ---PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF 550
+G L VS +A+DL+ +L +P RL A ++ QHP+
Sbjct: 239 RIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLT----AKQVLQHPW 285
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+ L+KLG G +VY T Y A+K + S E A E +++ L H
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPS--TAIREISLMKELKHEN 64
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPG---KYFSEQAVKFYVAEVLLALEYL 331
+ LY T+ LV EF + R G + VK++ ++L L +
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H I++RDLKP+N+L+ + G + L DF L+
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 443 PTNARSMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL- 500
P N S S V T Y AP+++ G + +++D W+ G L E++ GK F G+ + L
Sbjct: 161 PVNTFS-SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLK 219
Query: 501 --YNVVGQP 507
++++G P
Sbjct: 220 LIFDIMGTP 228
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE- 265
D VL + L + +G G V T FA+K++D A L +RE
Sbjct: 20 DDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREA 79
Query: 266 -ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVA 322
I L HP + L + +D +V EF G DL +++ G +SE Y+
Sbjct: 80 SICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 139
Query: 323 EVLLALEYLHMLGIVYRDLKPENVLV 348
++L AL Y H I++RD+KP VL+
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLL 165
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
VGT ++APE++K E +G VD W G+ L+ LL G PF G++ R + G+ P
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 255
Query: 512 -ESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWALIRCASPPEIPKP 570
+ +S SA+DL++ +L+ +P R+ E HP+ + + R A +P+
Sbjct: 256 RQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERD----RYAYKIHLPET 307
Query: 571 VEIVHSPAPALSTKAKAVAAGNADHNN 597
VE + K +AA ++ N
Sbjct: 308 VEQLRKFNARRKLKGAVLAAVSSHKFN 334
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Query: 241 FAMKVMDKASLEKRKKLLRAQTEREIL-QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGD 299
+A+K+++K + R ++ R E E L Q + + L FE D LV E GG
Sbjct: 41 YAVKIIEKQAGHSRSRVFR---EVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS 97
Query: 300 LHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGH---IML 356
+ Q+Q K+F+E+ V +V AL++LH GI +RDLKPEN+L + +
Sbjct: 98 ILAHIQKQ--KHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKI 155
Query: 357 SDFDL 361
DFDL
Sbjct: 156 CDFDL 160
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 26/123 (21%)
Query: 453 GTHEYLAPEII-----KGEGHGSAVDWWTFGIFLYELLFGKTPFKG------SENRATLY 501
G+ EY+APE++ + + D W+ G+ LY +L G PF G +R +
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 502 NVVGQPL---------RFPESPV--VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF 550
V L FP+ +S A+DLI LLV++ + RL+ A ++ QHP+
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLS----AAQVLQHPW 298
Query: 551 FQG 553
QG
Sbjct: 299 VQG 301
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 214 HFRLLKK-LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDH 272
H LL LG G +V+ T FA+KV + S + + E E+L+ L+H
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVLKKLNH 66
Query: 273 PFLPTLYTHFE--TDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALE 329
+ L+ E T + L+MEFCP G L+T+ + Y E + +V+ +
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 330 YLHMLGIVYRDLKPENVL--VREDGHIM--LSDF 359
+L GIV+R++KP N++ + EDG + L+DF
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 13/72 (18%)
Query: 449 MSFVGTHEYLAPEIIK--------GEGHGSAVDWWTFGIFLYELLFGKTPFKGSE----N 496
+ GT EYL P++ + + +G+ VD W+ G+ Y G PF+ E N
Sbjct: 173 VXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232
Query: 497 RATLYNVV-GQP 507
+ +Y ++ G+P
Sbjct: 233 KEVMYKIITGKP 244
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLDHPFL 275
L LG G +VY + T A+K + + K + REI LQ L HP +
Sbjct: 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 74
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
L F LV +F DL + + + +K Y+ L LEYLH
Sbjct: 75 IGLLDAFGHKSNISLVFDFMET-DLEVI-IKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 132
Query: 336 IVYRDLKPENVLVREDGHIMLSDFDLS 362
I++RDLKP N+L+ E+G + L+DF L+
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLA 159
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 69/173 (39%), Gaps = 45/173 (26%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF----KGSENRATLYNVVGQ 506
V T Y APE++ G +G VD W G L ELL + PF + ++ +G
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGT 231
Query: 507 PLR-----------------FPESPVVS-FSAR-----DLIKGLLVKEPQNRLACRRGAT 543
P FP P+ FSA DLI+GL + P R+ AT
Sbjct: 232 PTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT----AT 287
Query: 544 EIKQHPFFQGVNWALIRCASPP--EIPK---PVEIVHSPA-PALSTKAKAVAA 590
+ + +F R P ++P+ PVE + + PAL+ K K A
Sbjct: 288 QALKMKYFSN------RPGPTPGCQLPRPNCPVETLKEQSNPALAIKRKRTEA 334
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE- 265
D VL + L + +G G V T FA+K++D A L +RE
Sbjct: 18 DDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREA 77
Query: 266 -ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVA 322
I L HP + L + +D +V EF G DL +++ G +SE Y+
Sbjct: 78 SICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 323 EVLLALEYLHMLGIVYRDLKPENVLV 348
++L AL Y H I++RD+KP VL+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLL 163
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
VGT ++APE++K E +G VD W G+ L+ LL G PF G++ R + G+ P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 512 -ESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWALIRCASPPEIPKP 570
+ +S SA+DL++ +L+ +P R+ E HP+ + + R A +P+
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERD----RYAYKIHLPET 305
Query: 571 VEIVHSPAPALSTKAKAVAAGNADHNN 597
VE + K +AA ++ N
Sbjct: 306 VEQLRKFNARRKLKGAVLAAVSSHKFN 332
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 253 KRKKLLRAQT-------EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ 305
KR L + QT E + + HP + + YT F LVM+ GG + + +
Sbjct: 41 KRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIK 100
Query: 306 RQPGK------YFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
K E + + EVL LEYLH G ++RD+K N+L+ EDG + ++DF
Sbjct: 101 HIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADF 160
Query: 360 DLSLRCAVSPTVVKS 374
+S A + ++
Sbjct: 161 GVSAFLATGGDITRN 175
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 445 NARSMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF-KGSENRATLYN 502
N +FVGT ++APE+++ G+ D W+FGI EL G P+ K + +
Sbjct: 175 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT 234
Query: 503 VVGQPLRFPESPV--------VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+ P E+ V S R +I L K+P+ R A E+ +H FFQ
Sbjct: 235 LQNDPPSL-ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT----AAELLRHKFFQ 287
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G G VY + A+K + + + L E + + L H +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPL---HEEIALHKHLKHKNIVQYLG 86
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYLHMLGIVYR 339
F + F + ME PGG L L + + G +EQ + FY ++L L+YLH IV+R
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 340 DLKPENVLVRE-DGHIMLSDFDLSLRCA 366
D+K +NVL+ G + +SDF S R A
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLA 174
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 450 SFVGTHEYLAPEII-KG-EGHGSAVDWWTFGIFLYELLFGKTPF-KGSENRATLYNVVGQ 506
+F GT +Y+APEII KG G+G A D W+ G + E+ GK PF + E +A ++ VG
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-VGM 240
Query: 507 PLRFPESP-VVSFSARDLIKGLLVKEPQNRLAC 538
PE P +S A+ I +P R AC
Sbjct: 241 FKVHPEIPESMSAEAKAFILKCFEPDPDKR-AC 272
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLDH 272
++ L+K+G G G VY ++ + + + + + L+ + + + REI L+ L H
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGR----IVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
P + +L +++ LV EF L + + G + +K Y+ ++L + + H
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVAHCH 136
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
I++RDLKP+N+L+ DG + L+DF L+
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 33/133 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL---YNVVGQP 507
V T Y AP+++ G + + ++VD W+ G E++ GK F G + L ++++G P
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 508 -------------------LRFPESPVVSF------SARDLIKGLLVKEPQNRLACRRGA 542
F + P S DL+ +L +P R++ R
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299
Query: 543 TEIKQHPFFQGVN 555
HP+F+ ++
Sbjct: 300 N----HPYFKDLD 308
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QSLDH 272
+ +K +G G+ G L TK A+K +++ + + +REI+ +SL H
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA------IDENVQREIINHRSLRH 75
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
P + T ++ME+ GG+L+ R G+ FSE +F+ ++L + Y H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYE-RICNAGR-FSEDEARFFFQQLLSGVSYCH 133
Query: 333 MLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+ I +RDLK EN L+ DG + + DF S KSS L S+P
Sbjct: 134 SMQICHRDLKLENTLL--DGSPAPRLKICDFGYS----------KSSVLHSQP 174
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 450 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSEN----RATLYNVV 504
S VGT Y+APE++ + E G D W+ G+ LY +L G PF+ E R T+ ++
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 505 GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P+ +S LI + V +P R++ EIK H +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRIS----IPEIKTHSWF 278
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 253 KRKKLLRAQT-------EREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ 305
KR L + QT E + + HP + + YT F LVM+ GG + + +
Sbjct: 46 KRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIK 105
Query: 306 RQPGK------YFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
K E + + EVL LEYLH G ++RD+K N+L+ EDG + ++DF
Sbjct: 106 HIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADF 165
Query: 360 DLSLRCAVSPTVVKS 374
+S A + ++
Sbjct: 166 GVSAFLATGGDITRN 180
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 445 NARSMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF-KGSENRATLYN 502
N +FVGT ++APE+++ G+ D W+FGI EL G P+ K + +
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT 239
Query: 503 VVGQPLRFPESPV--------VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+ P E+ V S R +I L K+P+ R A E+ +H FFQ
Sbjct: 240 LQNDPPSL-ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT----AAELLRHKFFQ 292
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLDH 272
++ L+K+G G G VY ++ + + + + + L+ + + + REI L+ L H
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGR----IVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
P + +L +++ LV EF L + + G + +K Y+ ++L + + H
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVAHCH 136
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
I++RDLKP+N+L+ DG + L+DF L+
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 33/133 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL---YNVVGQP 507
V T Y AP+++ G + + ++VD W+ G E++ GK F G + L ++++G P
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 508 -------------------LRFPESPVVSF------SARDLIKGLLVKEPQNRLACRRGA 542
F + P S DL+ +L +P R++ R
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAM 299
Query: 543 TEIKQHPFFQGVN 555
HP+F+ ++
Sbjct: 300 N----HPYFKDLD 308
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 214 HFRLLKK-LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDH 272
H LL LG G +V+ T FA+KV + S + + E E+L+ L+H
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVLKKLNH 66
Query: 273 PFLPTLYTHFE--TDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALE 329
+ L+ E T + L+MEFCP G L+T+ + Y E + +V+ +
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 330 YLHMLGIVYRDLKPENVL--VREDGHIM--LSDF 359
+L GIV+R++KP N++ + EDG + L+DF
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 449 MSFVGTHEYLAPEIIK--------GEGHGSAVDWWTFGIFLYELLFGKTPFKGSE----N 496
+S GT EYL P++ + + +G+ VD W+ G+ Y G PF+ E N
Sbjct: 173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232
Query: 497 RATLYNVV-GQP 507
+ +Y ++ G+P
Sbjct: 233 KEVMYKIITGKP 244
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
LG G G VY + A+K + + + L E + + L H +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPL---HEEIALHKHLKHKNIVQYLG 72
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYLHMLGIVYR 339
F + F + ME PGG L L + + G +EQ + FY ++L L+YLH IV+R
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 340 DLKPENVLVRE-DGHIMLSDFDLSLRCA 366
D+K +NVL+ G + +SDF S R A
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLA 160
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 450 SFVGTHEYLAPEII-KG-EGHGSAVDWWTFGIFLYELLFGKTPF-KGSENRATLYNVVGQ 506
+F GT +Y+APEII KG G+G A D W+ G + E+ GK PF + E +A ++ VG
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-VGM 226
Query: 507 PLRFPESP-VVSFSARDLIKGLLVKEPQNRLAC 538
PE P +S A+ I +P R AC
Sbjct: 227 FKVHPEIPESMSAEAKAFILKCFEPDPDKR-AC 258
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 450 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSEN----RATLYNVV 504
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ E R T++ ++
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 505 GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P+ +S R LI + V +P R++ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QSLDH 272
+ L+K +G G+ G L + A+K ++ R + + +REI+ +SL H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRH 74
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
P + T +VME+ GG+L R G+ FSE +F+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 333 MLGIVYRDLKPENVLV 348
+ + +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 450 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSEN----RATLYNVV 504
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ E R T++ ++
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 505 GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P+ +S R LI + V +P R++ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QSLDH 272
+ L+K +G G+ G L + A+K ++ R + + A +REI+ +SL H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIAANVKREIINHRSLRH 74
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
P + T +VME+ GG+L R G+ FSE +F+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 333 MLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+ + +RDLK EN L+ DG + + DF S KSS L S+P
Sbjct: 133 AMQVCHRDLKLENTLL--DGSPAPRLKICDFGYS----------KSSVLHSQP 173
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 450 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSEN----RATLYNVV 504
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ E R T++ ++
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
Query: 505 GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P+ +S R LI + V +P R++ EI+ H +F
Sbjct: 234 NVQYAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 276
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QSLDH 272
+ L+K +G G+ G L + A+K ++ R + + +REI+ +SL H
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRH 73
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
P + T +VME+ GG+L R G+ FSE +F+ +++ + Y H
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYCH 131
Query: 333 MLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+ + +RDLK EN L+ DG + + DF S KSS L S+P
Sbjct: 132 AMQVCHRDLKLENTLL--DGSPAPRLKICDFGYS----------KSSVLHSQP 172
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 449 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT YL+PE+++ E +G VD W G+ LY LL G PF + +
Sbjct: 164 FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAY 223
Query: 509 RF--PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF 550
F PE V+ A++LI +L P R+ A E +HP+
Sbjct: 224 DFPSPEWDTVTPEAKNLINQMLTINPAKRIT----AHEALKHPW 263
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
++L + +G G V T +A K+++ L R + + E I + L H
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ-KLEREARICRLLKHSN 64
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L+ + F LV + GG+L +Y+SE + ++L A+ + H +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 335 GIVYRDLKPENVLVR---EDGHIMLSDFDLSL 363
G+V+RDLKPEN+L+ + + L+DF L++
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 18/243 (7%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDHPFL 275
L+ +G G GSV + + A+K + + SL ++ R E +L+ L H +
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKHENV 89
Query: 276 PTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
L F + FS ++ G DL+ + + Q S++ V+F V ++L L+Y
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQA---LSDEHVQFLVYQLLRGLKY 146
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTLESEPLRKNPVYC 389
+H GI++RDLKP NV V ED + + DF L+ + T V + + + N ++
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHY 206
Query: 390 VQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSM 449
Q I CI F S + K M +P PE++A+ ++ +
Sbjct: 207 NQTVDI----WSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 262
Query: 450 SFV 452
+++
Sbjct: 263 TYI 265
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ S L L +A + +V T Y APEI+ H VD W+ G
Sbjct: 158 KPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 480 FLYELLFGKTPFKGS---ENRATLYNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL GK F GS + + VVG P + + S AR I+ L
Sbjct: 218 IMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSL 268
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 449 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT YL+PE+++ + +G VD W G+ LY LL G PF + +
Sbjct: 182 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 241
Query: 509 RF--PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
F PE V+ A+DLI +L P R+ A E +HP+
Sbjct: 242 DFPSPEWDTVTPEAKDLINKMLTINPSKRIT----AAEALKHPWI 282
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 215 FRLLKKLGCGDIGSVY--LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDH 272
++L ++LG G V + L G + +A K+++ L R + + E I + L H
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQE--YAAKIINTKKLSARDHQ-KLEREARICRLLKH 80
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
P + L+ + L+ + GG+L +Y+SE + ++L A+ + H
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 333 MLGIVYRDLKPENVLVR---EDGHIMLSDFDLSL 363
+G+V+RDLKPEN+L+ + + L+DF L++
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI 172
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 450 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSEN----RATLYNVV 504
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ E R T++ ++
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 505 GQPLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P+ +S R LI + V +P R++ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QSLDH 272
+ L+K +G G+ G L A+K ++ R + + +REI+ +SL H
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIE------RGEKIDENVKREIINHRSLRH 74
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
P + T +VME+ GG+L R G+ FSE +F+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYAH 132
Query: 333 MLGIVYRDLKPENVLVREDG----HIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
+ + +RDLK EN L+ DG + ++DF S K+S L S+P
Sbjct: 133 AMQVAHRDLKLENTLL--DGSPAPRLKIADFGYS----------KASVLHSQP 173
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
F GT YL+PE+++ + +G VD W G+ LY LL G PF + + F
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 232
Query: 511 --PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE V+ A+DLI +L P R+ A E +HP+
Sbjct: 233 PSPEWDTVTPEAKDLINKMLTINPSKRIT----AAEALKHPWI 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 215 FRLLKKLGCGDIGSVY--LSELTGTKCYFAMKV-MDKASLEKRKKLLRAQTEREILQSLD 271
++L ++LG G V + L G + Y AM + K S +KL R E I + L
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQE-YAAMIINTKKLSARDHQKLER---EARICRLLK 68
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L+ + L+ + GG+L +Y+SE + ++L A+ +
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHC 126
Query: 332 HMLGIVYRDLKPENVLVR---EDGHIMLSDFDLSL 363
H +G+V+R+LKPEN+L+ + + L+DF L++
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 452 VGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSEN----RATLYNVVGQ 506
VGT Y+APE++ K E G D W+ G+ LY +L G PF+ E R T++ ++
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 507 PLRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P+ +S R LI + V +P R++ EI+ H +F
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREIL--QSLDH 272
+ L+K +G G+ G L + A+K ++ R + + +REI+ +SL H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRH 74
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
P + T +VME+ GG+L R G+ FSE +F+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 333 MLGIVYRDLKPENVLV 348
+ + +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 16/125 (12%)
Query: 241 FAMKVMDKASLEKRKKLLRAQTEREI--LQSLD-HPFLPTLYTHFETDKFSCLVMEFCPG 297
FA+K++ K + A T++EI L+ + HP + L+ F + LVME G
Sbjct: 39 FAVKIISKR--------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90
Query: 298 GDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDG---HI 354
G+L + + K+FSE + + +++ A+ ++H +G+V+RDLKPEN+L ++ I
Sbjct: 91 GEL--FERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEI 148
Query: 355 MLSDF 359
+ DF
Sbjct: 149 KIIDF 153
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 454 THEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPES 513
T Y APE++ G+ + D W+ G+ LY +L G+ PF+ + T + V + +
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 514 PV---------VSFSARDLIKGLLVKEPQNRL 536
VS A+DLI+GLL +P RL
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL 263
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--- 266
+ + + ++G G G+VY + + + A+K + + E+ L T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEG---LPISTVREVALL 57
Query: 267 --LQSLDHPFLPTLYTHFETDKFS-----CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF 319
L++ +HP + L T + LV E DL T + P + +K
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 320 YVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL----SLRCAVSPTVV 372
+ + L L++LH IV+RDLKPEN+LV G + L+DF L S + A++P VV
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV 173
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG---SENRATLYNVVGQP 507
V T Y APE++ + + VD W+ G E+ K F G ++ +++++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL-LRAQTEREILQSLDHPFLP 276
L KLG G +VY + T A+K + LE + A E +L+ L H +
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALK---EIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQP--GKYFSEQAVKFYVAEVLLALEYLHML 334
TL+ T+K LV E+ L+Q G + VK ++ ++L L Y H
Sbjct: 64 TLHDIIHTEKSLTLVFEYLDKD----LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT 370
+++RDLKP+N+L+ E G + L+DF L+ R PT
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLA-RAKSIPT 154
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 43/165 (26%)
Query: 424 KPKNEMGNQVSPLPELIAEPTNARSMSF--------VGTHEYLAPEIIKGE-GHGSAVDW 474
KP+N + N+ L +A+ AR+ S V T Y P+I+ G + + +D
Sbjct: 127 KPQNLLINERGELK--LADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDM 184
Query: 475 WTFGIFLYELLFGKTPFKGS---ENRATLYNVVGQP----------------LRFPE--- 512
W G YE+ G+ F GS E ++ ++G P +P+
Sbjct: 185 WGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRA 244
Query: 513 ------SPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
+P + DL+ LL E +NR++ A + +HPFF
Sbjct: 245 EALLSHAPRLDSDGADLLTKLLQFEGRNRIS----AEDAMKHPFF 285
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 63
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL T +K Y+ ++L L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F L+++G G G+VY + A+K M + + +K E LQ L HP
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ + + LVME+C G L + K E + L L YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
+++RD+K N+L+ E G + L DF
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDF 198
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGS---AVDWWTFGIFLYELLFGKTPFKGSEN 496
I P N FVGT ++APE+I G VD W+ GI EL K P
Sbjct: 203 IMAPAN----XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 258
Query: 497 RATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNR 535
+ LY++ +S S R+ + L K PQ+R
Sbjct: 259 MSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 297
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 33/141 (23%)
Query: 453 GTHEYLAPEIIKGEGHGSAV-----DWWTFGIFLYELLFGKTPFKG----------SENR 497
G+ EY+APE+++ +++ D W+ G+ LY LL G PF G E
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 498 ATLYNVVGQPLR-----FPESPV--VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF 550
N++ + ++ FP+ +S +A+DLI LLV++ + RL+ A ++ QHP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS----AAQVLQHPW 298
Query: 551 FQGVNWALIRCASPPEIPKPV 571
QG CA +P P+
Sbjct: 299 VQG-------CAPENTLPTPM 312
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 241 FAMKVMDKASLEKRKKLLRAQTEREIL-QSLDH-PFLPTLYTHFETDKFSCLVMEFCPGG 298
+A+K+++K R ++ R E E+L Q H L + E D+F LV E GG
Sbjct: 41 YAVKIIEKQPGHIRSRVFR---EVEMLYQCQGHRNVLELIEFFEEEDRFY-LVFEKMRGG 96
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGH---IM 355
+ L ++F+E V +V AL++LH GI +RDLKPEN+L +
Sbjct: 97 SI--LSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVK 154
Query: 356 LSDFDL 361
+ DFDL
Sbjct: 155 ICDFDL 160
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 18/243 (7%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDHPFL 275
L+ +G G GSV + + A+K + + SL ++ R E +L+ L H +
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKHENV 89
Query: 276 PTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
L F + FS ++ G DL+ + + Q S++ V+F V ++L L+Y
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LSDEHVQFLVYQLLRGLKY 146
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTLESEPLRKNPVYC 389
+H GI++RDLKP NV V ED + + DF L+ + T V + + + N ++
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHY 206
Query: 390 VQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSM 449
Q I CI F S + K M +P PE++A+ ++ +
Sbjct: 207 NQTVDI----WSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 262
Query: 450 SFV 452
+++
Sbjct: 263 TYI 265
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ S L L +A + +V T Y APEI+ H VD W+ G
Sbjct: 158 KPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 480 FLYELLFGKTPFKGS---ENRATLYNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL GK F GS + + VVG P + + S AR I+ L
Sbjct: 218 IMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSL 268
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 18/177 (10%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--- 266
+ + + ++G G G+VY + + + A+K + + E+ L T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEG---LPISTVREVALL 57
Query: 267 --LQSLDHPFLPTLYTHFETDKFS-----CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF 319
L++ +HP + L T + LV E DL T + P + +K
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 320 YVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL----SLRCAVSPTVV 372
+ + L L++LH IV+RDLKPEN+LV G + L+DF L S + A+ P VV
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV 173
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG---SENRATLYNVVGQP 507
V T Y APE++ + + VD W+ G E+ K F G ++ +++++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLDHPFL 275
L+K+G G G VY ++ + FA+K K LEK + + + T REI L+ L H +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGET-FALK---KIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
LY T K LV E DL L G S A K ++ ++L + Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTA-KSFLLQLLNGIAYCHDRR 120
Query: 336 IVYRDLKPENVLVREDGHIMLSDFDLS 362
+++RDLKP+N+L+ +G + ++DF L+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLDHPFL 275
L+K+G G G VY ++ + FA+K K LEK + + + T REI L+ L H +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGET-FALK---KIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
LY T K LV E DL L G S A K ++ ++L + Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTA-KSFLLQLLNGIAYCHDRR 120
Query: 336 IVYRDLKPENVLVREDGHIMLSDFDLS 362
+++RDLKP+N+L+ +G + ++DF L+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLDHPFL 275
L+K+G G G VY ++ + FA+K K LEK + + + T REI L+ L H +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGET-FALK---KIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
LY T K LV E DL L G S A K ++ ++L + Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTA-KSFLLQLLNGIAYCHDRR 120
Query: 336 IVYRDLKPENVLVREDGHIMLSDFDLS 362
+++RDLKP+N+L+ +G + ++DF L+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 33/141 (23%)
Query: 453 GTHEYLAPEIIKGEGHGSAV-----DWWTFGIFLYELLFGKTPFKG----------SENR 497
G+ EY+APE+++ +++ D W+ G+ LY LL G PF G E
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 498 ATLYNVVGQPLR-----FPESPV--VSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF 550
N++ + ++ FP+ +S +A+DLI LLV++ + RL+ A ++ QHP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS----AAQVLQHPW 298
Query: 551 FQGVNWALIRCASPPEIPKPV 571
QG CA +P P+
Sbjct: 299 VQG-------CAPENTLPTPM 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 241 FAMKVMDKASLEKRKKLLRAQTEREIL-QSLDH-PFLPTLYTHFETDKFSCLVMEFCPGG 298
+A+K+++K R ++ R E E+L Q H L + E D+F LV E GG
Sbjct: 41 YAVKIIEKQPGHIRSRVFR---EVEMLYQCQGHRNVLELIEFFEEEDRFY-LVFEKMRGG 96
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGH---IM 355
+ L ++F+E V +V AL++LH GI +RDLKPEN+L +
Sbjct: 97 SI--LSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVK 154
Query: 356 LSDFDL 361
+ DF L
Sbjct: 155 ICDFGL 160
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 63
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 153
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP----FLP 276
LG G G T MK + + E ++ L+ E ++++ L+HP F+
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK---EVKVMRCLEHPNVLKFIG 74
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY DK + E+ GG L + + +Y Q V F ++ + YLH + I
Sbjct: 75 VLYK----DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSF-AKDIASGMAYLHSMNI 129
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LVRE+ +++++DF L+
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLA 155
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL 485
+ +P + + VG ++APE+I G + VD ++FGI L E++
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 211 GVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQ 268
G+ +F+ ++K+G G G VY + T A+K K L+ + + + REI L+
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 57
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
L+HP + L T+ LV EF DL +K Y+ ++L L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
++L ++LG G V +A K+++ L R + + E I + L HP
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 91
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L+ + F LV + GG+L +Y+SE + ++L ++ ++H
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 335 GIVYRDLKPENVLVR---EDGHIMLSDFDLSL 363
IV+RDLKPEN+L+ + + L+DF L++
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 449 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT YL+PE+++ + +G VD W G+ LY LL G PF + +
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAY 250
Query: 509 RF--PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPF 550
F PE V+ A++LI +L P R+ A + +HP+
Sbjct: 251 DFPSPEWDTVTPEAKNLINQMLTINPAKRIT----ADQALKHPW 290
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 206 KDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE 265
K G+L F +++K+G G G V L + K Y+A+KV+ R + A ++
Sbjct: 28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKK 87
Query: 266 ILQSLDHPFLPTLYT-HFETDKFSCLVMEFCPGG-DLHTLRQRQPGKYFSEQAVKFYVAE 323
I + Y F CL+ E P G L+ + R F + +K Y E
Sbjct: 88 IQNDDINNNNIVKYHGKFMYYDHMCLIFE--PLGPSLYEIITRNNYNGFHIEDIKLYCIE 145
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVRE 350
+L AL YL + + + DLKPEN+L+ +
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDD 172
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
S + T +Y APE+I G + D W+FG L EL G F+ E+ L
Sbjct: 218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL 268
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 2/145 (1%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F L+++G G G+VY + A+K M + + +K E LQ L HP
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ + + LVME+C G L + K E + L L YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 335 GIVYRDLKPENVLVREDGHIMLSDF 359
+++RD+K N+L+ E G + L DF
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDF 159
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 440 IAEPTNARSMSFVGTHEYLAPEIIKGEGHGS---AVDWWTFGIFLYELLFGKTPFKGSEN 496
I P N FVGT ++APE+I G VD W+ GI EL K P
Sbjct: 164 IMAPAN----XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219
Query: 497 RATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNR 535
+ LY++ +S S R+ + L K PQ+R
Sbjct: 220 MSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 258
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 62
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 152
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 286 ----HPFFQDVT 293
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 61
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 423 QKPKN-EMGNQVSPLPE--LIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGI 479
QK +N ++ N++ + + L E MS G + ++APE+I+ D W++G+
Sbjct: 143 QKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGV 202
Query: 480 FLYELLFGKTPFKGSENRATLYNVVGQPLRFP 511
L+ELL G+ PF+G + A Y V L P
Sbjct: 203 LLWELLTGEVPFRGIDGLAVAYGVAMNKLALP 234
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYT 280
+G G G VY + G + D + + + + E ++ L HP + L
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDE-DISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 281 HFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH---MLGIV 337
+ CLVMEF GG L+ + GK + + ++ + YLH ++ I+
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPII 130
Query: 338 YRDLKPENVLVRE 350
+RDLK N+L+ +
Sbjct: 131 HRDLKSSNILILQ 143
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 61
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 18/177 (10%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--- 266
+ + + ++G G G+VY + + + A+K + + E+ L T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEG---LPISTVREVALL 57
Query: 267 --LQSLDHPFLPTLYTHFETDKFS-----CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF 319
L++ +HP + L T + LV E DL T + P + +K
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 320 YVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL----SLRCAVSPTVV 372
+ + L L++LH IV+RDLKPEN+LV G + L+DF L S + A+ P VV
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG---SENRATLYNVVGQP 507
V T Y APE++ + + VD W+ G E+ K F G ++ +++++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + + +LG G+ GSV L T A+K + + ++++ Q E +IL++
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILKA 68
Query: 270 LDHPFLPTL--YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
L F+ ++ + LVME+ P G L QR + + + + Y +++
Sbjct: 69 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL-LYSSQICKG 127
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+EYL V+RDL N+LV + H+ ++DF L+
Sbjct: 128 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 162
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + + +LG G+ GSV L T A+K + + ++++ Q E +IL++
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILKA 67
Query: 270 LDHPFLPTL--YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
L F+ ++ + LVME+ P G L QR + + + + Y +++
Sbjct: 68 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL-LYSSQICKG 126
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+EYL V+RDL N+LV + H+ ++DF L+
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 161
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + LG G G V + Y+A+K + + + EK +L +E +L SL+H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTIL---SEVMLLASLNHQY 63
Query: 275 LPTLYTHF-----------ETDKFSCLV--MEFCPGGDLHTLRQRQPGKYFSEQAVKFYV 321
+ Y + K S L ME+C G L+ L + ++ + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF- 122
Query: 322 AEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
++L AL Y+H GI++RDLKP N+ + E ++ + DF L+ S ++K L+S+
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK---LDSQN 179
Query: 382 L 382
L
Sbjct: 180 L 180
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFK-GSENRATLYNVVGQP 507
S +GT Y+A E++ G GH +D ++ GI +E+++ PF G E L +
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVS 245
Query: 508 LRFP 511
+ FP
Sbjct: 246 IEFP 249
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + + +LG G+ GSV L T A+K + + ++++ Q E +IL++
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILKA 80
Query: 270 LDHPFLPTL--YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
L F+ ++ + LVME+ P G L QR + + + + Y +++
Sbjct: 81 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL-LYSSQICKG 139
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+EYL V+RDL N+LV + H+ ++DF L+
Sbjct: 140 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 60
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRA-QTERE---------ILQ 268
K +G GD G V CY ++V + + K L+A TER+ I+
Sbjct: 55 KIIGSGDSGEV---------CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
DHP + L + + +V E+ G L T + G++ Q V + V +
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM-LRGVGAGM 164
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLR 383
YL LG V+RDL NVLV + +SDF LS P ++T P+R
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR 219
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
+ APE I SA D W+FG+ ++E+L +G+ P+ NR + +V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
K+G G G V+ T A+K ++ + K + A E +L+ L HP L L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKI-ALREIRMLKQLKHPNLVNLL 68
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
F + LV E+C LH L + Q G E VK + L A+ + H ++R
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVLHELDRYQRG--VPEHLVKSITWQTLQAVNFCHKHNCIHR 126
Query: 340 DLKPENVLVREDGHIMLSDF 359
D+KPEN+L+ + I L DF
Sbjct: 127 DVKPENILITKHSVIKLCDF 146
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 452 VGTHEYLAPEIIKGEG-HGSAVDWWTFGIFLYELLFGKTPFKGSEN-------RATLYNV 503
V T Y +PE++ G+ +G VD W G ELL G + G + R TL ++
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 504 V--------------GQPLRFPES--------PVVSFSARDLIKGLLVKEPQNRLACRRG 541
+ G + PE P +S+ A L+KG L +P RL C
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCE-- 280
Query: 542 ATEIKQHPFFQGV 554
++ HP+F+ +
Sbjct: 281 --QLLHHPYFENI 291
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ +K+G G G+VY + T A++ M+ K++ ++ E +++ +P
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPN 78
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ + +VME+ GG L + E + E L ALE+LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVVKSSTLESEPLRKNP 386
+++RD+K +N+L+ DG + L+DF CA ++P K ST+ P P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGF---CAQITPEQSKRSTMVGTPYWMAP 185
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 443 PTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYN 502
P ++ + VGT ++APE++ + +G VD W+ GI E++ G+ P+ LY
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 503 VV--GQP-LRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+ G P L+ PE F RD + L + + R A E+ QH F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLDMDVEK----RGSAKELLQHQFLK 274
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 18/243 (7%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDHPFL 275
L+ +G G GSV + + A+K + + SL ++ R E +L+ L H +
