Query 007438
Match_columns 604
No_of_seqs 120 out of 137
Neff 3.8
Searched_HMMs 46136
Date Thu Mar 28 23:36:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007438.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007438hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02501 digalactosyldiacylgly 100.0 9E-198 2E-202 1615.6 43.9 593 4-601 3-615 (794)
2 PLN02846 digalactosyldiacylgly 100.0 8.2E-66 1.8E-70 551.7 20.6 292 307-599 2-295 (462)
3 cd03817 GT1_UGDG_like This fam 99.9 1.9E-21 4.2E-26 186.2 18.7 259 311-599 1-271 (374)
4 PLN02871 UDP-sulfoquinovose:DA 99.9 4.5E-21 9.9E-26 202.5 21.3 255 307-599 56-324 (465)
5 PRK10307 putative glycosyl tra 99.9 1.1E-20 2.4E-25 194.3 21.4 268 310-598 1-295 (412)
6 cd03814 GT1_like_2 This family 99.8 1.2E-19 2.7E-24 174.8 19.8 252 311-598 1-258 (364)
7 cd03796 GT1_PIG-A_like This fa 99.8 3.5E-19 7.7E-24 183.1 17.6 246 311-598 1-261 (398)
8 cd04962 GT1_like_5 This family 99.7 3.6E-17 7.7E-22 162.2 15.9 252 310-597 1-263 (371)
9 cd03794 GT1_wbuB_like This fam 99.7 6E-17 1.3E-21 155.0 16.9 265 311-599 1-287 (394)
10 TIGR03449 mycothiol_MshA UDP-N 99.7 4.5E-17 9.7E-22 166.0 15.5 262 312-599 1-295 (405)
11 cd03801 GT1_YqgM_like This fam 99.7 4.4E-16 9.6E-21 146.5 18.4 257 311-599 1-268 (374)
12 cd03820 GT1_amsD_like This fam 99.7 1.6E-15 3.4E-20 143.3 20.4 235 311-594 1-242 (348)
13 cd03795 GT1_like_4 This family 99.7 1.2E-15 2.6E-20 149.0 18.5 244 311-598 1-255 (357)
14 cd03816 GT1_ALG1_like This fam 99.7 6.6E-16 1.4E-20 161.8 16.1 259 308-598 2-306 (415)
15 cd03792 GT1_Trehalose_phosphor 99.7 5.6E-15 1.2E-19 150.0 20.3 243 311-595 1-260 (372)
16 cd03802 GT1_AviGT4_like This f 99.7 2.9E-15 6.2E-20 145.8 16.3 226 310-599 1-236 (335)
17 cd05844 GT1_like_7 Glycosyltra 99.6 3.7E-15 8.1E-20 147.6 15.8 174 412-598 74-256 (367)
18 TIGR02095 glgA glycogen/starch 99.6 2.5E-15 5.5E-20 159.1 15.4 275 310-597 1-356 (473)
19 PRK09922 UDP-D-galactose:(gluc 99.6 3.8E-15 8.3E-20 151.5 14.7 228 310-597 1-246 (359)
20 PLN02275 transferase, transfer 99.6 1.4E-14 2.9E-19 149.4 18.9 177 416-598 96-298 (371)
21 PRK00654 glgA glycogen synthas 99.6 4.4E-15 9.4E-20 158.0 15.5 270 310-594 1-345 (466)
22 cd03812 GT1_CapH_like This fam 99.6 4.9E-15 1.1E-19 145.5 14.4 246 311-595 1-257 (358)
23 cd03811 GT1_WabH_like This fam 99.6 1.9E-14 4.2E-19 135.7 16.9 243 311-597 1-256 (353)
24 cd03805 GT1_ALG2_like This fam 99.6 3.5E-14 7.7E-19 142.9 19.8 177 416-599 90-292 (392)
25 cd03821 GT1_Bme6_like This fam 99.6 3.9E-14 8.4E-19 135.7 18.8 263 311-599 1-274 (375)
26 cd03798 GT1_wlbH_like This fam 99.6 4.8E-14 1E-18 133.9 18.1 258 312-599 1-271 (377)
27 PRK15427 colanic acid biosynth 99.6 1.6E-14 3.4E-19 151.7 15.7 170 412-599 110-291 (406)
28 cd04951 GT1_WbdM_like This fam 99.6 3.9E-14 8.4E-19 138.6 17.1 174 411-597 70-255 (360)
29 PLN02939 transferase, transfer 99.6 5.9E-14 1.3E-18 162.1 21.3 401 157-598 351-848 (977)
30 cd03800 GT1_Sucrose_synthase T 99.6 3.6E-14 7.8E-19 141.4 16.8 183 413-599 92-295 (398)
31 TIGR02149 glgA_Coryne glycogen 99.6 3.5E-14 7.7E-19 142.8 16.8 249 310-597 1-271 (388)
32 cd04955 GT1_like_6 This family 99.6 7E-14 1.5E-18 137.3 17.7 249 311-599 1-260 (363)
33 cd03809 GT1_mtfB_like This fam 99.6 8.5E-14 1.8E-18 134.9 17.8 251 311-599 1-265 (365)
34 PLN02316 synthase/transferase 99.6 2.1E-13 4.6E-18 159.1 22.8 273 293-597 562-910 (1036)
35 cd03799 GT1_amsK_like This is 99.6 6.3E-14 1.4E-18 136.8 14.9 237 311-598 1-247 (355)
36 cd03822 GT1_ecORF704_like This 99.5 1.6E-13 3.5E-18 133.0 16.4 239 311-598 1-259 (366)
37 PRK14098 glycogen synthase; Pr 99.5 2.5E-13 5.5E-18 147.0 17.0 278 308-598 4-373 (489)
38 TIGR02472 sucr_P_syn_N sucrose 99.5 2.2E-13 4.7E-18 143.7 15.5 254 321-598 23-328 (439)
39 cd03819 GT1_WavL_like This fam 99.5 3.2E-13 6.8E-18 132.6 15.5 168 410-596 68-255 (355)
40 cd03791 GT1_Glycogen_synthase_ 99.5 2.3E-13 5.1E-18 142.9 14.8 271 311-596 1-360 (476)
41 PRK14099 glycogen synthase; Pr 99.5 7.4E-13 1.6E-17 143.3 18.2 272 308-594 2-358 (485)
42 cd03807 GT1_WbnK_like This fam 99.5 7.9E-13 1.7E-17 126.2 14.8 246 311-596 1-260 (365)
43 cd03808 GT1_cap1E_like This fa 99.5 9.8E-13 2.1E-17 124.9 15.0 239 311-596 1-255 (359)
44 TIGR03088 stp2 sugar transfera 99.4 1.1E-12 2.3E-17 132.4 14.1 177 410-596 71-264 (374)
45 PRK15179 Vi polysaccharide bio 99.4 1E-12 2.2E-17 148.6 13.2 181 410-597 390-584 (694)
46 cd03825 GT1_wcfI_like This fam 99.4 6.8E-12 1.5E-16 123.1 17.1 220 310-597 1-254 (365)
47 cd03823 GT1_ExpE7_like This fa 99.4 3.2E-12 7E-17 122.9 13.9 243 311-597 1-253 (359)
48 cd03813 GT1_like_3 This family 99.4 2.3E-12 5E-17 137.7 13.8 166 419-593 172-360 (475)
49 PRK15484 lipopolysaccharide 1, 99.4 6.4E-12 1.4E-16 130.3 16.6 159 416-598 95-268 (380)
50 cd03818 GT1_ExpC_like This fam 99.3 4.7E-11 1E-15 123.0 17.9 178 417-599 84-293 (396)
51 KOG1111 N-acetylglucosaminyltr 99.3 8.1E-12 1.8E-16 131.9 11.5 247 310-599 1-264 (426)
52 cd03804 GT1_wbaZ_like This fam 99.3 7.1E-11 1.5E-15 118.3 15.6 161 413-598 76-253 (351)
53 TIGR02470 sucr_synth sucrose s 99.2 1.1E-10 2.4E-15 133.6 15.8 173 419-596 384-628 (784)
54 TIGR03087 stp1 sugar transfera 99.2 6.7E-11 1.4E-15 122.2 12.6 174 412-597 96-290 (397)
55 TIGR02468 sucrsPsyn_pln sucros 99.2 2.3E-10 5.1E-15 134.0 18.5 176 420-599 310-560 (1050)
56 TIGR02918 accessory Sec system 99.2 9.4E-11 2E-15 128.0 13.5 162 417-596 208-385 (500)
57 PRK15490 Vi polysaccharide bio 99.2 3E-11 6.5E-16 134.1 9.2 185 405-597 265-465 (578)
58 PRK05749 3-deoxy-D-manno-octul 99.2 5.4E-10 1.2E-14 116.7 15.9 169 411-594 115-295 (425)
59 cd03806 GT1_ALG11_like This fa 99.1 3.9E-10 8.4E-15 119.3 12.8 116 476-599 182-317 (419)
60 cd03785 GT1_MurG MurG is an N- 99.1 2E-10 4.4E-15 114.7 9.4 162 411-597 80-245 (350)
61 cd01635 Glycosyltransferase_GT 99.1 1.9E-09 4.2E-14 97.5 14.3 167 312-597 1-171 (229)
62 cd04949 GT1_gtfA_like This fam 99.1 7.6E-10 1.7E-14 111.5 12.8 165 419-597 98-271 (372)
63 PRK13609 diacylglycerol glucos 99.1 4.3E-10 9.2E-15 115.4 10.3 247 308-598 3-267 (380)
64 PLN00142 sucrose synthase 99.1 3.6E-10 7.8E-15 129.9 10.5 176 419-597 407-652 (815)
65 cd04946 GT1_AmsK_like This fam 99.1 2.6E-09 5.7E-14 112.1 15.3 258 312-599 2-301 (407)
66 PRK00726 murG undecaprenyldiph 99.0 9.5E-10 2.1E-14 111.4 8.1 163 410-598 81-246 (357)
67 PRK09814 beta-1,6-galactofuran 98.9 2.6E-09 5.7E-14 109.3 7.8 183 383-599 30-219 (333)
68 cd03788 GT1_TPS Trehalose-6-Ph 98.9 5.2E-09 1.1E-13 112.8 8.8 161 420-584 131-325 (460)
69 TIGR01133 murG undecaprenyldip 98.8 4.7E-08 1E-12 97.7 12.0 156 410-592 80-240 (348)
70 PLN02949 transferase, transfer 98.7 9.7E-08 2.1E-12 103.7 13.6 110 483-599 219-347 (463)
71 PRK10125 putative glycosyl tra 98.7 1E-06 2.2E-11 93.6 18.4 170 411-597 84-296 (405)
72 cd03786 GT1_UDP-GlcNAc_2-Epime 98.7 1.2E-07 2.5E-12 95.7 10.6 174 410-596 78-267 (363)
73 PF13439 Glyco_transf_4: Glyco 98.7 2E-08 4.4E-13 88.5 4.2 169 314-515 2-177 (177)
74 PLN02605 monogalactosyldiacylg 98.6 8.3E-08 1.8E-12 99.8 7.4 167 410-598 90-276 (382)
75 PHA01633 putative glycosyl tra 98.5 8.2E-07 1.8E-11 93.5 12.7 145 428-597 53-211 (335)
76 PRK13608 diacylglycerol glucos 98.5 3.2E-07 6.8E-12 96.3 8.8 164 409-598 93-267 (391)
77 PHA01630 putative group 1 glyc 98.5 1.5E-06 3.2E-11 90.5 12.3 110 447-578 71-188 (331)
78 COG0297 GlgA Glycogen synthase 98.4 5.6E-06 1.2E-10 91.4 14.9 256 310-585 1-347 (487)
79 PF13579 Glyco_trans_4_4: Glyc 98.4 9.4E-07 2E-11 76.7 6.6 136 328-499 7-144 (160)
80 cd04950 GT1_like_1 Glycosyltra 98.3 2.6E-06 5.5E-11 88.4 10.1 162 418-599 100-266 (373)
81 PF00534 Glycos_transf_1: Glyc 98.2 2E-06 4.3E-11 77.9 5.8 76 521-596 4-82 (172)
82 PLN03063 alpha,alpha-trehalose 98.1 4.6E-06 9.9E-11 96.6 8.1 162 421-586 148-342 (797)
83 cd03793 GT1_Glycogen_synthase_ 98.1 1.1E-05 2.4E-10 90.8 9.3 135 419-559 147-326 (590)
84 PRK00025 lpxB lipid-A-disaccha 98.0 1.8E-05 3.8E-10 81.1 9.0 168 410-593 75-252 (380)
85 TIGR00236 wecB UDP-N-acetylglu 98.0 1.2E-05 2.6E-10 82.6 6.5 201 383-597 49-265 (365)
86 PRK14501 putative bifunctional 97.9 4.7E-05 1E-09 87.0 10.7 157 421-585 134-327 (726)
87 TIGR02400 trehalose_OtsA alpha 97.9 3.2E-05 7E-10 84.3 8.7 161 421-585 128-321 (456)
88 PF13477 Glyco_trans_4_2: Glyc 97.7 0.00014 3E-09 64.3 7.5 138 311-492 1-139 (139)
89 TIGR00215 lpxB lipid-A-disacch 97.6 0.00019 4.2E-09 75.9 8.7 168 411-593 80-258 (385)
90 COG0438 RfaG Glycosyltransfera 97.5 0.0028 6.1E-08 58.7 13.2 106 484-596 150-266 (381)
91 TIGR02398 gluc_glyc_Psyn gluco 97.2 0.0015 3.2E-08 72.6 9.7 64 507-573 255-330 (487)
92 PF13692 Glyco_trans_1_4: Glyc 96.8 0.0012 2.6E-08 57.7 3.6 57 534-595 4-61 (135)
93 PLN03064 alpha,alpha-trehalose 96.8 0.0038 8.3E-08 74.1 8.6 158 421-584 232-424 (934)
94 TIGR02094 more_P_ylases alpha- 95.8 0.08 1.7E-06 60.5 12.1 64 529-592 386-463 (601)
95 TIGR03713 acc_sec_asp1 accesso 94.5 0.076 1.6E-06 59.5 6.6 54 531-585 318-376 (519)
96 PRK12446 undecaprenyldiphospho 93.7 0.6 1.3E-05 49.4 11.1 119 412-550 83-203 (352)
97 PF08323 Glyco_transf_5: Starc 93.5 0.06 1.3E-06 54.1 3.2 41 311-354 1-45 (245)
98 TIGR03590 PseG pseudaminic aci 92.6 1.5 3.2E-05 45.0 11.8 228 311-598 1-235 (279)
99 TIGR03492 conserved hypothetic 87.0 2.2 4.7E-05 46.1 8.0 158 414-587 85-263 (396)
100 PF09314 DUF1972: Domain of un 86.9 3.2 6.9E-05 41.3 8.4 153 310-500 2-169 (185)
101 COG3914 Spy Predicted O-linked 86.5 18 0.00039 42.1 15.0 259 275-598 222-500 (620)
102 cd03784 GT1_Gtf_like This fami 83.4 5.9 0.00013 41.4 8.9 37 310-352 1-38 (401)
103 KOG1387 Glycosyltransferase [C 81.0 17 0.00037 40.3 11.4 107 484-596 222-346 (465)
104 COG1519 KdtA 3-deoxy-D-manno-o 79.5 29 0.00063 38.9 12.8 164 412-591 115-289 (419)
105 COG0707 MurG UDP-N-acetylgluco 78.1 14 0.00031 39.9 9.9 160 411-597 82-245 (357)