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR---ELRLLKHLKHENV 81
Query: 276 PTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
L F + FS ++ G DL+ + + Q S++ V+F V ++L L+Y
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LSDEHVQFLVYQLLRGLKY 138
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTLESEPLRKNPVYC 389
+H GI++RDLKP NV V ED + + DF L+ + T V + + + N ++
Sbjct: 139 IHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHY 198
Query: 390 VQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAEPTNARSM 449
Q I CI F S + K M +P PE++A+ ++ +
Sbjct: 199 NQTVDI----WSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 254
Query: 450 SFV 452
+++
Sbjct: 255 TYI 257
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A + +V T Y APEI+ H VD W+ G
Sbjct: 150 KPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 209
Query: 480 FLYELLFGKTPFKGS---ENRATLYNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL GK F GS + + VVG P + + S AR I+ L
Sbjct: 210 IMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSL 260
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRA-QTERE---------ILQ 268
K +G GD G V CY ++V + + K L+A TER+ I+
Sbjct: 55 KIIGSGDSGEV---------CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
DHP + L + + +V E+ G L T + G++ Q V + V +
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM-LRGVGAGM 164
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLR 383
YL LG V+RDL NVLV + +SDF LS P ++T P+R
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR 219
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
+ APE I SA D W+FG+ ++E+L +G+ P+ NR + +V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 264 REILQSLDHPFLPTLYTHFE-----TDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVK 318
R+ L + HP + ++ E D +VME+ G L +R G+
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL----KRSKGQKLPVAEAI 185
Query: 319 FYVAEVLLALEYLHMLGIVYRDLKPENVLVRED 351
Y+ E+L AL YLH +G+VY DLKPEN+++ E+
Sbjct: 186 AYLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 208 GVLGVG-HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
GVL VG +FR+ KK+GCG+ G + L + T Y A+K+ ++ R L + R
Sbjct: 3 GVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL---EPMKSRAPQLHLEY-RFY 58
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGG--DLHTLRQRQPGKYFSEQAVKFYVAEV 324
Q +P +Y K++ +V+E DL L R FS + V ++
Sbjct: 59 KQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQL 114
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGH-----IMLSDFDLS 362
+ +EY+H ++YRD+KPEN L+ G+ I + DF L+
Sbjct: 115 ISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 63
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 116
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 177 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 205
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNV 503
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 217 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 276
Query: 504 VGQPLR 509
+G P R
Sbjct: 277 LGTPTR 282
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 112
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNV 503
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 504 VGQPLR 509
+G P R
Sbjct: 273 LGTPTR 278
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 112
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNV 503
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 504 VGQPLR 509
+G P R
Sbjct: 273 LGTPTR 278
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 62
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 286 ----HPFFQDVT 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 67
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 171 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 231 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 291 ----HPFFQDVT 298
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 62
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 286 ----HPFFQDVT 293
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL-LRAQTEREILQSLDHP 273
+ L + LG G + V+L+ A+KV+ +A L + LR + E + +L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 274 FLPTLYTHFETDK----FSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
+ +Y E + +VME+ G L + + G ++A++ +A+ AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALN 130
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
+ H GI++RD+KP N+L+ + + DF ++ A S
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADS 169
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 440 IAEPTNA--RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENR 497
IA+ N+ ++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G
Sbjct: 166 IADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 498 ATLYNVVGQPLRFPESPVVSFSARDL---IKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
+ Y V + P + SA DL + L K P+NR + A E++
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSA-DLDAVVLKALAKNPENRY---QTAAEMR-------A 274
Query: 555 NWALIRCASPPEIPK 569
+ + PPE PK
Sbjct: 275 DLVRVHNGEPPEAPK 289
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 67
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 171 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 231 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 291 ----HPFFQDVT 298
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 114
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 175 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 203
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNV 503
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 215 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 274
Query: 504 VGQPLR 509
+G P R
Sbjct: 275 LGTPTR 280
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 63
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 6/156 (3%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI-- 266
++ + +F+ ++K+G G G VY + T A+K K L+ + + + REI
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 59
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
L+ L+HP + L T+ LV EF DL +K Y+ ++L
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L + H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 228 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 288 ----HPFFQDVT 295
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 64
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 228 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 288 ----HPFFQDVT 295
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 157
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 218 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 246
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNV 503
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 258 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 317
Query: 504 VGQPLR 509
+G P R
Sbjct: 318 LGTPTR 323
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 208 GVLGVG-HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
GVL VG +FR+ KK+GCG+ G + L + T Y A+K+ ++ R L + R
Sbjct: 3 GVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL---EPMKSRAPQLHLEY-RFY 58
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGG--DLHTLRQRQPGKYFSEQAVKFYVAEV 324
Q +P +Y K++ +V+E DL L R FS + V ++
Sbjct: 59 KQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQL 114
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGH-----IMLSDFDLS 362
+ +EY+H ++YRD+KPEN L+ G+ I + DF L+
Sbjct: 115 ISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 63
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 62
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 286 ----HPFFQDVT 293
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 106
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 167 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 195
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNV 503
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 207 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 266
Query: 504 VGQPLR 509
+G P R
Sbjct: 267 LGTPTR 272
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 60
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 9/170 (5%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
+ EA + K G L F + +LG G+ G V+ + A K++ LE K
Sbjct: 51 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEI-K 106
Query: 256 KLLRAQTERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
+R Q RE +L + P++ Y F +D + ME GG L + ++
Sbjct: 107 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIP 164
Query: 314 EQAVKFYVAEVLLALEYL-HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
EQ + V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 165 EQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
++ + SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 219 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 60
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPT 277
L ++G G G V+ T A+K M ++ ++ K + + +L+S D P++
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLD-VVLKSHDCPYIVQ 88
Query: 278 LYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL-HMLGI 336
+ F T+ + ME G L++R G K VA ++ AL YL G+
Sbjct: 89 CFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVA-IVKALYYLKEKHGV 146
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLSLR 364
++RD+KP N+L+ E G I L DF +S R
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGR 174
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 439 LIAEPTNARSMSFVGTHEYLAPEIIK-----GEGHGSAVDWWTFGIFLYELLFGKTPFKG 493
L+ + RS G Y+APE I + D W+ GI L EL G+ P+K
Sbjct: 175 LVDDKAKDRS---AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231
Query: 494 SENRATLYNVVGQ--PLRFPESPVVSFSARDLIKGLLVKEPQNR 535
+ + V Q P P S + +K L K+ + R
Sbjct: 232 CKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKR 275
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 208 GVLGVG-HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
GVL VG +FR+ KK+GCG+ G + L + T Y A+K+ ++ R L + R
Sbjct: 24 GVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL---EPMKSRAPQLHLEY-RFY 79
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGG--DLHTLRQRQPGKYFSEQAVKFYVAEV 324
Q +P +Y K++ +V+E DL L R FS + V ++
Sbjct: 80 KQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQL 135
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGH-----IMLSDFDLS 362
+ +EY+H ++YRD+KPEN L+ G+ I + DF L+
Sbjct: 136 ISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 61
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 88/207 (42%), Gaps = 34/207 (16%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF---ET-DKFS--CLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +L+ + H + L F ET D F+ LVM F G DL L + +
Sbjct: 70 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK---L 125
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS---------- 362
E ++F V ++L L Y+H GI++RDLKP N+ V ED + + DF L+
Sbjct: 126 GEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGX 185
Query: 363 --LRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEPSCI--------QPSCIAPTTCFS 412
R +P V+ + ++ + V C+ I + Q I T
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP 245
Query: 413 PRFFSKSKKAQKPKNEMGNQVSPLPEL 439
P F + ++ + KN M LPEL
Sbjct: 246 PAEFVQRLQSDEAKNYMKG----LPEL 268
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGI 479
KP N N+ L L +A ++ V T Y APE+I + VD W+ G
Sbjct: 155 KPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGC 214
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ E++ GKT FKGS++ L V G P + S A++ +KGL
Sbjct: 215 IMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGL 265
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 83
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 144 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 172
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF---KGSENRATLYNV 503
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 184 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 243
Query: 504 VGQPLR 509
+G P R
Sbjct: 244 LGTPTR 249
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + + +LG G+ GSV L T A+K + + ++++ Q E +IL++
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILKA 64
Query: 270 LDHPFLPTL--YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
L F+ ++ LVME+ P G L QR + + + + Y +++
Sbjct: 65 LHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLL-LYSSQICKG 123
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+EYL V+RDL N+LV + H+ ++DF L+
Sbjct: 124 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 158
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 61
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 90
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF---KGSENRATLYNV 503
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 504 VGQPLR 509
+G P R
Sbjct: 251 LGTPTR 256
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 61
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 59
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 60
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 60
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 59
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 59
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 59
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 60
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 32/129 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 544 EIKQHPFFQ 552
HPFFQ
Sbjct: 284 ----HPFFQ 288
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 269 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 323
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 324 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLA 410
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ KE
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 504
Query: 532 PQNR 535
P+ R
Sbjct: 505 PEER 508
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 60
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 164 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 60
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV EF DL +K Y+ ++L L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 86
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 147 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 175
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNV 503
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 246
Query: 504 VGQPLR 509
+G P R
Sbjct: 247 LGTPTR 252
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 97
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 158 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 186
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNV 503
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 257
Query: 504 VGQPLR 509
+G P R
Sbjct: 258 LGTPTR 263
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 90
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF---KGSENRATLYNV 503
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 504 VGQPLR 509
+G P R
Sbjct: 251 LGTPTR 256
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL-LRAQTEREILQSLDHP 273
+ L + LG G + V+L+ A+KV+ +A L + LR + E + +L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 274 FLPTLYTHFETDK----FSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
+ +Y E + +VME+ G L + + G ++A++ +A+ AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALN 130
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
+ H GI++RD+KP N+++ + + DF ++ A S
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 440 IAEPTNA--RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENR 497
IA+ N+ ++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
Query: 498 ATLYNVVGQPLRFPESPVVSFSARDL---IKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
+ Y V + P + SA DL + L K P+NR + A E++
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSA-DLDAVVLKALAKNPENRY---QTAAEMR-------A 274
Query: 555 NWALIRCASPPEIPK 569
+ + PPE PK
Sbjct: 275 DLVRVHNGEPPEAPK 289
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVR 349
LVM F + T Q+ G FSE+ +++ V ++L L+Y+H G+V+RDLKP N+ V
Sbjct: 124 LVMPF-----MQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 178
Query: 350 EDGHIMLSDFDLS 362
ED + + DF L+
Sbjct: 179 EDCELKILDFGLA 191
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 64/162 (39%), Gaps = 37/162 (22%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A +A +V T Y APE+I H VD W+ G
Sbjct: 171 KPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGC 230
Query: 480 FLYELLFGKTPFKGS---ENRATLYNVVGQP-----------------LRFPESPVVSFS 519
+ E+L GKT FKG + + V G P P++P F+
Sbjct: 231 IMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFT 290
Query: 520 ---------ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
A DL++ +L + RL + T HPFF+
Sbjct: 291 QLFPRASPQAADLLEKMLELDVDKRLTAAQALT----HPFFE 328
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL-LRAQTEREILQSLDHP 273
+ L + LG G + V+L+ A+KV+ +A L + LR + E + +L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 274 FLPTLYTHFETDK----FSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
+ +Y E + +VME+ G L + + G ++A++ +A+ AL
Sbjct: 73 AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALN 130
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
+ H GI++RD+KP N+++ + + DF ++ A S
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 440 IAEPTNA--RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENR 497
IA+ N+ ++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 498 ATLYNVVGQPLRFPESPVVSFSARDL---IKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
+ Y V + P + SA DL + L K P+NR + A E++
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSA-DLDAVVLKALAKNPENRY---QTAAEMR-------A 274
Query: 555 NWALIRCASPPEIPK 569
+ + PPE PK
Sbjct: 275 DLVRVHNGEPPEAPK 289
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 91
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 152 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 180
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNV 503
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 251
Query: 504 VGQPLR 509
+G P R
Sbjct: 252 LGTPTR 257
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMK----------VMDKASLEKRKKLLRAQTEREILQ 268
K+LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 376 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 426
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
LD+P++ + E + + LVME G L+ Q+ ++ ++ + V +V + +
Sbjct: 427 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGM 483
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
+YL V+RDL NVL+ + +SDF LS K+ T K PV
Sbjct: 484 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT-----HGKWPVK 538
Query: 389 CVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEM-GNQVSPLPE 438
P CI + + S + F + QKP M G++V+ + E
Sbjct: 539 WYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 587
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF---KGSENRATL 500
++ APE I S D W+FG+ ++E +G+ P+ KGSE A L
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 586
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL-LRAQTEREILQSLDHP 273
+ L + LG G + V+L+ A+KV+ +A L + LR + E + +L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 274 FLPTLYTHFETDK----FSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
+ +Y E + +VME+ G L + + G ++A++ +A+ AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALN 130
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
+ H GI++RD+KP N+++ + + DF ++ A S
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 440 IAEPTNA--RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENR 497
IA+ N+ ++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 498 ATLYNVVGQPLRFPESPVVSFSARDL---IKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
+ Y V + P + SA DL + L K P+NR + A E++
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSA-DLDAVVLKALAKNPENRY---QTAAEMR-------A 274
Query: 555 NWALIRCASPPEIPK 569
+ + PPE PK
Sbjct: 275 DLVRVHNGEPPEAPK 289
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K + + K ++L +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL-------QIMRKLDHCNIVRL 78
Query: 279 YTHFET------DKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF---KGSENRATLYNV 503
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 504 VGQPLR 509
+G P R
Sbjct: 239 LGTPTR 244
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 213 GHFRLLKKLGCGDIGSV--YLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSL 270
G + + ++LG G G V ++ + TG + A+K + K ++ R E +I++ L
Sbjct: 15 GPWEMKERLGTGGFGYVLRWIHQDTGEQ--VAIKQCRQELSPKNRE--RWCLEIQIMKKL 70
Query: 271 DHPFL------PTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQPGKYFSEQAVKFYVAE 323
+HP + P + L ME+C GGDL L Q + E ++ +++
Sbjct: 71 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 130
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVR 349
+ AL YLH I++RDLKPEN++++
Sbjct: 131 ISSALRYLHENRIIHRDLKPENIVLQ 156
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
FVGT +YLAPE+++ + + VD+W+FG +E + G PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 214 HFRLLKKLGCGDIGSVY--LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQS 269
+F+ ++K+G G G VY ++LTG + + K L+ + + + REI L+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTG-----EVVALXKIRLDTETEGVPSTAIREISLLKE 58
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+HP + L T+ LV EF DL +K Y+ ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 214 HFRLLKKLGCGDIGSVY--LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQS 269
+F+ ++K+G G G VY ++LTG + + K L+ + + + REI L+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTG-----EVVALXKIRLDTETEGVPSTAIREISLLKE 57
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L+HP + L T+ LV EF DL +K Y+ ++L L
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMK----------VMDKASLEKRKKLLRAQTEREILQ 268
K+LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 375 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 425
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
LD+P++ + E + + LVME G L+ Q+ ++ ++ + V +V + +
Sbjct: 426 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGM 482
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
+YL V+RDL NVL+ + +SDF LS K+ T K PV
Sbjct: 483 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT-----HGKWPVK 537
Query: 389 CVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEM-GNQVSPLPE 438
P CI + + S + F + QKP M G++V+ + E
Sbjct: 538 WYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF---KGSENRATL 500
++ APE I S D W+FG+ ++E +G+ P+ KGSE A L
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 585
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 78
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF---KGSENRATLYNV 503
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 504 VGQPLR 509
+G P R
Sbjct: 239 LGTPTR 244
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL-LRAQTEREILQSLDHP 273
+ L + LG G + V+L+ A+KV+ +A L + LR + E + +L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 274 FLPTLYTHFETDK----FSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
+ +Y E + +VME+ G L + + G ++A++ +A+ AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALN 130
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
+ H GI++RD+KP N+++ + + DF ++ A S
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 440 IAEPTNA--RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENR 497
IA+ N+ ++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 498 ATLYNVVGQPLRFPESPVVSFSARDL---IKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
+ Y V + P + SA DL + L K P+NR + A E++
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSA-DLDAVVLKALAKNPENRY---QTAAEMR-------A 274
Query: 555 NWALIRCASPPEIPK 569
+ + PPE PK
Sbjct: 275 DLVRVHNGEPPEAPK 289
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 59
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV E DL T +K Y+ ++L L +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 213 GHFRLLKKLGCGDIGSV--YLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSL 270
G + + ++LG G G V ++ + TG + A+K + K ++ R E +I++ L
Sbjct: 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQ--VAIKQCRQELSPKNRE--RWCLEIQIMKKL 69
Query: 271 DHPFL------PTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQPGKYFSEQAVKFYVAE 323
+HP + P + L ME+C GGDL L Q + E ++ +++
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 129
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVR 349
+ AL YLH I++RDLKPEN++++
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQ 155
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
FVGT +YLAPE+++ + + VD+W+FG +E + G PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 78
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF---KGSENRATLYNV 503
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 504 VGQPLR 509
+G P R
Sbjct: 239 LGTPTR 244
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 78
Query: 279 YTHFET------DKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF---KGSENRATLYNV 503
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 504 VGQPLR 509
+G P R
Sbjct: 239 LGTPTR 244
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 82
Query: 279 YTHFET------DKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 143 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 171
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF---KGSENRATLYNV 503
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 242
Query: 504 VGQPLR 509
+G P R
Sbjct: 243 LGTPTR 248
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 79
Query: 279 YTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 140 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 168
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNV 503
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 239
Query: 504 VGQPLR 509
+G P R
Sbjct: 240 LGTPTR 245
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Query: 198 EAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL 257
EA + K G L F + +LG G+ G V + + A K++ LE K
Sbjct: 1 EAFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLI---HLEI-KPA 56
Query: 258 LRAQTERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQ 315
+R Q RE +L + P++ Y F +D + ME GG L + + K E+
Sbjct: 57 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEE 114
Query: 316 AVKFYVAEVLLALEYL-HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ VL L YL I++RD+KP N+LV G I L DF +S
Sbjct: 115 ILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
++ + SFVGT Y+APE ++G + D W+ G+ L EL G+ P
Sbjct: 167 DSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVR 349
LVM F + T Q+ G FSE+ +++ V ++L L+Y+H G+V+RDLKP N+ V
Sbjct: 106 LVMPF-----MQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 160
Query: 350 EDGHIMLSDFDLS 362
ED + + DF L+
Sbjct: 161 EDCELKILDFGLA 173
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 64/162 (39%), Gaps = 37/162 (22%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A +A +V T Y APE+I H VD W+ G
Sbjct: 153 KPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGC 212
Query: 480 FLYELLFGKTPFKGS---ENRATLYNVVGQP-----------------LRFPESPVVSFS 519
+ E+L GKT FKG + + V G P P++P F+
Sbjct: 213 IMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFT 272
Query: 520 ---------ARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
A DL++ +L + RL + T HPFF+
Sbjct: 273 QLFPRASPQAADLLEKMLELDVDKRLTAAQALT----HPFFE 310
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 198 EAIQAVRVKDGVLGVGH----FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEK 253
E ++ +R+ ++ VG + +K+G G G+VY + T A++ M+ K
Sbjct: 5 EILEKLRI---IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK 61
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
++ ++ E +++ +P + + +VME+ GG L +
Sbjct: 62 KELII---NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMD 115
Query: 314 EQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVV 372
E + E L ALE+LH +++R++K +N+L+ DG + L+DF CA ++P
Sbjct: 116 EGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGF---CAQITPEQS 172
Query: 373 KSSTLESEPLRKNP 386
K ST+ P P
Sbjct: 173 KRSTMVGTPYWMAP 186
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 443 PTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYN 502
P ++ + VGT ++APE++ + +G VD W+ GI E++ G+ P+ LY
Sbjct: 169 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 503 VV--GQP-LRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWALI 559
+ G P L+ PE F RD + L + + R A E+ QH F +
Sbjct: 229 IATNGTPELQNPEKLSAIF--RDFLNRCLEMDVEK----RGSAKELIQHQFLK------- 275
Query: 560 RCASPPEIPKPVEIVHSPAPALSTKAKAVAAGNADHNNYLE 600
I KP + S P ++ AA A NN+LE
Sbjct: 276 -------IAKP---LSSLTPLIA------AAKEATKNNHLE 300
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K K +KR K E +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFK----NRELQIMRKLDHCNIVRL 78
Query: 279 YTHFETDK------FSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF---KGSENRATLYNV 503
++S + + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 504 VGQPLR 509
+G P R
Sbjct: 239 LGTPTR 244
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ +K+G G G+VY + T A++ M+ K++ ++ E +++ +P
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPN 78
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ + +VME+ GG L + E + E L ALE+LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVVKSSTLESEPLRKNP 386
+++RD+K +N+L+ DG + L+DF CA ++P K S + P P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGF---CAQITPEQSKRSXMVGTPYWMAP 185
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 443 PTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYN 502
P ++ VGT ++APE++ + +G VD W+ GI E++ G+ P+ LY
Sbjct: 168 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 503 VV--GQP-LRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+ G P L+ PE F RD + L + + R A E+ QH F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLEMDVEK----RGSAKELLQHQFLK 274
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K + + K ++L +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL-------QIMRKLDHCNIVRL 78
Query: 279 YTHFET------DKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF---KGSENRATLYNV 503
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 504 VGQPLR 509
+G P R
Sbjct: 239 LGTPTR 244
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 WEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKA--SLEKR 254
++ I+ V V D + + H +G G G VYL+ T+ A+K +++ L
Sbjct: 16 FQGIKNVHVPDNYI-IKHL-----IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDC 69
Query: 255 KKLLRAQTEREILQSLDHPFLPTLYTHFETD---KFSCL--VMEFCPGGDLHTLRQRQPG 309
K++LR T IL L ++ LY D KF L V+E DL L +
Sbjct: 70 KRILREIT---ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLFK--TP 123
Query: 310 KYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +E+ +K + +LL ++H GI++RDLKP N L+ +D + + DF L+
Sbjct: 124 IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ +K+G G G+VY + T A++ M+ K++ ++ E +++ +P
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPN 78
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ + +VME+ GG L + E + E L ALE+LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVVKSSTLESEPLRKNP 386
+++RD+K +N+L+ DG + L+DF CA ++P K S + P P
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGF---CAQITPEQSKRSEMVGTPYWMAP 185
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 443 PTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYN 502
P ++ VGT ++APE++ + +G VD W+ GI E++ G+ P+ LY
Sbjct: 168 PEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 503 VV--GQP-LRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+ G P L+ PE F RD + L + + R A E+ QH F +
Sbjct: 228 IATNGTPELQNPEKLSAIF--RDFLNRCLDMDVEK----RGSAKELLQHQFLK 274
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 91/182 (50%), Gaps = 18/182 (9%)
Query: 206 KDGVLGVGH-FRLLKKLGCGDIGSVYLS-ELTGTKCYFAMKVMDKASLEKRKKLLRAQTE 263
KDG+ + + ++G G G V+ + +L + A+K + ++ ++ + T
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALK---RVRVQTGEEGMPLSTI 59
Query: 264 REI-----LQSLDHPFLPTLY---THFETDKFSCLVMEF-CPGGDLHTLRQRQPGKYFSE 314
RE+ L++ +HP + L+ T TD+ + L + F DL T + P
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 119
Query: 315 QAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL----SLRCAVSPT 370
+ +K + ++L L++LH +V+RDLKP+N+LV G I L+DF L S + A++
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 179
Query: 371 VV 372
VV
Sbjct: 180 VV 181
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 25/133 (18%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNVVGQ 506
S V T Y APE++ + + VD W+ G E+ K F+GS + + +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 507 P--------LRFPESPVVSFSAR----------DLIKGLLVKEPQNRLACRRGATEIKQH 548
P + P S SA+ +L K LL+K A R A H
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297
Query: 549 PFFQGVNWALIRC 561
P+FQ + RC
Sbjct: 298 PYFQDLE----RC 306
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 220 KLGCGDIGSVYLSE--LTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPT 277
+LG G G V+ E TG +C A + R ++ RA+ E L P +
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQC---------AVKKVRLEVFRAE-ELMACAGLTSPRIVP 130
Query: 278 LYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIV 337
LY + + ME GG L L + Q E +Y+ + L LEYLH I+
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRIL 188
Query: 338 YRDLKPENVLVREDG-HIMLSDF 359
+ D+K +NVL+ DG H L DF
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDF 211
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPE 512
GT ++APE++ G + VD W+ + +L G P+ + +P E
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 293
Query: 513 SP--VVSFSARDLIKGLLVKEPQNRLA 537
P +A+ + +GL KEP +R++
Sbjct: 294 IPPSCAPLTAQAIQEGLR-KEPIHRVS 319
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 23/185 (12%)
Query: 199 AIQAVRVKDGVLGVG-HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKA--SLEKRK 255
A+ R D VG + +++ +G G G V + T A+K + A + K
Sbjct: 40 ALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK 99
Query: 256 KLLRAQTEREILQSLDHPFL--------PTL-YTHFETDKFSCLVMEFCPGGDLH-TLRQ 305
+ LR E +IL+ H + PT+ Y F++ +ME DLH +
Sbjct: 100 RTLR---ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHS 152
Query: 306 RQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
QP + + V++++ ++L L+Y+H +++RDLKP N+LV E+ + + DF ++
Sbjct: 153 SQP---LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
Query: 366 AVSPT 370
SP
Sbjct: 210 CTSPA 214
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
+LG G G V+ E T A+K + R ++ RA+ E L P + LY
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAE-ELMACAGLTSPRIVPLY 151
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ + ME GG L L + Q E +Y+ + L LEYLH I++
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 209
Query: 340 DLKPENVLVREDG-HIMLSDF 359
D+K +NVL+ DG H L DF
Sbjct: 210 DVKADNVLLSSDGSHAALCDF 230
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPE 512
GT ++APE++ G + VD W+ + +L G P+ + +P E
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 312
Query: 513 SP--VVSFSARDLIKGLLVKEPQNRLA 537
P +A+ + +GL KEP +R++
Sbjct: 313 IPPSCAPLTAQAIQEGLR-KEPIHRVS 338
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G VY ++L + A+K + + K ++L +I++ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL-------QIMRKLDHCNIVRL 78
Query: 279 YTHFET------DKFSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + + + LV+++ P R K VK Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 332 HMLGIVYRDLKPENVLVREDGHIM-LSDF 359
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPF---KGSENRATLYNV 503
++S++ + Y APE+I G + S++D W+ G L ELL G+ F G + + V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 504 VGQPLR 509
+G P R
Sbjct: 239 LGTPTR 244
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPT 277
+K+G G G+VY + T A++ M+ K++ ++ E +++ +P +
Sbjct: 26 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII---NEILVMRENKNPNIVN 82
Query: 278 LYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIV 337
+ +VME+ GG L + E + E L ALE+LH ++
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVI 139
Query: 338 YRDLKPENVLVREDGHIMLSDFDLSLRCA-VSPTVVKSSTLESEPLRKNP 386
+RD+K +N+L+ DG + L+DF CA ++P K S + P P
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGF---CAQITPEQSKRSXMVGTPYWMAP 186
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
Query: 443 PTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYN 502
P ++ VGT ++APE++ + +G VD W+ GI E++ G+ P+ LY
Sbjct: 169 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 503 VV--GQP-LRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWALI 559
+ G P L+ PE F RD + L + + R A E+ QH F +
Sbjct: 229 IATNGTPELQNPEKLSAIF--RDFLNRCLEMDVEK----RGSAKELIQHQFLK------- 275
Query: 560 RCASPPEIPKPVEIVHSPAPALSTKAKAVAAGNADHNNYLE 600
I KP + S P ++ AA A NN+LE
Sbjct: 276 -------IAKP---LSSLTPLIA------AAKEATKNNHLE 300
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL-LRAQTEREILQSLDHP 273
+ L + LG G + V+L+ A+KV+ +A L + LR + E + +L+HP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 89
Query: 274 FLPTLYTHFETDK----FSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
+ +Y E + +VME+ G L + + G ++A++ +A+ AL
Sbjct: 90 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALN 147
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
+ H GI++RD+KP N+++ + + DF ++ A S
Sbjct: 148 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 440 IAEPTNA--RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENR 497
IA+ N+ ++ + +GT +YL+PE +G+ + D ++ G LYE+L G+ PF G
Sbjct: 183 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
Query: 498 ATLYNVVGQPLRFPESPVVSFSARDL---IKGLLVKEPQNR 535
+ Y V + P + SA DL + L K P+NR
Sbjct: 243 SVAYQHVREDPIPPSARHEGLSA-DLDAVVLKALAKNPENR 282
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 248 KASLEKRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQ 307
+A+++K +LLR + ++Q +D LY E + +VME+C G + +
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVD-----VLYN--EEKQKMYMVMEYCVCG-MQEMLDSV 101
Query: 308 PGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLS 357
P K F Y +++ LEYLH GIV++D+KP N+L+ G + +S
Sbjct: 102 PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKIS 151
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 15/121 (12%)
Query: 453 GTHEYLAPEIIKGEG--HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF 510
G+ + PEI G G VD W+ G+ LY + G PF+G N+
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI 232
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVNWALIRCASPPEIPKP 570
P S DL+KG+L EP R + R +I+QH +F+ + P E P P
Sbjct: 233 PGDCGPPLS--DLLKGMLEYEPAKRFSIR----QIRQHSWFR-------KKHPPAEAPVP 279
Query: 571 V 571
+
Sbjct: 280 I 280
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLD 271
+F+ ++K+G G G VY + T A+K K L+ + + + REI L+ L+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 63
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L T+ LV E DL +K Y+ ++L L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 32/132 (24%)
Query: 452 VGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV---VGQP 507
V T Y APEI+ G + + +AVD W+ G E++ + F G L+ + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 508 LR---------------FPESPVVSFS---------ARDLIKGLLVKEPQNRLACRRGAT 543
FP+ FS R L+ +L +P R++ +
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 544 EIKQHPFFQGVN 555
HPFFQ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +VME+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 532 PQNR 535
P+ R
Sbjct: 256 PEER 259
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 220 KLGCGDIGSVY--LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPT 277
+LGCG+ GSV + + + A+KV+ + + ++ E +I+ LD+P++
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVR 74
Query: 278 LYTHFETDKFSCLVMEFCPGGDLHTL----RQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L + + LVME GG LH R+ P +E + +V + ++YL
Sbjct: 75 LIGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAE-----LLHQVSMGMKYLEE 128
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCV 390
V+RDL NVL+ + +SDF LS + + + PL+ C+
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 185
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFK 492
++ APE I S D W++G+ ++E L +G+ P+K
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 215
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 21/181 (11%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + LG G G V + Y+A+K + + + EK +L +E +L SL+H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTIL---SEVMLLASLNHQY 63
Query: 275 LPTLYTHF-----------ETDKFSCLV--MEFCPGGDLHTLRQRQPGKYFSEQAVKFYV 321
+ Y + K S L ME+C L+ L + ++ + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF- 122
Query: 322 AEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
++L AL Y+H GI++RDLKP N+ + E ++ + DF L+ S ++K L+S+
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK---LDSQN 179
Query: 382 L 382
L
Sbjct: 180 L 180
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFK-GSENRATLYNVVGQP 507
S +GT Y+A E++ G GH +D ++ GI +E+++ PF G E L +
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVS 245
Query: 508 LRFP 511
+ FP
Sbjct: 246 IEFP 249
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 10 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 64
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 65 LVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADFGLA 151
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ KE
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 245
Query: 532 PQNR 535
P+ R
Sbjct: 246 PEER 249
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 91/182 (50%), Gaps = 18/182 (9%)
Query: 206 KDGVLGVGH-FRLLKKLGCGDIGSVYLS-ELTGTKCYFAMKVMDKASLEKRKKLLRAQTE 263
KDG+ + + ++G G G V+ + +L + A+K + ++ ++ + T
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALK---RVRVQTGEEGMPLSTI 59
Query: 264 REI-----LQSLDHPFLPTLY---THFETDKFSCLVMEF-CPGGDLHTLRQRQPGKYFSE 314
RE+ L++ +HP + L+ T TD+ + L + F DL T + P
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 119
Query: 315 QAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL----SLRCAVSPT 370
+ +K + ++L L++LH +V+RDLKP+N+LV G I L+DF L S + A++
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 179
Query: 371 VV 372
VV
Sbjct: 180 VV 181
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 21/124 (16%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNVVGQ 506
S V T Y APE++ + + VD W+ G E+ K F+GS + + +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 507 P--------LRFPESPVVSFSAR----------DLIKGLLVKEPQNRLACRRGATEIKQH 548
P + P S SA+ +L K LL+K A R A H
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297
Query: 549 PFFQ 552
P+FQ
Sbjct: 298 PYFQ 301
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V+E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 532 PQNR 535
P+ R
Sbjct: 256 PEER 259
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 91/182 (50%), Gaps = 18/182 (9%)
Query: 206 KDGVLGVGH-FRLLKKLGCGDIGSVYLS-ELTGTKCYFAMKVMDKASLEKRKKLLRAQTE 263
KDG+ + + ++G G G V+ + +L + A+K + ++ ++ + T
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALK---RVRVQTGEEGMPLSTI 59
Query: 264 REI-----LQSLDHPFLPTLY---THFETDKFSCLVMEF-CPGGDLHTLRQRQPGKYFSE 314
RE+ L++ +HP + L+ T TD+ + L + F DL T + P
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT 119
Query: 315 QAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL----SLRCAVSPT 370
+ +K + ++L L++LH +V+RDLKP+N+LV G I L+DF L S + A++
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 179
Query: 371 VV 372
VV
Sbjct: 180 VV 181
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 54/133 (40%), Gaps = 25/133 (18%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNVVGQ 506
S V T Y APE++ + + VD W+ G E+ K F+GS + + +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 507 P--------LRFPESPVVSFSAR----------DLIKGLLVKEPQNRLACRRGATEIKQH 548
P + P S SA+ +L K LL+K A R A H
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297
Query: 549 PFFQGVNWALIRC 561
P+FQ + RC
Sbjct: 298 PYFQDLE----RC 306
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 9/170 (5%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
+ EA + K G L F + +LG G+ G V+ + A K++ LE K
Sbjct: 16 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEI-K 71
Query: 256 KLLRAQTERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
+R Q RE +L + P++ Y F +D + ME GG L + ++
Sbjct: 72 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIP 129
Query: 314 EQAVKFYVAEVLLALEYL-HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
EQ + V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 130 EQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
++ + SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 183 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V+E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 532 PQNR 535
P+ R
Sbjct: 256 PEER 259
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 532 PQNR 535
P+ R
Sbjct: 422 PEER 425
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 532 PQNR 535
P+ R
Sbjct: 422 PEER 425
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 215 FRLLKKLGCGDIGSVY--LSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSL 270
F L+K+G G+ GSV+ + L G C +A+K K A + LR +L
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDG--CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ- 69
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTL--RQRQPGKYFSEQAVKFYVAEVLLAL 328
H + ++ + D + E+C GG L + YF E +K + +V L
Sbjct: 70 -HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 329 EYLHMLGIVYRDLKPENVLV 348
Y+H + +V+ D+KP N+ +
Sbjct: 129 RYIHSMSLVHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 215 FRLLKKLGCGDIGSVY--LSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSL 270
F L+K+G G+ GSV+ + L G C +A+K K A + LR +L
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDG--CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ- 67
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTL--RQRQPGKYFSEQAVKFYVAEVLLAL 328
H + ++ + D + E+C GG L + YF E +K + +V L
Sbjct: 68 -HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 329 EYLHMLGIVYRDLKPENVLV 348
Y+H + +V+ D+KP N+ +
Sbjct: 127 RYIHSMSLVHMDIKPSNIFI 146
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 13 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 67
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 68 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADFGLA 154
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ KE
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 248
Query: 532 PQNR 535
P+ R
Sbjct: 249 PEER 252
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 215 FRLLKKLGCGDIGSVY--LSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSL 270
F L+K+G G+ GSV+ + L G C +A+K K A + LR +L
Sbjct: 9 FHELEKIGSGEFGSVFKCVKRLDG--CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ- 65
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTL--RQRQPGKYFSEQAVKFYVAEVLLAL 328
H + ++ + D + E+C GG L + YF E +K + +V L
Sbjct: 66 -HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 329 EYLHMLGIVYRDLKPENVLV 348
Y+H + +V+ D+KP N+ +
Sbjct: 125 RYIHSMSLVHMDIKPSNIFI 144
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 215 FRLLKKLGCGDIGSVY--LSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSL 270
F L+K+G G+ GSV+ + L G C +A+K K A + LR +L
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDG--CIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ- 67
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTL--RQRQPGKYFSEQAVKFYVAEVLLAL 328
H + ++ + D + E+C GG L + YF E +K + +V L
Sbjct: 68 -HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 329 EYLHMLGIVYRDLKPENVLV 348
Y+H + +V+ D+KP N+ +
Sbjct: 127 RYIHSMSLVHMDIKPSNIFI 146
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 23/185 (12%)
Query: 199 AIQAVRVKDGVLGVG-HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKA--SLEKRK 255
A+ R D VG + +++ +G G G V + T A+K + A + K
Sbjct: 39 ALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK 98
Query: 256 KLLRAQTEREILQSLDHPFL--------PTL-YTHFETDKFSCLVMEFCPGGDLH-TLRQ 305
+ LR E +IL+ H + PT+ Y F++ +ME DLH +
Sbjct: 99 RTLR---ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHS 151
Query: 306 RQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
QP + + V++++ ++L L+Y+H +++RDLKP N+LV E+ + + DF ++
Sbjct: 152 SQP---LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
Query: 366 AVSPT 370
SP
Sbjct: 209 CTSPA 213
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASL-EKRKKLLRAQTEREILQSLDHP 273
+ +L +G G G K +D S+ E K++L +E +L+ L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML--VSEVNLLRELKHP 65
Query: 274 FLPTLYTHF--ETDKFSCLVMEFCPGGDLHTL-----RQRQPGKYFSEQAVKFYVAEVLL 326
+ Y T+ +VME+C GGDL ++ ++RQ Y E+ V + ++ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ---YLDEEFVLRVMTQLTL 122
Query: 327 ALEYLHMLG-----IVYRDLKPENVLVREDGHIMLSDFDLS 362
AL+ H +++RDLKP NV + ++ L DF L+
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
+FVGT Y++PE + + D W+ G LYEL PF
Sbjct: 175 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASL-EKRKKLLRAQTEREILQSLDHP 273
+ +L +G G G K +D S+ E K++L +E +L+ L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML--VSEVNLLRELKHP 65
Query: 274 FLPTLYTHF--ETDKFSCLVMEFCPGGDLHTL-----RQRQPGKYFSEQAVKFYVAEVLL 326
+ Y T+ +VME+C GGDL ++ ++RQ Y E+ V + ++ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ---YLDEEFVLRVMTQLTL 122
Query: 327 ALEYLHMLG-----IVYRDLKPENVLVREDGHIMLSDFDLS 362
AL+ H +++RDLKP NV + ++ L DF L+
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
+FVGT Y++PE + + D W+ G LYEL PF
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 220 KLGCGDIGSVY--LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPT 277
+LGCG+ GSV + + + A+KV+ + + ++ E +I+ LD+P++
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVR 400
Query: 278 LYTHFETDKFSCLVMEFCPGGDLHTL----RQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L + + LVME GG LH R+ P +E + +V + ++YL
Sbjct: 401 LIGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAE-----LLHQVSMGMKYLEE 454
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQ 391
V+R+L NVL+ + +SDF LS + + + PL+ C+
Sbjct: 455 KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 512
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFK 492
++ APE I S D W++G+ ++E L +G+ P+K
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 541
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMK----------VMDKASLEKRKKLLRAQTEREILQ 268
K+LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 31 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 81
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
LD+P++ + E + + LVME G L+ + Q ++ ++ + V +V + +
Sbjct: 82 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGM 138
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
+YL V+RDL NVL+ + +SDF LS K+ T K PV
Sbjct: 139 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT-----HGKWPVK 193
Query: 389 CVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEM-GNQVSPLPE 438
P CI + + S + F + QKP M G++V+ + E
Sbjct: 194 WYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF---KGSENRATL 500
++ APE I S D W+FG+ ++E +G+ P+ KGSE A L
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 241
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 6/172 (3%)
Query: 215 FRLLKKLGCGDIGSVYLSELT---GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
++ + +G G+ G V L A+K + EK+++ E I+ D
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLC--EASIMGQFD 102
Query: 272 HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
HP + L K +V+EF G L ++ G++ Q V + + + YL
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGM-LRGIAAGMRYL 161
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLR 383
+G V+RDL N+LV + +SDF LS P V ++T P+R
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR 213
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE I+ SA D W++GI ++E++ +G+ P+ N+ + + + R P
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 268
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 70
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+MEF P G L Q+ + + ++ Y ++
Sbjct: 71 LQHDNI----VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ-YTSQ 125
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASL-EKRKKLLRAQTEREILQSLDHP 273
+ +L +G G G K +D S+ E K++L +E +L+ L HP
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML--VSEVNLLRELKHP 65
Query: 274 FLPTLYTHF--ETDKFSCLVMEFCPGGDLHTL-----RQRQPGKYFSEQAVKFYVAEVLL 326
+ Y T+ +VME+C GGDL ++ ++RQ Y E+ V + ++ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ---YLDEEFVLRVMTQLTL 122
Query: 327 ALEYLHMLG-----IVYRDLKPENVLVREDGHIMLSDFDLS 362
AL+ H +++RDLKP NV + ++ L DF L+
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
FVGT Y++PE + + D W+ G LYEL PF
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 217 LLKKLGCGDIGSVYLSELT---GTKCYFAMKVMDK-ASLEKRKKLLRAQTEREILQSLDH 272
L + LG G G VY T G K A+K K +L+ ++K + +E I+++LDH
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFM---SEAVIMKNLDH 84
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
P + L E + + ++ME P G+L +R + Y ++ A+ YL
Sbjct: 85 PHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLE 142
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ V+RD+ N+LV + L DF LS
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLS 172
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATL 500
++++PE I +A D W F + ++E+L FGK PF EN+ +
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 236
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 14/186 (7%)
Query: 216 RLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFL 275
+L+KKLG G G V++ + A+K + ++ + L E ++++L H L
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNS-TKVAVKTLKPGTMSVQAFL----EEANLMKTLQHDKL 69
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDL-HTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
LY ++ ++ EF G L L+ + GK + + F A++ + Y+
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYIERK 128
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPAC 394
++RDL+ NVLV E ++DF L+ V++ + + K P+ P
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLA-------RVIEDNEYTAREGAKFPIKWTAPEA 181
Query: 395 IEPSCI 400
I C
Sbjct: 182 INFGCF 187
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
++ APE I + W+FGI LYE++ +GK P+ G N A + + + Q R P
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTN-ADVMSALSQGYRMP 230
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 532 PQNR 535
P+ R
Sbjct: 256 PEER 259
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 71
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 72 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 532 PQNR 535
P+ R
Sbjct: 253 PEER 256
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 532 PQNR 535
P+ R
Sbjct: 422 PEER 425
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
K +G G G V+ ++L + KV+ + R E +I++ + HP + L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR--------ELQIMRIVKHPNVVDL 97
Query: 279 YTHFET--DK----FSCLVMEFCPGGDLHTLRQRQPGKY-FSEQAVKFYVAEVLLALEYL 331
F + DK F LV+E+ P R K +K Y+ ++L +L Y+
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 332 HMLGIVYRDLKPENVLVR-EDGHIMLSDF 359
H +GI +RD+KP+N+L+ G + L DF
Sbjct: 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDF 186
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 32/149 (21%)
Query: 448 SMSFVGTHEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNV 503
++S + + Y APE+I G + + +D W+ G + EL+ G+ F G + + V
Sbjct: 198 NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKV 257
Query: 504 VGQPLR--------------FPESPVVSFS----------ARDLIKGLLVKEPQNRLACR 539
+G P R FP+ FS A DLI LL P RL
Sbjct: 258 LGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT-- 315
Query: 540 RGATEIKQHPFFQGVNWALIRCASPPEIP 568
A E HPFF + R + E+P
Sbjct: 316 --AIEALCHPFFDELRTGEARMPNGRELP 342
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 11 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 65
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 125 NYVHRDLRAANILVGENLVCKVADFGLA 152
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ K+
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 246
Query: 532 PQNR 535
P+ R
Sbjct: 247 PEER 250
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 187 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGNMSPEAFLQEAQ----VMKKLRHEK 241
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 242 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDL 361
V+RDL+ N+LV E+ ++DF L
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFGL 327
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ K+
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 422
Query: 532 PQNR 535
P+ R
Sbjct: 423 PEER 426
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMK----------VMDKASLEKRKKLLRAQTEREILQ 268
K+LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 11 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 61
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
LD+P++ + E + + LVME G L+ + Q ++ ++ + V +V + +
Sbjct: 62 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGM 118
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
+YL V+RDL NVL+ + +SDF LS K+ T K PV
Sbjct: 119 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT-----HGKWPVK 173
Query: 389 CVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEM-GNQVSPLPE 438
P CI + + S + F + QKP M G++V+ + E
Sbjct: 174 WYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 222
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF---KGSENRATL 500
++ APE I S D W+FG+ ++E +G+ P+ KGSE A L
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 221
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 532 PQNR 535
P+ R
Sbjct: 256 PEER 259
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 21/181 (11%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F + LG G G V + Y+A+K + + + EK +L +E +L SL+H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTIL---SEVXLLASLNHQY 63
Query: 275 LPTLYTHF-----------ETDKFSCLVM--EFCPGGDLHTLRQRQPGKYFSEQAVKFYV 321
+ Y + K S L + E+C L+ L + ++ + +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF- 122
Query: 322 AEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEP 381
++L AL Y+H GI++R+LKP N+ + E ++ + DF L+ S ++K L+S+
Sbjct: 123 RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK---LDSQN 179
Query: 382 L 382
L
Sbjct: 180 L 180
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFK-GSENRATLYNVVGQP 507
S +GT Y+A E++ G GH +D ++ GI +E ++ PF G E L +
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVS 245
Query: 508 LRFP 511
+ FP
Sbjct: 246 IEFP 249
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 9 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 63
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 64 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 123 NYVHRDLRAANILVGENLVCKVADFGLA 150
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ K+
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 244
Query: 532 PQNR 535
P+ R
Sbjct: 245 PEER 248
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMK----------VMDKASLEKRKKLLRAQTEREILQ 268
K+LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 17 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 67
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
LD+P++ + E + + LVME G L+ + Q ++ ++ + V +V + +
Sbjct: 68 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGM 124
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
+YL V+RDL NVL+ + +SDF LS K+ T K PV
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT-----HGKWPVK 179
Query: 389 CVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEM-GNQVSPLPE 438
P CI + + S + F + QKP M G++V+ + E
Sbjct: 180 WYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF---KGSENRATL 500
++ APE I S D W+FG+ ++E +G+ P+ KGSE A L
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 227
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMK----------VMDKASLEKRKKLLRAQTEREILQ 268
K+LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 17 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 67
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
LD+P++ + E + + LVME G L+ + Q ++ ++ + V +V + +
Sbjct: 68 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGM 124
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
+YL V+RDL NVL+ + +SDF LS K+ T K PV
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQT-----HGKWPVK 179
Query: 389 CVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEM-GNQVSPLPE 438
P CI + + S + F + QKP M G++V+ + E
Sbjct: 180 WYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF---KGSENRATL 500
++ APE I S D W+FG+ ++E +G+ P+ KGSE A L
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 227
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 71
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 72 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 532 PQNR 535
P+ R
Sbjct: 253 PEER 256
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--ILQSLDH 272
F + +LG G+ G V+ + A K++ LE K +R Q RE +L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEI-KPAIRNQIIRELQVLHECNS 63
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL- 331
P++ Y F +D + ME GG L + ++ EQ + V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
I++RD+KP N+LV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF----KGSENRAT 499
++ + SFVGT Y++PE ++G + D W+ G+ L E+ G+ P ++R
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPP 215
Query: 500 L-------YNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNR 535
+ Y V P + P S V S +D + L+K P R
Sbjct: 216 MAIFELLDYIVNEPPPKLP-SGVFSLEFQDFVNKCLIKNPAER 257
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 244 KVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVME-FCPGGDLHT 302
KV++ +E KL + E IL ++H + + FE F LVME G DL
Sbjct: 61 KVLEDCWIED-PKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFA 119
Query: 303 LRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
R P E + +++ A+ YL + I++RD+K EN+++ ED I L DF
Sbjct: 120 FIDRHP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 450 SFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+F GT EY APE++ G + G ++ W+ G+ LY L+F + PF E T+ + P
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF--CELEETVEAAIHPPY 245
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATE 544
+VS L+ GLL P+ R + T+
Sbjct: 246 ------LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMK----------VMDKASLEKRKKLLRAQTEREILQ 268
K+LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 33 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 83
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
LD+P++ + E + + LVME G L+ + Q ++ ++ + V +V + +
Sbjct: 84 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGM 140
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
+YL V+RDL NVL+ + +SDF LS K+ T K PV
Sbjct: 141 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT-----HGKWPVK 195
Query: 389 CVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEM-GNQVSPLPE 438
P CI + + S + F + QKP M G++V+ + E
Sbjct: 196 WYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF---KGSENRATL 500
++ APE I S D W+FG+ ++E +G+ P+ KGSE A L
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 243
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMK----------VMDKASLEKRKKLLRAQTEREILQ 268
K+LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 33 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 83
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
LD+P++ + E + + LVME G L+ + Q ++ ++ + V +V + +
Sbjct: 84 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGM 140
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
+YL V+RDL NVL+ + +SDF LS K+ T K PV
Sbjct: 141 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT-----HGKWPVK 195
Query: 389 CVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEM-GNQVSPLPE 438
P CI + + S + F + QKP M G++V+ + E
Sbjct: 196 WYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF---KGSENRATL 500
++ APE I S D W+FG+ ++E +G+ P+ KGSE A L
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 243
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 217 LLKKLGCGDIGSVYLSELT---GTKCYFAMKVMDK-ASLEKRKKLLRAQTEREILQSLDH 272
L + LG G G VY T G K A+K K +L+ ++K + +E I+++LDH
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFM---SEAVIMKNLDH 72
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
P + L E + + ++ME P G+L +R + Y ++ A+ YL
Sbjct: 73 PHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLE 130
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ V+RD+ N+LV + L DF LS
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLS 160
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATL 500
++++PE I +A D W F + ++E+L FGK PF EN+ +
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 224
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMK----------VMDKASLEKRKKLLRAQTEREILQ 268
K+LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 23 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 73
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
LD+P++ + E + + LVME G L+ + Q ++ ++ + V +V + +
Sbjct: 74 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGM 130
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
+YL V+RDL NVL+ + +SDF LS K+ T K PV
Sbjct: 131 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT-----HGKWPVK 185
Query: 389 CVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEM-GNQVSPLPE 438
P CI + + S + F + QKP M G++V+ + E
Sbjct: 186 WYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF---KGSENRATL 500
++ APE I S D W+FG+ ++E +G+ P+ KGSE A L
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 233
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
++++G G G V+L K A+K + + ++ + + E E++ L HP L
Sbjct: 11 FVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSHPKLV 65
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY CLV EF G L + Q G + +E + + +V + YL +
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEASV 124
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV E+ I +SDF ++
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMT 150
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESP 514
++ +PE+ + S D W+FG+ ++E+ GK P++ N + + + R +
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPR 227
Query: 515 VVSFSARDLIKGLLVKEPQNRLACRR 540
+ S ++ + P++R A R
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAFSR 253
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
L+Y+H I++RDLKP N+ V ED + + DF L
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGL 171
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ S L L + T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 30/231 (12%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMK----------VMDKASLEKRKKLLRAQTEREILQ 268
K+LG G+ G+V K Y+ MK + ++A+ K L A E ++Q
Sbjct: 13 KELGSGNFGTV-------KKGYYQMKKVVKTVAVKILKNEANDPALKDELLA--EANVMQ 63
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
LD+P++ + E + + LVME G L+ + Q ++ ++ + V +V + +
Sbjct: 64 QLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGM 120
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVY 388
+YL V+RDL NVL+ + +SDF LS K+ T K PV
Sbjct: 121 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT-----HGKWPVK 175
Query: 389 CVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEM-GNQVSPLPE 438
P CI + + S + F + QKP M G++V+ + E
Sbjct: 176 WYAPECI--NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF---KGSENRATL 500
++ APE I S D W+FG+ ++E +G+ P+ KGSE A L
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 223
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D LRQ ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLRQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+ DG + VG +++G G G+VY + G A+K+++ + ++L + E
Sbjct: 21 IPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEV 71
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+L+ H + L+ + T +V ++C G L+ K+ ++ + +
Sbjct: 72 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQT 129
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 217 LLKKLGCGDIGSVYLSELT---GTKCYFAMKVMDK-ASLEKRKKLLRAQTEREILQSLDH 272
L + LG G G VY T G K A+K K +L+ ++K + +E I+++LDH
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFM---SEAVIMKNLDH 68
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
P + L E + + ++ME P G+L +R + Y ++ A+ YL
Sbjct: 69 PHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLE 126
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ V+RD+ N+LV + L DF LS
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLS 156
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATL 500
++++PE I +A D W F + ++E+L FGK PF EN+ +
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 220
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+ DG + VG +++G G G+VY + G A+K+++ + ++L + E
Sbjct: 9 IPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEV 59
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+L+ H + L+ + T +V ++C G L+ K+ ++ + +
Sbjct: 60 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQT 117
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 118 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 228
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 172
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRK 255
+ EA + K G L F + +LG G+ G V+ + A K++ LE K
Sbjct: 8 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEI-K 63
Query: 256 KLLRAQTERE--ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
+R Q RE +L + P++ Y F +D + ME GG L + ++ G+
Sbjct: 64 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGR-IP 121
Query: 314 EQAVKFYVAEVLLALEYLH-MLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
EQ + V+ L YL I++RD+KP N+LV G I L DF +S
Sbjct: 122 EQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 441 AEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
+ ++ + SFVGT Y++PE ++G + D W+ G+ L E+ G+ P +
Sbjct: 172 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAI 231
Query: 501 YNVVGQPLRFP----ESPVVSFSARDLIKGLLVKEPQNR 535
+ ++ + P S V S +D + L+K P R
Sbjct: 232 FELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER 270
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
++++G G G V+L K A+K + + S+ + + E E++ L HP L
Sbjct: 31 FVQEIGSGQFGLVHLGYWL-NKDKVAIKTIKEGSMSEDDFI----EEAEVMMKLSHPKLV 85
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY CLV EF G L + Q G + +E + + +V + YL +
Sbjct: 86 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 144
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV E+ I +SDF ++
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMT 170
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESP 514
++ +PE+ + S D W+FG+ ++E+ GK P++ N + + + R +
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPR 247
Query: 515 VVSFSARDLIKGLLVKEPQNRLACRR 540
+ S ++ + P++R A R
Sbjct: 248 LASTHVYQIMNHCWKERPEDRPAFSR 273
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 198 EAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL 257
+A + DG + VG +++G G G+VY + G A+K+++ + ++L
Sbjct: 14 DAADDWEIPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQL 64
Query: 258 LRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAV 317
+ E +L+ H + L+ + T +V ++C G L+ K+ ++ +
Sbjct: 65 QAFKNEVGVLRKTRHVNI-LLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLI 123
Query: 318 KFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ ++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 124 DI-ARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ + H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKIRHEK 74
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 532 PQNR 535
P+ R
Sbjct: 256 PEER 259
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--ILQSLDH 272
F + +LG G+ G V+ + A K++ LE K +R Q RE +L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEI-KPAIRNQIIRELQVLHECNS 63
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL- 331
P++ Y F +D + ME GG L + ++ EQ + V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
I++RD+KP N+LV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
++ + SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 429 MGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 477
+ NQ+ P + T+ S VGT Y+ PE IK D W+
Sbjct: 200 IANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 478 GIFLYELLFGKTPFKGSENRATLYNVVGQP---LRFPESPVVSFSARDLIKGLLVKEPQN 534
G LY + +GKTPF+ N+ + + + P + FP+ P +D++K L ++P+
Sbjct: 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQ 311
Query: 535 RLACRRGATEIKQHPFFQ 552
R++ E+ HP+ Q
Sbjct: 312 RISI----PELLAHPYVQ 325
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDH-- 272
+ +LK++G G V+ L K +A+K ++ + + L + E L L
Sbjct: 58 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHS 115
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ LY + TD++ +VME C DL++ +++ K K Y +L A+ +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTL 377
GIV+ DLKP N L+ DG + L DF ++ + T VVK S +
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV 217
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--ILQSLDH 272
F + +LG G+ G V+ + A K++ LE K +R Q RE +L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEI-KPAIRNQIIRELQVLHECNS 63
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL- 331
P++ Y F +D + ME GG L + ++ EQ + V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
I++RD+KP N+LV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
++ + SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 74
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 75 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 129
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 130 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 98
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 99 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 153
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 154 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL+ N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 532 PQNR 535
P+ R
Sbjct: 256 PEER 259
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 70
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 71 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 125
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 72
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 73 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 127
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 128 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 67
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 68 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 122
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--ILQSLDH 272
F + +LG G+ G V+ + A K++ LE K +R Q RE +L +
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEI-KPAIRNQIIRELQVLHECNS 66
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL- 331
P++ Y F +D + ME GG L + ++ EQ + V+ L YL
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLR 124
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
I++RD+KP N+LV G I L DF +S
Sbjct: 125 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 438 ELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENR 497
+LI E N FVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 157 QLIDEMAN----EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIF 212
Query: 498 ATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKEPQNR 535
L +V +P S V S +D + L+K P R
Sbjct: 213 ELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAER 250
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
++++G G G V+L K A+K + + ++ + + E E++ L HP L
Sbjct: 14 FVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSHPKLV 68
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY CLV EF G L + Q G + +E + + +V + YL +
Sbjct: 69 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 127
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV E+ I +SDF ++
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMT 153
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESP 514
++ +PE+ + S D W+FG+ ++E+ GK P++ N + + + R +
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPR 230
Query: 515 VVSFSARDLIKGLLVKEPQNRLACRR 540
+ S ++ + P++R A R
Sbjct: 231 LASTHVYQIMNHCWRERPEDRPAFSR 256
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 87
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTLESEPLRKNP 386
L+Y+H I++RDLKP N+ V ED + + DF L+ A T V + + + N
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNW 204
Query: 387 VYCVQPACI-EPSCIQPSCIAPTTCF 411
++ Q I CI + T F
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLF 230
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T +V T Y APEI+ H VD W+ G
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 219 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + K S+ K+ R E +L+ + H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR---ELRLLKHMKH 92
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 149
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 164 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 224 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
RL KLG G G V++ GT A+K + ++ L AQ +++ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + + GKY + A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+RDL N+LV E+ ++DF L+
Sbjct: 134 NYVHRDLAAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL G+ P+ G NR L + V + R P P S DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 532 PQNR 535
P+ R
Sbjct: 256 PEER 259
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 429 MGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 477
+ NQ+ P + T+ S VGT Y+ PE IK D W+
Sbjct: 200 IANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 478 GIFLYELLFGKTPFKGSENRATLYNVVGQP---LRFPESPVVSFSARDLIKGLLVKEPQN 534
G LY + +GKTPF+ N+ + + + P + FP+ P +D++K L ++P+
Sbjct: 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQ 311
Query: 535 RLACRRGATEIKQHPFFQ 552
R++ E+ HP+ Q
Sbjct: 312 RISI----PELLAHPYVQ 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDH-- 272
+ +LK++G G V+ L K +A+K ++ + + L + E L L
Sbjct: 58 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHS 115
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ LY + TD++ +VME C DL++ +++ K K Y +L A+ +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTL 377
GIV+ DLKP N L+ DG + L DF ++ + T VVK S +
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 85
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 86 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 140
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 82
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 174
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ S L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 154 KPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 214 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 73