106 PLN02205 alpha,alpha-trehalose 70.9 11 0.00023 45.4 7.3 159 422-584 203-400 (854)
107 KOG0853 Glycosyltransferase [C 69.0 75 0.0016 36.5 13.0 247 302-597 66-356 (495)
108 PRK10117 trehalose-6-phosphate 68.0 18 0.00039 41.0 7.9 159 421-584 124-316 (474)
109 PF00982 Glyco_transf_20: Glyc 67.1 14 0.0003 41.6 6.8 146 412-564 135-308 (474)
110 PRK02812 ribose-phosphate pyro 66.0 12 0.00027 40.2 5.9 124 258-388 14-141 (330)
111 PF13528 Glyco_trans_1_3: Glyc 60.5 28 0.00061 35.1 7.0 141 410-573 84-226 (318)
112 PF11997 DUF3492: Domain of un 59.4 23 0.00051 36.8 6.4 78 420-498 172-259 (268)
113 PHA03392 egt ecdysteroid UDP-g 57.9 5.2 0.00011 44.9 1.5 22 328-352 38-59 (507)
114 PF12000 Glyco_trans_4_3: Gkyc 52.6 34 0.00075 33.7 6.0 44 472-515 123-171 (171)
115 PRK14974 cell division protein 51.1 31 0.00067 37.3 5.9 92 309-432 139-234 (336)
116 TIGR01251 ribP_PPkin ribose-ph 50.7 31 0.00068 36.4 5.7 72 309-387 47-120 (308)
117 TIGR03568 NeuC_NnaA UDP-N-acet 50.4 63 0.0014 34.6 8.0 171 410-598 83-273 (365)
118 PF04007 DUF354: Protein of un 49.1 82 0.0018 34.1 8.7 152 328-529 16-177 (335)
119 cd02024 NRK1 Nicotinamide ribo 45.7 9.2 0.0002 37.8 0.9 29 275-303 139-167 (187)
120 PF02684 LpxB: Lipid-A-disacch 45.5 43 0.00092 36.8 5.9 163 410-587 72-243 (373)
121 TIGR00661 MJ1255 conserved hyp 44.7 20 0.00043 37.0 3.2 44 411-459 84-127 (321)
122 PRK03092 ribose-phosphate pyro 44.5 46 0.001 35.3 5.9 51 308-359 35-85 (304)
123 PF13793 Pribosyltran_N: N-ter 44.3 47 0.001 30.6 5.2 51 308-359 46-96 (116)
124 PRK07199 phosphoribosylpyropho 42.9 59 0.0013 34.5 6.3 71 308-387 48-119 (301)
125 PRK00553 ribose-phosphate pyro 40.4 38 0.00083 36.5 4.6 50 309-359 56-105 (332)
126 PLN02718 Probable galacturonos 39.6 85 0.0018 36.9 7.3 153 157-332 165-334 (603)
127 COG0052 RpsB Ribosomal protein 39.5 43 0.00094 35.3 4.6 57 421-482 157-218 (252)
128 PRK01259 ribose-phosphate pyro 36.9 61 0.0013 34.5 5.4 73 308-387 46-119 (309)
129 cd04299 GT1_Glycogen_Phosphory 35.4 80 0.0017 38.0 6.5 44 530-573 476-523 (778)
130 PF06925 MGDG_synth: Monogalac 34.8 30 0.00065 32.7 2.5 71 410-498 79-151 (169)
131 KOG2941 Beta-1,4-mannosyltrans 33.8 5.3E+02 0.011 29.3 11.7 169 418-591 101-322 (444)
132 PF08824 Serine_rich: Serine r 33.7 31 0.00068 33.9 2.4 84 12-100 23-109 (159)
133 PLN02369 ribose-phosphate pyro 33.0 89 0.0019 33.2 5.8 51 308-359 37-87 (302)
134 TIGR01658 EYA-cons_domain eyes 31.9 48 0.001 35.2 3.5 24 562-588 229-252 (274)
135 PF09861 DUF2088: Domain of un 29.8 1.5E+02 0.0032 30.0 6.5 66 307-384 52-120 (204)
136 PRK05590 hypothetical protein; 29.2 39 0.00084 33.7 2.2 32 566-603 44-76 (166)
137 PRK02269 ribose-phosphate pyro 29.2 1E+02 0.0022 33.1 5.5 50 309-359 52-101 (320)
138 PRK04923 ribose-phosphate pyro 28.8 84 0.0018 33.7 4.8 51 308-359 52-102 (319)
139 COG0462 PrsA Phosphoribosylpyr 28.8 1.5E+02 0.0033 32.3 6.7 170 273-453 12-193 (314)
140 PLN02297 ribose-phosphate pyro 28.3 1.1E+02 0.0024 33.2 5.6 49 308-359 65-113 (326)
141 PTZ00145 phosphoribosylpyropho 27.7 86 0.0019 35.5 4.8 50 308-358 165-214 (439)
142 PF00336 DNA_pol_viral_C: DNA 27.0 91 0.002 32.5 4.4 82 318-435 158-241 (245)
143 cd00221 Vsr Very Short Patch R 26.6 1.3E+02 0.0028 27.9 5.0 72 274-348 19-110 (115)
144 PRK00934 ribose-phosphate pyro 26.4 2.1E+02 0.0045 30.1 7.1 67 309-382 46-113 (285)
145 cd06167 LabA_like LabA_like pr 25.4 1.4E+02 0.0031 27.1 5.1 58 542-600 78-137 (149)
146 COG3980 spsG Spore coat polysa 24.2 1.5E+02 0.0033 32.3 5.6 38 310-348 1-38 (318)
147 cd07365 MhpB_like Subunit B of 23.6 69 0.0015 34.3 3.1 26 410-435 32-57 (310)
148 PRK00286 xseA exodeoxyribonucl 23.5 88 0.0019 34.4 3.9 36 293-333 119-154 (438)
149 PRK02458 ribose-phosphate pyro 23.5 1.4E+02 0.003 32.1 5.3 50 309-359 56-105 (323)
150 PF03852 Vsr: DNA mismatch end 23.4 24 0.00052 30.9 -0.3 49 269-319 17-65 (75)
151 PF08822 DUF1804: Protein of u 23.3 1.4E+02 0.003 29.8 4.8 88 152-252 46-144 (165)
152 KOG0832 Mitochondrial/chloropl 22.5 1.5E+02 0.0032 31.4 5.0 75 405-482 158-235 (251)
153 PF06570 DUF1129: Protein of u 21.5 37 0.00079 33.7 0.5 61 185-249 5-68 (206)
154 PF05693 Glycogen_syn: Glycoge 20.9 4.6E+02 0.0099 31.3 9.0 80 480-559 217-321 (633)
155 PF12641 Flavodoxin_3: Flavodo 20.1 1.5E+02 0.0033 28.8 4.4 48 294-341 45-99 (160)
No 1
>PLN02501 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=8.7e-198 Score=1615.56 Aligned_cols=593 Identities=83% Similarity=1.304 Sum_probs=567.9
Q ss_pred CCCCCCCCcchhhhhhhhHHhhcchhhhHHHHHHhhhhhhhhhhhhhHHHHHHHhhcCCC----------CCchhhhHHh
Q 007438 4 ETQATSSSKAFSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSANRS----------SAPAEIDFVK 73 (604)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 73 (604)
.+++.++++||||||||||||||||+|||||||+|||||||||++|||||||||||||++ +|++|+|||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~sa~~~~~l~~~~~~s~~~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (794)
T PLN02501 3 LSMTLSSTNAFSFLSKGWREVRDSADADLQLMRARANSFKNLASSFDREIENFFNSASRSSFPVGSPSASSFPTEIDFVK 82 (794)
T ss_pred cceeccCcchHHHHHhhHHHhhhcchhhHHHHHHHhhhhhhhhhhhHHHHHHHhhhccccccCCCCcccCCCccchHHHH
Confidence 456777888999999999999999999999999999999999999999999999999983 8999999999
Q ss_pred hhchhhhhhhhhcCchhhhHHHhhhcCCCcceeechhhhhhhhhcccccccccCCCccccccccc---cccccccccccc
Q 007438 74 KLQPKISEFRRVYSAPEISKRVLEKWGPRARIRIDLSAIRNAIVSDVDVDAERDGGGIIEFDRGK---RGRVGFRELWGE 150 (604)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 150 (604)
+||||||||||+||+|+|++||||+|+|++++||||||||||||++++. ++++|+|+++|+| +.|.||++||++
T Consensus 83 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~lsai~~a~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 159 (794)
T PLN02501 83 KLQPKISEFRRVYSAPEISRKVLEKWGPRAKLGIDLSAIKNAIVAEMEL---DDRGGIVEFDRVRRRRNSRVRFTEFWGE 159 (794)
T ss_pred HhchhHHHHhhhccCchhhhhhhhccCCcccccccHHHHhhhhcccccc---ccccCcccccccccccccccchhhhhhh
Confidence 9999999999999999999999999999999999999999999998764 4689999987665 335788899985
Q ss_pred ------cccCcchhHHHHHHHHHHHHHhhchhhhhHhcCCCchhHHHHHHhhhhhhccCCCCCCCCCCCChHHHHHHHHH
Q 007438 151 ------REVGEWEPIRTLKMRLREFERKRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVR 224 (604)
Q Consensus 151 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (604)
++.+|||||||||.+|||||||++++ |||+||||+|||||||+|||+||||||+||||||||||||||||||
T Consensus 160 ~~~~~~~~~~~~~~~r~~~~~~~e~e~~~~~~--~~~~~~~~~~~~~k~k~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (794)
T PLN02501 160 AKEEGEGQFGEWEPIRALKTRFRELEKRSESL--EIFGGFKNSEFVEKLKSSLKAIYKEPQESKDVPPLDVPELLAYLVR 237 (794)
T ss_pred hhhcccccccchhhHHHHHHHHHHHHhhcchH--HHhcccchHHHHHHHHHHHHhhhcCccccccCCCcchHHHHHHHHh
Confidence 45899999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccchhhhHHHHHHHhhhhhhhhhhhhcccCCCccccccCCCccccchhhhccccCcccccCcccccCCCCC
Q 007438 225 QSGPFLDHLGVKRDLCDKIVESLCSKRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQSTGHHYEGGFWTDFGKDD 304 (604)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 304 (604)
||||||||||||||+||||||+||||||+|++||++|++++++++|+|++||||||||||||||||||+||||||+.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (794)
T PLN02501 238 QSEPFLDQLGVRKDICDKIVESLCSKRKNQLLLRSLSAGESSLLESDNHNDELDLRIASVLQSTGHCYDGGFWTDSSKHE 317 (794)
T ss_pred hccchhhhhhhhHHHHHHHHHHHHhhccccccccccccccccccccccccccchhhhhhhhhccCccccCCcccCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCC-ceeCChhHHHHHHHHHHHHH
Q 007438 305 LSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEER 383 (604)
Q Consensus 305 ~~~~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn-~rF~SpeeQe~~ir~wl~~r 383 (604)
++|++|||+|||||+||||||||||||||||||++.|.++||||||||+++||++|||| ++|.||||||+|||+||++|
T Consensus 318 ~~~~~r~~~ivTtAslPWmTGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r 397 (794)
T PLN02501 318 LSDGKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEER 397 (794)
T ss_pred cccCCCeEEEEEcccCcccccccccHHHHHHHhcccCCceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998899999999999999999998 99999999999999999999
Q ss_pred hCCCCCceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhh
Q 007438 384 VGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKRE 463 (604)
Q Consensus 384 ~g~~~~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~ 463 (604)
+||+++|+|.||||||+++++||+|+|++++.|++|+|||||++|||||||||||.+|+++++|||++|||||++|++||
T Consensus 398 ~g~~~~~~i~fYpg~~~~~~~SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~PVVasyHTny~eYl~~y 477 (794)
T PLN02501 398 IGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKRE 477 (794)
T ss_pred cCCCCCceEEeecchhccCCccccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcCCeEEEEeCCcHHHHhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHhhCCceeeCchhhhhccCCcceeEEeecCCCCCCCccchhhhhhccCCCCceEEEEecccc
Q 007438 464 KNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVW 543 (604)
Q Consensus 464 ~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~ks~V~nVhGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvw 543 (604)
++|++..++++++++++.+.|||+||++|++++++++++|+||||||+.+|.|+++...++..+...+.+++||||||+|
T Consensus 478 ~~g~L~~~llk~l~~~v~r~hcD~VIaPS~atq~L~~~vI~nVnGVDte~F~P~~r~~~~r~lgi~~~~kgiLfVGRLa~ 557 (794)
T PLN02501 478 KNGALQAFFVKHINNWVTRAYCHKVLRLSAATQDLPKSVICNVHGVNPKFLKIGEKVAEERELGQQAFSKGAYFLGKMVW 557 (794)
T ss_pred cchhHHHHHHHHHHHHHHHhhCCEEEcCCHHHHHhcccceeecccccccccCCcchhHHHHhcCCccccCceEEEEcccc
Confidence 99999999999999999999999999999999999999999999999999999988766666776667788999999999
Q ss_pred ccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCCcEEEcCCCCCCccc
Q 007438 544 AKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADDS 601 (604)
Q Consensus 544 EKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL~V~FtG~ldhad~~ 601 (604)
+||++.||++++.+....++++|+|||+||++++|+++++++++.|.|+|..++..+.
T Consensus 558 EKGld~LLeAla~L~~~~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~dd~~~l 615 (794)
T PLN02501 558 AKGYRELIDLLAKHKNELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGRDHADDS 615 (794)
T ss_pred cCCHHHHHHHHHHHHhhCCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCCCCHHHH
Confidence 9999999999999887778999999999999999999999999999999999876543
No 2
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=8.2e-66 Score=551.66 Aligned_cols=292 Identities=63% Similarity=1.169 Sum_probs=266.8
Q ss_pred CCCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCC-ceeCChhHHHHHHHHHHHHHhC
Q 007438 307 DKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVG 385 (604)
Q Consensus 307 ~~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn-~rF~SpeeQe~~ir~wl~~r~g 385 (604)
+++||||||||||+|||||||+|++++|+||+++||++|+||+||++..+|+.|||| ++|.||++||+|||+|+.++++
T Consensus 2 ~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~v~ 81 (462)
T PLN02846 2 QKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEERIS 81 (462)
T ss_pred CCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCeEE
Confidence 468999999999999999999999999999999995599999999999899999998 9999999999999999999999
Q ss_pred CCCCceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhcc
Q 007438 386 FKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKN 465 (604)
Q Consensus 386 ~~~~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~ 465 (604)
+.+.+++++||+||+...++|+|.+++.+.|++++|||||+++|++|||+++|.+|++++++||++|||||.+|++|+++
T Consensus 82 r~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~vV~tyHT~y~~Y~~~~~~ 161 (462)
T PLN02846 82 FLPKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKFRLVIGIVHTNYLEYVKREKN 161 (462)
T ss_pred EecccccccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcCCcEEEEECCChHHHHHHhcc
Confidence 99999999999999998899999999999999999999999999999999899999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhhCCceeeCchhhhhccCCcceeEEeecCCCCCCCccchhhhhhccCCCCceEEEEecccccc
Q 007438 466 GALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAK 545 (604)
Q Consensus 466 G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~ks~V~nVhGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEK 545 (604)
|...+++.+++++++.+.|||+||++|.+++++.+.++++|+|||+.+|+++.+.......+...+.++++|||||+|||
T Consensus 162 g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~l~~~~i~~v~GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK 241 (462)
T PLN02846 162 GRVKAFLLKYINSWVVDIYCHKVIRLSAATQDYPRSIICNVHGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSK 241 (462)
T ss_pred chHHHHHHHHHHHHHHHHhcCEEEccCHHHHHHhhCEEecCceechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccC
Confidence 99998899999999999899999999999999988899999999999999987642211122233467899999999999
Q ss_pred CHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCCcE-EEcCCCCCCc
Q 007438 546 GYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNL-NFQKGRDHAD 599 (604)
Q Consensus 546 GfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL~V-~FtG~ldhad 599 (604)
|++.||++++++....++++|+||||||++++|+++++++++.+ .|.|. ++.+
T Consensus 242 ~~~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~-~~~~ 295 (462)
T PLN02846 242 GYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGR-DHAD 295 (462)
T ss_pred CHHHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCC-CCHH
Confidence 99999999999888778999999999999999999999999855 45665 4444
No 3
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.88 E-value=1.9e-21 Score=186.23 Aligned_cols=259 Identities=22% Similarity=0.225 Sum_probs=184.8
Q ss_pred eEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCC-ceeCChhHHHHHHHHHHHHHhCCCCC
Q 007438 311 NVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKAD 389 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn-~rF~SpeeQe~~ir~wl~~r~g~~~~ 389 (604)
||.|+|+++.|..+|.+....--|.+|.+.|| +|+++.|.....+....+.. ..+..
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g~-~v~v~~~~~~~~~~~~~~~~~~~~~~--------------------- 58 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRGH-EVYVVAPSYPGAPEEEEVVVVRPFRV--------------------- 58 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHcCC-eEEEEeCCCCCCCccccccccccccc---------------------
Confidence 68999999999999999666666799999999 99999988765433221111 11110
Q ss_pred ceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCC-cEEEEEEcChhhHHhhhccchh
Q 007438 390 FKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGAL 468 (604)
Q Consensus 390 ~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyHTNY~eYary~~~G~l 468 (604)
...+++...... .....+...+...++||+|++.|+.++.. +..+.++.+ |+|.++|+.|.+|.++...+..
T Consensus 59 -~~~~~~~~~~~~----~~~~~~~~~~~~~~~Div~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (374)
T cd03817 59 -PTFKYPDFRLPL----PIPRALIIILKELGPDIVHTHTPFSLGLL--GLRVARKLGIPVVATYHTMYEDYTHYVPLGRL 131 (374)
T ss_pred -ccchhhhhhccc----cHHHHHHHHHhhcCCCEEEECCchhhhhH--HHHHHHHcCCCEEEEecCCHHHHHHHHhcccc
Confidence 001111111100 01122334578899999999999777665 444555544 9999999999999988766654
Q ss_pred HHH-HHH-HHHHHHHHhhCCceeeCchhhhhccC-----CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEec
Q 007438 469 QAF-FVK-HINNWVTRAYCDKVLRLSAATQDLPK-----SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGK 540 (604)
Q Consensus 469 ~ap-lvR-~~~r~~~r~yCdkVI~LS~avq~l~k-----s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGR 540 (604)
... ... .+.+.+.. .||.|++.|...++... ..+..| +|+++..|.+......+...+.......++|+|+
T Consensus 132 ~~~~~~~~~~~~~~~~-~~d~i~~~s~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~ 210 (374)
T cd03817 132 LARAVVRRKLSRRFYN-RCDAVIAPSEKIADLLREYGVKRPIEVIPTGIDLDRFEPVDGDDERRKLGIPEDEPVLLYVGR 210 (374)
T ss_pred hhHHHHHHHHHHHHhh-hCCEEEeccHHHHHHHHhcCCCCceEEcCCccchhccCccchhHHHHhcCCCCCCeEEEEEee
Confidence 433 333 56666666 89999999998776432 122222 4888888877554333334444556788999999
Q ss_pred cccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCCCc
Q 007438 541 MVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDHAD 599 (604)
Q Consensus 541 LvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldhad 599 (604)
+...||++.++++++.+....+++++.|+|+|+..+.+++.+.++++ ++.|+|.+++.+
T Consensus 211 ~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 271 (374)
T cd03817 211 LAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREE 271 (374)
T ss_pred eecccCHHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHH
Confidence 99999999999999988877788999999999999999999988887 899999987543
No 4
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.87 E-value=4.5e-21 Score=202.51 Aligned_cols=255 Identities=16% Similarity=0.163 Sum_probs=171.8
Q ss_pred CCCceEEEEecC-CCCcccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHH
Q 007438 307 DKKRNVAIVTTA-SLPWMTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEER 383 (604)
Q Consensus 307 ~~~r~IaIfTTA-sLPWmTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r 383 (604)
.+.|||++|++. +.|...|+. +..|. .+|.+.|| +|+++.|--...+ + +.++..-
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~--~~L~~~G~-eV~vlt~~~~~~~-~--~~g~~v~---------------- 113 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFI--RYLREMGD-EVLVVTTDEGVPQ-E--FHGAKVI---------------- 113 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHH--HHHHHCCC-eEEEEecCCCCCc-c--ccCceee----------------
Confidence 467999999984 577889988 66665 89999999 9999976421111 1 1111100
Q ss_pred hCCCCCceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChhhHHhh
Q 007438 384 VGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYLEYIKR 462 (604)
Q Consensus 384 ~g~~~~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~eYary 462 (604)
+. ..+++.+|.. .+.++.....+.+.+.++++||||+++|..+.+. +..+++.. .|+|.++|+++..|...
T Consensus 114 -~~-~~~~~~~~~~----~~~~~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~--~~~~ak~~~ip~V~~~h~~~~~~~~~ 185 (465)
T PLN02871 114 -GS-WSFPCPFYQK----VPLSLALSPRIISEVARFKPDLIHASSPGIMVFG--ALFYAKLLCVPLVMSYHTHVPVYIPR 185 (465)
T ss_pred -cc-CCcCCccCCC----ceeeccCCHHHHHHHHhCCCCEEEECCCchhHHH--HHHHHHHhCCCEEEEEecCchhhhhc
Confidence 00 0133334432 1222111225677788999999999998766655 33333333 49999999998887765
Q ss_pred hccchhHHHHHHHHHHHHHHhhCCceeeCchhhhhccC-------CcceeE-EeecCCCCCCCccchhhh-hh-ccCCCC
Q 007438 463 EKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK-------SVICNV-HGVNPKFLQIGEKVATDR-EQ-GQQAFS 532 (604)
Q Consensus 463 ~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k-------s~V~nV-hGVdp~fF~pg~r~a~rr-~~-g~~~~~ 532 (604)
+..+.+..++ ..+.+++.+ .||.||+.|...++... ..|..| .|||...|.+.......+ .. +..++.
T Consensus 186 ~~~~~~~~~~-~~~~r~~~~-~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~ 263 (465)
T PLN02871 186 YTFSWLVKPM-WDIIRFLHR-AADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEK 263 (465)
T ss_pred ccchhhHHHH-HHHHHHHHh-hCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCC
Confidence 5444444444 334466655 99999999998776321 122223 499988887754322222 22 223467
Q ss_pred ceEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCCcEEEcCCCCCCc
Q 007438 533 KGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHAD 599 (604)
Q Consensus 533 KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL~V~FtG~ldhad 599 (604)
++++|+|||..+||++.|+++++.+ ++++|+|+|+||++++|++.+.+ .+|.|+|.+++.+
T Consensus 264 ~~i~~vGrl~~~K~~~~li~a~~~~----~~~~l~ivG~G~~~~~l~~~~~~--~~V~f~G~v~~~e 324 (465)
T PLN02871 264 PLIVYVGRLGAEKNLDFLKRVMERL----PGARLAFVGDGPYREELEKMFAG--TPTVFTGMLQGDE 324 (465)
T ss_pred eEEEEeCCCchhhhHHHHHHHHHhC----CCcEEEEEeCChHHHHHHHHhcc--CCeEEeccCCHHH
Confidence 8899999999999999999988654 57999999999999999998874 4799999997643
No 5
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.87 E-value=1.1e-20 Score=194.34 Aligned_cols=268 Identities=12% Similarity=0.043 Sum_probs=170.9
Q ss_pred ceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEee--cCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCC
Q 007438 310 RNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVP--WLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFK 387 (604)
Q Consensus 310 r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vP--Wl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~ 387 (604)
|+|+|||..|.|-..|+..-..--|.+|.+.|| +|++++| +++......-|++..... + ..
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~-~V~vit~~~~~~~~~~~~~~~~~~~~~---------~-------~~ 63 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGH-EVRVITAPPYYPQWRVGEGYSAWRYRR---------E-------SE 63 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCCC-eEEEEecCCCCCCCCCCccccccccee---------e-------ec
Confidence 899999999999999998555555699999999 9999995 454322211111100000 0 01
Q ss_pred CCceeeccCCcccccccC---ccC-----C---ccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCC-cEEEEEEcC
Q 007438 388 ADFKISFYPGKFSKERRS---IIP-----A---GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTN 455 (604)
Q Consensus 388 ~~~~i~fYPgry~a~~~S---I~p-----~---gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyHTN 455 (604)
..+++..+|-.....+.. ++. . ..+.+.+. +++||||+++|..++... +...+++.+ |+|..+|..
T Consensus 64 ~~i~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Div~~~~p~~~~~~~-~~~~~~~~~~~~v~~~~d~ 141 (412)
T PRK10307 64 GGVTVWRCPLYVPKQPSGLKRLLHLGSFALSSFFPLLAQRR-WRPDRVIGVVPTLFCAPG-ARLLARLSGARTWLHIQDY 141 (412)
T ss_pred CCeEEEEccccCCCCccHHHHHHHHHHHHHHHHHHHhhccC-CCCCEEEEeCCcHHHHHH-HHHHHHhhCCCEEEEeccC
Confidence 123333332111111110 000 0 11122233 789999999998765442 222333333 878777765
Q ss_pred hhhHHhhhc--cchhHHHHHHHHHHHHHHhhCCceeeCchhhhhccC------CcceeE-EeecCCCCCCCcc---chhh
Q 007438 456 YLEYIKREK--NGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK------SVICNV-HGVNPKFLQIGEK---VATD 523 (604)
Q Consensus 456 Y~eYary~~--~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k------s~V~nV-hGVdp~fF~pg~r---~a~r 523 (604)
+.+.....+ .+.....+.+++.+++.+ .+|.||+.|+..++..+ ..+..| .||+++.|.+... ...+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ad~ii~~S~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~ 220 (412)
T PRK10307 142 EVDAAFGLGLLKGGKVARLATAFERSLLR-RFDNVSTISRSMMNKAREKGVAAEKVIFFPNWSEVARFQPVADADVDALR 220 (412)
T ss_pred CHHHHHHhCCccCcHHHHHHHHHHHHHHh-hCCEEEecCHHHHHHHHHcCCCcccEEEECCCcCHhhcCCCCccchHHHH
Confidence 544332111 112223345556666666 89999999998877432 123333 4999877766432 1234
Q ss_pred hhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC-cEEEcCCCCCC
Q 007438 524 REQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL-NLNFQKGRDHA 598 (604)
Q Consensus 524 r~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL-~V~FtG~ldha 598 (604)
.+.+.+++..+++|+|++..+||++.|+++++.+.. .++++|+|+|+|++++++++.++++++ +|.|+|++++.