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 74 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 128
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 129 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 87
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTLESEPLRKNP 386
L+Y+H I++RDLKP N+ V ED + + DF L+ A T V + + + N
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNW 204
Query: 387 VYCVQPACI-EPSCIQPSCIAPTTCF 411
++ Q I CI + T F
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLF 230
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T +V T Y APEI+ H VD W+ G
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 219 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
++++G G G V+L K A+K + + ++ + + E E++ L HP L
Sbjct: 11 FVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSHPKLV 65
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY CLV EF G L + Q G + +E + + +V + YL +
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 124
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV E+ I +SDF ++
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMT 150
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPV 515
+ +PE+ + S D W+FG+ ++E+ GK P++ N + + + R + +
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPRL 228
Query: 516 VSFSARDLIKGLLVKEPQNRLACRR 540
S ++ + P++R A R
Sbjct: 229 ASTHVYQIMNHCWKERPEDRPAFSR 253
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 27/162 (16%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKV------MDKASLEKRKKLLRAQTEREIL 267
+FR+ KK+GCG+ G + L + T Y A+K+ + LE R + TE
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATEG--- 61
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGG--DLHTLRQRQPGKYFSEQAVKFYVAEVL 325
+P +Y K++ +V+E DL L R F+ + V +++
Sbjct: 62 -------VPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLI 110
Query: 326 LALEYLHMLGIVYRDLKPENVLVREDG-----HIMLSDFDLS 362
+EY+H ++YRD+KPEN LV G I + DF L+
Sbjct: 111 TRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 67
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 68 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 122
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 429 MGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 477
+ NQ+ P + T+ S VGT Y+ PE IK D W+
Sbjct: 156 IANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 209
Query: 478 GIFLYELLFGKTPFKGSENRATLYNVVGQP---LRFPESPVVSFSARDLIKGLLVKEPQN 534
G LY + +GKTPF+ N+ + + + P + FP+ P +D++K L ++P+
Sbjct: 210 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQ 267
Query: 535 RLACRRGATEIKQHPFFQ 552
R++ E+ HP+ Q
Sbjct: 268 RISI----PELLAHPYVQ 281
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDH-- 272
+ +LK++G G V+ L K +A+K ++ + + L + E L L
Sbjct: 14 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHS 71
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ LY + TD++ +VME C DL++ +++ K K Y +L A+ +H
Sbjct: 72 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 128
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTL 377
GIV+ DLKP N L+ DG + L DF ++ + T VVK S +
Sbjct: 129 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV 173
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 87
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTLESEPLRKNP 386
L+Y+H I++RDLKP N+ V ED + + DF L+ A T V + + + N
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNW 204
Query: 387 VYCVQPACI-EPSCIQPSCIAPTTCF 411
++ Q I CI + T F
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLF 230
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T +V T Y APEI+ H VD W+ G
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 219 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 86
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 178
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ S L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 158 KPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 218 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 67
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 68 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 122
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 85
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 86 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 140
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 141 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 66
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 67 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 121
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 122 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 65
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 66 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 120
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 121 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 71
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 72 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 126
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 127 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 85
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 157 KPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 217 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 214 HFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
H+ ++KLG G V L E ++A+K + + R++ AQ E ++ + +HP
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREE---AQREADMHRLFNHP 86
Query: 274 FLPTLYTHFETDKFS----CLVMEFCPGGDL--HTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L + ++ + L++ F G L R + G + +E + + + +
Sbjct: 87 NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
LE +H G +RDLKP N+L+ ++G +L D
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL 178
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 454 THEYLAPEIIKGEGH---GSAVDWWTFGIFLYELLFGKTPFKGSENRA-TLYNVVGQPLR 509
T Y APE+ + H D W+ G LY ++FG+ P+ + ++ V L
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265
Query: 510 FPESPVVSFSARDLIKGLLVKEPQNR 535
P+SP S + L+ ++ +P R
Sbjct: 266 IPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 78/196 (39%), Gaps = 51/196 (26%)
Query: 312 FSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV-REDGHIMLSDFDLSLRCAVSPT 370
S Q V+ Y+ + AL+ +H GIV+RD+KP N L R L DF L+
Sbjct: 114 LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA-------- 165
Query: 371 VVKSSTLESEPLRKNPVYCVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKKAQKPKNEMG 430
+ + E L+ VQ + C Q C + C S R
Sbjct: 166 -QGTHDTKIELLK-----FVQSEAQQERCSQNKC---SICLSRR---------------- 200
Query: 431 NQVSPLPELIAEPTNARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKT 489
QV+P GT + APE++ K +A+D W+ G+ LL G+
Sbjct: 201 QQVAPR---------------AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245
Query: 490 PF-KGSENRATLYNVV 504
PF K S++ L ++
Sbjct: 246 PFYKASDDLTALAQIM 261
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 255 KKLLRAQTEREILQSLDHPF---LPTLYTHFETDKFS--CLVMEFCPGGDLHTLRQRQPG 309
K++LR E +L HP L ++ HFE LV E + ++
Sbjct: 74 KRVLR---EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRI- 129
Query: 310 KYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
S Q +++++ +LL L LH G+V+RDL P N+L+ ++ I + DF+L+
Sbjct: 130 -VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 442 EPTNARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
+ +A +V Y APE++ + +G VD W+ G + E+ K F+GS T
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS----TF 239
Query: 501 YNVVGQPLRFPESP----VVSF---SARDLIKGLLVKEP 532
YN + + + +P VV F SARD ++ L P
Sbjct: 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP 278
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
++++G G G V+L K A+K + + ++ + + E E++ L HP L
Sbjct: 9 FVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSHPKLV 63
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY CLV EF G L + Q G + +E + + +V + YL +
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 122
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV E+ I +SDF ++
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMT 148
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNV 503
+ +PE+ + S D W+FG+ ++E+ GK P++ N + ++
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--ILQSLDH 272
F + +LG G+ G V+ + A K++ LE K +R Q RE +L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEI-KPAIRNQIIRELQVLHECNS 63
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL- 331
P++ Y F +D + ME GG L + ++ EQ + V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
I++RD+KP N+LV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
++ + SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTERE--ILQSLDH 272
F + +LG G+ G V+ + A K++ LE K +R Q RE +L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLI---HLEI-KPAIRNQIIRELQVLHECNS 63
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL- 331
P++ Y F +D + ME GG L + ++ EQ + V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLR 121
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
I++RD+KP N+LV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
++ + SFVGT Y++PE ++G + D W+ G+ L E+ G+ P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 429 MGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 477
+ NQ+ P + T+ S VGT Y+ PE IK D W+
Sbjct: 152 IANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 205
Query: 478 GIFLYELLFGKTPFKGSENRATLYNVVGQP---LRFPESPVVSFSARDLIKGLLVKEPQN 534
G LY + +GKTPF+ N+ + + + P + FP+ P +D++K L ++P+
Sbjct: 206 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQ 263
Query: 535 RLACRRGATEIKQHPFFQ 552
R++ E+ HP+ Q
Sbjct: 264 RISI----PELLAHPYVQ 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDH-- 272
+ +LK++G G V+ L K +A+K ++ + + L + E L L
Sbjct: 10 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHS 67
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ LY + TD++ +VME C DL++ +++ K K Y +L A+ +H
Sbjct: 68 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 124
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTL 377
GIV+ DLKP N L+ DG + L DF ++ + T VVK S +
Sbjct: 125 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV 169
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 91
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 148
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 183
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 163 KPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 222
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 223 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 273
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
++++G G G V+L K A+K + + ++ + + E E++ L HP L
Sbjct: 12 FVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFI----EEAEVMMKLSHPKLV 66
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY CLV EF G L + Q G + +E + + +V + YL +
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 125
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV E+ I +SDF ++
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMT 151
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPV 515
+ +PE+ + S D W+FG+ ++E+ GK P++ N + + + R + +
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPRL 229
Query: 516 VSFSARDLIKGLLVKEPQNRLACRR 540
S ++ + P++R A R
Sbjct: 230 ASTHVYQIMNHCWRERPEDRPAFSR 254
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 255 KKLLRAQTEREILQSLDHPF---LPTLYTHFETDKFS--CLVMEFCPGGDLHTLRQRQPG 309
K++LR E +L HP L ++ HFE LV E + ++
Sbjct: 74 KRVLR---EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRI- 129
Query: 310 KYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
S Q +++++ +LL L LH G+V+RDL P N+L+ ++ I + DF+L+
Sbjct: 130 -VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 442 EPTNARSMSFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
+ +A +V Y APE++ + +G VD W+ G + E+ K F+GS T
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS----TF 239
Query: 501 YNVVGQPLRFPESP----VVSF---SARDLIKGLLVKEP 532
YN + + + +P VV F SARD ++ L P
Sbjct: 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP 278
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 429 MGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 477
+ NQ+ P + T+ S VGT Y+ PE IK D W+
Sbjct: 153 IANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206
Query: 478 GIFLYELLFGKTPFKGSENRATLYNVVGQP---LRFPESPVVSFSARDLIKGLLVKEPQN 534
G LY + +GKTPF+ N+ + + + P + FP+ P +D++K L ++P+
Sbjct: 207 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQ 264
Query: 535 RLACRRGATEIKQHPFFQ 552
R++ E+ HP+ Q
Sbjct: 265 RISI----PELLAHPYVQ 278
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+ +LK++G G V+ L K +A+K ++ + + L + E L L
Sbjct: 11 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHS 68
Query: 275 --LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ LY + TD++ +VME C DL++ +++ K K Y +L A+ +H
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 125
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTL 377
GIV+ DLKP N L+ DG + L DF ++ + T VVK S +
Sbjct: 126 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV 170
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 429 MGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 477
+ NQ+ P + T+ S VGT Y+ PE IK D W+
Sbjct: 172 IANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 478 GIFLYELLFGKTPFKGSENRATLYNVVGQP---LRFPESPVVSFSARDLIKGLLVKEPQN 534
G LY + +GKTPF+ N+ + + + P + FP+ P +D++K L ++P+
Sbjct: 226 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQ 283
Query: 535 RLACRRGATEIKQHPFFQ 552
R++ E+ HP+ Q
Sbjct: 284 RISI----PELLAHPYVQ 297
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDH-- 272
+ +LK++G G V+ L K +A+K ++ + + L + E L L
Sbjct: 30 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHS 87
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ LY + TD++ +VME C DL++ +++ K K Y +L A+ +H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 144
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTL 377
GIV+ DLKP N L+ DG + L DF ++ + T VVK S +
Sbjct: 145 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV 189
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 85
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 157 KPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 217 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 99
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 156
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 171 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 230
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 231 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 281
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 100
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 157
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 172 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 232 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 82
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 154 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 214 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 103
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 160
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 175 KPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 234
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 235 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 285
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 78
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 135
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 170
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 150 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 209
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 210 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 260
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 92
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 149
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 164 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 224 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 92
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 149
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 164 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 224 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 82
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 154 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 214 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 82
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 154 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 214 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 91
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 148
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 183
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 163 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 222
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 223 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 273
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 77
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 134
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 149 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 208
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 209 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 259
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 87
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 219 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMK--------VMDKASLEKRKKLLRAQTEREI 266
++ L +G G GSV S + A+K ++ + +LL+ +
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ LD F P T E LV G DL+ + + Q ++ V+F + ++L
Sbjct: 113 IGLLD-VFTPA--TSLEEFNDVYLVTHLM-GADLNNIVKCQK---LTDDHVQFLIYQILR 165
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 166 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 201
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 37/161 (22%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 181 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGC 240
Query: 480 FLYELLFGKTPFKGSENRATLYNVV---GQP-----------------LRFPESPVVSFS 519
+ ELL G+T F G+++ L ++ G P P+ P +F+
Sbjct: 241 IMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFA 300
Query: 520 ---------ARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
A DL++ +LV + R+ A+E HP+F
Sbjct: 301 DVFIGANPLAVDLLEKMLVLDTDKRIT----ASEALAHPYF 337
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 85
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 157 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 217 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 79
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 136
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 171
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 151 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 210
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 211 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 261
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 76
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 133
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 208 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 103
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 160
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 175 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 234
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 235 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 285
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 14/187 (7%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+L+K+LG G G V++ + A+K + ++ + L E ++++L H
Sbjct: 15 IKLVKRLGAGQFGEVWMGYYNNS-TKVAVKTLKPGTMSVQAFL----EEANLMKTLQHDK 69
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDL-HTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY ++ ++ E+ G L L+ + GK + + F A++ + Y+
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYIER 128
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPA 393
++RDL+ NVLV E ++DF L+ V++ + + K P+ P
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGLA-------RVIEDNEYTAREGAKFPIKWTAPE 181
Query: 394 CIEPSCI 400
I C
Sbjct: 182 AINFGCF 188
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
++ APE I D W+FGI LYE++ +GK P+ G N A + + Q R P
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTN-ADVMTALSQGYRMP 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 77
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 134
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 149 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 208
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 209 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 259
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 86
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 158 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 218 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 216 RLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFL 275
R+ KK+GCG+ G + L + T Y A+K+ ++ R L + L
Sbjct: 3 RVGKKIGCGNFGELRLGKNLYTNEYVAIKL---EPIKSRAPQLHLEYRFYKQLGSAGEGL 59
Query: 276 PTLYTHFETDKFSCLVMEFCPGG--DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
P +Y K++ +V+E DL L R F+ + V ++L +EY+H
Sbjct: 60 PQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLLSRMEYVHS 115
Query: 334 LGIVYRDLKPENVLVREDGH-----IMLSDFDLS 362
++YRD+KPEN L+ G+ I + DF L+
Sbjct: 116 KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 86
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 158 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 218 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NVL+
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 100
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 157
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ V T Y APEI+ H VD W+ G
Sbjct: 172 KPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 232 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
L ++G G G+VY + G +KV+D ++ + E +L+ H +
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTP----EQFQAFRNEVAVLRKTRHVNI- 94
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
L+ + T +V ++C G L+ Q K+ Q + + ++YLH I
Sbjct: 95 LLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDI-ARQTAQGMDYLHAKNI 153
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RD+K N+ + E + + DF L+
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLA 179
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 453 GTHEYLAPEIIKGEGHG---SAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
G+ ++APE+I+ + + D +++GI LYEL+ G+ P+ NR + +VG+
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA 255
Query: 510 FPE 512
P+
Sbjct: 256 SPD 258
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 70
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q + + ++ Y ++
Sbjct: 71 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ-YTSQ 125
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++RDL N+LV + + + DF L+
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+L LG G G V + T A+K ++ +K LR E +IL+ H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFKHEN 70
Query: 275 LPTLYTHFETDKFS----CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
+ T++ D F +++ DLH + Q S+ +++++ + L A++
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKV 127
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
LH +++RDLKP N+L+ + + + DF L+
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 37/145 (25%)
Query: 441 AEPTNARS--MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENR 497
+EPT +S V T Y APE+ + + A+D W+ G L EL + F G + R
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 498 ATL---YNVVGQP-----LR----------------FPESPVVSFSAR------DLIKGL 527
L + ++G P LR +P +P+ R DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 528 LVKEPQNRLACRRGATEIKQHPFFQ 552
LV +P R+ A E +HP+ Q
Sbjct: 290 LVFDPAKRIT----AKEALEHPYLQ 310
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 99
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 156
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 171 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 230
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 231 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 281
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 85
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 157 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 217 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 100
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 157
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 172 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 232 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDH-- 272
+ +LK++G G V+ L K +A+K ++ + + L + E L L
Sbjct: 58 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHS 115
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ LY + TD++ +VME C DL++ +++ K K Y +L A+ +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPT-VVKSSTL 377
GIV+ DLKP N L+ DG + L DF ++ + T VVK S +
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 26/138 (18%)
Query: 429 MGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHG-----------SAVDWWTF 477
+ NQ+ P + T+ S VG Y+ PE IK D W+
Sbjct: 200 IANQMQP------DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 478 GIFLYELLFGKTPFKGSENRATLYNVVGQP---LRFPESPVVSFSARDLIKGLLVKEPQN 534
G LY + +GKTPF+ N+ + + + P + FP+ P +D++K L ++P+
Sbjct: 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQ 311
Query: 535 RLACRRGATEIKQHPFFQ 552
R++ E+ HP+ Q
Sbjct: 312 RISI----PELLAHPYVQ 325
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD-HP 273
+ L+KKLG G G V+ S T A+K + A + R E IL L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHE 69
Query: 274 FLPTLYTHF--ETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL 331
+ L + D+ LV ++ DLH + + + +Q V V +++ ++YL
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYV---VYQLIKVIKYL 125
Query: 332 HMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
H G+++RD+KP N+L+ + H+ ++DF LS
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLS 156
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 450 SFVGTHEYLAPEIIKGEG-HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
+V T Y APEI+ G + +D W+ G L E+L GK F GS L ++G +
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG-VI 247
Query: 509 RFPESPVV 516
FP + V
Sbjct: 248 DFPSNEDV 255
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 76
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 133
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ FV T Y APEI+ H VD W+ G
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 208 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+L LG G G V + T A+K ++ +K LR E +IL+ H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFKHEN 70
Query: 275 LPTLYTHFETDKFS----CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
+ T++ D F +++ DLH + Q S+ +++++ + L A++
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKV 127
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
LH +++RDLKP N+L+ + + + DF L+
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 37/145 (25%)
Query: 441 AEPTNARS--MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENR 497
+EPT +S +V T Y APE+ + + A+D W+ G L EL + F G + R
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 498 ATL---YNVVGQP-----LR----------------FPESPVVSFSAR------DLIKGL 527
L + ++G P LR +P +P+ R DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 528 LVKEPQNRLACRRGATEIKQHPFFQ 552
LV +P R+ A E +HP+ Q
Sbjct: 290 LVFDPAKRIT----AKEALEHPYLQ 310
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 76
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 133
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 208 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F+L LG G G V + T A+K ++ +K LR E +IL+ H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFKHEN 70
Query: 275 LPTLYTHFETDKFS----CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
+ T++ D F +++ DLH + Q S+ +++++ + L A++
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKV 127
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
LH +++RDLKP N+L+ + + + DF L+
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 37/145 (25%)
Query: 441 AEPTNARS--MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENR 497
+EPT +S + FV T Y APE+ + + A+D W+ G L EL + F G + R
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 498 ATL---YNVVGQP-----LR----------------FPESPVVSFSAR------DLIKGL 527
L + ++G P LR +P +P+ R DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 528 LVKEPQNRLACRRGATEIKQHPFFQ 552
LV +P R+ A E +HP+ Q
Sbjct: 290 LVFDPAKRIT----AKEALEHPYLQ 310
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRF 510
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 288
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS + LI+ LL EP R+ TE HP+
Sbjct: 289 PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 325
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K++ +R+ L RA I++ +D L
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 127
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVY 338
Y K +VME GG+L + Q + + F+E+ + + A++YLH + I +
Sbjct: 128 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 184
Query: 339 RDLKPENVLV---REDGHIMLSDF 359
RD+KPEN+L R + + L+DF
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDF 208
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 31/235 (13%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K++ +R+ L RA I++ +D L
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 81
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVY 338
Y K +VME GG+L + Q + + F+E+ + + A++YLH + I +
Sbjct: 82 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 339 RDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACI 395
RD+KPEN+L R + + L+DF + ++ +EP P Y V P +
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL-------TEPCY-TPYY-VAPEVL 189
Query: 396 EPSCIQPSC--------IAPTTCFSPRFFSKSKKAQKP----KNEMGNQVSPLPE 438
P SC + C P F+S A P + MG P PE
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 244
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRF 510
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS + LI+ LL EP R+ TE HP+
Sbjct: 243 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 279
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 21/260 (8%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
+K+G G G+V+ +E G+ + + E+ + LR E I++ L HP +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLR---EVAIMKRLRHPNIVLF 99
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLG-- 335
+V E+ G L+ L + + ++ + +A +V + YLH
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 336 IVYRDLKPENVLVREDGHIMLSDFDLSL----------RCAVSPTVVKSSTLESEPLR-K 384
IV+RDLK N+LV + + + DF LS A +P + L EP K
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 385 NPVYCVQPACIEPSCIQPSC--IAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAE 442
+ VY E + +Q + P + F K K+ + P+N + QV+ + E
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF-KCKRLEIPRN-LNPQVAAIIEGCWT 277
Query: 443 PTNARSMSFVGTHEYLAPEI 462
+ SF + L P I
Sbjct: 278 NEPWKRPSFATIMDLLRPLI 297
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVG---QPLR 509
GT E++APE+++ E D ++FG+ L+EL + P+ G+ N A + VG + L
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFKCKRLE 259
Query: 510 FPESPVVSFSARDLIKGLLVKEPQNR 535
P + +A +I+G EP R
Sbjct: 260 IPRNLNPQVAA--IIEGCWTNEPWKR 283
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRF 510
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 294
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS + LI+ LL EP R+ TE HP+
Sbjct: 295 PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K++ +R+ L RA I++ +D L
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 133
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVY 338
Y K +VME GG+L + Q + + F+E+ + + A++YLH + I +
Sbjct: 134 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 190
Query: 339 RDLKPENVLV---REDGHIMLSDF 359
RD+KPEN+L R + + L+DF
Sbjct: 191 RDVKPENLLYTSKRPNAILKLTDF 214
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 90
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 147
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 148 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 182
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 162 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 221
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 222 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 272
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRF 510
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS + LI+ LL EP R+ TE HP+
Sbjct: 245 PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 281
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K++ +R+ L RA I++ +D L
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 83
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVY 338
Y K +VME GG+L + Q + + F+E+ + + A++YLH + I +
Sbjct: 84 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 339 RDLKPENVLV---REDGHIMLSDF 359
RD+KPEN+L R + + L+DF
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDF 164
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 18/159 (11%)
Query: 214 HFRLLKKLGCGDIGSVYLSELT----GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
H + L++LG G+ GSV + T A+K + ++ E + R E EIL+S
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER---EIEILKS 68
Query: 270 LDHPFLPTLYTHFETDKFSC------LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
L H + ++ +S L+ME+ P G L Q+ + + ++ Y ++
Sbjct: 69 LQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQ 123
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EYL ++R+L N+LV + + + DF L+
Sbjct: 124 ICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ FV T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ FV T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRF 510
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS + LI+ LL EP R+ TE HP+
Sbjct: 243 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K++ +R+ L RA I++ +D L
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 81
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVY 338
Y K +VME GG+L + Q + + F+E+ + + A++YLH + I +
Sbjct: 82 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 339 RDLKPENVLV---REDGHIMLSDFDLS 362
RD+KPEN+L R + + L+DF +
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 213 GHFRLLKKLGCG--DIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSL 270
G + LL +G G D+ +V L+ T Y ++ ++ + + + Q E + +
Sbjct: 9 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN-EMVTFLQGELHVSKLF 67
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
+HP + F D +V F G L +E A+ + + VL AL+Y
Sbjct: 68 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 127
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLS 357
+H +G V+R +K ++L+ DG + LS
Sbjct: 128 IHHMGYVHRSVKASHILISVDGKVYLS 154
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVR 349
L+MEF P G L + K +Q +K Y ++ ++YL V+RDL NVLV
Sbjct: 102 LIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDYLGSRQYVHRDLAARNVLVE 160
Query: 350 EDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEPS 398
+ + + DF L+ T + T++ + R +PV+ P C+ S
Sbjct: 161 SEHQVKIGDFGLT---KAIETDKEXXTVKDD--RDSPVFWYAPECLMQS 204
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 115 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 170 DHEHRKLRLIDWGLA 184
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 86
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 158 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 218 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 164 DHEHRKLRLIDWGLA 178
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRF 510
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 249
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS + LI+ LL EP R+ TE HP+
Sbjct: 250 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 286
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K++ +R+ L RA I++ +D L
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 88
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVY 338
Y K +VME GG+L + Q + + F+E+ + + A++YLH + I +
Sbjct: 89 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 145
Query: 339 RDLKPENVLV---REDGHIMLSDFDLS 362
RD+KPEN+L R + + L+DF +
Sbjct: 146 RDVKPENLLYTSKRPNAILKLTDFGFA 172
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRF 510
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 243
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS + LI+ LL EP R+ TE HP+
Sbjct: 244 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 280
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K++ +R+ L RA I++ +D L
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 82
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVY 338
Y K +VME GG+L + Q + + F+E+ + + A++YLH + I +
Sbjct: 83 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 139
Query: 339 RDLKPENVLV---REDGHIMLSDFDLS 362
RD+KPEN+L R + + L+DF +
Sbjct: 140 RDVKPENLLYTSKRPNAILKLTDFGFA 166
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRF 510
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 258
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS + LI+ LL EP R+ TE HP+
Sbjct: 259 PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K++ +R+ L RA I++ +D L
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 97
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVY 338
Y K +VME GG+L + Q + + F+E+ + + A++YLH + I +
Sbjct: 98 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 154
Query: 339 RDLKPENVLV---REDGHIMLSDFDLS 362
RD+KPEN+L R + + L+DF +
Sbjct: 155 RDVKPENLLYTSKRPNAILKLTDFGFA 181
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRF 510
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 248
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS + LI+ LL EP R+ TE HP+
Sbjct: 249 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 285
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K++ +R+ L RA I++ +D L
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 87
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVY 338
Y K +VME GG+L + Q + + F+E+ + + A++YLH + I +
Sbjct: 88 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 144
Query: 339 RDLKPENVLV---REDGHIMLSDFDLS 362
RD+KPEN+L R + + L+DF +
Sbjct: 145 RDVKPENLLYTSKRPNAILKLTDFGFA 171
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRF 510
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 250
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS + LI+ LL EP R+ TE HP+
Sbjct: 251 PEWSEVSEEVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K++ +R+ L RA I++ +D L
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 89
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVY 338
Y K +VME GG+L + Q + + F+E+ + + A++YLH + I +
Sbjct: 90 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 146
Query: 339 RDLKPENVLV---REDGHIMLSDFDLS 362
RD+KPEN+L R + + L+DF +
Sbjct: 147 RDVKPENLLYTSKRPNAILKLTDFGFA 173
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRF 510
Y+APE++ E + + D W+ G+ +Y LL G PF + A T +
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS + LI+ LL EP R+ TE HP+
Sbjct: 245 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 281
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K++ +R+ L RA I++ +D L