T Consensus 221 ~~~~~~~~~~~i~~~G~l~~~kg~~~li~a~~~l~~-~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~ 295 (412)
T PRK10307 221 AQLGLPDGKKIVLYSGNIGEKQGLELVIDAARRLRD-RPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYD 295 (412)
T ss_pred HHcCCCCCCEEEEEcCccccccCHHHHHHHHHHhcc-CCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHH
Confidence 456666677899999999999999999999988754 468999999999999999999998888 89999998754
No 6
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.84 E-value=1.2e-19 Score=174.78 Aligned_cols=252 Identities=19% Similarity=0.228 Sum_probs=172.9
Q ss_pred eEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCc
Q 007438 311 NVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADF 390 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~ 390 (604)
||+|||.++.|..+|+..-...-|.+|++.|| +|+++.+.......... +..++.. +
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~-~v~~~~~~~~~~~~~~~-~~~~~~~---------------------~ 57 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGH-EVLVIAPGPFRESEGPA-RVVPVPS---------------------V 57 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCC-EEEEEeCCchhhccCCC-Cceeecc---------------------c
Confidence 69999999999999999444445599999999 99999876543221100 1122222 2
Q ss_pred eeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCC-cEEEEEEcChhhHHhhhccchhH
Q 007438 391 KISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQ 469 (604)
Q Consensus 391 ~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyHTNY~eYary~~~G~l~ 469 (604)
+...|+.. ...+.....+.+.+.+.+||+||+.+|..+++. +..+.++.+ |+|..+|+.+..|..........
T Consensus 58 ~~~~~~~~----~~~~~~~~~~~~~~~~~~pdii~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 131 (364)
T cd03814 58 PLPGYPEI----RLALPPRRRVRRLLDAFAPDVVHIATPGPLGLA--ALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLS 131 (364)
T ss_pred ccCcccce----EecccchhhHHHHHHhcCCCEEEEeccchhhHH--HHHHHHHcCCCEEEEEecChHHHhhhcccchHh
Confidence 22223221 112222344666678899999999999888877 444444434 99999999999887754433332
Q ss_pred HHHHHHHHHHHHHhhCCceeeCchhhhhcc-CCcceeE----EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccc
Q 007438 470 AFFVKHINNWVTRAYCDKVLRLSAATQDLP-KSVICNV----HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWA 544 (604)
Q Consensus 470 aplvR~~~r~~~r~yCdkVI~LS~avq~l~-ks~V~nV----hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwE 544 (604)
. ..+.+.+++.+ .||.||+.|....+.. +.+..++ .||+...|.+.......++.....+.+.++|+|++...
T Consensus 132 ~-~~~~~~~~~~~-~~d~i~~~s~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~ 209 (364)
T cd03814 132 W-LAWAYLRWFHN-RADRVLVPSPSLADELRARGFRRVRLWPRGVDTELFHPRRRDEALRARLGPPDRPVLLYVGRLAPE 209 (364)
T ss_pred H-hhHHHHHHHHH-hCCEEEeCCHHHHHHHhccCCCceeecCCCccccccCcccccHHHHHHhCCCCCeEEEEEeccccc
Confidence 2 22445566666 8999999999888733 2223333 38888888765433222222224456789999999999
Q ss_pred cCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCCcEEEcCCCCCC
Q 007438 545 KGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHA 598 (604)
Q Consensus 545 KGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL~V~FtG~ldha 598 (604)
||++.++++++.+... ++++|.|+|+|++.+.++ .+.-+|.|+|..+..
T Consensus 210 k~~~~~i~~~~~l~~~-~~~~l~i~G~~~~~~~~~----~~~~~v~~~g~~~~~ 258 (364)
T cd03814 210 KNLEALLDADLPLRRR-PPVRLVIVGDGPARARLE----ARYPNVHFLGFLDGE 258 (364)
T ss_pred cCHHHHHHHHHHhhhc-CCceEEEEeCCchHHHHh----ccCCcEEEEeccCHH
Confidence 9999999999998777 789999999999999887 223389999987644
No 7
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.82 E-value=3.5e-19 Score=183.14 Aligned_cols=246 Identities=10% Similarity=0.116 Sum_probs=163.5
Q ss_pred eEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCc
Q 007438 311 NVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADF 390 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~ 390 (604)
+|++||+.+.|+.-|+..-.+--|.+|++.|| +|+++.|..+..... .+.+ ..+
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G~-~V~v~~~~~~~~~~~------~~~~-------------------~~i 54 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRGH-KVVVITHAYGNRVGI------RYLT-------------------NGL 54 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHcCC-eeEEEeccCCcCCCc------cccc-------------------Cce
Confidence 59999999999999988555555699999999 999998865321110 0000 001
Q ss_pred eeeccCCccc----ccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCC-cEEEEEEcChhhHHhhhcc
Q 007438 391 KISFYPGKFS----KERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKN 465 (604)
Q Consensus 391 ~i~fYPgry~----a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyHTNY~eYary~~~ 465 (604)
++...|-... .......-+..+.+++.+++|||||++++... +...+..+.+..+ |+|.+.|+.+. +..
T Consensus 55 ~v~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~DiIh~~~~~~~-~~~~~~~~~~~~~~~~v~t~h~~~~-~~~---- 128 (398)
T cd03796 55 KVYYLPFVVFYNQSTLPTFFGTFPLLRNILIRERITIVHGHQAFSA-LAHEALLHARTMGLKTVFTDHSLFG-FAD---- 128 (398)
T ss_pred eEEEecceeccCCccccchhhhHHHHHHHHHhcCCCEEEECCCCch-HHHHHHHHhhhcCCcEEEEeccccc-ccc----
Confidence 2211111000 00000111234666788899999999997433 1111222334433 88999998652 110
Q ss_pred chhHHHHHHHHHHHHHHhhCCceeeCchhhhhcc-------CCcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEE
Q 007438 466 GALQAFFVKHINNWVTRAYCDKVLRLSAATQDLP-------KSVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYF 537 (604)
Q Consensus 466 G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~-------ks~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLF 537 (604)
.......++.+++++ .||.||++|...++.. ...+..| +|||+..|.+.... ..++..+++|
T Consensus 129 --~~~~~~~~~~~~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~-------~~~~~~~i~~ 198 (398)
T cd03796 129 --ASSIHTNKLLRFSLA-DVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK-------RDNDKITIVV 198 (398)
T ss_pred --hhhHHhhHHHHHhhc-cCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc-------CCCCceEEEE
Confidence 111123344455555 8999999999876521 1222333 49998877664321 1346678999
Q ss_pred EeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCCC
Q 007438 538 LGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDHA 598 (604)
Q Consensus 538 VGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldha 598 (604)
+||+..+||++.|+++++.+.+..++++|.|+|+||..+.+++.+.++++ .|+|+|..++.
T Consensus 199 ~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~ 261 (398)
T cd03796 199 ISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHE 261 (398)
T ss_pred EeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHH
Confidence 99999999999999999988888889999999999999999999999998 69999998654
No 8
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.74 E-value=3.6e-17 Score=162.15 Aligned_cols=252 Identities=16% Similarity=0.144 Sum_probs=158.2
Q ss_pred ceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCC
Q 007438 310 RNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKAD 389 (604)
Q Consensus 310 r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~ 389 (604)
|+|++++ .|...|+..--+-=|.+|++.|| +|+++..--+. ......+++.+..
T Consensus 1 mki~~~~---~p~~gG~~~~~~~la~~L~~~G~-~v~v~~~~~~~-~~~~~~~~~~~~~--------------------- 54 (371)
T cd04962 1 MKIGIVC---YPTYGGSGVVATELGKALARRGH-EVHFITSSRPF-RLDEYSPNIFFHE--------------------- 54 (371)
T ss_pred CceeEEE---EeCCCCccchHHHHHHHHHhcCC-ceEEEecCCCc-chhhhccCeEEEE---------------------
Confidence 7999998 48889998444455699999999 99998643211 0000112222221
Q ss_pred ceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcc-hhhhhcC-CCcEEEEEEcChhhHHhhhccch
Q 007438 390 FKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHH-GKRWTDK-FNHVVGVVHTNYLEYIKREKNGA 467 (604)
Q Consensus 390 ~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~-Garwt~K-f~PVVgiyHTNY~eYary~~~G~ 467 (604)
+++..+|-+.. ....+.....+.+.+.+.+|||+|++.+....+... ......+ -.|+|.++|-....+.. ..
T Consensus 55 ~~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~---~~- 129 (371)
T cd04962 55 VEVPQYPLFQY-PPYDLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITLVG---QD- 129 (371)
T ss_pred ecccccchhhc-chhHHHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCcccccc---cc-
Confidence 11111111110 001112234567778899999999986532111111 1112221 24889899954321111 11
Q ss_pred hHHHHHHHHHHHHHHhhCCceeeCchhhhhcc------CCcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEec
Q 007438 468 LQAFFVKHINNWVTRAYCDKVLRLSAATQDLP------KSVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGK 540 (604)
Q Consensus 468 l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~------ks~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGR 540 (604)
+..+.+.+.+.+ .||+||+.|...++.. ...+..| .|+++..|.+......+.+.+..++.++++|+||
T Consensus 130 ---~~~~~~~~~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~ 205 (371)
T cd04962 130 ---PSFQPATRFSIE-KSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDEALKRRLGAPEGEKVLIHISN 205 (371)
T ss_pred ---ccchHHHHHHHh-hCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchHHHHHhcCCCCCCeEEEEecc
Confidence 112233344444 8999999999877632 1223333 3888777766544433445566667889999999
Q ss_pred cccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCC
Q 007438 541 MVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDH 597 (604)
Q Consensus 541 LvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldh 597 (604)
+..+||++.|++++..+... .+++|+|+|+|++.+.+++.+.++++ .|.|+|..+.
T Consensus 206 l~~~K~~~~li~a~~~l~~~-~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~ 263 (371)
T cd04962 206 FRPVKRIDDVIRIFAKVRKE-VPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDH 263 (371)
T ss_pred cccccCHHHHHHHHHHHHhc-CCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCccc
Confidence 99999999999999888665 45899999999999999999999988 6999998754
No 9
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.74 E-value=6e-17 Score=154.98 Aligned_cols=265 Identities=16% Similarity=0.144 Sum_probs=171.1
Q ss_pred eEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCc
Q 007438 311 NVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADF 390 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~ 390 (604)
+|.|+|+.+.|..+|...-...-|.+|++.|+ +|+++++...........+ ..+. ....+
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~-~v~~~~~~~~~~~~~~~~~-~~~~------------------~~~~~ 60 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGH-EVTVITGSPNYPSGKIYKG-YKRE------------------EVDGV 60 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCc-eEEEEecCCCccccccccc-ceEE------------------ecCCe
Confidence 58999999999889999555666699999999 9999987654333321000 0000 00112
Q ss_pred eeeccCCcccccc---cCc-----cCCccccccC--CCCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChhhH
Q 007438 391 KISFYPGKFSKER---RSI-----IPAGDTSQFI--PSKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYLEY 459 (604)
Q Consensus 391 ~i~fYPgry~a~~---~SI-----~p~gdI~r~L--~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~eY 459 (604)
++..+|....... ..| +... ....+ ...++|+||++.|..+..+. +...+++. .|+|.+.|..|.++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~~h~~~~~~ 138 (394)
T cd03794 61 RVHRVPLPPYKKNGLLKRLLNYLSFALS-ALLALLKRRRRPDVIIATSPPLLIALA-ALLLARLKGAPFVLEVRDLWPES 138 (394)
T ss_pred EEEEEecCCCCccchHHHHHhhhHHHHH-HHHHHHhcccCCCEEEEcCChHHHHHH-HHHHHHhcCCCEEEEehhhcchh
Confidence 2222221111100 000 1111 11112 47889999999965555542 33333332 48899999887655
Q ss_pred Hhhhcc---chhHHHHHHHHHHHHHHhhCCceeeCchhhhhccC------CcceeE-EeecCCCCCCCccchhhhhhccC
Q 007438 460 IKREKN---GALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK------SVICNV-HGVNPKFLQIGEKVATDREQGQQ 529 (604)
Q Consensus 460 ary~~~---G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k------s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~ 529 (604)
...... .......++++.+++.. .||.||+.|+...+... ..+..| +||++..+.+......+......
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 217 (394)
T cd03794 139 AVALGLLKNGSLLYRLLRKLERLIYR-RADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKPPPADESLRKELGL 217 (394)
T ss_pred HHHccCccccchHHHHHHHHHHHHHh-cCCEEEEECHHHHHHHHhcCCCcCceEEcCCCCCHHHcCCccchhhhhhccCC
Confidence 443221 22222456667677766 99999999998877432 222223 48887777664432222333445
Q ss_pred CCCceEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC-cEEEcCCCCCCc
Q 007438 530 AFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL-NLNFQKGRDHAD 599 (604)
Q Consensus 530 ~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL-~V~FtG~ldhad 599 (604)
....+++|+|++...||++.|++++..+... ++++|.|+|+|++.+.+++.+...++ ++.|+|..++.+
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~-~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 287 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDR-PDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEE 287 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhc-CCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHH
Confidence 5678899999999999999999999988776 78999999999999999998777777 899999886543
No 10
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.73 E-value=4.5e-17 Score=166.01 Aligned_cols=262 Identities=17% Similarity=0.125 Sum_probs=161.0
Q ss_pred EEEEecCCCCcc-------cchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcc--cccCCceeCChhHHHHHHHHHHHH
Q 007438 312 VAIVTTASLPWM-------TGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQE--LVYPNVTFCSPEEQENYMRNWLEE 382 (604)
Q Consensus 312 IaIfTTAsLPWm-------TGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe--~vypn~rF~SpeeQe~~ir~wl~~ 382 (604)
|+.+|+...||. -|+..-.+--|.+|.+.|| +|+++.++....+.+ .+++++++--
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~-~V~v~~~~~~~~~~~~~~~~~~~~v~~-------------- 65 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGI-EVDIFTRATRPSQPPVVEVAPGVRVRN-------------- 65 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCC-EEEEEecccCCCCCCccccCCCcEEEE--------------
Confidence 689999999999 4555444444599999999 999999876432221 1122321111
Q ss_pred HhCCCCCceeeccCCcc-cccccCc--cCCccccccCC--CCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcCh
Q 007438 383 RVGFKADFKISFYPGKF-SKERRSI--IPAGDTSQFIP--SKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNY 456 (604)
Q Consensus 383 r~g~~~~~~i~fYPgry-~a~~~SI--~p~gdI~r~L~--~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY 456 (604)
++..-|.+.. ...+..+ +...-+..++. ..++||||.+... .++. +...++.. .|+|.++|+.+
T Consensus 66 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~-~~~~--~~~~~~~~~~p~v~t~h~~~ 135 (405)
T TIGR03449 66 -------VVAGPYEGLDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWL-SGQV--GWLLRDRWGVPLVHTAHTLA 135 (405)
T ss_pred -------ecCCCcccCCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHH-HHHH--HHHHHHhcCCCEEEeccchH
Confidence 1111111100 0000000 00011223333 2479999999832 2333 22222333 38999999876
Q ss_pred hhHHhhhccch-hHHHHHHHHHHHHHHhhCCceeeCchhhhh-ccC------CcceeE-EeecCCCCCCCccchhhhhhc
Q 007438 457 LEYIKREKNGA-LQAFFVKHINNWVTRAYCDKVLRLSAATQD-LPK------SVICNV-HGVNPKFLQIGEKVATDREQG 527 (604)
Q Consensus 457 ~eYary~~~G~-l~aplvR~~~r~~~r~yCdkVI~LS~avq~-l~k------s~V~nV-hGVdp~fF~pg~r~a~rr~~g 527 (604)
.-...+...+. ......+.+.+.+.+ .||.||+.|....+ +.. ..+..| .||+...|.+.++...+.+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~ 214 (405)
T TIGR03449 136 AVKNAALADGDTPEPEARRIGEQQLVD-NADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATERARLG 214 (405)
T ss_pred HHHHHhccCCCCCchHHHHHHHHHHHH-hcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHHHHHHhcC
Confidence 32222111111 111123333344445 89999999986444 221 122233 499988887765544555666
Q ss_pred cCCCCceEEEEeccccccCHHHHHHHHHHhhccCCC--cEEEEEec----C-CCHHHHHHHHHhcCC--cEEEcCCCCCC
Q 007438 528 QQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDG--FKLDVFGN----G-EDAYEVQSAAKRLDL--NLNFQKGRDHA 598 (604)
Q Consensus 528 ~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~--~kLdIVGD----G-PDreeLk~~a~~LgL--~V~FtG~ldha 598 (604)
.+++.++++|+||+...||++.|+++++++.+..++ ++|.|+|+ | ++.+++++.+.++++ +|+|+|..++.
T Consensus 215 ~~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~ 294 (405)
T TIGR03449 215 LPLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPE 294 (405)
T ss_pred CCCCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHH
Confidence 666788999999999999999999999988766665 89999996 5 678899999999998 69999998765
Q ss_pred c
Q 007438 599 D 599 (604)
Q Consensus 599 d 599 (604)
+
T Consensus 295 ~ 295 (405)
T TIGR03449 295 E 295 (405)
T ss_pred H
Confidence 3
No 11
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.71 E-value=4.4e-16 Score=146.52 Aligned_cols=257 Identities=20% Similarity=0.144 Sum_probs=171.7
Q ss_pred eEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCC-ceeCChhHHHHHHHHHHHHHhCCCCC
Q 007438 311 NVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKAD 389 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn-~rF~SpeeQe~~ir~wl~~r~g~~~~ 389 (604)
+|+|+|+.+.|+.+|...-..--|.+|.+.|+ +|+++.+............. .....
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~g~-~v~i~~~~~~~~~~~~~~~~~~~~~~--------------------- 58 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAARGH-EVTVLTPGDGGLPDEEEVGGIVVVRP--------------------- 58 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhcCc-eEEEEecCCCCCCceeeecCcceecC---------------------
Confidence 69999999999988888555555599999999 99999887643222110000 00000
Q ss_pred ceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhH
Q 007438 390 FKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQ 469 (604)
Q Consensus 390 ~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~ 469 (604)
..................+..++...++|++|+..+....+.. ......-.|+|.++|..+..+.... ....
T Consensus 59 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~--~~~~~~~~~~i~~~h~~~~~~~~~~--~~~~ 130 (374)
T cd03801 59 ----PPLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAA--LAARLLGIPLVLTVHGLEFGRPGNE--LGLL 130 (374)
T ss_pred ----CcccccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHH--HHHHhcCCcEEEEeccchhhccccc--hhHH
Confidence 0000011111111222345666888899999999987776653 1222221489999998886544321 1222
Q ss_pred HHHHHHHHHHHHHhhCCceeeCchhhhhccC-------CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEecc
Q 007438 470 AFFVKHINNWVTRAYCDKVLRLSAATQDLPK-------SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKM 541 (604)
Q Consensus 470 aplvR~~~r~~~r~yCdkVI~LS~avq~l~k-------s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRL 541 (604)
......+.+.+.. .+|.+|+.|....+... ..+..| +|+++..+.+.. ...............++|+|++
T Consensus 131 ~~~~~~~~~~~~~-~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~g~~ 208 (374)
T cd03801 131 LKLARALERRALR-RADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAP-RAARRRLGIPEDEPVILFVGRL 208 (374)
T ss_pred HHHHHHHHHHHHH-hCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccc-hHHHhhcCCcCCCeEEEEecch
Confidence 2244445555555 99999999998777432 123333 488887776543 2222233345567889999999
Q ss_pred ccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCCCc
Q 007438 542 VWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDHAD 599 (604)
Q Consensus 542 vwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldhad 599 (604)
...||++.+++++..+....++++|.|+|+|++.+.+++.+.++++ .|.|+|.+++.+
T Consensus 209 ~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 268 (374)
T cd03801 209 VPRKGVDLLLEALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDED 268 (374)
T ss_pred hhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhh
Confidence 9999999999999998887788999999999999999999888777 899999997543
No 12
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.70 E-value=1.6e-15 Score=143.28 Aligned_cols=235 Identities=18% Similarity=0.122 Sum_probs=157.2
Q ss_pred eEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCc
Q 007438 311 NVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADF 390 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~ 390 (604)
+|+|++....| ..|+..--+.-|.+|.+.|+ +|+++.+.........+.+++.... +
T Consensus 1 kI~i~~~~~~~-~gG~~~~~~~l~~~L~~~g~-~v~v~~~~~~~~~~~~~~~~~~~~~---------------------~ 57 (348)
T cd03820 1 KILFVIPSLGN-AGGAERVLSNLANALAEKGH-EVTIISLDKGEPPFYELDPKIKVID---------------------L 57 (348)
T ss_pred CeEEEeccccC-CCChHHHHHHHHHHHHhCCC-eEEEEecCCCCCCccccCCccceee---------------------c
Confidence 58999998888 88888444444599999999 9999977654301111111211111 0
Q ss_pred eeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHH
Q 007438 391 KISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQA 470 (604)
Q Consensus 391 ~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~a 470 (604)
+. ++. ......+.....+.+++.+.++|++|...+..+.+ -+.+..+..|+|.+.|..+..+...
T Consensus 58 ~~--~~~--~~~~~~~~~~~~~~~~l~~~~~d~i~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~-------- 122 (348)
T cd03820 58 GD--KRD--SKLLARFKKLRRLRKLLKNNKPDVVISFLTSLLTF---LASLGLKIVKLIVSEHNSPDAYKKR-------- 122 (348)
T ss_pred cc--ccc--cchhccccchHHHHHhhcccCCCEEEEcCchHHHH---HHHHhhccccEEEecCCCccchhhh--------
Confidence 00 000 01112223345677779999999999999872222 2233333258899999988654431
Q ss_pred HHHHHHHHHHHHhhCCceeeCchhhhh-ccCCcceeE----EeecCCCCCCCccchhhhhhccCCCCceEEEEecccccc
Q 007438 471 FFVKHINNWVTRAYCDKVLRLSAATQD-LPKSVICNV----HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAK 545 (604)
Q Consensus 471 plvR~~~r~~~r~yCdkVI~LS~avq~-l~ks~V~nV----hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEK 545 (604)
.....+.+++.+ .||.||+.|...+. .....-.++ .||+...+.+. .....+.++|+|++...|
T Consensus 123 ~~~~~~~~~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~----------~~~~~~~i~~~g~~~~~K 191 (348)
T cd03820 123 LRRLLLRRLLYR-RADAVVVLTEEDRALYYKKFNKNVVVIPNPLPFPPEEPS----------SDLKSKRILAVGRLVPQK 191 (348)
T ss_pred hHHHHHHHHHHh-cCCEEEEeCHHHHHHhhccCCCCeEEecCCcChhhcccc----------CCCCCcEEEEEEeecccc
Confidence 011113455555 99999999998842 222222333 36665544332 134567899999999999
Q ss_pred CHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCC
Q 007438 546 GYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKG 594 (604)
Q Consensus 546 GfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ 594 (604)
|++.|+++++.+.+..++++|+|+|+|++++.+++.+.++++ .+.|+|.
T Consensus 192 ~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~ 242 (348)
T cd03820 192 GFDLLIEAWAKIAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGF 242 (348)
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCC
Confidence 999999999999877889999999999999999999999888 7899997
No 13
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.69 E-value=1.2e-15 Score=148.99 Aligned_cols=244 Identities=18% Similarity=0.114 Sum_probs=156.7
Q ss_pred eEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCc
Q 007438 311 NVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADF 390 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~ 390 (604)
+|.++++.|.|...|+..-...-|.+|.+.|+ +|+++++--.....+..+.+ .
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g~-~v~v~~~~~~~~~~~~~~~~--------------------------~ 53 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARGI-EVAVLCASPEPKGRDEERNG--------------------------H 53 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhCCC-ceEEEecCCCCcchhhhccC--------------------------c
Confidence 58999999999988888555555699999999 99998653211111110111 1
Q ss_pred eeeccCC--cccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchh
Q 007438 391 KISFYPG--KFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGAL 468 (604)
Q Consensus 391 ~i~fYPg--ry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l 468 (604)
++...+. ........ ....... .+...++||+|++.|..++.+. ..+..+-.++|.++|.+..... .
T Consensus 54 ~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~Dii~~~~~~~~~~~~--~~~~~~~~~~i~~~h~~~~~~~-------~ 122 (357)
T cd03795 54 RVIRAPSLLNVASTPFS-PSFFKQL-KKLAKKADVIHLHFPNPLADLA--LLLLPRKKPVVVHWHSDIVKQK-------L 122 (357)
T ss_pred eEEEeeccccccccccc-HHHHHHH-HhcCCCCCEEEEecCcchHHHH--HHHhccCceEEEEEcChhhccc-------h
Confidence 1111111 00000000 0000000 1457789999999987765552 2222222478999997653111 1
Q ss_pred HHHHHHHHHHHHHHhhCCceeeCchhhhhcc----C--CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEecc
Q 007438 469 QAFFVKHINNWVTRAYCDKVLRLSAATQDLP----K--SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKM 541 (604)
Q Consensus 469 ~aplvR~~~r~~~r~yCdkVI~LS~avq~l~----k--s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRL 541 (604)
.....+.+.+++.+ .||.||+.|....+.. . ..+..| .||+...|.+..... ........+...++|+||+
T Consensus 123 ~~~~~~~~~~~~~~-~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~-~~~~~~~~~~~~i~~~G~~ 200 (357)
T cd03795 123 LLKLYRPLQRRFLR-RADAIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALE-EAIWRRAAGRPFFLFVGRL 200 (357)
T ss_pred hhhhhhHHHHHHHH-hcCEEEeCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhh-hHhhcCCCCCcEEEEeccc
Confidence 12234456666666 8999999998776621 1 222223 588887776644221 1122334567899999999
Q ss_pred ccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCCC
Q 007438 542 VWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDHA 598 (604)
Q Consensus 542 vwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldha 598 (604)
...||++.|+++++++. +++|+|+|+|++...+++.+.++++ +|.|+|.+++.
T Consensus 201 ~~~K~~~~li~a~~~l~----~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~ 255 (357)
T cd03795 201 VYYKGLDVLLEAAAALP----DAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDE 255 (357)
T ss_pred ccccCHHHHHHHHHhcc----CcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHH
Confidence 99999999999998875 7999999999999999999988877 89999999854
No 14
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.68 E-value=6.6e-16 Score=161.75 Aligned_cols=259 Identities=14% Similarity=0.051 Sum_probs=152.2
Q ss_pred CCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcc-cccCCceeCChhHHHHHHHHHHHHHhCC
Q 007438 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQE-LVYPNVTFCSPEEQENYMRNWLEERVGF 386 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe-~vypn~rF~SpeeQe~~ir~wl~~r~g~ 386 (604)
++.+|.|+|++- -|++.-.+.-|..|++.|| +|+++.+--+....+ ....+
T Consensus 2 ~~~~~~~~~~~~----~~~~~R~~~~a~~L~~~G~-~V~ii~~~~~~~~~~~~~~~~----------------------- 53 (415)
T cd03816 2 KRKRVCVLVLGD----IGRSPRMQYHALSLAKHGW-KVDLVGYLETPPHDEILSNPN----------------------- 53 (415)
T ss_pred CccEEEEEEecc----cCCCHHHHHHHHHHHhcCc-eEEEEEecCCCCCHHHhcCCC-----------------------
Confidence 467999999964 5666444556799999999 999997532211111 11122
Q ss_pred CCCceeeccCCcc---cccccCccC-------Ccc-ccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEc
Q 007438 387 KADFKISFYPGKF---SKERRSIIP-------AGD-TSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHT 454 (604)
Q Consensus 387 ~~~~~i~fYPgry---~a~~~SI~p-------~gd-I~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHT 454 (604)
+.+..++.+. ...++.+.. .-. +...+...++||+|+++|..+.-...+..+++.. .|+|.+.|-
T Consensus 54 ---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~ 130 (415)
T cd03816 54 ---ITIHPLPPPPQRLNKLPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHN 130 (415)
T ss_pred ---EEEEECCCCccccccchHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCC
Confidence 2333332211 000000000 001 1112455689999999876542221132233322 488988885
Q ss_pred ChhhHHhhh-ccchhHHHHHHHHHHHHHHhhCCceeeCchhhhhccC------CcceeEEeecCCCCCCCccchhhhh--
Q 007438 455 NYLEYIKRE-KNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK------SVICNVHGVNPKFLQIGEKVATDRE-- 525 (604)
Q Consensus 455 NY~eYary~-~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k------s~V~nVhGVdp~fF~pg~r~a~rr~-- 525 (604)
.+..+.... +.......+.+++.+++.+ +||+||+.|...++... ..|..|+..+...|.|.........