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 83
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVY 338
Y K +VME GG+L + Q + + F+E+ + + A++YLH + I +
Sbjct: 84 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 339 RDLKPENVLV---REDGHIMLSDFDLS 362
RD+KPEN+L R + + L+DF +
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSEL--TGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
V + L K+G G G V+ + TG K +M+ EK + A E +ILQ
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQL 73
Query: 270 LDHPFLPTLYTHFETDK---FSC-----LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYV 321
L H + L T C LV +FC DL L K F+ +K +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRVM 131
Query: 322 AEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+L L Y+H I++RD+K NVL+ DG + L+DF L+
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 164 DHEHRKLRLIDWGLA 178
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Query: 213 GHFRLLKKLGCG--DIGSVYLSELTGTKCYFAMKVMDKASLE--KRKKLLRAQTEREILQ 268
G + LL +G G D+ +V L+ T Y ++ + +LE + + Q E + +
Sbjct: 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVR---RINLEACSNEMVTFLQGELHVSK 81
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
+HP + F D +V F G L +E A+ + + VL AL
Sbjct: 82 LFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 141
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLS 357
+Y+H +G V+R +K ++L+ DG + LS
Sbjct: 142 DYIHHMGYVHRSVKASHILISVDGKVYLS 170
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 25/161 (15%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
F++ + G G G+V L + T A+K + + + ++L Q L L HP
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD----LAVLHHPN 80
Query: 275 LPTLYTHFET-------DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQA------VKFYV 321
+ L ++F T D + +VME+ P LH R Y+ Q +K ++
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-LH----RCCRNYYRRQVAPPPILIKVFL 135
Query: 322 AEVLLALEYLHM--LGIVYRDLKPENVLVRE-DGHIMLSDF 359
+++ ++ LH+ + + +RD+KP NVLV E DG + L DF
Sbjct: 136 FQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDF 176
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 448 SMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV 504
+++++ + Y APE+I G H +AVD W+ G E++ G+ F+G + L+ +V
Sbjct: 188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E D L Q ++ ++FY+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 108 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
Query: 349 -REDGHIMLSDFDLS 362
E + L D+ L+
Sbjct: 163 DHEHRKLRLIDWGLA 177
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 260 AQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF 319
A E ++L+ L H L L + K LV EF L L G Q V+
Sbjct: 71 AMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG--LDYQVVQK 128
Query: 320 YVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLES 379
Y+ +++ + + H I++RD+KPEN+LV + G + L DF + R +P V + +
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA-RTLAAPGEVYDDEVAT 187
Query: 380 EPLR 383
R
Sbjct: 188 RWYR 191
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 51/131 (38%), Gaps = 34/131 (25%)
Query: 452 VGTHEYLAPEIIKGE-GHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV------- 503
V T Y APE++ G+ +G AVD W G + E+ G+ F G + LY++
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNL 244
Query: 504 ------------VGQPLRFPE----------SPVVSFSARDLIKGLLVKEPQNRLACRRG 541
V +R PE P +S DL K L +P R C
Sbjct: 245 IPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFC--- 301
Query: 542 ATEIKQHPFFQ 552
E+ H FFQ
Sbjct: 302 -AELLHHDFFQ 311
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVR 349
L+MEF P G L + K +Q +K Y ++ ++YL V+RDL NVLV
Sbjct: 90 LIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDYLGSRQYVHRDLAARNVLVE 148
Query: 350 EDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEPS 398
+ + + DF L+ T + T++ + R +PV+ P C+ S
Sbjct: 149 SEHQVKIGDFGLT---KAIETDKEXXTVKDD--RDSPVFWYAPECLMQS 192
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 196 QWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKA--SLEK 253
Q I+ V+V D + + +G G G VYL+ A+K +++ L
Sbjct: 17 QGAIIKNVKVPDN------YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLID 70
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHF---ETDKFSCL--VMEFCPGGDLHTLRQRQP 308
K++LR T IL L ++ L+ + KF L V+E DL L +
Sbjct: 71 CKRILREIT---ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIA-DSDLKKLFKTPI 126
Query: 309 GKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +EQ VK + +LL +++H GI++RDLKP N L+ +D + + DF L+
Sbjct: 127 --FLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY+ A+K + + ++E + L A +EI HP L L
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 94
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ +V E+ P G+L + + + + + ++ A+EYL ++R
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHR 154
Query: 340 DLKPENVLVREDGHIMLSDFDLS 362
DL N LV E+ + ++DF LS
Sbjct: 155 DLAARNCLVGENHVVKVADFGLS 177
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + D+ L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA 172
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 20/117 (17%)
Query: 450 SFVGTHEYLAPEIIKGEGHG-----------SAVDWWTFGIFLYELLFGKTPFKGSENRA 498
S VGT Y+ PE IK D W+ G LY + +GKTPF+ N+
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 499 TLYNVVGQP---LRFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
+ + + P + FP+ P +D++K L ++P+ R++ E+ HP+ Q
Sbjct: 247 SKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISI----PELLAHPYVQ 297
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDH-- 272
+ +LK++G G V+ L K +A+K ++ + + L + E L L
Sbjct: 30 YSILKQIGSGGSSKVF-QVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHS 87
Query: 273 PFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+ LY + TD++ +VME C DL++ +++ K K Y +L A+ +H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 144
Query: 333 MLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
GIV+ DLKP N L+ DG + L DF ++
Sbjct: 145 QHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA 172
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
LK+LG G G V + G + A+K++ + S+ + + + E +++ +L H L
Sbjct: 28 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 82
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY + ++ E+ G L + ++ ++Q ++ +V A+EYL
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 141
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV + G + +SDF LS
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLS 167
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 460 PEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRF 510
PE++ S D W FG+ ++E+ GK P++ N T + + Q LR
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 240
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 69
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+M+ P G L R+ Q + + ++
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDY-VREHKDNIGSQYLLNWCVQI 127
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 204 RVKDGVLGVGHFRLLKKLGCGDIGSVY---LSELTGTKCYFAMKVM--DKASLEKRKKLL 258
+++D V+ L K LG G+ GSV L + GT A+K M D +S + ++ L
Sbjct: 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL 84
Query: 259 RAQTEREILQSLDHP-FLPTLYTHFETDKFSC----LVMEFCPGGDLHTL----RQRQPG 309
+E ++ HP + L E +++ F GDLHT R
Sbjct: 85 ---SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP 141
Query: 310 KYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
K+ Q + ++ ++ L +EYL ++RDL N ++R+D + ++DF LS
Sbjct: 142 KHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS 194
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATL-YNVVGQPLRFPES 513
+++A E + + S D W FG+ ++E+ G TP+ G +N Y + G L+ PE
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPED 273
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L + +LL+ +G G+ G V L + G K A+K + + + E ++
Sbjct: 9 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQA-----FLAEASVMTQ 61
Query: 270 LDHPFLPTLYTHFETDKFSC-LVMEFCPGGDL-HTLRQRQPGKYFSEQAVKFYVAEVLLA 327
L H L L +K +V E+ G L LR R + +KF + +V A
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCEA 120
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+EYL V+RDL NVLV ED +SDF L+
Sbjct: 121 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF 491
++ APE ++ + D W+FGI L+E+ FG+ P+
Sbjct: 170 KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L + +LL+ +G G+ G V L + G K A+K + + + E ++
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQA-----FLAEASVMTQ 242
Query: 270 LDHPFLPTLYTHFETDKFSC-LVMEFCPGGDL-HTLRQRQPGKYFSEQAVKFYVAEVLLA 327
L H L L +K +V E+ G L LR R + +KF + +V A
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCEA 301
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+EYL V+RDL NVLV ED +SDF L+
Sbjct: 302 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF 491
++ APE ++ + + D W+FGI L+E+ FG+ P+
Sbjct: 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
LK+LG G G V + G + A+K++ + S+ + + + E +++ +L H L
Sbjct: 28 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 82
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY + ++ E+ G L + ++ ++Q ++ +V A+EYL
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 141
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV + G + +SDF LS
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLS 167
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 460 PEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRF 510
PE++ S D W FG+ ++E+ GK P++ N T + + Q LR
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 240
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 6/165 (3%)
Query: 201 QAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELT---GTKCYFAMKVMDKASLEKRKKL 257
+AVR + + ++ + +G G+ G V L + + A+K + EK+++
Sbjct: 21 EAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD 80
Query: 258 LRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAV 317
+E I+ DHP + L ++ EF G L + ++ G++ Q V
Sbjct: 81 FL--SEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 138
Query: 318 KFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + ++YL + V+RDL N+LV + +SDF LS
Sbjct: 139 GM-LRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS 182
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE I+ SA D W++GI ++E++ +G+ P+ N+ + N + Q R P
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI-NAIEQDYRLP 260
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSEL--TGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
V + L K+G G G V+ + TG K +M+ EK + A E +ILQ
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQL 73
Query: 270 LDHPFLPTL----------YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF 319
L H + L Y + + LV +FC DL L K F+ +K
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIY--LVFDFCEH-DLAGLLSNVLVK-FTLSEIKR 129
Query: 320 YVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +L L Y+H I++RD+K NVL+ DG + L+DF L+
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 6/168 (3%)
Query: 219 KKLGCGDIGSVYLSELT---GTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFL 275
+ +G G+ G V L + A+K + EK+++ E I+ DHP +
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLG--EASIMGQFDHPNI 85
Query: 276 PTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLG 335
L K +V E+ G L T ++ G++ Q V + + ++YL +G
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGM-LRGISAGMKYLSDMG 144
Query: 336 IVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLR 383
V+RDL N+L+ + +SDF LS P ++ P+R
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 192
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE I SA D W++GI ++E++ +G+ P+ N+ + V + R P
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI-KAVEEGYRLP 247
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 311 YFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
Y +E +K + +L+ ++Y+H GI++RDLKP N LV +D + + DF L+
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVM----DKASLEKRKKLLRAQTEREILQSLDHPF 274
K++G G G V+ L K A+K + + E +K Q E I+ +L+HP
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLH--TLRQRQPGKYFSEQAVKF-YVAEVLLALEYL 331
+ LY +VMEF P GDL+ L + P K+ +VK + ++ L +EY+
Sbjct: 85 IVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKW----SVKLRLMLDIALGIEYM 138
Query: 332 HMLG--IVYRDLKPENVLVR 349
IV+RDL+ N+ ++
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQ 158
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 451 FVGTHEYLAPEIIKGE--GHGSAVDWWTFGIFLYELLFGKTPF 491
+G +++APE I E + D ++F + LY +L G+ PF
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 10/151 (6%)
Query: 215 FRLLKKLGCGDIGSVY-LSELTGTKCYFAMKVMD--KASLEKRKKLLRAQTEREILQSLD 271
F+ L +LG G G V+ + + Y + M + ++ +KL + ++ Q
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ--- 115
Query: 272 HPFLPTLYTHFETDKFSCLVMEFC-PGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEY 330
HP L +E L E C P H G E V Y+ + LLAL +
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCGPSLQQHC---EAWGASLPEAQVWGYLRDTLLALAH 172
Query: 331 LHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
LH G+V+ D+KP N+ + G L DF L
Sbjct: 173 LHSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 72
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+M+ P G L R+ Q + + ++
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 130
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 131 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K++ +R+ L RA I++ +D L
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 83
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVY 338
Y K +VME GG+L + Q + + F+E+ + + A++YLH + I +
Sbjct: 84 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 339 RDLKPENVLV---REDGHIMLSDFDLS 362
RD+KPEN+L R + + L+DF +
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFA 167
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Query: 465 GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRFPESPVVSF 518
GE + + D W+ G+ +Y LL G PF + A T + PE VS
Sbjct: 172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 231
Query: 519 SARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
+ LI+ LL EP R+ TE HP+
Sbjct: 232 EVKMLIRNLLKTEPTQRMTI----TEFMNHPWI 260
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L + +LL+ +G G+ G V L + G K A+K + + + E ++
Sbjct: 18 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQA-----FLAEASVMTQ 70
Query: 270 LDHPFLPTLYTHFETDKFSC-LVMEFCPGGDL-HTLRQRQPGKYFSEQAVKFYVAEVLLA 327
L H L L +K +V E+ G L LR R + +KF + +V A
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCEA 129
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+EYL V+RDL NVLV ED +SDF L+
Sbjct: 130 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF 491
++ APE ++ + + D W+FGI L+E+ FG+ P+
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVM----DKASLEKRKKLLRAQTEREILQSLDHPF 274
K++G G G V+ L K A+K + + E +K Q E I+ +L+HP
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLH--TLRQRQPGKYFSEQAVKF-YVAEVLLALEYL 331
+ LY +VMEF P GDL+ L + P K+ +VK + ++ L +EY+
Sbjct: 85 IVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKW----SVKLRLMLDIALGIEYM 138
Query: 332 HMLG--IVYRDLKPENVLVR 349
IV+RDL+ N+ ++
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQ 158
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 451 FVGTHEYLAPEIIKGE--GHGSAVDWWTFGIFLYELLFGKTPF 491
+G +++APE I E + D ++F + LY +L G+ PF
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSEL--TGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
V + L K+G G G V+ + TG K +M+ EK + A E +ILQ
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQL 73
Query: 270 LDHPFLPTLYTHFETDK---FSC-----LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYV 321
L H + L T C LV +FC DL L K F+ +K +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRVM 131
Query: 322 AEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+L L Y+H I++RD+K NVL+ DG + L+DF L+
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 194 DAQWEAIQAVRVKDGVLGV-GHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLE 252
D+Q+ ++Q V D V ++ LK +G G G V + T A+K + + +
Sbjct: 5 DSQFYSVQ---VADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQ 60
Query: 253 KRKKLLRAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQR 306
+ RA E +L+ ++H + +L F E + LVME +
Sbjct: 61 NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME 120
Query: 307 QPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL----S 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L S
Sbjct: 121 -----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
Query: 363 LRCAVSPTVV 372
++P VV
Sbjct: 176 TNFMMTPYVV 185
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV 503
TN +V T Y APE+I G G+ VD W+ G + EL+ G F+G+++ V
Sbjct: 176 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKV 235
Query: 504 VGQ 506
+ Q
Sbjct: 236 IEQ 238
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 38 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 87
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E+ G L + ++ ++ Q V + +
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 146
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YL +G V+RDL N+L+ + +SDF LS
Sbjct: 147 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 258
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVM----DKASLEKRKKLLRAQTEREILQSLDHPF 274
K++G G G V+ L K A+K + + E +K Q E I+ +L+HP
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLH--TLRQRQPGKYFSEQAVKF-YVAEVLLALEYL 331
+ LY +VMEF P GDL+ L + P K+ +VK + ++ L +EY+
Sbjct: 85 IVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKW----SVKLRLMLDIALGIEYM 138
Query: 332 HMLG--IVYRDLKPENVLVR 349
IV+RDL+ N+ ++
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQ 158
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 451 FVGTHEYLAPEIIKGE--GHGSAVDWWTFGIFLYELLFGKTPF 491
+G +++APE I E + D ++F + LY +L G+ PF
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 285 DKFSCLVMEFCPGGDLHTLRQR--QPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLK 342
+K+ ++ME+ P LH + + + G+ + Y+ ++ A+ ++H LGI +RD+K
Sbjct: 110 NKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIK 168
Query: 343 PENVLVR-EDGHIMLSDF 359
P+N+LV +D + L DF
Sbjct: 169 PQNLLVNSKDNTLKLCDF 186
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 448 SMSFVGTHEYLAPEIIKGEG-HGSAVDWWTFGIFLYELLFGKTPFKGS---ENRATLYNV 503
S++ + + Y APE++ G + ++D W+ G EL+ GK F G + + +
Sbjct: 198 SVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQI 257
Query: 504 VGQP--------------LRFPESPVVSFS----------ARDLIKGLLVKEPQNRLACR 539
+G P +RFP + A DL++ +L EP R+
Sbjct: 258 MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI--- 314
Query: 540 RGATEIKQHPFF 551
E HPFF
Sbjct: 315 -NPYEAMAHPFF 325
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 50 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E+ G L + ++ ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YL +G V+RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 21 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 70
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E+ G L + ++ ++ Q V + +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 129
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YL +G V+RDL N+L+ + +SDF LS
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 241
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 202 AVRVKDGVLGV-GHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRA 260
+V V D V ++ LK +G G G V + T A+K + + + + RA
Sbjct: 12 SVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHAKRA 70
Query: 261 QTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSE 314
E +L+ ++H + +L F E + LVME +
Sbjct: 71 YRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDH 125
Query: 315 QAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 444 TNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNV 503
TN +V T Y APE+I G G+ + VD W+ G + EL+ G F+G+++ V
Sbjct: 178 TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKV 237
Query: 504 VGQ 506
+ Q
Sbjct: 238 IEQ 240
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 69
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+M+ P G L R+ Q + + ++
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 127
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L + +LL+ +G G+ G V L + G K A+K + + + E ++
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQA-----FLAEASVMTQ 55
Query: 270 LDHPFLPTLYTHFETDKFSC-LVMEFCPGGDL-HTLRQRQPGKYFSEQAVKFYVAEVLLA 327
L H L L +K +V E+ G L LR R + +KF + +V A
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCEA 114
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+EYL V+RDL NVLV ED +SDF L+
Sbjct: 115 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPF 491
++ APE ++ + + D W+FGI L+E+ FG+ P+
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF------ 510
Y+APE++ E + + D W+ G+ +Y LL G PF + +A + + + +R
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA-ISPGMKRRIRLGQYGFP 253
Query: 511 -PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS A+ LI+ LL +P RL T+ HP+
Sbjct: 254 NPEWSEVSEDAKQLIRLLLKTDPTERLT----ITQFMNHPWI 291
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV- 348
++ME GG+L + Q + + F+E+ + ++ A+++LH I +RD+KPEN+L
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 349 --REDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEPSCIQPSC-- 404
+D + L+DF + K +T + Y V P + P SC
Sbjct: 163 SKEKDAVLKLTDFGFA----------KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDM 212
Query: 405 ------IAPTTCFSPRFFSKSKKAQKP----KNEMGNQVSPLPELIAEPTNARSM 449
+ C P F+S + +A P + +G P PE +A+ +
Sbjct: 213 WSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQL 267
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 70
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+M+ P G L R+ Q + + ++
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 128
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRF------ 510
Y+APE++ E + + D W+ G+ +Y LL G PF + +A + + + +R
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQA-ISPGMKRRIRLGQYGFP 234
Query: 511 -PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS A+ LI+ LL +P RL T+ HP+
Sbjct: 235 NPEWSEVSEDAKQLIRLLLKTDPTERLT----ITQFMNHPWI 272
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV- 348
++ME GG+L + Q + + F+E+ + ++ A+++LH I +RD+KPEN+L
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 349 --REDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKNPVYCVQPACIEPSCIQPSC-- 404
+D + L+DF + K +T + Y V P + P SC
Sbjct: 144 SKEKDAVLKLTDFGFA----------KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDM 193
Query: 405 ------IAPTTCFSPRFFSKSKKAQKP----KNEMGNQVSPLPELIAEPTNARSM 449
+ C P F+S + +A P + +G P PE +A+ +
Sbjct: 194 WSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQL 248
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 68
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+M+ P G L R+ Q + + ++
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 126
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVYLSEL---TGTKCYFAMKVMDKASLEKRKKLLRAQTERE 265
++G RLL+KLG G G V E +G A+K + L + + + E
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 67
Query: 266 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVL 325
+ SLDH L LY T +V E P G L R R+ +F + Y +V
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 125
Query: 326 LALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
+ YL ++RDL N+L+ + + DF L
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE +K A D W FG+ L+E+ +G+ P+ G L+ + + R P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 106/260 (40%), Gaps = 21/260 (8%)
Query: 219 KKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTL 278
+K+G G G+V+ +E G+ + + E+ + LR E I++ L HP +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLR---EVAIMKRLRHPNIVLF 99
Query: 279 YTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLG-- 335
+V E+ G L+ L + + ++ + +A +V + YLH
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 336 IVYRDLKPENVLVREDGHIMLSDFDLSL----------RCAVSPTVVKSSTLESEPLR-K 384
IV+R+LK N+LV + + + DF LS A +P + L EP K
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 385 NPVYCVQPACIEPSCIQPSC--IAPTTCFSPRFFSKSKKAQKPKNEMGNQVSPLPELIAE 442
+ VY E + +Q + P + F K K+ + P+N + QV+ + E
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF-KCKRLEIPRN-LNPQVAAIIEGCWT 277
Query: 443 PTNARSMSFVGTHEYLAPEI 462
+ SF + L P I
Sbjct: 278 NEPWKRPSFATIMDLLRPLI 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 448 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVG-- 505
S S GT E++APE+++ E D ++FG+ L+EL + P+ G+ N A + VG
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFK 254
Query: 506 -QPLRFPESPVVSFSARDLIKGLLVKEPQNR 535
+ L P + +A +I+G EP R
Sbjct: 255 CKRLEIPRNLNPQVAA--IIEGCWTNEPWKR 283
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 71
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+M+ P G L R+ Q + + ++
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 129
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 130 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSEL--TGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
V + L K+G G G V+ + TG K +M+ EK + A E +ILQ
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQL 72
Query: 270 LDHPFLPTLYTHFETDK---FSC-----LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYV 321
L H + L T C LV +FC DL L K F+ +K +
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRVM 130
Query: 322 AEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+L L Y+H I++RD+K NVL+ DG + L+DF L+
Sbjct: 131 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 73
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ +++EF G+L + + S + + ++ A+EYL ++R
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 340 DLKPENVLVREDGHIMLSDFDLS 362
DL N LV E+ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 50 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E+ G L + ++ ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YL +G V+RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++G +
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 254
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 255 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 162
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L + +K LG G G+VY + E K A+K++++ + K + E
Sbjct: 34 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN--VEFMDEA 91
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
I+ S+DHP L L + LV + P G L S+ + + V ++
Sbjct: 92 LIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCV-QI 149
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 150 AKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + D L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA 172
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 12/158 (7%)
Query: 206 KDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMK-VMDKASLEKRKKLLRAQTER 264
+D VLG +++G G+ G V+ L A+K + + + K L+ E
Sbjct: 114 EDLVLG-------EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ---EA 163
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
IL+ HP + L + +VME GGD T R G + + V +
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDA 222
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+EYL ++RDL N LV E + +SDF +S
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRAT 499
++ APE + + S D W+FGI L+E G +P+ N+ T
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++G +
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 254
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 255 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 162
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 50 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E+ G L + ++ ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YL +G V+RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLDH 272
F+ ++ +G G G V+ ++ ++ K + KR K + ERE+ L LDH
Sbjct: 13 FKEIELIGSGGFGQVFKAK---------HRIDGKTYVIKRVKYNNEKAEREVKALAKLDH 63
Query: 273 PFLPTL---YTHFETD-----------KFSCLV--MEFCPGGDLHTLRQRQPGKYFSEQA 316
+ + F+ D K CL MEFC G L +++ G+ +
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 317 VKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
++ ++Y+H ++ RDLKP N+ + + + + DF L
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
GT Y++PE I + +G VD + G+ L ELL T F+ S+ L + +
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGII------ 236
Query: 512 ESPVVSFSARDLIKGLLVKEPQNR 535
S + + L++ LL K+P++R
Sbjct: 237 -SDIFDKKEKTLLQKLLSKKPEDR 259
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
L+Y+H I++RDLKP N+ V ED + + D
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 50 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E+ G L + ++ ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YL +G V+RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 50 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E+ G L + ++ ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YL +G V+RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++G +
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 253
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 254 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 161
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 48 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 97
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E+ G L + ++ ++ Q V + +
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 156
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YL +G V+RDL N+L+ + +SDF LS
Sbjct: 157 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 268
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
L+Y+H I++RDLKP N+ V ED + + D
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
LK+LG G G V + G + A+K++ + S+ + + + E +++ +L H L
Sbjct: 19 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 73
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY + ++ E+ G L + ++ ++Q ++ +V A+EYL
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 132
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV + G + +SDF LS
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLS 158
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 460 PEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRF 510
PE++ S D W FG+ ++E+ GK P++ N T + + Q LR
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 231
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 12/158 (7%)
Query: 206 KDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMK-VMDKASLEKRKKLLRAQTER 264
+D VLG +++G G+ G V+ L A+K + + + K L+ E
Sbjct: 114 EDLVLG-------EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ---EA 163
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
IL+ HP + L + +VME GGD T R G + + V +
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDA 222
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+EYL ++RDL N LV E + +SDF +S
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRAT 499
++ APE + + S D W+FGI L+E G +P+ N+ T
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ +++EF G+L + + S + + ++ A+EYL ++R
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 340 DLKPENVLVREDGHIMLSDFDLS 362
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 152 KPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 212 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDK--ASLEKRKKLLRAQTEREILQSLDH 272
++ L +G G GSV + T T A+K + + S+ K+ R E +L+ + H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 80
Query: 273 PFLPTLYTHF----ETDKFS-CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLA 327
+ L F ++F+ ++ G DL+ + + Q ++ V+F + ++L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 328 LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
L+Y+H I++RDLKP N+ V ED + + F L+
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA 172
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
LK+LG G G V + G + A+K++ + S+ + + + E +++ +L H L
Sbjct: 12 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 66
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY + ++ E+ G L + ++ ++Q ++ +V A+EYL
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 125
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV + G + +SDF LS
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLS 151
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 460 PEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRF 510
PE++ S D W FG+ ++E+ GK P++ N T + + Q LR
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 224
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ +++EF G+L + + S + + ++ A+EYL ++R
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 340 DLKPENVLVREDGHIMLSDFDLS 362
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 424 KPKNEMGNQVSPLPEL---IAEPTNARSMSFVGTHEYLAPEIIKGEGH-GSAVDWWTFGI 479
KP N N+ L L +A T+ +V T Y APEI+ H VD W+ G
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 480 FLYELLFGKTPFKGSENRATL---YNVVGQPLRFPESPVVSFSARDLIKGL 527
+ ELL G+T F G+++ L +VG P + S SAR+ I+ L
Sbjct: 208 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 312 FSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ V+F + ++L L+Y+H I++RDLKP N+ V ED + + DF L+
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVYLSEL---TGTKCYFAMKVMDKASLEKRKKLLRAQTERE 265
++G RLL+KLG G G V E +G A+K + L + + + E
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 266 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVL 325
+ SLDH L LY T +V E P G L R R+ +F + Y +V
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 131
Query: 326 LALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
+ YL ++RDL N+L+ + + DF L
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE +K A D W FG+ L+E+ +G+ P+ G L+ + + R P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
LK+LG G G V + G + A+K++ + S+ + + + E +++ +L H L
Sbjct: 13 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 67
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY + ++ E+ G L + ++ ++Q ++ +V A+EYL
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 126
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV + G + +SDF LS
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLS 152
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 460 PEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRF 510
PE++ S D W FG+ ++E+ GK P++ N T + + Q LR
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 225
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+L+K+LG G G V++ G A+K + ++ L AQ I++ L H
Sbjct: 11 LQLIKRLGNGQFGEVWMGTWNGN-TKVAIKTLKPGTMSPESFLEEAQ----IMKKLKHDK 65
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L LY + +V E+ G L + G+ + A+V + Y+ +
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV ++DF L+
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLA 152
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 473 DWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESPVVSFSARDLIKGLLVKE 531
D W+FGI L EL+ G+ P+ G NR L V + R P S +L+ K+
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVLEQ-VERGYRMPCPQDCPISLHELMIHCWKKD 246
Query: 532 PQNR 535
P+ R
Sbjct: 247 PEER 250
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 216 RLLKKLGCGDIGSVYLSELTG------TKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
R +++LG G VY L G T+ + DKA R++ R LQ
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ- 70
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQP----GKYFSEQAVK------ 318
HP + L D+ ++ +C GDLH L R P G ++ VK
Sbjct: 71 --HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128
Query: 319 ---FYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
VA++ +EYL +V++DL NVLV + ++ +SD L
Sbjct: 129 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+ DG + VG +++G G G+VY + G A+K+++ + ++L + E
Sbjct: 10 IPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEV 60
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+L+ H + L+ + T +V ++C G L+ K+ + + +
Sbjct: 61 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQT 118
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 119 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 510 FPE 512
P+
Sbjct: 233 SPD 235
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 73
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ ++ EF G+L + + S + + ++ A+EYL ++R
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 340 DLKPENVLVREDGHIMLSDFDLS 362
DL N LV E+ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++G +
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 254
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 255 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 162
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++G +
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 253
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 254 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 161
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++G +
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 254
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 255 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 162
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 216 RLLKKLGCGDIGSVYLSELTG------TKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
R +++LG G VY L G T+ + DKA R++ R LQ
Sbjct: 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ- 87
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQP----GKYFSEQAVK------ 318
HP + L D+ ++ +C GDLH L R P G ++ VK
Sbjct: 88 --HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 145
Query: 319 ---FYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
VA++ +EYL +V++DL NVLV + ++ +SD L
Sbjct: 146 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++G +
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 253
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 254 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 161
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E+ D L Q ++ ++FY+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 111 ALVFEYINNTDFKQLYQ-----ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+ DG + VG +++G G G+VY + G A+K+++ + ++L + E
Sbjct: 7 IPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEV 57
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+L+ H + L+ + T +V ++C G L+ K+ + + +
Sbjct: 58 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQT 115
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 116 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 153
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 229
Query: 510 FPE 512
P+
Sbjct: 230 SPD 232
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVYLSEL---TGTKCYFAMKVMDKASLEKRKKLLRAQTERE 265
++G RLL+KLG G G V E +G A+K + L + + + E
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 266 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVL 325
+ SLDH L LY T +V E P G L R R+ +F + Y +V
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 131
Query: 326 LALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
+ YL ++RDL N+L+ + + DF L
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE +K A D W FG+ L+E+ +G+ P+ G L+ + + R P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
LK+LG G G V + G + A+K++ + S+ + + + E +++ +L H L
Sbjct: 13 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 67
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY + ++ E+ G L + ++ ++Q ++ +V A+EYL
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 126
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV + G + +SDF LS
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLS 152