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~ad~ii~vS~~~~~~l~~~~~~~~ki~vI~Ng~~~~f~p~~~~~~~~~~~ 209 (415)
T cd03816 131 YGYTILALKLGENHPLVRLAKWYEKLFGR-LADYNLCVTKAMKEDLQQFNNWKIRATVLYDRPPEQFRPLPLEEKHELFL 209 (415)
T ss_pred chHHHHhcccCCCCHHHHHHHHHHHHHhh-cCCEeeecCHHHHHHHHhhhccCCCeeecCCCCHHHceeCcHHHHHHHHH
Confidence 432232211 1111223356667677766 89999999998877432 2333333223344444322111111
Q ss_pred ---------------hc-cCCCCceEEEEeccccccCHHHHHHHHHHhhc------cCCCcEEEEEecCCCHHHHHHHHH
Q 007438 526 ---------------QG-QQAFSKGAYFLGKMVWAKGYRELIDLLAKHKN------DLDGFKLDVFGNGEDAYEVQSAAK 583 (604)
Q Consensus 526 ---------------~g-~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~------~~~~~kLdIVGDGPDreeLk~~a~ 583 (604)
.+ .++...+++++|||..+||++.||++++.+.+ ..++++|.|+|+||++++|++.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~ 289 (415)
T cd03816 210 KLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIK 289 (415)
T ss_pred hccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHHHH
Confidence 01 12345688899999999999999999988764 236799999999999999999999
Q ss_pred hcCC-cEEEc-CCCCCC
Q 007438 584 RLDL-NLNFQ-KGRDHA 598 (604)
Q Consensus 584 ~LgL-~V~Ft-G~ldha 598 (604)
++++ +++|. |.+++.
T Consensus 290 ~~~l~~~~~~~g~~~~~ 306 (415)
T cd03816 290 ELKLKKVTIRTPWLSAE 306 (415)
T ss_pred HcCCCcEEEEcCcCCHH
Confidence 9999 67765 566543
No 15
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.66 E-value=5.6e-15 Score=150.03 Aligned_cols=243 Identities=11% Similarity=0.050 Sum_probs=144.3
Q ss_pred eEEEEecCCCCcccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCC
Q 007438 311 NVAIVTTASLPWMTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKA 388 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~ 388 (604)
+|++|++++ ..-|++ +..|. .+|.+.|| +|++++|.-. ++ + |..++ +..++ -.|.+-
T Consensus 1 ki~~~~~~~--~~GGv~~~~~~l~--~~l~~~g~-~v~~~~~~~~---~~-~-----~~~~~-~~~~~------~~g~~~ 59 (372)
T cd03792 1 KVLHVNSTP--YGGGVAEILHSLV--PLMRDLGV-DTRWEVIKGD---PE-F-----FNVTK-KFHNA------LQGADI 59 (372)
T ss_pred CeEEEeCCC--CCCcHHHHHHHHH--HHHHHcCC-CceEEecCCC---hh-H-----HHHHH-HhhHh------hcCCCC
Confidence 589999885 568888 77777 89999999 9999988531 11 0 11000 00000 001111
Q ss_pred CceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchh
Q 007438 389 DFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGAL 468 (604)
Q Consensus 389 ~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l 468 (604)
.++.. ++-.|...... -+.+.+...++||+|+++|..+++ ...+..+-.|+|.++|+++..+..
T Consensus 60 ~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~Dvv~~h~~~~~~~---~~~~~~~~~~~i~~~H~~~~~~~~------- 123 (372)
T cd03792 60 ELSEE-EKEIYLEWNEE-----NAERPLLDLDADVVVIHDPQPLAL---PLFKKKRGRPWIWRCHIDLSSPNR------- 123 (372)
T ss_pred CCCHH-HHHHHHHHHHH-----HhccccccCCCCEEEECCCCchhH---HHhhhcCCCeEEEEeeeecCCCcH-------
Confidence 01000 01011110011 011135667899999999874332 233333225899999998864431
Q ss_pred HHHHHHHHHHHHHHhhCCceeeCchh-hhh-ccCCcceeE-EeecCCC-C----CCCccchhhhhhccCCCCceEEEEec
Q 007438 469 QAFFVKHINNWVTRAYCDKVLRLSAA-TQD-LPKSVICNV-HGVNPKF-L----QIGEKVATDREQGQQAFSKGAYFLGK 540 (604)
Q Consensus 469 ~aplvR~~~r~~~r~yCdkVI~LS~a-vq~-l~ks~V~nV-hGVdp~f-F----~pg~r~a~rr~~g~~~~~KvvLFVGR 540 (604)
..++++ +++.+ .||.+|..|.. ... +....+ .| .|||+.. + ++.+....+++.+..++.++++||||
T Consensus 124 --~~~~~~-~~~~~-~~d~~i~~~~~~~~~~~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgr 198 (372)
T cd03792 124 --RVWDFL-QPYIE-DYDAAVFHLPEYVPPQVPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKYGIDPERPYITQVSR 198 (372)
T ss_pred --HHHHHH-HHHHH-hCCEEeecHHHhcCCCCCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHhCCCCCCcEEEEEec
Confidence 234434 44444 68888877732 111 111222 22 4888642 2 22223334556677778899999999
Q ss_pred cccccCHHHHHHHHHHhhccCCCcEEEEEecCCCH----HH-HHHHHHhcCC--cEEEcCCC
Q 007438 541 MVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDA----YE-VQSAAKRLDL--NLNFQKGR 595 (604)
Q Consensus 541 LvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDr----ee-Lk~~a~~LgL--~V~FtG~l 595 (604)
|..+||++.|+++++.+.+..++++|+|+|+||.. .+ +++..+.+++ ++.|+|..
T Consensus 199 l~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 260 (372)
T cd03792 199 FDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLP 260 (372)
T ss_pred cccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecC
Confidence 99999999999999988777788999999999863 22 4444444555 78999876
No 16
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.65 E-value=2.9e-15 Score=145.85 Aligned_cols=226 Identities=16% Similarity=0.062 Sum_probs=151.9
Q ss_pred ceEEEEecCCCC----cccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhC
Q 007438 310 RNVAIVTTASLP----WMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVG 385 (604)
Q Consensus 310 r~IaIfTTAsLP----WmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g 385 (604)
|+|+++|+.+.| ...|+.....-=|.+|.+.|| +|+++.|......... .+......+
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~-~V~v~~~~~~~~~~~~-~~~~~~~~~---------------- 62 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGH-EVTLFASGDSKTAAPL-VPVVPEPLR---------------- 62 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCc-eEEEEecCCCCcccce-eeccCCCcc----------------
Confidence 899999999976 888887444444599999999 9999988765322211 000000000
Q ss_pred CCCCceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhcc
Q 007438 386 FKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKN 465 (604)
Q Consensus 386 ~~~~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~ 465 (604)
... +.... ..+.-...+.+++.+.++||+|.+++....+ .+...+ .|+|.++|..+..+...
T Consensus 63 ----~~~---~~~~~---~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~----~~~~~~-~~~v~~~h~~~~~~~~~--- 124 (335)
T cd03802 63 ----LDA---PGRDR---AEAEALALAERALAAGDFDIVHNHSLHLPLP----FARPLP-VPVVTTLHGPPDPELLK--- 124 (335)
T ss_pred ----ccc---chhhH---hhHHHHHHHHHHHhcCCCCEEEecCcccchh----hhcccC-CCEEEEecCCCCcccch---
Confidence 000 00000 1111223456678899999999999766544 112222 48899999888654431
Q ss_pred chhHHHHHHHHHHHHHHhhCCceeeCchhhhhccCC--cceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccc
Q 007438 466 GALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPKS--VICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMV 542 (604)
Q Consensus 466 G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~ks--~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLv 542 (604)
........+.+++.|......... .+..| .||++..|.+. +.....++|+||+.
T Consensus 125 ------------~~~~~~~~~~~~~~s~~~~~~~~~~~~~~vi~ngvd~~~~~~~-----------~~~~~~i~~~Gr~~ 181 (335)
T cd03802 125 ------------LYYAARPDVPFVSISDAQRRPWPPLPWVATVHNGIDLDDYPFR-----------GPKGDYLLFLGRIS 181 (335)
T ss_pred ------------HHHhhCcCCeEEEecHHHHhhcccccccEEecCCcChhhCCCC-----------CCCCCEEEEEEeec
Confidence 112234667889999987775432 33444 49998888752 12456799999999
Q ss_pred cccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcC---CcEEEcCCCCCCc
Q 007438 543 WAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLD---LNLNFQKGRDHAD 599 (604)
Q Consensus 543 wEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~Lg---L~V~FtG~ldhad 599 (604)
+.||.+.|+++.++ .+++|+|+|+|++.+.+........ -+|.|+|.+++.+
T Consensus 182 ~~Kg~~~li~~~~~-----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~ 236 (335)
T cd03802 182 PEKGPHLAIRAARR-----AGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAE 236 (335)
T ss_pred cccCHHHHHHHHHh-----cCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHH
Confidence 99999999998754 3689999999999988888776654 3899999998754
No 17
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.64 E-value=3.7e-15 Score=147.59 Aligned_cols=174 Identities=14% Similarity=0.085 Sum_probs=120.3
Q ss_pred ccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceeeC
Q 007438 412 TSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRL 491 (604)
Q Consensus 412 I~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~L 491 (604)
+.+++++++|||||.+.+. .++.....+...+ .|+|.++|.....+....... ......+.+.+.+++ .||.||+.
T Consensus 74 ~~~~~~~~~~dvvh~~~~~-~~~~~~~~~~~~~-~p~i~~~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~d~ii~~ 149 (367)
T cd05844 74 LRRLLRRHRPDLVHAHFGF-DGVYALPLARRLG-VPLVVTFHGFDATTSLALLLR-SRWALYARRRRRLAR-RAALFIAV 149 (367)
T ss_pred HHHHHHhhCCCEEEeccCc-hHHHHHHHHHHcC-CCEEEEEeCccccccchhhcc-cchhHHHHHHHHHHH-hcCEEEEC
Confidence 3345888999999998754 3444222222233 488999996432221111110 002223445455555 89999999
Q ss_pred chhhhhccC------CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCCCc
Q 007438 492 SAATQDLPK------SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGF 564 (604)
Q Consensus 492 S~avq~l~k------s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~ 564 (604)
|+..++... ..+..+ .||++..|.+... ......++|+|++.+.||++.|++++..+.+..+++
T Consensus 150 s~~~~~~~~~~~~~~~~i~vi~~g~d~~~~~~~~~---------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~ 220 (367)
T cd05844 150 SQFIRDRLLALGFPPEKVHVHPIGVDTAKFTPATP---------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEV 220 (367)
T ss_pred CHHHHHHHHHcCCCHHHeEEecCCCCHHhcCCCCC---------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCe
Confidence 998877432 122233 4888777765321 234578999999999999999999999988778899
Q ss_pred EEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCCC
Q 007438 565 KLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDHA 598 (604)
Q Consensus 565 kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldha 598 (604)
+|+|+|+|+..+++++.+.++++ ++.|+|.+++.
T Consensus 221 ~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 256 (367)
T cd05844 221 RLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHA 256 (367)
T ss_pred EEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHH
Confidence 99999999999999999999877 89999998654
No 18
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.64 E-value=2.5e-15 Score=159.14 Aligned_cols=275 Identities=17% Similarity=0.154 Sum_probs=156.5
Q ss_pred ceEEEEecCCCCc--ccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCC---ceeCCh-hHHHHHHHHHHH
Q 007438 310 RNVAIVTTASLPW--MTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN---VTFCSP-EEQENYMRNWLE 381 (604)
Q Consensus 310 r~IaIfTTAsLPW--mTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn---~rF~Sp-eeQe~~ir~wl~ 381 (604)
|+|.++|.=+.|| +-|.+ |.-|- ..|++.|| +|.+++|.|...+....-.- ..+..+ ..++.+++-|-.
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~--~aL~~~G~-~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALP--KALAALGH-DVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEG 77 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHH--HHHHHcCC-eEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEE
Confidence 8999999999999 56666 67776 88999999 99999999975322100000 000000 001111111110
Q ss_pred HHhCCCCCceeecc--C------C-cccc-----cccCccCCccccccC--CCCCCcEEEEcCcchhhhhcchhhhhcCC
Q 007438 382 ERVGFKADFKISFY--P------G-KFSK-----ERRSIIPAGDTSQFI--PSKDADIAILEEPEHLNWYHHGKRWTDKF 445 (604)
Q Consensus 382 ~r~g~~~~~~i~fY--P------g-ry~a-----~~~SI~p~gdI~r~L--~~f~pDVVHLeEPehLGwy~~Garwt~Kf 445 (604)
. .+++++.|- | + -|.. ..+.++-..-..+++ ..++|||+|.++ .|-+..+.......+.
T Consensus 78 ~----~~~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hd-w~~~~~~~~l~~~~~~ 152 (473)
T TIGR02095 78 V----VEGVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHD-WHTALVPALLKAVYRP 152 (473)
T ss_pred E----ECCceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECC-cHHHHHHHHHHhhccC
Confidence 0 011222211 0 0 1110 000000000111122 236899999999 4444442222222221
Q ss_pred --CcEEEEEEcChhhHHhhhc------cchhHHH----HHH-----HHHHHHHHhhCCceeeCchhhhh-ccC-------
Q 007438 446 --NHVVGVVHTNYLEYIKREK------NGALQAF----FVK-----HINNWVTRAYCDKVLRLSAATQD-LPK------- 500 (604)
Q Consensus 446 --~PVVgiyHTNY~eYary~~------~G~l~ap----lvR-----~~~r~~~r~yCdkVI~LS~avq~-l~k------- 500 (604)
.|+|.++|+.. |..+.+ .|.-... .+. .+.+..++ +||+||+.|....+ +..
T Consensus 153 ~~~~~v~TiH~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~ad~v~tVS~~~~~ei~~~~~~~~l 229 (473)
T TIGR02095 153 NPIKTVFTIHNLA--YQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIV-YADRVTTVSPTYAREILTPEFGYGL 229 (473)
T ss_pred CCCCEEEEcCCCc--cCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHH-hCCcCeecCHhHHHHhcCCcCCccc
Confidence 58999999754 211111 1110000 000 12244455 99999999986544 211
Q ss_pred --------CcceeE-EeecCCCCCCCcc-------------------chhhhhhccCC--CCceEEEEeccccccCHHHH
Q 007438 501 --------SVICNV-HGVNPKFLQIGEK-------------------VATDREQGQQA--FSKGAYFLGKMVWAKGYREL 550 (604)
Q Consensus 501 --------s~V~nV-hGVdp~fF~pg~r-------------------~a~rr~~g~~~--~~KvvLFVGRLvwEKGfD~L 550 (604)
..+..| .|||...|+|... ...+++.+.+. +.++++|||||.++||++.|
T Consensus 230 ~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~l 309 (473)
T TIGR02095 230 DGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLL 309 (473)
T ss_pred hhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHH
Confidence 123333 3999998887421 22344555544 67899999999999999999
Q ss_pred HHHHHHhhccCCCcEEEEEecCC--CHHHHHHHHHhcCCcEEEcCCCCC
Q 007438 551 IDLLAKHKNDLDGFKLDVFGNGE--DAYEVQSAAKRLDLNLNFQKGRDH 597 (604)
Q Consensus 551 Ldl~~~v~~~~~~~kLdIVGDGP--DreeLk~~a~~LgL~V~FtG~ldh 597 (604)
++++.++.+. +++|+|+|+|+ .++.+++.+.+++.++.|.+..+.
T Consensus 310 i~a~~~l~~~--~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~ 356 (473)
T TIGR02095 310 LAALPELLEL--GGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDE 356 (473)
T ss_pred HHHHHHHHHc--CcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCH
Confidence 9999888653 49999999995 567888888877767888877654
No 19
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.63 E-value=3.8e-15 Score=151.45 Aligned_cols=228 Identities=15% Similarity=0.207 Sum_probs=145.4
Q ss_pred ceEEEEecCCCCcccchhhhHHHHHHHHhhc--CCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCC
Q 007438 310 RNVAIVTTASLPWMTGTAVNPLFRAAYLAKT--EQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFK 387 (604)
Q Consensus 310 r~IaIfTTAsLPWmTGtAVnpL~RAayLak~--G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~ 387 (604)
|+|+++|+++ |-.-|+.-..+-=|.+|.+. |+ +|+++.|--+.. . .|+. ++++.
T Consensus 1 mkI~~~~~~~-~~~GG~e~~~~~l~~~L~~~~~g~-~v~v~~~~~~~~-~--------------------~~~~-~~~~~ 56 (359)
T PRK09922 1 MKIAFIGEAV-SGFGGMETVISNVINTFEESKINC-EMFFFCRNDKMD-K--------------------AWLK-EIKYA 56 (359)
T ss_pred CeeEEecccc-cCCCchhHHHHHHHHHhhhcCcce-eEEEEecCCCCC-h--------------------HHHH-hcchh
Confidence 8999998864 44488874445446999999 66 999987643211 0 1111 11111
Q ss_pred ---CCceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChhhHHhhh
Q 007438 388 ---ADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYLEYIKRE 463 (604)
Q Consensus 388 ---~~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~eYary~ 463 (604)
+..++.++.. +.. ...+.+.+.+++|||+|.++|.. .++...+....+. .+++.+.|+.+..+..+
T Consensus 57 ~~~~~~~~~~~~~-----~~~---~~~l~~~l~~~~~Dii~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~- 126 (359)
T PRK09922 57 QSFSNIKLSFLRR-----AKH---VYNFSKWLKETQPDIVICIDVIS-CLYANKARKKSGKQFKIFSWPHFSLDHKKHA- 126 (359)
T ss_pred cccccchhhhhcc-----cHH---HHHHHHHHHhcCCCEEEEcCHHH-HHHHHHHHHHhCCCCeEEEEecCcccccchh-
Confidence 0112221110 111 23466779999999999999643 4553333333232 36688888876432211
Q ss_pred ccchhHHHHHHHHHHHHHHhhCCceeeCchhhhhccC-Cc-----ceeE-EeecCCC-CCCCccchhhhhhccCCCCceE
Q 007438 464 KNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK-SV-----ICNV-HGVNPKF-LQIGEKVATDREQGQQAFSKGA 535 (604)
Q Consensus 464 ~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k-s~-----V~nV-hGVdp~f-F~pg~r~a~rr~~g~~~~~Kvv 535 (604)
..+.+ .+||++|+.|..+++... .+ +..| .||+... +.+..+ ..+.+++
T Consensus 127 --------~~~~~------~~~d~~i~~S~~~~~~~~~~~~~~~ki~vi~N~id~~~~~~~~~~---------~~~~~~i 183 (359)
T PRK09922 127 --------ECKKI------TCADYHLAISSGIKEQMMARGISAQRISVIYNPVEIKTIIIPPPE---------RDKPAVF 183 (359)
T ss_pred --------hhhhh------hcCCEEEEcCHHHHHHHHHcCCCHHHEEEEcCCCCHHHccCCCcc---------cCCCcEE
Confidence 01111 489999999998877432 11 2222 2777332 222111 2346789
Q ss_pred EEEeccccc--cCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCC
Q 007438 536 YFLGKMVWA--KGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDH 597 (604)
Q Consensus 536 LFVGRLvwE--KGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldh 597 (604)
+|+|||.++ ||++.|++++.++. ++++|+|+|+||+++++++.++++++ +|+|+|.++.
T Consensus 184 ~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~ 246 (359)
T PRK09922 184 LYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQ 246 (359)
T ss_pred EEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCC
Confidence 999999865 99999999997764 36899999999999999999999998 7999999865
No 20
>PLN02275 transferase, transferring glycosyl groups
Probab=99.63 E-value=1.4e-14 Score=149.40 Aligned_cols=177 Identities=11% Similarity=0.064 Sum_probs=117.7
Q ss_pred CCCCCCcEEEEcCcchhhhhcch--hhhhcCCCcEEEEEEcChhhHHh-hhccchhHHHHHHHHHHHHHHhhCCceeeCc
Q 007438 416 IPSKDADIAILEEPEHLNWYHHG--KRWTDKFNHVVGVVHTNYLEYIK-REKNGALQAFFVKHINNWVTRAYCDKVLRLS 492 (604)
Q Consensus 416 L~~f~pDVVHLeEPehLGwy~~G--arwt~Kf~PVVgiyHTNY~eYar-y~~~G~l~aplvR~~~r~~~r~yCdkVI~LS 492 (604)
++.+++||||+++|..+.....+ .++..+ .|+|.++|+....... ..........+.+++.+++.+ .||+||++|
T Consensus 96 ~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~-~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~ad~ii~~S 173 (371)
T PLN02275 96 VKIPRPDVFLVQNPPSVPTLAVVKLACWLRR-AKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGK-MADGHLCVT 173 (371)
T ss_pred hhCCCCCEEEEeCCCCcHHHHHHHHHHHHhC-CCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHh-hCCEEEECC
Confidence 45679999999987754432112 233334 4889899976421111 011122344467778777777 899999999
Q ss_pred hhhhhccC--Ccc--eeEEeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhh----------
Q 007438 493 AATQDLPK--SVI--CNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHK---------- 558 (604)
Q Consensus 493 ~avq~l~k--s~V--~nVhGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~---------- 558 (604)
+..++... .++ ..|.+.+...|.+..... ........+++++|||..+||++.|+++++.+.
T Consensus 174 ~~~~~~l~~~~g~~i~vi~n~~~~~f~~~~~~~----~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~ 249 (371)
T PLN02275 174 KAMQHELDQNWGIRATVLYDQPPEFFRPASLEI----RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNES 249 (371)
T ss_pred HHHHHHHHHhcCCCeEEECCCCHHHcCcCCchh----cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccc
Confidence 99877432 122 233332345555533211 111223457889999999999999999987763
Q ss_pred -------ccCCCcEEEEEecCCCHHHHHHHHHhcCC-cEEEcCC-CCCC
Q 007438 559 -------NDLDGFKLDVFGNGEDAYEVQSAAKRLDL-NLNFQKG-RDHA 598 (604)
Q Consensus 559 -------~~~~~~kLdIVGDGPDreeLk~~a~~LgL-~V~FtG~-ldha 598 (604)
...++++|+|+|+||++++|+++++++++ +++|+|. +++.
T Consensus 250 ~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~ 298 (371)
T PLN02275 250 DSASGKQSLYPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAE 298 (371)
T ss_pred cccccccccCCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHH
Confidence 23578999999999999999999999999 7888764 5543
No 21
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.62 E-value=4.4e-15 Score=158.04 Aligned_cols=270 Identities=13% Similarity=0.109 Sum_probs=151.2
Q ss_pred ceEEEEecCCCCc--ccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhC
Q 007438 310 RNVAIVTTASLPW--MTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVG 385 (604)
Q Consensus 310 r~IaIfTTAsLPW--mTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g 385 (604)
|+|+++|+-+.|+ +-|.+ |.-|- ..|++.|| +|.+++|++...... ++.... ..+ . .+.+=|.-. .
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~--~~L~~~G~-~V~v~~p~y~~~~~~--~~~~~~-~~~-~-~~~~~~~~~--~ 70 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALP--KALAALGH-DVRVLLPGYPAIREK--LRDAQV-VGR-L-DLFTVLFGH--L 70 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHH--HHHHHCCC-cEEEEecCCcchhhh--hcCceE-EEE-e-eeEEEEEEe--E
Confidence 8999999999999 55666 67776 89999999 999999999742211 011000 000 0 000000000 0
Q ss_pred CCCCceeecc-CCcccccccCccCCc-c----------ccccCC--CCCCcEEEEcCcchhhhhcchhh--hhcCC--Cc
Q 007438 386 FKADFKISFY-PGKFSKERRSIIPAG-D----------TSQFIP--SKDADIAILEEPEHLNWYHHGKR--WTDKF--NH 447 (604)
Q Consensus 386 ~~~~~~i~fY-Pgry~a~~~SI~p~g-d----------I~r~L~--~f~pDVVHLeEPehLGwy~~Gar--wt~Kf--~P 447 (604)
....+++.|- +..|.. +..++.-. + ..+++. ..+|||||.++ -|-++.+.... +...+ .|
T Consensus 71 ~~~gv~v~~v~~~~~~~-~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~-w~~~~~~~~l~~~~~~~~~~~~ 148 (466)
T PRK00654 71 EGDGVPVYLIDAPHLFD-RPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHD-WHTGLIPALLKEKYWRGYPDIK 148 (466)
T ss_pred EcCCceEEEEeCHHHcC-CCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECC-cHHHHHHHHHHHhhhccCCCCC
Confidence 0011221110 001100 00111100 0 111122 25899999998 44444422111 11112 49
Q ss_pred EEEEEEcChhh------HHhhhccch--hHHHHHH-----HHHHHHHHhhCCceeeCchhhhhccC--------------
Q 007438 448 VVGVVHTNYLE------YIKREKNGA--LQAFFVK-----HINNWVTRAYCDKVLRLSAATQDLPK-------------- 500 (604)
Q Consensus 448 VVgiyHTNY~e------Yary~~~G~--l~aplvR-----~~~r~~~r~yCdkVI~LS~avq~l~k-------------- 500 (604)
+|.|+|+.-.+ +....+... .....+. .+.+...+ +||+||+.|....+...
T Consensus 149 ~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~ 227 (466)
T PRK00654 149 TVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLY-YADRVTTVSPTYAREITTPEFGYGLEGLLRA 227 (466)
T ss_pred EEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHH-hcCcCeeeCHHHHHHhccccCCcChHHHHHh
Confidence 99999986311 011000000 0000011 12233444 99999999987654221
Q ss_pred --CcceeE-EeecCCCCCCCc-------------------cchhhhhhccCC-CCceEEEEeccccccCHHHHHHHHHHh
Q 007438 501 --SVICNV-HGVNPKFLQIGE-------------------KVATDREQGQQA-FSKGAYFLGKMVWAKGYRELIDLLAKH 557 (604)
Q Consensus 501 --s~V~nV-hGVdp~fF~pg~-------------------r~a~rr~~g~~~-~~KvvLFVGRLvwEKGfD~LLdl~~~v 557 (604)
..+..| .|||.+.|+|.. +...+++.+.++ +.++++|||||..+||++.|+++++++
T Consensus 228 ~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l 307 (466)
T PRK00654 228 RSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPEL 307 (466)
T ss_pred cccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHH
Confidence 123333 399999888742 123345556653 578999999999999999999999888
Q ss_pred hccCCCcEEEEEecCCC--HHHHHHHHHhcCCcEEE-cCC
Q 007438 558 KNDLDGFKLDVFGNGED--AYEVQSAAKRLDLNLNF-QKG 594 (604)
Q Consensus 558 ~~~~~~~kLdIVGDGPD--reeLk~~a~~LgL~V~F-tG~ 594 (604)
... +++|+|+|+|+. ++.+++++.+++.++.| .|.
T Consensus 308 ~~~--~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~ 345 (466)
T PRK00654 308 LEQ--GGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGY 345 (466)
T ss_pred Hhc--CCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeC
Confidence 653 789999999974 57899999988877765 454
No 22
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.62 E-value=4.9e-15 Score=145.49 Aligned_cols=246 Identities=16% Similarity=0.148 Sum_probs=152.9
Q ss_pred eEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCc
Q 007438 311 NVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADF 390 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~ 390 (604)
+|.++|+.. -..|+..-..-=|.+|++.|+ +|+++.+--... . +.. .+ ++.| +
T Consensus 1 kIl~~~~~~--~~GG~~~~~~~l~~~L~~~~~-~v~~i~~~~~~~--~--~~~-~~---------------~~~~----~ 53 (358)
T cd03812 1 KILHIVGTM--NRGGIETFIMNYYRNLDRSKI-QFDFLVTSKEEG--D--YDD-EI---------------EKLG----G 53 (358)
T ss_pred CEEEEeCCC--CCccHHHHHHHHHHhcCccce-EEEEEEeCCCCc--c--hHH-HH---------------HHcC----C
Confidence 588888877 577877333333488888888 999997643211 0 000 00 0111 1
Q ss_pred eeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC-Cc-EEEEEEcChhhHHhhhccchh
Q 007438 391 KISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-NH-VVGVVHTNYLEYIKREKNGAL 468 (604)
Q Consensus 391 ~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~P-VVgiyHTNY~eYary~~~G~l 468 (604)
++...|.+...... -+..+.+++..+++||+|.+.+. .+++ ...+.+.+ .| +|...|..+...... ...