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 460 PEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRF 510
PE++ S D W FG+ ++E+ GK P++ N T + + Q LR
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 225
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+ DG + VG +++G G G+VY + G A+K+++ + ++L + E
Sbjct: 10 IPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEV 60
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+L+ H + L+ + T +V ++C G L+ K+ + + +
Sbjct: 61 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQT 118
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 119 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 510 FPE 512
P+
Sbjct: 233 SPD 235
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 282
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ ++ EF G+L + + S + + ++ A+EYL ++R
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342
Query: 340 DLKPENVLVREDGHIMLSDFDLS 362
+L N LV E+ + ++DF LS
Sbjct: 343 NLAARNCLVGENHLVKVADFGLS 365
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+ DG + VG +++G G G+VY + G A+K+++ + ++L + E
Sbjct: 5 IPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEV 55
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+L+ H + L+ + T +V ++C G L+ K+ + + +
Sbjct: 56 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQT 113
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 510 FPE 512
P+
Sbjct: 228 SPD 230
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 15/147 (10%)
Query: 220 KLGCGDIGSVYL--SELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPT 277
+LG G G V+ + TG +C + K LE + R + E L P +
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQC-----AVKKVRLE----VFRVE-ELVACAGLSSPRIVP 128
Query: 278 LYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIV 337
LY + + ME GG L L +Q G ++A+ +Y+ + L LEYLH I+
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSLGQL-IKQMGCLPEDRAL-YYLGQALEGLEYLHTRRIL 186
Query: 338 YRDLKPENVLVREDG-HIMLSDFDLSL 363
+ D+K +NVL+ DG L DF +L
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHAL 213
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
GT ++APE++ G+ + VD W+ + +L G P+
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+ DG + VG +++G G G+VY + G A+K+++ + ++L + E
Sbjct: 33 IPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEV 83
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+L+ H + L+ + T +V ++C G L+ K+ + + +
Sbjct: 84 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQT 141
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 142 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 510 FPE 512
P+
Sbjct: 256 SPD 258
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ ++ EF G+L + + S + + ++ A+EYL ++R
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 340 DLKPENVLVREDGHIMLSDFDLS 362
DL N LV E+ + ++DF LS
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS 163
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
LK+LG G G V + G + A+K++ + S+ + + + E +++ +L H L
Sbjct: 8 FLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFI----EEAKVMMNLSHEKLV 62
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
LY + ++ E+ G L + ++ ++Q ++ +V A+EYL
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQF 121
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV + G + +SDF LS
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLS 147
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 460 PEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRF 510
PE++ S D W FG+ ++E+ GK P++ N T + + Q LR
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 220
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+ DG + VG +++G G G+VY + G A+K+++ + ++L + E
Sbjct: 25 IPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEV 75
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+L+ H + L+ + T +V ++C G L+ K+ + + +
Sbjct: 76 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQT 133
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 134 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 247
Query: 510 FPE 512
P+
Sbjct: 248 SPD 250
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
LV E+ D L Q ++ ++FY+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 116 ALVFEYINNTDFKQLYQ-----ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 170
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVYLSEL---TGTKCYFAMKVMDKASLEKRKKLLRAQTERE 265
++G RLL+KLG G G V E +G A+K + L + + + E
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 266 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVL 325
+ SLDH L LY T +V E P G L R R+ +F + Y +V
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 121
Query: 326 LALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
+ YL ++RDL N+L+ + + DF L
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE +K A D W FG+ L+E+ +G+ P+ G L+ + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L P + LY + + ME GG L L +Q G ++A+ +Y+ + L LE
Sbjct: 107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL-IKQMGCLPEDRAL-YYLGQALEGLE 164
Query: 330 YLHMLGIVYRDLKPENVLVREDG-HIMLSDFDLSL 363
YLH I++ D+K +NVL+ DG L DF +L
Sbjct: 165 YLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 199
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
GT ++APE++ G+ + VD W+ + +L G P+
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+ DG + VG +++G G G+VY + G A+K+++ + ++L + E
Sbjct: 32 IPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEV 82
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+L+ H + L+ + T +V ++C G L+ K+ + + +
Sbjct: 83 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQT 140
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 141 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 254
Query: 510 FPE 512
P+
Sbjct: 255 SPD 257
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+ DG + VG +++G G G+VY + G A+K+++ + ++L + E
Sbjct: 5 IPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEV 55
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+L+ H + L+ + T +V ++C G L+ K+ + + +
Sbjct: 56 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQT 113
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 510 FPE 512
P+
Sbjct: 228 SPD 230
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 76
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ +++EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLS 159
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+ DG + VG +++G G G+VY + G A+K+++ + ++L + E
Sbjct: 33 IPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEV 83
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+L+ H + L+ + T +V ++C G L+ K+ + + +
Sbjct: 84 GVLRKTRHVNI-LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQT 141
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 142 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 510 FPE 512
P+
Sbjct: 256 SPD 258
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 50 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E+ G L + ++ ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YL +G V+RDL N+L+ + +SDF L+
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 8/155 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 70
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+M+ P G L R+ Q + + ++
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 128
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
+ YL +V+RDL NVLV+ H+ ++DF
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
FRL +K+G G G +YL T A+K+ + + K +LL ILQ
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQG--GTG 64
Query: 275 LPTLYTHFETDKFSCLVMEFCPGG--DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH 332
+P + ++ LVM+ DL R+ S + V +++ +E++H
Sbjct: 65 IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK----LSLKTVLMLADQMINRVEFVH 120
Query: 333 MLGIVYRDLKPENVLV---REDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLRKN 385
++RD+KP+N L+ R + + DF L+ + +ST + P R+N
Sbjct: 121 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR------DTSTHQHIPYREN 170
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVYLSEL---TGTKCYFAMKVMDKASLEKRKKLLRAQTERE 265
++G RLL+KLG G G V E +G A+K + L + + + E
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 67
Query: 266 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVL 325
+ SLDH L LY T +V E P G L R R+ +F + Y +V
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 125
Query: 326 LALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
+ YL ++RDL N+L+ + + DF L
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE +K A D W FG+ L+E+ +G+ P+ G L+ + + R P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ ++ EF G+L + + S + + ++ A+EYL ++R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 340 DLKPENVLVREDGHIMLSDFDLS 362
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVYLSEL---TGTKCYFAMKVMDKASLEKRKKLLRAQTERE 265
++G RLL+KLG G G V E +G A+K + L + + + E
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 266 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVL 325
+ SLDH L LY T +V E P G L R R+ +F + Y +V
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 121
Query: 326 LALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
+ YL ++RDL N+L+ + + DF L
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE +K A D W FG+ L+E+ +G+ P+ G L+ + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 8/155 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 70
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+M+ P G L R+ Q + + ++
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 128
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
+ YL +V+RDL NVLV+ H+ ++DF
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 8/155 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 72
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+M+ P G L R+ Q + + ++
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 130
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
+ YL +V+RDL NVLV+ H+ ++DF
Sbjct: 131 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L + +K LG G G+VY + E K A+K++++ + K + E
Sbjct: 11 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN--VEFMDEA 68
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
I+ S+DHP L L + LV + P G L S+ + + V ++
Sbjct: 69 LIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCV-QI 126
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 127 AKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 73
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ ++ EF G+L + + S + + ++ A+EYL ++R
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 340 DLKPENVLVREDGHIMLSDFDLS 362
DL N LV E+ + ++DF LS
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS 156
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
VK G L G + +++KLG G +V+LS K + AMKV+ A L + +
Sbjct: 29 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLK 88
Query: 265 EILQSL----DHPFLPTLYTHFETDKFS----CLVMEFCPGGDLHTLRQRQPGKY--FSE 314
+ S + + L F+ + C+V E H L+ Y
Sbjct: 89 SVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGH---HLLKWIIKSNYQGLPL 145
Query: 315 QAVKFYVAEVLLALEYLHM-LGIVYRDLKPENVLV 348
VK + +VL L+YLH I++ D+KPEN+L+
Sbjct: 146 PCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+ DG + VG +++G G G+VY + G A+K+++ + ++L + E
Sbjct: 5 IPDGQITVG-----QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEV 55
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
+L+ H + L+ + T +V ++C G L+ K+ + + +
Sbjct: 56 GVLRKTRHVNI-LLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI-ARQT 113
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YLH I++RDLK N+ + ED + + DF L+
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 453 GTHEYLAPEIIKGEG---HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 510 FPE 512
P+
Sbjct: 228 SPD 230
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L P + LY + + ME GG L L +Q G ++A+ +Y+ + L LE
Sbjct: 123 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL-IKQMGCLPEDRAL-YYLGQALEGLE 180
Query: 330 YLHMLGIVYRDLKPENVLVREDG-HIMLSDFDLSL 363
YLH I++ D+K +NVL+ DG L DF +L
Sbjct: 181 YLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 215
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
GT ++APE++ G+ + VD W+ + +L G P+
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVM-DKASLEKRKKLLRAQTE 263
+L R +K LG G G+VY + + K A+KV+ + S + K++L E
Sbjct: 13 ILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEIL---DE 69
Query: 264 REILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAE 323
++ + P++ L T LV + P G L + G+ S+ + + +
Sbjct: 70 AYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLN-WCMQ 127
Query: 324 VLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + YL + +V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 IAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
R+K L+ E ++ DHP + L T+ ++ME C G+L + Q + KY
Sbjct: 58 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 111
Query: 314 EQA-VKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ A + Y ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 112 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQ 506
+++APE I SA D W FG+ ++E+L G PF+G +N +V+G+
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 227
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 23/151 (15%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVM--DKA---SLEKRKKLLR----AQTERE 265
+ L++KLG G +V+L++ + AMK++ DK + E KLL+ A +E
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 266 -------ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVK 318
IL+ LDH + H + +++ G +L L ++ + VK
Sbjct: 81 DSMGANHILKLLDH------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK 134
Query: 319 FYVAEVLLALEYLHM-LGIVYRDLKPENVLV 348
++LL L+Y+H GI++ D+KPENVL+
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA 498
+ T EY +PE++ G G D W+ ++EL+ G F+ E +
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHS 242
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ +++EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS 163
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 202 AVRVKDGVLGV-GHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRA 260
+V V D V ++ LK +G G G V + A+K + + + + RA
Sbjct: 50 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRA 108
Query: 261 QTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSE 314
E +++ ++H + +L F E + LVME ++
Sbjct: 109 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDH 163
Query: 315 QAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 44/142 (30%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 531 EPQNRLACRRGATEIKQHPFFQ 552
+P R++ + QHP+
Sbjct: 343 DPAKRIS----VDDALQHPYIN 360
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
R+K L+ E ++ DHP + L T+ ++ME C G+L + Q + KY
Sbjct: 60 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 113
Query: 314 EQA-VKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ A + Y ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQ 506
+++APE I SA D W FG+ ++E+L G PF+G +N +V+G+
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 229
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 262 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH-TLRQRQPGKYFSEQAVKFY 320
E L ++HP + LY CLVME+ GG L+ L +P Y++ +
Sbjct: 51 VELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 108
Query: 321 VAEVLLALEYLHML---GIVYRDLKPENVLVREDGHIM-LSDF 359
+ + YLH + +++RDLKP N+L+ G ++ + DF
Sbjct: 109 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF 151
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
G+ ++APE+ +G + D +++GI L+E++ + PF
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLL--RAQTEREILQSLDHPFLPTL 278
LG G G V T+ FA+K + +R+ L RA I++ +D +
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVD------V 123
Query: 279 YTHFETDKFSCLVMEFC-PGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIV 337
Y + + L++ C GG+L + Q + + F+E+ + A++YLH + I
Sbjct: 124 YENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIA 183
Query: 338 YRDLKPENVLV---REDGHIMLSDF 359
+RD+KPEN+L R + + L+DF
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDF 208
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 10/101 (9%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA------TLYNVVGQPLRF 510
Y+APE++ E + + D W+ G+ Y LL G PF + A T
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPN 288
Query: 511 PESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
PE VS + LI+ LL EP R TE HP+
Sbjct: 289 PEWSEVSEEVKXLIRNLLKTEPTQRXTI----TEFXNHPWI 325
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 267 LQSLDHPFLPTLYTHF--ETDKFSCLVMEFCPGG-DLHTLRQRQPGKYFSEQAVKFYVAE 323
++++D PF T Y E D + C ME D + G+ E +
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWIC--MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVS 161
Query: 324 VLLALEYLH-MLGIVYRDLKPENVLVREDGHIMLSDFDLS--LRCAVSPTVVKSSTLESE 380
++ ALE+LH L +++RD+KP NVL+ G + + DF +S L +V+ T+
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMA 221
Query: 381 PLRKNP 386
P R NP
Sbjct: 222 PERINP 227
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
VK G L G + +++KLG G +V+LS K + AMKV+ A L + +
Sbjct: 13 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLK 72
Query: 265 EILQSL----DHPFLPTLYTHFETDKFS----CLVMEFCPGGDLHTLRQRQPGKY--FSE 314
+ S + + L F+ + C+V E H L+ Y
Sbjct: 73 SVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGH---HLLKWIIKSNYQGLPL 129
Query: 315 QAVKFYVAEVLLALEYLHM-LGIVYRDLKPENVLV 348
VK + +VL L+YLH I++ D+KPEN+L+
Sbjct: 130 PCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 164
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 21 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 70
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E G L + ++ ++ Q V + +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 129
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YL +G V+RDL N+L+ + +SDF LS
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 241
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+ ++ EF G+L + + S + + ++ A+EYL ++R
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 340 DLKPENVLVREDGHIMLSDFDLS 362
DL N LV E+ + ++DF LS
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS 158
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
R+K L+ E ++ DHP + L T+ ++ME C G+L + Q + KY
Sbjct: 83 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 136
Query: 314 EQA-VKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ A + Y ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 137 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQ 506
+++APE I SA D W FG+ ++E+L G PF+G +N +V+G+
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 252
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 50 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E+ G L + ++ ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
++YL +G V+RDL N+L+ + +SDF L
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVYLSEL---TGTKCYFAMKVMDKASLEKRKKLLRAQTERE 265
++G RLL+KLG G G V E +G A+K + L + + + E
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 266 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVL 325
+ SLDH L LY T +V E P G L R R+ +F + Y +V
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLD-RLRKHQGHFLLGTLSRYAVQVA 121
Query: 326 LALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
+ YL ++RDL N+L+ + + DF L
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE +K A D W FG+ L+E+ +G+ P+ G L+ + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 23/151 (15%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVM--DKA---SLEKRKKLLR----AQTERE 265
+ L++KLG G +V+L++ + AMK++ DK + E KLL+ A +E
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 266 -------ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVK 318
IL+ LDH + H + +++ G +L L ++ + VK
Sbjct: 81 DSMGANHILKLLDH------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK 134
Query: 319 FYVAEVLLALEYLHM-LGIVYRDLKPENVLV 348
++LL L+Y+H GI++ D+KPENVL+
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA 498
+ T EY +PE++ G G D W+ ++EL+ G F+ E +
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHS 242
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
R+K L+ E ++ DHP + L T+ ++ME C G+L + Q + KY
Sbjct: 57 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 110
Query: 314 EQA-VKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ A + Y ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 111 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQ 506
+++APE I SA D W FG+ ++E+L G PF+G +N +V+G+
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 226
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++G +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 221
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 222 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 129
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 68
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDY-VREHKDNIGSQYLLNWCVQI 126
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 262 TEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLH-TLRQRQPGKYFSEQAVKFY 320
E L ++HP + LY CLVME+ GG L+ L +P Y++ +
Sbjct: 50 VELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107
Query: 321 VAEVLLALEYLHML---GIVYRDLKPENVLVREDGHIM-LSDF 359
+ + YLH + +++RDLKP N+L+ G ++ + DF
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF 150
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPF 491
G+ ++APE+ +G + D +++GI L+E++ + PF
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 201 QAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTG---TKCYFAMKVMDKASLEKRKKL 257
+AVR + V + ++ + +G G+ G V L + A+K + E++++
Sbjct: 4 EAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE 63
Query: 258 LRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAV 317
+E I+ +HP + L ++ EF G L + + G++ Q V
Sbjct: 64 F--LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 121
Query: 318 KFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + YL + V+RDL N+LV + +SDF LS
Sbjct: 122 GM-LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 436 LPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGS 494
L E ++PT S+ + APE I SA D W++GI ++E++ FG+ P+
Sbjct: 168 LEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 227
Query: 495 ENRATLYNVVGQPLRFPESP 514
N+ + N + Q R P P
Sbjct: 228 SNQDVI-NAIEQDYRLPPPP 246
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 69 RAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 531 EPQNRLACRRGATEIKQHPFF 551
+P R++ QHP+
Sbjct: 305 DPAKRISVDDAL----QHPYI 321
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
R+K L+ E ++ DHP + L T+ ++ME C G+L + Q + KY
Sbjct: 52 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 105
Query: 314 EQA-VKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ A + Y ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 106 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQ 506
+++APE I SA D W FG+ ++E+L G PF+G +N +V+G+
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 221
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 50 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E G L + ++ ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YL +G V+RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 321
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
R+L N LV E+ + ++DF LS
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLS 404
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
R+K L+ E ++ DHP + L T+ ++ME C G+L + Q + KY
Sbjct: 55 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 108
Query: 314 EQA-VKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ A + Y ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQ 506
+++APE I SA D W FG+ ++E+L G PF+G +N +V+G+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 224
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
R+K L+ E ++ DHP + L T+ ++ME C G+L + Q + KY
Sbjct: 55 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR--KYSL 108
Query: 314 EQA-VKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ A + Y ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 109 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQ 506
+++APE I SA D W FG+ ++E+L G PF+G +N +V+G+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 224
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Query: 207 DGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
D V+G G F G++ S L + + A+K + EK+++ E I
Sbjct: 50 DKVVGAGEF--------GEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG--EASI 99
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ DHP + L K +V E G L + ++ ++ Q V + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM-LRGIAS 158
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++YL +G V+RDL N+L+ + +SDF LS
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ +PE I SA D W++GI L+E++ +G+ P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
VK G L G + +++KLG G +V+L K + AMKV+ A L + +
Sbjct: 23 VKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLK 82
Query: 265 EILQSL----DHPFLPTLYTHFETDKFS----CLVMEFCPGGDLHTLRQRQPGKY--FSE 314
+ +S + + L F+ + C+V E H L+ Y
Sbjct: 83 CVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGH---HLLKWIIKSNYQGLPV 139
Query: 315 QAVKFYVAEVLLALEYLH-MLGIVYRDLKPENVLVRED 351
+ VK + +VL L+YLH I++ D+KPEN+L+ D
Sbjct: 140 RCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVD 177
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 69 RAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 52/142 (36%), Gaps = 44/142 (30%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 531 EPQNRLACRRGATEIKQHPFFQ 552
+P R++ QHP+
Sbjct: 305 DPAKRISVDDAL----QHPYIN 322
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 107 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 161
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 162 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 44/141 (31%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 531 EPQNRLACRRGATEIKQHPFF 551
+P R++ + QHP+
Sbjct: 343 DPAKRIS----VDDALQHPYI 359
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS 163
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 69 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 531 EPQNRLACRRGATEIKQHPFF 551
+P R++ QHP+
Sbjct: 305 DPAKRISVDDAL----QHPYI 321
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS 163
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 76
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLS 159
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 202 AVRVKDGVLGV-GHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRA 260
+V + D V ++ LK +G G G V + + A+K + + + + RA
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRP-FQNQTHAKRA 70
Query: 261 QTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSE 314
E +++ ++H + L F E + +VME +L + Q +
Sbjct: 71 YRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME----LDH 125
Query: 315 QAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
+ + + + ++L+ +++LH GI++RDLKP N++V+ D + + DF L+ S
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
+V T Y APE+I G G+ VD W+ G+ + E++ G F G+++ V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 279
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 338
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
R+L N LV E+ + ++DF LS
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLS 362
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 62 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----L 116
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 117 DHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 166
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 44/141 (31%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 531 EPQNRLACRRGATEIKQHPFF 551
+P R++ QHP+
Sbjct: 298 DPAKRISVDDAL----QHPYI 314
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 77
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLS 160
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K L G G+VY + E K A+K + +A+ K K E
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 75
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+M+ P G L R+ Q + + ++
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 133
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 134 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 69 RAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 44/142 (30%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 531 EPQNRLACRRGATEIKQHPFFQ 552
+P R++ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYIN 322
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 70
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 128
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 75
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 133
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 134 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
VK+ + +R+++ L G + L E ++A+K +K+ LEK++ ++ ++
Sbjct: 23 VKEKDKYINDYRIIRTLNQGKFNKIILCEKDNK--FYALKKYEKSLLEKKRDFTKSNNDK 80
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVME--FCPGGDLHTLRQRQPG-------KYFSE- 314
++S F L + CL E +++ + + +YF
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVL 140
Query: 315 ----------QAVKFYVAEVLLALEYLHM-LGIVYRDLKPENVLVREDGHIMLSDF 359
Q +K + VL + Y+H I +RD+KP N+L+ ++G + LSDF
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDF 196
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 453 GTHEYLAPEIIKGEG--HGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVV 504
GT+E++ PE E +G+ VD W+ GI LY + + PF + L+N +
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 74
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 75 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 132
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 133 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 6/186 (3%)
Query: 201 QAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELT---GTKCYFAMKVMDKASLEKRKKL 257
QAVR + ++ K +G G+ G V L + A+K + +K+++
Sbjct: 17 QAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD 76
Query: 258 LRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAV 317
+E I+ DHP + L K ++ E+ G L ++ G++ Q V
Sbjct: 77 F--LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 134
Query: 318 KFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTL 377
+ + ++YL + V+RDL N+LV + +SDF +S P ++
Sbjct: 135 GM-LRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 378 ESEPLR 383
P+R
Sbjct: 194 GKIPIR 199
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE I SA D W++GI ++E++ +G+ P+ N+ + + + R P
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 254
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 71
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 129
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 130 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME +L + Q +
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
+ + + + ++L+ +++LH GI++RDLKP N++V+ D + + DF L+ S
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
+V T Y APE+I G G+ VD W+ G + E++ G F G+++ V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 79
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLS 162
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 12/143 (8%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQT---EREILQSLD 271
+RL LG G G+V+ + A+KV+ + + L + T E +L +
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 272 ----HPFLPTLYTHFETDKFSCLVMEF-CPGGDLHT-LRQRQPGKYFSEQAVKFYVAEVL 325
HP + L FET + LV+E P DL + ++ P E + + +V+
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQVV 149
Query: 326 LALEYLHMLGIVYRDLKPENVLV 348
A+++ H G+V+RD+K EN+L+
Sbjct: 150 AAIQHCHSRGVVHRDIKDENILI 172
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 450 SFVGTHEYLAPEII-KGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I + + H W+ GI LY+++ G PF+ + ++ L
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAEL 250
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
FP VS LI+ L +P +R + EI P+ Q
Sbjct: 251 HFPAH--VSPDCCALIRRCLAPKPSSRPSLE----EILLDPWMQ 288
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 71
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 129
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 130 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 217 LLKKLGCGDIGSVYLSELTGT-----KCYFAMKVMDKASLEKRKKLLRAQTEREILQSLD 271
L ++LG G G V+L+E K A+K + AS RK R E E+L +L
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHR---EAELLTNLQ 73
Query: 272 HPFLPTLY-THFETDKFSCLVMEFCPGGDLHT-LRQRQPGKYFSE---------QAVKFY 320
H + Y E D +V E+ GDL+ LR P Q+ +
Sbjct: 74 HEHIVKFYGVCVEGDPL-IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 321 VAEVLLA-LEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+A+ + A + YL V+RDL N LV E+ + + DF +S
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 68
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 126
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 71
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 129
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 130 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME +L + Q +
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
+ + + + ++L+ +++LH GI++RDLKP N++V+ D + + DF L+ S
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
+V T Y APE+I G G+ VD W+ G+ + E++ G F G+++ V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 80
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS 163
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 68 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 122
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 123 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 44/141 (31%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 243
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 244 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 303
Query: 531 EPQNRLACRRGATEIKQHPFF 551
+P R++ + QHP+
Sbjct: 304 DPAKRIS----VDDALQHPYI 320
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 70 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 124
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 125 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 44/141 (31%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 531 EPQNRLACRRGATEIKQHPFF 551
+P R++ + QHP+
Sbjct: 306 DPAKRIS----VDDALQHPYI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 69 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 44/141 (31%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 531 EPQNRLACRRGATEIKQHPFF 551
+P R++ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 70 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 124
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 125 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 44/141 (31%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 531 EPQNRLACRRGATEIKQHPFF 551
+P R++ + QHP+
Sbjct: 306 DPAKRIS----VDDALQHPYI 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 69 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 44/141 (31%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 531 EPQNRLACRRGATEIKQHPFF 551
+P R++ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 93
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 94 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 151
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 152 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 78
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 79 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 136
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 137 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 200 IQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLR 259
I V+++ V+G G F G++ S +L + + A+K + EK+++
Sbjct: 6 ISCVKIEQ-VIGAGEF--------GEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFL 56
Query: 260 AQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF 319
+E I+ DHP + L ++ EF G L + ++ G++ Q V
Sbjct: 57 --SEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 114
Query: 320 YVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + ++YL + V+R L N+LV + +SDF LS
Sbjct: 115 -LRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLS 156
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE I+ SA D W++GI ++E++ +G+ P+ N+ + N + Q R P
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI-NAIEQDYRLP 234
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 77
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLS 160
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 297 GGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIML 356
G DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + +
Sbjct: 129 GADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 185
Query: 357 SDFDLS 362
DF L+
Sbjct: 186 CDFGLA 191
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 253 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 298
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 68
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 126
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 201 QAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELT---GTKCYFAMKVMDKASLEKRKKL 257
QAVR + ++ K +G G+ G V L + A+K + +K+++
Sbjct: 2 QAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD 61
Query: 258 LRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAV 317
+E I+ DHP + L K ++ E+ G L ++ G++ Q V
Sbjct: 62 F--LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 119
Query: 318 KFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + ++YL + V+RDL N+LV + +SDF +S
Sbjct: 120 GM-LRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 163
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE I SA D W++GI ++E++ +G+ P+ N+ + + + R P
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 239
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 63 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 117
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 44/141 (31%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 531 EPQNRLACRRGATEIKQHPFF 551
+P R++ + QHP+
Sbjct: 299 DPAKRIS----VDDALQHPYI 315
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 77
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLS 160
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 266 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF------ 319
+ +S DHP + Y TD+F + +E C L+ K S++ +K
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELCN----LNLQDLVESKNVSDENLKLQKEYNP 135
Query: 320 --YVAEVLLALEYLHMLGIVYRDLKPENVLVR-------------EDGHIMLSDFDL 361
+ ++ + +LH L I++RDLKP+N+LV E+ I++SDF L
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLS 158
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 62 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 116
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 117 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 44/141 (31%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 531 EPQNRLACRRGATEIKQHPFF 551
+P R++ + QHP+
Sbjct: 298 DPAKRIS----VDDALQHPYI 314
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 88
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLS 171
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 443 PTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRA-TLY 501
P AR VGT Y++PE I G + VD ++ G+ L+ELL+ PF R TL
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238
Query: 502 NVVGQPLRFP 511
+V + L+FP
Sbjct: 239 DV--RNLKFP 246
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQSLDH 272
F ++ LG G G V+ ++ C +A+K + L R+ L R + RE+ L L+H
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIK---RIRLPNRE-LAREKVMREVKALAKLEH 62
Query: 273 PFLPTLYTHF----ETDK--------FSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFY 320
P + + + T+K + + M+ C +L + E++V +
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 321 V-AEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDL 361
+ ++ A+E+LH G+++RDLKP N+ D + + DF L
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + +L F E + LVME ++
Sbjct: 63 RAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----L 117
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 44/141 (31%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ---- 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 507 ---------------------------PLRFPES---------PVVSFSARDLIKGLLVK 530
P FP+S + + ARDL+ +LV
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 531 EPQNRLACRRGATEIKQHPFF 551
+P R++ + QHP+
Sbjct: 299 DPAKRIS----VDDALQHPYI 315
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 42/210 (20%)
Query: 194 DAQWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLS---ELTGTKCY--FAMKVM-D 247
D +WE + K+ VLG K LG G+ G V + L G Y A+K++ +
Sbjct: 15 DPKWEFPR----KNLVLG-------KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 248 KASLEKRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTL---- 303
AS + + LL +E +L+ ++HP + LY D L++E+ G L
Sbjct: 64 NASPSELRDLL---SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
Query: 304 RQRQPGKYF-------------SEQAVKF-----YVAEVLLALEYLHMLGIVYRDLKPEN 345
R+ PG E+A+ + ++ ++YL + +V+RDL N
Sbjct: 121 RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARN 180
Query: 346 VLVREDGHIMLSDFDLSLRCAVSPTVVKSS 375
+LV E + +SDF LS + VK S
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 25/117 (21%)
Query: 266 ILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF------ 319
+ +S DHP + Y TD+F + +E C L+ K S++ +K
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELCN----LNLQDLVESKNVSDENLKLQKEYNP 135
Query: 320 --YVAEVLLALEYLHMLGIVYRDLKPENVLVR-------------EDGHIMLSDFDL 361
+ ++ + +LH L I++RDLKP+N+LV E+ I++SDF L
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 220 KLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPTLY 279
KLG G G VY A+K + + ++E + L A +EI HP L L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQLL 75
Query: 280 THFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA-EVLLALEYLHMLGIVY 338
+ ++ EF G+L R+ + V Y+A ++ A+EYL ++
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 339 RDLKPENVLVREDGHIMLSDFDLS 362
RDL N LV E+ + ++DF LS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLS 158
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
R+K L+ E ++ DHP + L T+ ++ME C G+L + Q +
Sbjct: 55 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LD 109
Query: 314 EQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ Y ++ AL YL V+RD+ NVLV + + L DF LS
Sbjct: 110 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQ 506
+++APE I SA D W FG+ ++E+L G PF+G +N +V+G+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 224
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 8 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 65
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 66 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 123
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 124 AEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 286 KFSCLV--MEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKP 343
K CL MEFC G L +++ G+ + ++ ++Y+H +++RDLKP
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKP 164
Query: 344 ENVLVREDGHIMLSDFDL 361
N+ + + + + DF L
Sbjct: 165 SNIFLVDTKQVKIGDFGL 182
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 453 GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
GT Y++PE I + +G VD + G+ L ELL T F+ S+ L + +
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGII------ 250
Query: 512 ESPVVSFSARDLIKGLLVKEPQNR 535
S + + L++ LL K+P++R
Sbjct: 251 -SDIFDKKEKTLLQKLLSKKPEDR 273
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 42/210 (20%)
Query: 194 DAQWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLS---ELTGTKCY--FAMKVM-D 247
D +WE + K+ VLG K LG G+ G V + L G Y A+K++ +
Sbjct: 15 DPKWEFPR----KNLVLG-------KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 248 KASLEKRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTL---- 303
AS + + LL +E +L+ ++HP + LY D L++E+ G L
Sbjct: 64 NASPSELRDLL---SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
Query: 304 RQRQPGKYF-------------SEQAVKF-----YVAEVLLALEYLHMLGIVYRDLKPEN 345
R+ PG E+A+ + ++ ++YL + +V+RDL N
Sbjct: 121 RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN 180
Query: 346 VLVREDGHIMLSDFDLSLRCAVSPTVVKSS 375
+LV E + +SDF LS + VK S
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRS 210
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 42/210 (20%)
Query: 194 DAQWEAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLS---ELTGTKCY--FAMKVM-D 247
D +WE + K+ VLG K LG G+ G V + L G Y A+K++ +
Sbjct: 15 DPKWEFPR----KNLVLG-------KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 248 KASLEKRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTL---- 303
AS + + LL +E +L+ ++HP + LY D L++E+ G L
Sbjct: 64 NASPSELRDLL---SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES 120
Query: 304 RQRQPGKYF-------------SEQAVKF-----YVAEVLLALEYLHMLGIVYRDLKPEN 345
R+ PG E+A+ + ++ ++YL + +V+RDL N
Sbjct: 121 RKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN 180
Query: 346 VLVREDGHIMLSDFDLSLRCAVSPTVVKSS 375
+LV E + +SDF LS + VK S
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 62
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 63 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 120
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 121 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 240
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 241 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 148
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDF 174
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF-------- 319
+S DHP + Y TD+F + +E C L+ K S++ +K
Sbjct: 64 ESDDHPNVIRYYCSETTDRFLYIALELCNLN----LQDLVESKNVSDENLKLQKEYNPIS 119
Query: 320 YVAEVLLALEYLHMLGIVYRDLKPENVLVR-------------EDGHIMLSDFDL 361
+ ++ + +LH L I++RDLKP+N+LV E+ I++SDF L
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME ++
Sbjct: 71 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 125
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVV 372
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+ S +V
Sbjct: 126 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMV 185
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
FV T Y APE+I G G+ VD W+ G + E++ G F G+++ V+ Q
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 242
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 268
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 269 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 176
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 220 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 273
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 274 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 313
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 124 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 181
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDF 207
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 241
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 242 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 281
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 149
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 241
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 242 FFRQR--VSXECQHLIRWCLALRPXDRPTFE----EIQNHPWMQDV 281
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 149
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
R+K L+ E ++ DHP + L T+ ++ME C G+L + Q +
Sbjct: 435 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LD 489
Query: 314 EQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVK 373
++ Y ++ AL YL V+RD+ NVLV + + L DF LS R T K
Sbjct: 490 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYK 548
Query: 374 SS 375
+S
Sbjct: 549 AS 550
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQ 506
+++APE I SA D W FG+ ++E+L G PF+G +N +V+G+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 604
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 268
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 269 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 312 FSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRED-GHIMLSDF 359
E+ + + +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 70
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 128
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
+ YL +V+RDL NVLV+ H+ ++DF
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME +L + Q +
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
+V T Y APE+I G G+ VD W+ G + E++ G F G+++ V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 268 QSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKF-------- 319
+S DHP + Y TD+F + +E C L+ K S++ +K
Sbjct: 64 ESDDHPNVIRYYCSETTDRFLYIALELCNLN----LQDLVESKNVSDENLKLQKEYNPIS 119
Query: 320 YVAEVLLALEYLHMLGIVYRDLKPENVLVR-------------EDGHIMLSDFDL 361
+ ++ + +LH L I++RDLKP+N+LV E+ I++SDF L
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 69/171 (40%), Gaps = 27/171 (15%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L + + +LL+ +G G G+VY L A+KV S R+ + E+ I +
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPV--AVKVF---SFANRQNFI---NEKNIYRV 61
Query: 270 --LDHPFLPTLYTHFETDKFS-----CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA 322
++H + E LVME+ P G L + S + V
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVT 121
Query: 323 EVLLALEYLHML---------GIVYRDLKPENVLVREDGHIMLSDFDLSLR 364
L YLH I +RDL NVLV+ DG ++SDF LS+R
Sbjct: 122 R---GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 204 RVKDGVLGVGHFRLLKKLGCGDIGSVYLSEL---TGTKCYFAMKVMDKASLEKRKKLLRA 260
+++D ++ F L + LG G+ GSV ++L G+ A+K++ KA + +
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEF 72
Query: 261 QTEREILQSLDHPFLPTLYTHFETDK------FSCLVMEFCPGGDLHT--LRQRQPGKYF 312
E ++ DHP + L + +++ F GDLH L R F
Sbjct: 73 LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF 132
Query: 313 S---EQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + V+F V ++ +EYL ++RDL N ++ ED + ++DF LS
Sbjct: 133 NLPLQTLVRFMV-DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQPLRFPESP 514
++LA E + + D W FG+ ++E++ G+TP+ G EN A +YN + R + P
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-AEIYNYLIGGNRLKQPP 262
Query: 515 VVSFSARDLIKGLLVKEPQNR--LACRRGATE 544
DL+ +P+ R C R E
Sbjct: 263 ECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY--LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
+L F+ +K LG G G+VY L G K + +M+ K E +
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYV 104
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAK 162
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTG---TKCYFAMKVMDKASLEKRKKLLRAQTEREI 266
+ V + ++ + +G G+ G V L + A+K + E++++ +E I
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR--EFLSEASI 68
Query: 267 LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLL 326
+ +HP + L ++ EF G L + + G++ Q V + +
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM-LRGIAS 127
Query: 327 ALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL + V+RDL N+LV + +SDF LS
Sbjct: 128 GMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 436 LPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGS 494
L E ++PT S+ + APE I SA D W++GI ++E++ FG+ P+
Sbjct: 166 LEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 225
Query: 495 ENRATLYNVVGQPLRFPESP 514
N+ + N + Q R P P
Sbjct: 226 SNQDVI-NAIEQDYRLPPPP 244
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME +L + Q +
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVS 368
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+ S
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
+V T Y APE+I G G+ VD W+ G + E++ G F G+++ V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 240
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 241 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 148
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDF 174
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 75
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 133
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
+ YL +V+RDL NVLV+ H+ ++DF
Sbjct: 134 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 253
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 254 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 161
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
L+ E+ D L P ++ +++Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 107 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 160
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
L+ E+ D L P ++ +++Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 106 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
L+ E+ D L P ++ +++Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
L+ E+ D L P ++ +++Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 106 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 241
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 242 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 281
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 149
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
L+ E+ D L ++ +++Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 126 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 179
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K LG G G+VY + E K A+K + +A+ K K E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 68
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 126
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDF 359
+ YL +V+RDL NVLV+ H+ ++DF
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQ 268
V+GVG F G++ S L + A+K + +K+++ +E I+
Sbjct: 15 VIGVGEF--------GEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF--LSEASIMG 64
Query: 269 SLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
DHP + L K ++ E+ G L ++ G++ Q V + + +
Sbjct: 65 QFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM-LRGIGSGM 123
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+YL + V+RDL N+LV + +SDF +S
Sbjct: 124 KYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 157
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE I SA D W++GI ++E++ +G+ P+ N+ + + + R P
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 233
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
L+ E+ D L P ++ +++Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 268
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 269 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 176
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 24/151 (15%)
Query: 260 AQTEREILQSLD-HPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVK 318
A E ++L+ D HP + + + +F + +E C TL++ K F+ ++
Sbjct: 64 ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA----TLQEYVEQKDFAHLGLE 119
Query: 319 --FYVAEVLLALEYLHMLGIVYRDLKPENVLV---REDGHI--MLSDFDLSLRCAVSPTV 371
+ + L +LH L IV+RDLKP N+L+ G I M+SDF L + AV
Sbjct: 120 PITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179
Query: 372 VKSST------------LESEPLRKNPVYCV 390
+ + SE ++NP Y V
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTV 210
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
L+ E+ D L ++ +++Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 260
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 261 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 300
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 168
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDF 194
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
L+ E+ D L P ++ +++Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
L+ E+ D L ++ +++Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 290 LVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
L+ E+ D L ++ +++Y+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVLYPT-----LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 226
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 227 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 134
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 248
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 249 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 288
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 99 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 156
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDF 182
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 226
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 227 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 134
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME ++
Sbjct: 70 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 124
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 125 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
+V T Y APE+I G G+ VD W+ G + E++ G F G+++ V+ Q
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 241
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME ++
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
V T Y APE+I G G+ VD W+ G + E++ G F G+++ V+ Q
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME ++
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
+V T Y APE+I G G+ VD W+ G + E++ G F G+++ V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 267 LQSLDHPFLPTLYTHF--ETDKFSCLVMEFCPGG-DLHTLRQRQPGKYFSEQAVKFYVAE 323
++++D PF T Y E D + C ME D + G+ E +
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWIC--MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVS 117
Query: 324 VLLALEYLH-MLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ ALE+LH L +++RD+KP NVL+ G + + DF +S
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 225
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 226 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 133
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDF 159
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 225
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 226 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 133
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDF 159
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 221
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 222 FFRQR--VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNX 129
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME ++
Sbjct: 74 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 128
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 129 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 226
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 227 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 134
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME ++
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
+V T Y APE+I G G+ VD W+ G + E++ G F G+++ V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME ++
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
R+K L+ E ++ DHP + L T+ ++ME C G+L + Q +
Sbjct: 55 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LD 109
Query: 314 EQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ Y ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 110 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 158
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQ 506
+++APE I SA D W FG+ ++E+L G PF+G +N +V+G+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 224
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME ++
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 123
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 452 VGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 33/51 (64%)
Query: 312 FSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
+V T Y APE+I G G+ VD W+ G + E++ G F G+++ V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICD 169
Query: 359 FDLS 362
F L+
Sbjct: 170 FGLA 173
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 15/128 (11%)
Query: 424 KPKNEMGNQVSPLP------ELIAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVD 473
KP N + N S L +A+P + + +V T Y APEI + +G+ ++D
Sbjct: 153 KPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 474 WWTFGIFLYELLFGKTPFKGSENRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVK 530
W+ G L E+L + F G L + ++G P + + ++ AR+ + L K
Sbjct: 213 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHK 272
Query: 531 E--PQNRL 536
P NRL
Sbjct: 273 NKVPWNRL 280
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 224
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 225 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 264
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 132
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDF 158
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 259 RAQTEREILQSLDHPFLPTLYTHF------ETDKFSCLVMEFCPGGDLHTLRQRQPGKYF 312
RA E +++ ++H + L F E + +VME ++
Sbjct: 63 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 117
Query: 313 SEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + + + ++L +++LH GI++RDLKP N++V+ D + + DF L+
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 451 FVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
+V T Y APE+I G G+ VD W+ G + E++ K F G + V+ Q
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 450 SFVGTHEYLAPEIIK-GEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPL 508
F GT Y PE I+ HG + W+ GI LY+++ G PF+ E ++ +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 221
Query: 509 RFPESPVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGV 554
F + VS + LI+ L P +R EI+ HP+ Q V
Sbjct: 222 FFRQR--VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%)
Query: 221 LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKL---LRAQTEREILQSLDHPF--L 275
LG G GSVY A+K ++K + +L R E +L+ + F +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 276 PTLYTHFET-DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
L FE D F ++ P DL + E+ + + +VL A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHCHNC 129
Query: 335 GIVYRDLKPENVLVRED-GHIMLSDF 359
G+++RD+K EN+L+ + G + L DF
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPT 277
LK LGCG G V+ + A+K K L + + A E +I++ LDH +
Sbjct: 16 LKPLGCGGNGLVFSAVDNDCDKRVAIK---KIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 278 LYTHFE-------------TDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ T+ S +++ DL + ++ P E+ + ++ ++
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP---LLEEHARLFMYQL 129
Query: 325 LLALEYLHMLGIVYRDLKPENVLVR-EDGHIMLSDFDLS 362
L L+Y+H +++RDLKP N+ + ED + + DF L+
Sbjct: 130 LRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 33/127 (25%)
Query: 454 THEYLAPEIIKG-EGHGSAVDWWTFGIFLYELLFGKTPFKGS------------------ 494
T Y +P ++ + A+D W G E+L GKT F G+
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE 246
Query: 495 ENRATLYNVVGQPLRF----PESPV------VSFSARDLIKGLLVKEPQNRLACRRGATE 544
E+R L +V+ +R P P+ +S A D ++ +L P +RL A E
Sbjct: 247 EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT----AEE 302
Query: 545 IKQHPFF 551
HP+
Sbjct: 303 ALSHPYM 309
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K L G G+VY + E K A+K + +A+ K K E
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 68
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 126
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 254 RKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
R+K L+ E ++ DHP + L T+ ++ME C G+L + Q +
Sbjct: 435 REKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LD 489
Query: 314 EQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVK 373
++ Y ++ AL YL V+RD+ NVLV + L DF LS R T K
Sbjct: 490 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS-RYMEDSTYYK 548
Query: 374 SS 375
+S
Sbjct: 549 AS 550
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELLF-GKTPFKGSENRATLYNVVGQ 506
+++APE I SA D W FG+ ++E+L G PF+G +N +V+G+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 604
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVY----LSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
+L F+ +K L G G+VY + E K A+K + +A+ K K E
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEA 75
Query: 265 EILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
++ S+D+P + L T L+ + P G L R+ Q + + ++
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQI 133
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 134 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 212 VGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI--LQS 269
+ +R + KLG G G VY + T T A+K + LE ++ + RE+ L+
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIK---RIRLEHEEEGVPGTAIREVSLLKE 89
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
L H + L + + L+ E+ DL + P S + +K ++ +++ +
Sbjct: 90 LQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPD--VSMRVIKSFLYQLINGVN 146
Query: 330 YLHMLGIVYRDLKPENVLV 348
+ H ++RDLKP+N+L+
Sbjct: 147 FCHSRRCLHRDLKPQNLLL 165
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 23 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 76
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 77 RLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 136 RNYIHRDLRAANILVSDTLSCKIADFGLA 164
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 74
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 75 RLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 212 VGHFRLLKK---LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRA--QTEREI 266
V H R LKK LG G G V L T V KA E LR+ Q E EI
Sbjct: 4 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEI 63
Query: 267 LQSLDHPFLPTLYTHFET--DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
L++L H + E +K LVME+ P G +LR P + + ++
Sbjct: 64 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLLLFAQQI 120
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YLH ++R L NVL+ D + + DF L+
Sbjct: 121 CEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 158
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 485
+ APE +K A D W+FG+ LYELL
Sbjct: 180 WYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 24 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 77
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 78 RLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLA 165
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 212 VGHFRLLKK---LGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRA--QTEREI 266
V H R LKK LG G G V L T V KA E LR+ Q E EI
Sbjct: 5 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEI 64
Query: 267 LQSLDHPFLPTLYTHFET--DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEV 324
L++L H + E +K LVME+ P G +LR P + + ++
Sbjct: 65 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLLLFAQQI 121
Query: 325 LLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ YLH ++R L NVL+ D + + DF L+
Sbjct: 122 CEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 159
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 485
+ APE +K A D W+FG+ LYELL
Sbjct: 181 WYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 78
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 79 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 138 RNYIHRDLRAANILVSDTLSCKIADFGLA 166
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 359 FDLS 362
F L+
Sbjct: 170 FGLA 173
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 235 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 280
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 359 FDLS 362
F L+
Sbjct: 172 FGLA 175
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 131 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 187
Query: 359 FDLS 362
F L+
Sbjct: 188 FGLA 191
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 253 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 298
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 359 FDLS 362
F L+
Sbjct: 168 FGLA 171
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 233 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 131 DLYKLLKSQQ---LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICD 187
Query: 359 FDLS 362
F L+
Sbjct: 188 FGLA 191
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGS- 494
IA+P + + V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 193 IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 495 --ENRATLYNVVGQPLRFPESPVVSFSARDLIKGL 527
+ + ++G P + + +++ AR+ ++ L
Sbjct: 253 YLDQLNHILGILGSPSQEDLNCIINMKARNYLQSL 287
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 68
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 69 RLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 359 FDLS 362
F L+
Sbjct: 170 FGLA 173
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 235 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 280
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 116 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 359 FDLS 362
F L+
Sbjct: 173 FGLA 176
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 178 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 238 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 283
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 117 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 173
Query: 359 FDLS 362
F L+
Sbjct: 174 FGLA 177
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 179 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 239 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 284
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 108 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 164
Query: 359 FDLS 362
F L+
Sbjct: 165 FGLA 168
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 170 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 230 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 275
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 359 FDLS 362
F L+
Sbjct: 172 FGLA 175
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 359 FDLS 362
F L+
Sbjct: 168 FGLA 171
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 233 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 359 FDLS 362
F L+
Sbjct: 172 FGLA 175
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 452 VGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYN---VVGQP 507
V T Y APEI + +G+ ++D W+ G L E+L + F G L + ++G P
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 508 LRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
+ + +++ AR+ + L K P NRL
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 116 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 359 FDLS 362
F L+
Sbjct: 173 FGLA 176
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 452 VGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYN---VVGQP 507
V T Y APEI + +G+ ++D W+ G L E+L + F G L + ++G P
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
Query: 508 LRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
+ + +++ AR+ + L K P NRL
Sbjct: 253 SQEDLNCIINLKARNYLLSLPHKNKVPWNRL 283
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 359 FDLS 362
F L+
Sbjct: 172 FGLA 175
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 79/206 (38%), Gaps = 30/206 (14%)
Query: 200 IQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSEL-----TGTKCYFAMKVMDKASLEKR 254
+Q ++ +D VL ++LG G G V+L+E T K A+K + +L R
Sbjct: 9 VQHIKRRDIVLK-------RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR 61
Query: 255 KKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ--------- 305
K Q E E+L +L H + Y +V E+ GDL+ +
Sbjct: 62 KDF---QREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMIL 118
Query: 306 -----RQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFD 360
RQ + +++ + YL V+RDL N LV + + + DF
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG 178
Query: 361 LSLRCAVSPTVVKSSTLESEPLRKNP 386
+S R S + P+R P
Sbjct: 179 MS-RDVYSTDYYRVGGHTMLPIRWMP 203
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 452 VGTH-----EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVV- 504
VG H ++ PE I + D W+FG+ L+E+ +GK P+ N + +
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 250
Query: 505 GQPLRFPESPVVSFSARDLIKGLLVKEPQNRL 536
G+ L P V D++ G +EPQ RL
Sbjct: 251 GRVLERPR--VCPKEVYDVMLGCWQREPQQRL 280
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXD 167
Query: 359 FDLS 362
F L+
Sbjct: 168 FGLA 171
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 233 YLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 109 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 359 FDLS 362
F L+
Sbjct: 166 FGLA 169
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 231 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 276
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 359 FDLS 362
F L+
Sbjct: 172 FGLA 175
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 119 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 175
Query: 359 FDLS 362
F L+
Sbjct: 176 FGLA 179
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 181 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 241 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 286
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 359 FDLS 362
F L+
Sbjct: 168 FGLA 171
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 233 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 359 FDLS 362
F L+
Sbjct: 168 FGLA 171
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 233 YLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 7/169 (4%)
Query: 219 KKLGCGDIGSVY---LSELTGTK-CYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
K +G G+ G VY L +G K A+K + EK++ + E I+ H
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR--VDFLGEAGIMGQFSHHN 107
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHML 334
+ L K ++ E+ G L + + G++ Q V + + ++YL +
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGM-LRGIAAGMKYLANM 166
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSSTLESEPLR 383
V+RDL N+LV + +SDF LS P +++ P+R
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 215
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFP 511
+ APE I SA D W+FGI ++E++ +G+ P+ N + + R P
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM-KAINDGFRLP 270
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 109 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 359 FDLS 362
F L+
Sbjct: 166 FGLA 169
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 231 YLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRL 276
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 70
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 71 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 130 RNYIHRDLRAANILVSDTLSCKIADFGLA 158
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 68
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 69 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 74
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 75 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 73
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 74 RLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 133 RNYIHRDLRAANILVSDTLSCKIADFGLA 161
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 212 VGHFRLLKK---LGCGDIG--SVYLSELT--GTKCYFAMKVMDKASLEKRKKLLRAQTER 264
V H R LKK LG G G S+Y + T GT A+K + + + + + E
Sbjct: 27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRS--GWKQEI 84
Query: 265 EILQSLDHPFLPTLYTHFETDKFSC---------LVMEFCPGGDLHTLRQRQPGKYFSEQ 315
+IL++L H H K C LVME+ P G +LR P
Sbjct: 85 DILRTLYH-------EHIIKYKGCCEDAGAASLQLVMEYVPLG---SLRDYLPRHSIGLA 134
Query: 316 AVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + ++ + YLH ++RDL NVL+ D + + DF L+
Sbjct: 135 QLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 485
+ APE +K A D W+FG+ LYELL
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSL---- 270
+ +LK +G G G V + + A+K++ R+ A E IL+ L
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ----AAEEIRILEHLRKQD 154
Query: 271 -DHPF-LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
D+ + + +F C+ E +L+ L ++ + FS V+ + +L L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
+ LH I++ DLKPEN+L+++ G + D C
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG---SENRATLY 501
+ R + + + Y APE+I G +G +D W+ G L ELL G G + A +
Sbjct: 253 HQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312
Query: 502 NVVGQP 507
++G P
Sbjct: 313 ELLGMP 318
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 69
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 70 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 129 RNYIHRDLRAANILVSDTLSCKIADFGLA 157
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 68
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 69 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 68
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 69 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 299 DLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSD 358
DL+ L + Q + S + +++ ++L L+Y+H +++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKCQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 359 FDLS 362
F L+
Sbjct: 172 FGLA 175
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 440 IAEPTNARS---MSFVGTHEYLAPEI-IKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSE 495
+A+P + + +V T Y APEI + +G+ ++D W+ G L E+L + F G
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 496 NRATLYN---VVGQPLRFPESPVVSFSARDLIKGLLVKE--PQNRL 536
L + ++G P + + +++ AR+ + L K P NRL
Sbjct: 237 YLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Query: 220 KLGCGDIGSVYLSELTGTKCY--FAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPT 277
K+G G G VY ++ K +A+K ++ + + A E +L+ L HP + +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----MSACREIALLRELKHPNVIS 82
Query: 278 LYTHF--ETDKFSCLVMEFCPGGDLHTLRQRQPGK------YFSEQAVKFYVAEVLLALE 329
L F D+ L+ ++ H ++ + K VK + ++L +
Sbjct: 83 LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 330 YLHMLGIVYRDLKPENVLVREDG 352
YLH +++RDLKP N+LV +G
Sbjct: 143 YLHANWVLHRDLKPANILVMGEG 165
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSL---- 270
+ +LK +G G G V + + A+K++ R+ A E IL+ L
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ----AAEEIRILEHLRKQD 154
Query: 271 -DHPF-LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
D+ + + +F C+ E +L+ L ++ + FS V+ + +L L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
+ LH I++ DLKPEN+L+++ G + D C
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG---SENRATLY 501
+ R + + Y APE+I G +G +D W+ G L ELL G G + A +
Sbjct: 253 HQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312
Query: 502 NVVGQP 507
++G P
Sbjct: 313 ELLGMP 318
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 63
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 64 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV + ++DF L+
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLA 151
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 215 FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSL---- 270
+ +LK +G G G V + + A+K++ R+ A E IL+ L
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ----AAEEIRILEHLRKQD 154
Query: 271 -DHPF-LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLAL 328
D+ + + +F C+ E +L+ L ++ + FS V+ + +L L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 329 EYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRC 365
+ LH I++ DLKPEN+L+++ G + D C
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 445 NARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKG---SENRATLY 501
+ R + + + Y APE+I G +G +D W+ G L ELL G G + A +
Sbjct: 253 HQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312
Query: 502 NVVGQP 507
++G P
Sbjct: 313 ELLGMP 318
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLP 276
LLK+LG G G V L + G + A+K++ + S+ + + AQT + L HP L
Sbjct: 12 LLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSMSEDEFFQEAQT----MMKLSHPKLV 66
Query: 277 TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGI 336
Y + +V E+ G L R GK + +V + +L
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQF 125
Query: 337 VYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL N LV D + +SDF ++
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMT 151
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 445 NARSMSFVGTH---EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATL 500
+ + +S VGT ++ APE+ + S D W FGI ++E+ GK P+ N +
Sbjct: 156 DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV 215
Query: 501 YNV 503
V
Sbjct: 216 LKV 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 292 MEFCPGGDLHTLRQRQPGKYFSEQAVKFYV-AEVLLALEYLHMLGIVYRDLKPENVLVRE 350
M+ C +L R+ E V ++ ++ A+E+LH G+++RDLKP N+
Sbjct: 140 MQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM 199
Query: 351 DGHIMLSDFDL 361
D + + DF L
Sbjct: 200 DDVVKVGDFGL 210
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 443 PTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYN 502
P A VGT Y++PE I G + VD ++ G+ L+ELL+ F R +
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQMERVRIIT 284
Query: 503 VVGQPLRFP 511
V + L+FP
Sbjct: 285 DV-RNLKFP 292
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 28/195 (14%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCY--FAMKVMDKASLEKRKKLLRAQTERE--ILQSLDHP 273
++ +G G G V+ + G Y F M V K E+ ++A +RE ++ D+P
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTM-VAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDL---------HTL------------RQRQPGKYF 312
+ L K CL+ E+ GDL HT+ R PG
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 313 SEQAVKFYVA-EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTV 371
A + +A +V + YL V+RDL N LV E+ + ++DF LS R S
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS-RNIYSADY 229
Query: 372 VKSSTLESEPLRKNP 386
K+ ++ P+R P
Sbjct: 230 YKADGNDAIPIRWMP 244
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVV-GQPLRFPESP 514
++ PE I + + D W +G+ L+E+ +G P+ G + +Y V G L PE+
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN- 300
Query: 515 VVSFSARDLIKGLLVKEPQNR 535
+L++ K P +R
Sbjct: 301 -CPLELYNLMRLCWSKLPADR 320
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 23/162 (14%)
Query: 220 KLGCGDIGSVYLSELTGT-----KCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+LG G G V+L+E K A+K + +AS R+ Q E E+L L H
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDF---QREAELLTMLQHQH 104
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQ--------------PGKYFSEQAVKFY 320
+ + + +V E+ GDL+ + PG Q +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV- 163
Query: 321 VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++V + YL L V+RDL N LV + + + DF +S
Sbjct: 164 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 205
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVV-GQPLRFPESP 514
++ PE I + D W+FG+ L+E+ +GK P+ N + + G+ L P +
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 285
Query: 515 VVSFSARDLIKGLLVKEPQNR 535
A +++G +EPQ R
Sbjct: 286 PPEVYA--IMRGCWQREPQQR 304
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L KKLG G G V+++ TK A+K M S+ L E ++++L H
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNKHTKV--AVKTMKPGSMSVEAFL----AEANVMKTLQHD 70
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L L+ T + ++ EF G L + G + + A++ + ++
Sbjct: 71 KLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV ++DF L+
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLA 158
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSEN 496
++ APE I D W+FGI L E++ +G+ P+ G N
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 218
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 250 SLEKRKKLLRAQTEREILQSLDH-------PFLPTLYTHF--ETDKFSCLVMEFCPGGDL 300
++++ + + +Q ++ +L LD PF T Y E D + C +
Sbjct: 63 AVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKF 122
Query: 301 HTLRQRQPGKYFSEQAVKFYVAEVLLALEYLH-MLGIVYRDLKPENVLVREDGHIMLSDF 359
+ + G+ E + ++ ALE+LH L +++RD+KP NVL+ G + DF
Sbjct: 123 YK-QVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDF 181
Query: 360 DLS 362
+S
Sbjct: 182 GIS 184
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 19/179 (10%)
Query: 215 FRLLKKLGCGDIGSV----YLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREI-LQS 269
R LK LG G G+V ++ E K +KV++ S ++ +A T+ + + S
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS---GRQSFQAVTDHMLAIGS 89
Query: 270 LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALE 329
LDH + L LV ++ P G L RQ Q + + ++ +
Sbjct: 90 LDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLD-HVRQHRGALGPQLLLNWGVQIAKGMY 147
Query: 330 YLHMLGIVYRDLKPENVLVREDGHIMLSDF---------DLSLRCAVSPTVVKSSTLES 379
YL G+V+R+L NVL++ + ++DF D L + + T +K LES
Sbjct: 148 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L KKLG G G V+++ TK A+K M S+ L E ++++L H
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKHTKV--AVKTMKPGSMSVEAFL----AEANVMKTLQHD 243
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L L+ T + ++ EF G L + G + + A++ + ++
Sbjct: 244 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV ++DF L+
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLA 331
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSEN 496
++ APE I D W+FGI L E++ +G+ P+ G N
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 391
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L+++LG G G V++ G TK A+K + + S+ L E +++ L H
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNGHTKV--AVKSLKQGSMSPDAFL----AEANLMKQLQHQ 64
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L LY T + ++ E+ G L + G + + A++ + ++
Sbjct: 65 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++R+L+ N+LV + ++DF L+
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLA 152
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNV 503
++ APE I D W+FGI L E++ G+ P+ G N + N+
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 215 FRLLKKLGCGDIGSVYLSELTG-TKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHP 273
+L KKLG G G V+++ TK A+K M S+ L E ++++L H
Sbjct: 184 LKLEKKLGAGQFGEVWMATYNKHTKV--AVKTMKPGSMSVEAFL----AEANVMKTLQHD 237
Query: 274 FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHM 333
L L+ T + ++ EF G L + G + + A++ + ++
Sbjct: 238 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 334 LGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++RDL+ N+LV ++DF L+
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFGLA 325
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSEN 496
++ APE I D W+FGI L E++ +G+ P+ G N
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 375
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 21/172 (12%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVYLSEL--TGTKCYFAMKVM-DKASLEKRKKLLRAQTERE 265
VL + +G G+ G V + + G + A+K M + AS + + E E
Sbjct: 11 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF---AGELE 67
Query: 266 ILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQ--------------PGK 310
+L L HP + L E + L +E+ P G+L ++
Sbjct: 68 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 127
Query: 311 YFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
S Q + + A+V ++YL ++RDL N+LV E+ ++DF LS
Sbjct: 128 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 32/177 (18%)
Query: 202 AVRVKDGVLGVGHFRLLKKLGCGDIGSV----YLSELTGTKCYFAMKVMDKASLEKRKKL 257
A++V + R LK LG G G+V ++ E K +KV++ S ++
Sbjct: 2 AMKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS---GRQS 58
Query: 258 LRAQTEREI-LQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ----------- 305
+A T+ + + SLDH + L + CPG L + Q
Sbjct: 59 FQAVTDHMLAIGSLDHAHIVRL-------------LGLCPGSSLQLVTQYLPLGSLLDHV 105
Query: 306 RQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
RQ Q + + ++ + YL G+V+R+L NVL++ + ++DF ++
Sbjct: 106 RQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 21/172 (12%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVYLSEL--TGTKCYFAMKVM-DKASLEKRKKLLRAQTERE 265
VL + +G G+ G V + + G + A+K M + AS + + E E
Sbjct: 21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF---AGELE 77
Query: 266 ILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQ--------------PGK 310
+L L HP + L E + L +E+ P G+L ++
Sbjct: 78 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 137
Query: 311 YFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
S Q + + A+V ++YL ++RDL N+LV E+ ++DF LS
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 212 VGHFRLLKK---LGCGDIG--SVYLSELT--GTKCYFAMKVMDKASLEKRKKLLRAQTER 264
V H R LKK LG G G S+Y + T GT A+K + KA + + Q E
Sbjct: 10 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQHRSGWKQ-EI 67
Query: 265 EILQSLDHPFLPTLYTHFET--DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA 322
+IL++L H + E +K LVME+ P G +LR P + +
Sbjct: 68 DILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQ 124
Query: 323 EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ + YLH ++R+L NVL+ D + + DF L+
Sbjct: 125 QICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 485
+ APE +K A D W+FG+ LYELL
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 23/162 (14%)
Query: 220 KLGCGDIGSVYLSELTGT-----KCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+LG G G V+L+E K A+K + +AS R+ Q E E+L L H
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDF---QREAELLTMLQHQH 75
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQ--------------PGKYFSEQAVKFY 320
+ + + +V E+ GDL+ + PG Q +
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV- 134
Query: 321 VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++V + YL L V+RDL N LV + + + DF +S
Sbjct: 135 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 176
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVV-GQPLRFPESP 514
++ PE I + D W+FG+ L+E+ +GK P+ N + + G+ L P +
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 256
Query: 515 VVSFSARDLIKGLLVKEPQNR 535
A +++G +EPQ R
Sbjct: 257 PPEVYA--IMRGCWQREPQQR 275
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 219 KKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQSL- 270
K LG G G V L+E G A+K++ + EK L +E E+++ +
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK--DLSDLISEMEMMKMIG 91
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ--RQPGKYFS---------EQAVKF 319
H + L D +++E+ G+L Q R PG FS + + K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 320 YVA---EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+ +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 23/162 (14%)
Query: 220 KLGCGDIGSVYLSELTGT-----KCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPF 274
+LG G G V+L+E K A+K + +AS R+ Q E E+L L H
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDF---QREAELLTMLQHQH 81
Query: 275 LPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQ--------------PGKYFSEQAVKFY 320
+ + + +V E+ GDL+ + PG Q +
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV- 140
Query: 321 VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++V + YL L V+RDL N LV + + + DF +S
Sbjct: 141 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 182
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVV-GQPLRFPESP 514
++ PE I + D W+FG+ L+E+ +GK P+ N + + G+ L P +
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 262
Query: 515 VVSFSARDLIKGLLVKEPQNR 535
A +++G +EPQ R
Sbjct: 263 PPEVYA--IMRGCWQREPQQR 281
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 212 VGHFRLLKK---LGCGDIG--SVYLSELT--GTKCYFAMKVMDKASLEKRKKLLRAQTER 264
V H R LKK LG G G S+Y + T GT A+K + KA + + Q E
Sbjct: 10 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQHRSGWKQ-EI 67
Query: 265 EILQSLDHPFLPTLYTHFET--DKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVA 322
+IL++L H + E +K LVME+ P G +LR P + +
Sbjct: 68 DILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQ 124
Query: 323 EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ + YLH ++R+L NVL+ D + + DF L+
Sbjct: 125 QICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL 485
+ APE +K A D W+FG+ LYELL
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V ++E G A+K++ + EK L +E E+++
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK--DLSDLVSEMEMMKM 96
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQP-GKYFS-------EQAVKF 319
+ H + TL D +++E+ G+L LR R+P G +S E+ + F
Sbjct: 97 IGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 320 Y-----VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ +EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
+ V T Y APE+I G D W+ G ++E G T F+ +NR L
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHL 262
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 210 LGVGH-FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQ 268
L VG+ +RL +K+G G G +YL GT +V K K K + E +I +
Sbjct: 5 LRVGNRYRLGRKIGSGSFGDIYL----GTDIAAGEEVAIKLECVKTKHP-QLHIESKIYK 59
Query: 269 SLDHPF-LPTLYTHFETDKFSCLVMEFCPGG--DLHTLRQRQPGKYFSEQAVKFYVAEVL 325
+ +PT+ ++ +VME DL R+ FS + V +++
Sbjct: 60 MMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMI 115
Query: 326 LALEYLHMLGIVYRDLKPENVLV---REDGHIMLSDFDLS 362
+EY+H ++RD+KP+N L+ ++ + + DF L+
Sbjct: 116 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 89/237 (37%), Gaps = 28/237 (11%)
Query: 210 LGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
LG R+ + L G VY ++ G+ +A+K + EK + +++ E ++
Sbjct: 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQ---EVCFMKK 81
Query: 270 LD-HPFLPTLYTHFETDKFS--------CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFY 320
L HP + + K L+ E C G + L++ + S V
Sbjct: 82 LSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKI 141
Query: 321 VAEVLLALEYLHMLG--IVYRDLKPENVLVREDGHIMLSDF----------DLSLRCAVS 368
+ A++++H I++RDLK EN+L+ G I L DF D S
Sbjct: 142 FYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRR 201
Query: 369 PTVVKSSTLESEPLRKNP----VYCVQPACIEPSCIQPSCIAPTTCFSPRFFSKSKK 421
V + T + P+ + P +Y P + CI CF F K
Sbjct: 202 ALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 457 YLAPEIIKGEGH---GSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLRFPES 513
Y PEII + G D W G LY L F + PF E+ A L +V P
Sbjct: 216 YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF---EDGAKL-RIVNGKYSIPPH 271
Query: 514 PVVSFSARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQGVN 555
LI+ +L P+ RL+ ++++ + VN
Sbjct: 272 DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 4/148 (2%)
Query: 218 LKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQSLDHPFLPT 277
L ++G G GSV + A+K + EK +K L + +++S D P++
Sbjct: 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV-VMRSSDCPYIVQ 85
Query: 278 LYTHF--ETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYL-HML 334
Y E D + C+ + + E+ + + AL +L L
Sbjct: 86 FYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL 145
Query: 335 GIVYRDLKPENVLVREDGHIMLSDFDLS 362
I++RD+KP N+L+ G+I L DF +S
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGIS 173
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 453 GTHEYLAPEIIK----GEGHGSAVDWWTFGIFLYELLFGKTPF-KGSENRATLYNVV-GQ 506
G Y+APE I +G+ D W+ GI LYEL G+ P+ K + L VV G
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGD 246
Query: 507 PLRFPESPVVSFSAR--DLIKGLLVKEPQNRLACRRGATEIKQHPFF 551
P + S FS + + L K+ R + E+ +HPF
Sbjct: 247 PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYK----ELLKHPFI 289
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V L+E G A+K++ + EK L +E E+++
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK--DLSDLISEMEMMKM 81
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ--RQPGKYFS---------EQAV 317
+ H + L D +++E+ G+L Q R PG +S + +
Sbjct: 82 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 318 KFYVA---EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
K V+ +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 142 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 210 LGVGH-FRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTEREILQ 268
L VG+ +RL +K+G G G +YL GT +V K K K + E +I +
Sbjct: 3 LRVGNRYRLGRKIGSGSFGDIYL----GTDIAAGEEVAIKLECVKTKHP-QLHIESKIYK 57
Query: 269 SLDHPF-LPTLYTHFETDKFSCLVMEFCPGG--DLHTLRQRQPGKYFSEQAVKFYVAEVL 325
+ +PT+ ++ +VME DL R+ FS + V +++
Sbjct: 58 MMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMI 113
Query: 326 LALEYLHMLGIVYRDLKPENVLV---REDGHIMLSDFDLS 362
+EY+H ++RD+KP+N L+ ++ + + DF L+
Sbjct: 114 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
+ V T Y PE+I G D W+ G L+E G T F+ ENR L
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
+ V T Y PE+I G D W+ G L+E G T F+ ENR L
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V L+E G A+K++ + EK L +E E+++
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK--DLSDLISEMEMMKM 78
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ--RQPGKYFS---------EQAV 317
+ H + L D +++E+ G+L Q R PG +S + +
Sbjct: 79 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 318 KFYVA---EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
K V+ +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 139 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 21/172 (12%)
Query: 209 VLGVGHFRLLKKLGCGDIGSVYLSEL--TGTKCYFAMKVM-DKASLEKRKKLLRAQTERE 265
VL + +G G+ G V + + G + A+K M + AS + + E E
Sbjct: 18 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF---AGELE 74
Query: 266 ILQSL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQ--------------PGK 310
+L L HP + L E + L +E+ P G+L ++
Sbjct: 75 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 134
Query: 311 YFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
S Q + + A+V ++YL ++R+L N+LV E+ ++DF LS
Sbjct: 135 TLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS 186
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATL 500
+ V T Y PE+I G D W+ G L+E G T F+ ENR L
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V L+E G A+K++ + EK L +E E+++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK--DLSDLISEMEMMKM 89
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ--RQPGKYFS---------EQAV 317
+ H + L D +++E+ G+L Q R PG +S + +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 318 KFYVA---EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
K V+ +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 219 KKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQSL- 270
K LG G G V L+E G A+K++ + EK L +E E+++ +
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK--DLSDLISEMEMMKMIG 84
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ--RQPGKYFS---------EQAVKF 319
H + L D +++E+ G+L Q R PG +S + + K
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 320 YVA---EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
V+ +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V L+E G A+K++ + EK L +E E+++
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK--DLSDLISEMEMMKM 130
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ--RQPGKYFS---------EQAV 317
+ H + L D +++E+ G+L Q R PG +S + +
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 318 KFYVA---EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
K V+ +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 217 LLKKLGCGDIGSVYLSE----LTG-TKCYFAMKVMDK-ASLEKRKKLLRAQTEREILQSL 270
LL++LG G G VY + G + A+K +++ ASL +R + L E +++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 77
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HTLR---QRQPGKYF-SEQAVKFYVA 322
+ L + + +VME GDL +LR + PG+ + Q + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 323 EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
E+ + YL+ V+RDL N +V D + + DF ++
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVV 504
++APE +K ++ D W+FG+ L+E+ + P++G N L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 217 LLKKLGCGDIGSVYLSE----LTG-TKCYFAMKVMDK-ASLEKRKKLLRAQTEREILQSL 270
LL++LG G G VY + G + A+K +++ ASL +R + L E +++
Sbjct: 18 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 74
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HTLR---QRQPGKYF-SEQAVKFYVA 322
+ L + + +VME GDL +LR + PG+ + Q + A
Sbjct: 75 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 323 EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
E+ + YL+ V+RDL N +V D + + DF ++
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 174
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVV 504
++APE +K ++ D W+FG+ L+E+ + P++G N L V+
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 243
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 217 LLKKLGCGDIGSVYLSE----LTG-TKCYFAMKVMDK-ASLEKRKKLLRAQTEREILQSL 270
LL++LG G G VY + G + A+K +++ ASL +R + L E +++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 77
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HTLR---QRQPGKYF-SEQAVKFYVA 322
+ L + + +VME GDL +LR + PG+ + Q + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 323 EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
E+ + YL+ V+RDL N +V D + + DF ++
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVV 504
++APE +K ++ D W+FG+ L+E+ + P++G N L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 289 CLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLV 348
++ C G L+++ R + E++ + YLH GI+++DLK +NV
Sbjct: 105 AIITSLCKGRTLYSV-VRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY 163
Query: 349 REDGHIMLSDFDL 361
++G ++++DF L
Sbjct: 164 -DNGKVVITDFGL 175
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFPESP 514
+++APE I + D W++GIFL+EL G +P+ G + Y ++ + R
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 515 VVSFSARDLIKGLLVKEPQNR 535
D++K +P R
Sbjct: 288 HAPAEMYDIMKTCWDADPLKR 308
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFPESP 514
+++APE I + D W++GIFL+EL G +P+ G + Y ++ + R
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Query: 515 VVSFSARDLIKGLLVKEPQNR 535
D++K +P R
Sbjct: 272 HAPAEMYDIMKTCWDADPLKR 292
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 217 LLKKLGCGDIGSVYLSE----LTG-TKCYFAMKVMDK-ASLEKRKKLLRAQTEREILQSL 270
LL++LG G G VY + G + A+K +++ ASL +R + L E +++
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 76
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HTLR---QRQPGKYF-SEQAVKFYVA 322
+ L + + +VME GDL +LR + PG+ + Q + A
Sbjct: 77 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 323 EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
E+ + YL+ V+RDL N +V D + + DF ++
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 176
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVV 504
++APE +K ++ D W+FG+ L+E+ + P++G N L V+
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 245
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFPESP 514
+++APE I + D W++GIFL+EL G +P+ G + Y ++ + R
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 515 VVSFSARDLIKGLLVKEPQNR 535
D++K +P R
Sbjct: 295 HAPAEMYDIMKTCWDADPLKR 315
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFPESP 514
+++APE I + D W++GIFL+EL G +P+ G + Y ++ + R
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 515 VVSFSARDLIKGLLVKEPQNR 535
D++K +P R
Sbjct: 295 HAPAEMYDIMKTCWDADPLKR 315
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVVGQPLRFPESP 514
+++APE I + D W++GIFL+EL G +P+ G + Y ++ + R
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Query: 515 VVSFSARDLIKGLLVKEPQNR 535
D++K +P R
Sbjct: 290 HAPAEMYDIMKTCWDADPLKR 310
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 219 KKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQSL- 270
K LG G G V L+E G A+K++ + EK L +E E+++ +
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK--DLSDLISEMEMMKMIG 76
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ--RQPG------------KYFSEQA 316
H + L D +++E+ G+L Q R PG + S +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 317 VKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V L+E G A+K++ + EK L +E E+++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK--DLSDLISEMEMMKM 89
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ--------------RQPGKYFSE 314
+ H + L D +++E+ G+L Q P + S
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 315 QAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
VK+G + + + +G G G V + + + A+K++ K+ L +AQ E
Sbjct: 27 VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK----NKKAFLNQAQIEV 82
Query: 265 EILQSLDHP------FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVK 318
+L+ ++ ++ L HF CLV E +L+ L + + S +
Sbjct: 83 RLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTR 141
Query: 319 FYVAEVLLALEYLHM--LGIVYRDLKPENVLV 348
+ ++ AL +L L I++ DLKPEN+L+
Sbjct: 142 KFAQQMCTALLFLATPELSIIHCDLKPENILL 173
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R + + Y +PE++ G + A+D W+ G L E+ G+ F G+ N N + +
Sbjct: 195 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIVE 253
Query: 507 PLRFPESPVVS 517
L P + ++
Sbjct: 254 VLGIPPAHILD 264
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V ++E G A+K++ + EK L +E E+++
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK--DLSDLVSEMEMMKM 96
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQP-GKYFS-------EQAVKF 319
+ H + L D +++E+ G+L LR R+P G +S E+ + F
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 320 Y-----VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ +EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V ++E G A+K++ + EK L +E E+++
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK--DLSDLVSEMEMMKM 96
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQP-GKYFS-------EQAVKF 319
+ H + L D +++E+ G+L LR R+P G +S E+ + F
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 320 Y-----VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ +EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 24/166 (14%)
Query: 219 KKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQSL- 270
K LG G G V ++E G A+K++ + EK L +E E+++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK--DLSDLVSEMEMMKMIG 98
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQP-GKYFS-------EQAVKFY- 320
H + L D +++E+ G+L LR R+P G +S E+ + F
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 321 ----VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ +EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 217 LLKKLGCGDIGSVYLSE----LTG-TKCYFAMKVMDK-ASLEKRKKLLRAQTEREILQSL 270
LL++LG G G VY + G + A+K +++ ASL +R + L E +++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 77
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HTLR---QRQPGKYF-SEQAVKFYVA 322
+ L + + +VME GDL +LR + PG+ + Q + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 323 EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
E+ + YL+ V+RDL N +V D + + DF ++
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVV 504
++APE +K ++ D W+FG+ L+E+ + P++G N L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 217 LLKKLGCGDIGSVYLSE----LTG-TKCYFAMKVMDK-ASLEKRKKLLRAQTEREILQSL 270
LL++LG G G VY + G + A+K +++ ASL +R + L E +++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 77
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDL----HTLR---QRQPGKYF-SEQAVKFYVA 322
+ L + + +VME GDL +LR + PG+ + Q + A
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 323 EVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
E+ + YL+ V+RDL N +V D + + DF ++
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 457 YLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKGSENRATLYNVV 504
++APE +K ++ D W+FG+ L+E+ + P++G N L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V ++E G A+K++ + EK L +E E+++
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK--DLSDLVSEMEMMKM 142
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQP-GKYFS-------EQAVKF 319
+ H + L D +++E+ G+L LR R+P G +S E+ + F
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 320 Y-----VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ +EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 203 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 250
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 26/169 (15%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVM-DKASLEKRKKLLRAQTEREILQ 268
L K LG G G V ++E G A+K++ D A+ E L+ +E E+++
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLV---SEMEMMK 95
Query: 269 SL-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQP-GKYFS-------EQAVK 318
+ H + L D +++E+ G+L LR R+P G +S E+ +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 319 FY-----VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
F ++ +EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 217 LLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEK--------------RKKLLRAQT 262
L KK+G G G +YL+ T A V+ E +K ++
Sbjct: 41 LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWI 100
Query: 263 EREILQSLDHP-FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYV 321
ER+ L L P F + T F+ + +VME G DL + Q G + ++ +
Sbjct: 101 ERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKI-SGQNGTFKKSTVLQLGI 158
Query: 322 AEVLLALEYLHMLGIVYRDLKPENVLV--REDGHIMLSDFDLSLR 364
+L LEY+H V+ D+K N+L+ + + L+D+ LS R
Sbjct: 159 -RMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYR 202
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 219 KKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQSL- 270
K LG G G V L+E G A+K++ + EK L +E E+++ +
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK--DLSDLISEMEMMKMIG 91
Query: 271 DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQ--RQPG------------KYFSEQA 316
H + L D +++E+ G+L Q R PG + S +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 317 VKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ +V +EYL ++RDL NVLV ED + ++DF L+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V ++E G A+K++ + EK L +E E+++
Sbjct: 28 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK--DLSDLVSEMEMMKM 85
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQP-GKYFS-------EQAVKF 319
+ H + L D +++E+ G+L LR R+P G +S E+ + F
Sbjct: 86 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 145
Query: 320 Y-----VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ +EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 146 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 193
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
VK+G + + + +G G G V + + + A+K++ K+ L +AQ E
Sbjct: 46 VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK----NKKAFLNQAQIEV 101
Query: 265 EILQSLDHP------FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVK 318
+L+ ++ ++ L HF CLV E +L+ L + + S +
Sbjct: 102 RLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTR 160
Query: 319 FYVAEVLLALEYLHM--LGIVYRDLKPENVLV 348
+ ++ AL +L L I++ DLKPEN+L+
Sbjct: 161 KFAQQMCTALLFLATPELSIIHCDLKPENILL 192
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R + + Y +PE++ G + A+D W+ G L E+ G+ F G+ N N + +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIVE 272
Query: 507 PLRFPESPVVS 517
L P + ++
Sbjct: 273 VLGIPPAHILD 283
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 205 VKDGVLGVGHFRLLKKLGCGDIGSVYLSELTGTKCYFAMKVMDKASLEKRKKLLRAQTER 264
VK+G + + + +G G G V + + + A+K++ K+ L +AQ E
Sbjct: 46 VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK----NKKAFLNQAQIEV 101
Query: 265 EILQSLDHP------FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVK 318
+L+ ++ ++ L HF CLV E +L+ L + + S +
Sbjct: 102 RLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTR 160
Query: 319 FYVAEVLLALEYLHM--LGIVYRDLKPENVLV 348
+ ++ AL +L L I++ DLKPEN+L+
Sbjct: 161 KFAQQMCTALLFLATPELSIIHCDLKPENILL 192
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 447 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQ 506
R + + Y +PE++ G + A+D W+ G L E+ G+ F G+ N N + +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIVE 272
Query: 507 PLRFPESPVVS 517
L P + ++
Sbjct: 273 VLGIPPAHILD 283
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 450 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSENRATLYNVVGQPLR 509
+ +GT E+ APE + E + +VD + FG E + P+ +N A +Y V ++
Sbjct: 189 AVIGTPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVK 247
Query: 510 FPESPVVSF-SARDLIKGLLVKEPQNRLACRRGATEIKQHPFFQ 552
V+ +++I+G + + R + + ++ H FFQ
Sbjct: 248 PASFDKVAIPEVKEIIEGCIRQNKDERYSIK----DLLNHAFFQ 287
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V ++E G A+K++ + EK L +E E+++
Sbjct: 31 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK--DLSDLVSEMEMMKM 88
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQP-GKYFS-------EQAVKF 319
+ H + L D +++E+ G+L LR R+P G +S E+ + F
Sbjct: 89 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 148
Query: 320 Y-----VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ +EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 149 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 196
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 290 LVMEFCPGGDLHT-LRQRQ----PGK-----YFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+++EFC G+L T LR ++ P K + + + + Y +V +E+L ++R
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHR 168
Query: 340 DLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVK 373
DL N+L+ E + + DF L+ P V+
Sbjct: 169 DLAARNILLSEKNVVKIXDFGLARDIYKDPDYVR 202
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 493
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 198 EAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVY---LSELTGTKCYFAMKVMDKASLEKR 254
+A+Q V + L V HF + +G G G VY L + G K + A+K +++ +
Sbjct: 17 QAVQHVVIGPSSLIV-HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DI 71
Query: 255 KKLLRAQTEREILQSLDHP-FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
++ + TE I++ HP L L ++ +V+ + GDL + +
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 131
Query: 314 EQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + F + +V ++YL V+RDL N ++ E + ++DF L+
Sbjct: 132 KDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V ++E G A+K++ + EK L +E E+++
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK--DLSDLVSEMEMMKM 96
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQP-GKYFS-------EQAVKF 319
+ H + L D +++E+ G+L LR R+P G +S E+ + F
Sbjct: 97 IGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 320 Y-----VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ +EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 217 LLKKLGCGDIGSVYLSELTGTK-------CYFAMKVMDKASLEKRKKLLRAQTEREILQS 269
L K LG G G V ++E G A+K++ + EK L +E E+++
Sbjct: 26 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK--DLSDLVSEMEMMKM 83
Query: 270 L-DHPFLPTLYTHFETDKFSCLVMEFCPGGDLHT-LRQRQP-GKYFS-------EQAVKF 319
+ H + L D +++E+ G+L LR R+P G +S E+ + F
Sbjct: 84 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 143
Query: 320 Y-----VAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
++ +EYL ++RDL NVLV E+ + ++DF L+
Sbjct: 144 KDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA 191
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 198 EAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELT---GTKCYFAMKVMDKASLEKR 254
+A+Q V + L V HF + +G G G VY L G K + A+K +++ +
Sbjct: 36 QAVQHVVIGPSSLIV-HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDI 90
Query: 255 KKLLRAQTEREILQSLDHP-FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
++ + TE I++ HP L L ++ +V+ + GDL + +
Sbjct: 91 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 150
Query: 314 EQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + F + +V ++YL V+RDL N ++ E + ++DF L+
Sbjct: 151 KDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 198
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 198 EAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVY---LSELTGTKCYFAMKVMDKASLEKR 254
+A+Q V + L V HF + +G G G VY L + G K + A+K +++ +
Sbjct: 37 QAVQHVVIGPSSLIV-HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DI 91
Query: 255 KKLLRAQTEREILQSLDHP-FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
++ + TE I++ HP L L ++ +V+ + GDL + +
Sbjct: 92 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 151
Query: 314 EQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + F + +V ++YL V+RDL N ++ E + ++DF L+
Sbjct: 152 KDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 199
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 198 EAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVYLSELT---GTKCYFAMKVMDKASLEKR 254
+A+Q V + L V HF + +G G G VY L G K + A+K +++ +
Sbjct: 10 QAVQHVVIGPSSLIV-HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DI 64
Query: 255 KKLLRAQTEREILQSLDHP-FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
++ + TE I++ HP L L ++ +V+ + GDL + +
Sbjct: 65 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 124
Query: 314 EQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + F + +V ++YL V+RDL N ++ E + ++DF L+
Sbjct: 125 KDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 172
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 290 LVMEFCPGGDLHT-LRQRQ----PGK-------YFSEQAVKFYVAEVLLALEYLHMLGIV 337
+++EFC G+L T LR ++ P K + + + + Y +V +E+L +
Sbjct: 111 VIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI 170
Query: 338 YRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVK 373
+RDL N+L+ E + + DF L+ P V+
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 493
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 198 EAIQAVRVKDGVLGVGHFRLLKKLGCGDIGSVY---LSELTGTKCYFAMKVMDKASLEKR 254
+A+Q V + L V HF + +G G G VY L + G K + A+K +++ +
Sbjct: 18 QAVQHVVIGPSSLIV-HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DI 72
Query: 255 KKLLRAQTEREILQSLDHP-FLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFS 313
++ + TE I++ HP L L ++ +V+ + GDL + +
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV 132
Query: 314 EQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLS 362
+ + F + +V ++YL V+RDL N ++ E + ++DF L+
Sbjct: 133 KDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 290 LVMEFCPGGDLHT-LRQRQ----PGK-----YFSEQAVKFYVAEVLLALEYLHMLGIVYR 339
+++EFC G+L T LR ++ P K + + + + Y +V +E+L ++R
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHR 168
Query: 340 DLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVK 373
DL N+L+ E + + DF L+ P V+
Sbjct: 169 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 456 EYLAPEIIKGEGHGSAVDWWTFGIFLYELL-FGKTPFKG 493
+++APE I + D W+FG+ L+E+ G +P+ G
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,329,634
Number of Sequences: 62578
Number of extensions: 699611
Number of successful extensions: 4348
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 1505
Number of HSP's gapped (non-prelim): 2102
length of query: 604
length of database: 14,973,337
effective HSP length: 104
effective length of query: 500
effective length of database: 8,465,225
effective search space: 4232612500
effective search space used: 4232612500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)