T Consensus 54 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Dvv~~~~~~-~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~- 124 (358)
T cd03812 54 KIYYIPARKKNPLK---YFKKLYKLIKKNKYDIVHVHGSS-ASGF--ILLAAKKAGVKVRIAHSHNTSDSHDKK--KKI- 124 (358)
T ss_pred eEEEecCCCccHHH---HHHHHHHHHhcCCCCEEEEeCcc-hhHH--HHHHHhhCCCCeEEEEecccccccccc--chh-
Confidence 11111111111111 11234456788999999999987 4444 22222222 24 355566655321110 000
Q ss_pred HHHHHHHHHHHHHHhhCCceeeCchhhhhcc-----CCcceeE-EeecCCCCCCCccc-hhhhhhccCCCCceEEEEecc
Q 007438 469 QAFFVKHINNWVTRAYCDKVLRLSAATQDLP-----KSVICNV-HGVNPKFLQIGEKV-ATDREQGQQAFSKGAYFLGKM 541 (604)
Q Consensus 469 ~aplvR~~~r~~~r~yCdkVI~LS~avq~l~-----ks~V~nV-hGVdp~fF~pg~r~-a~rr~~g~~~~~KvvLFVGRL 541 (604)
...+++.+.+ ...|+.+|+.|....+.. +..+..| .||+...|.+.... ..+++.+...+..+++|+||+
T Consensus 125 --~~~~~~~~~~-~~~~~~~i~~s~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr~ 201 (358)
T cd03812 125 --LKYKVLRKLI-NRLATDYLACSEEAGKWLFGKVKNKKFKVIPNGIDLEKFIFNEEIRKKRRELGILEDKFVIGHVGRF 201 (358)
T ss_pred --hHHHHHHHHH-HhcCCEEEEcCHHHHHHHHhCCCcccEEEEeccCcHHHcCCCchhhhHHHHcCCCCCCEEEEEEecc
Confidence 0113333333 448999999998876643 2334444 49997777654321 113345556677899999999
Q ss_pred ccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCC
Q 007438 542 VWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGR 595 (604)
Q Consensus 542 vwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~l 595 (604)
.++||++.|++++..+....++++++|+|+||+.+.+++.+.++++ .+.|+|..
T Consensus 202 ~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~ 257 (358)
T cd03812 202 SEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVR 257 (358)
T ss_pred ccccChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEeccc
Confidence 9999999999999999888889999999999999999999998888 79999983
No 23
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.61 E-value=1.9e-14 Score=135.72 Aligned_cols=243 Identities=18% Similarity=0.145 Sum_probs=158.2
Q ss_pred eEEEEecCCCCcccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCC
Q 007438 311 NVAIVTTASLPWMTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKA 388 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~ 388 (604)
||.++|.+.. ++|+. +..|. .+|.+.|+ +|+++.+............+..
T Consensus 1 kIl~~~~~~~--~gG~~~~~~~l~--~~l~~~g~-~v~v~~~~~~~~~~~~~~~~~~----------------------- 52 (353)
T cd03811 1 KILFVIPSLG--GGGAERVLLNLA--NGLDKRGY-DVTLVVLRDEGDYLELLPSNVK----------------------- 52 (353)
T ss_pred CeEEEeeccc--CCCcchhHHHHH--HHHHhcCc-eEEEEEcCCCCccccccccchh-----------------------
Confidence 5888888765 78877 55555 88999999 9999987654322210000000
Q ss_pred CceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcC-CCcEEEEEEcChhhHHhhhccch
Q 007438 389 DFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDK-FNHVVGVVHTNYLEYIKREKNGA 467 (604)
Q Consensus 389 ~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~K-f~PVVgiyHTNY~eYary~~~G~ 467 (604)
........ ......+.....+.+++...++|++|.+.+ ...++ ...+..+ -.|+|.++|..+.........
T Consensus 53 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dii~~~~~-~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-- 124 (353)
T cd03811 53 LIPVRVLK---LKSLRDLLAILRLRRLLRKEKPDVVISHLT-TTPNV--LALLAARLGTKLIVWEHNSLSLELKRKLR-- 124 (353)
T ss_pred hhceeeee---cccccchhHHHHHHHHHHhcCCCEEEEcCc-cchhH--HHHHHhhcCCceEEEEcCcchhhhccchh--
Confidence 00111111 011111223345667788899999999997 22222 1122221 248999999998644432111
Q ss_pred hHHHHHHHHHHHHHHhhCCceeeCchhhhhccC-------CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEe
Q 007438 468 LQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK-------SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLG 539 (604)
Q Consensus 468 l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k-------s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVG 539 (604)
.. .+...+.. .+|.||+.|...++... ..+..| +|++...+.+...... .........+++|+|
T Consensus 125 ~~-----~~~~~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~g 196 (353)
T cd03811 125 LL-----LLIRKLYR-RADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL--ELGIPPDGPVILAVG 196 (353)
T ss_pred HH-----HHHHhhcc-ccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh--hcCCCCCceEEEEEe
Confidence 00 33344444 89999999998777331 223333 4888777766443211 223345678899999
Q ss_pred ccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCC
Q 007438 540 KMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDH 597 (604)
Q Consensus 540 RLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldh 597 (604)
|+...||++.++++++.+....++++|+|+|+|++.+++++.+.++++ .+.|+|..+.
T Consensus 197 ~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 256 (353)
T cd03811 197 RLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQSN 256 (353)
T ss_pred cchhhcChHHHHHHHHHhhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEecccCC
Confidence 999999999999999998877778999999999999999999999988 7999998654
No 24
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.61 E-value=3.5e-14 Score=142.94 Aligned_cols=177 Identities=15% Similarity=0.115 Sum_probs=120.6
Q ss_pred CCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchh---HHHHHHHHHHHHHHhhCCceeeCc
Q 007438 416 IPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGAL---QAFFVKHINNWVTRAYCDKVLRLS 492 (604)
Q Consensus 416 L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l---~aplvR~~~r~~~r~yCdkVI~LS 492 (604)
+...++||+|..+....-++ .....+ .|+|.+.|.. +.....+.+.+ .....+++.+++.+ +||.||+.|
T Consensus 90 ~~~~~~Dvi~~~~~~~~~~~---~~~~~~-~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~ad~ii~~s 162 (392)
T cd03805 90 LPDEKYDVFIVDQVSACVPL---LKLFSP-SKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTG-MADKIVVNS 162 (392)
T ss_pred cccCCCCEEEEcCcchHHHH---HHHhcC-CcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhh-CceEEEEcC
Confidence 56678999998774322221 122233 6888888843 22211122222 12234455555555 999999999
Q ss_pred hhhhhccC--------CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccC--
Q 007438 493 AATQDLPK--------SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDL-- 561 (604)
Q Consensus 493 ~avq~l~k--------s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~-- 561 (604)
..+++... ..+..| .||+...|.+.................+++|+||+..+||++.|+++++++....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~~~~~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~ 242 (392)
T cd03805 163 NFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPGLLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAE 242 (392)
T ss_pred hhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccccccccccCCCceEEEEEeeecccCChHHHHHHHHHHHhhccc
Confidence 98777332 111133 4999888876443222223344566788999999999999999999999988776
Q ss_pred -CCcEEEEEecCCCH--------HHHHHHHHh-cCC--cEEEcCCCCCCc
Q 007438 562 -DGFKLDVFGNGEDA--------YEVQSAAKR-LDL--NLNFQKGRDHAD 599 (604)
Q Consensus 562 -~~~kLdIVGDGPDr--------eeLk~~a~~-LgL--~V~FtG~ldhad 599 (604)
++++|+|+|+|+.+ +++++.+.+ +++ +|.|+|.+++.+
T Consensus 243 ~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~ 292 (392)
T cd03805 243 FKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQ 292 (392)
T ss_pred ccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHH
Confidence 78999999999874 789999998 888 899999987653
No 25
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.61 E-value=3.9e-14 Score=135.65 Aligned_cols=263 Identities=17% Similarity=0.070 Sum_probs=157.5
Q ss_pred eEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCc
Q 007438 311 NVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADF 390 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~ 390 (604)
+|.+++..+-|-..|...-..-=|.+|.+.|| +|+++.+......... ... .. ..... ..
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g~-~v~v~~~~~~~~~~~~--~~~--~~--------------~~~~~-~~ 60 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLGH-EVTVATTDAGGDPLLV--ALN--GV--------------PVKLF-SI 60 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhcCC-cEEEEecCCCCccchh--hcc--Cc--------------eeeec-cc
Confidence 58899988888999988444444599999999 9999987654322210 000 00 00000 00
Q ss_pred eeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChhhHHhhhccchhH
Q 007438 391 KISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYLEYIKREKNGALQ 469 (604)
Q Consensus 391 ~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~eYary~~~G~l~ 469 (604)
.....+... ...+.............++||+|++++.....+. ...+.++. .|+|...|..+..+.. ....+.
T Consensus 61 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~ 134 (375)
T cd03821 61 NVAYGLNLA---RYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLA-AARAARKYGIPYVVSPHGMLDPWAL--PHKALK 134 (375)
T ss_pred chhhhhhhh---hhccChhHHHHHHHhCCCCCEEEEecccchHHHH-HHHHHHHhCCCEEEEcccccccccc--ccchhh
Confidence 000000000 0000000111122344679999999975544442 22232222 4889999988876553 112222
Q ss_pred HHHHHHHHHHHHHhhCCceeeCchhhhhcc-----CCcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEecccc
Q 007438 470 AFFVKHINNWVTRAYCDKVLRLSAATQDLP-----KSVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVW 543 (604)
Q Consensus 470 aplvR~~~r~~~r~yCdkVI~LS~avq~l~-----ks~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvw 543 (604)
..+...+........++.|++.|....... ...+..| +|++...|.+......+...+....+.+++|+||+..
T Consensus 135 ~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 214 (375)
T cd03821 135 KRLAWFLFERRLLQAAAAVHATSEQEAAEIRRLGLKAPIAVIPNGVDIPPFAALPSRGRRRKFPILPDKRIILFLGRLHP 214 (375)
T ss_pred hHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhCCcccEEEcCCCcChhccCcchhhhhhhhccCCCCCcEEEEEeCcch
Confidence 222233333344447888888886554422 2223333 4888777766442222333445667889999999999
Q ss_pred ccCHHHHHHHHHHhhccCCCcEEEEEecCCC--HHHHHHHHHhcCC--cEEEcCCCCCCc
Q 007438 544 AKGYRELIDLLAKHKNDLDGFKLDVFGNGED--AYEVQSAAKRLDL--NLNFQKGRDHAD 599 (604)
Q Consensus 544 EKGfD~LLdl~~~v~~~~~~~kLdIVGDGPD--reeLk~~a~~LgL--~V~FtG~ldhad 599 (604)
.||++.|++++..+.+..++++|+|+|+|+. ...++..+.++++ +|.|+|.+++++
T Consensus 215 ~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 274 (375)
T cd03821 215 KKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGED 274 (375)
T ss_pred hcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHH
Confidence 9999999999999888788999999998765 4556665577777 899999998654
No 26
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.60 E-value=4.8e-14 Score=133.85 Aligned_cols=258 Identities=17% Similarity=0.156 Sum_probs=162.4
Q ss_pred EEEEecCCCCc-ccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCc
Q 007438 312 VAIVTTASLPW-MTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADF 390 (604)
Q Consensus 312 IaIfTTAsLPW-mTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~ 390 (604)
|.|+|..+.|+ -+|.+.-..--+.+|.+.|+ +|+++.+.-....... .. .... ..........
T Consensus 1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~g~-~v~v~~~~~~~~~~~~--~~-~~~~------------~~~~~~~~~~ 64 (377)
T cd03798 1 ILVISSLYPPPNNGGGGIFVKELARALAKRGV-EVTVLAPGPWGPKLLD--LL-KGRL------------VGVERLPVLL 64 (377)
T ss_pred CeEeccCCCCCCCchHHHHHHHHHHHHHHCCC-ceEEEecCCCCCCchh--hc-cccc------------ccccccccCc
Confidence 45677776665 67777434333499999999 9999987653222211 00 0000 0000000000
Q ss_pred eeeccCCcccccccCccCCccccccCC--CCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChhhHHhhhccch
Q 007438 391 KISFYPGKFSKERRSIIPAGDTSQFIP--SKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYLEYIKREKNGA 467 (604)
Q Consensus 391 ~i~fYPgry~a~~~SI~p~gdI~r~L~--~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~eYary~~~G~ 467 (604)
.....+.+ ..........+.+++. ..++|++|+..+...++. .....+.+ .|+|.++|..+........
T Consensus 65 ~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~--~~~~~~~~~~~~i~~~h~~~~~~~~~~~--- 136 (377)
T cd03798 65 PVVPLLKG---PLLYLLAARALLKLLKLKRFRPDLIHAHFAYPDGFA--AALLKRKLGIPLVVTLHGSDVNLLPRKR--- 136 (377)
T ss_pred chhhcccc---chhHHHHHHHHHHHHhcccCCCCEEEEeccchHHHH--HHHHHHhcCCCEEEEeecchhcccCchh---
Confidence 00001100 0111122344666787 899999999976655544 23333332 3889999987753322111
Q ss_pred hHHHHHHHHHHHHHHhhCCceeeCchhhhhccC------CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEec
Q 007438 468 LQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK------SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGK 540 (604)
Q Consensus 468 l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k------s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGR 540 (604)
..+.+.+.+.. .||.||+.|...++... ..+..| .|+++..|.+...... ...........++|+|+
T Consensus 137 ----~~~~~~~~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~g~ 210 (377)
T cd03798 137 ----LLRALLRRALR-RADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEA-RKLGLPEDKKVILFVGR 210 (377)
T ss_pred ----hHHHHHHHHHh-cCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcchHHH-HhccCCCCceEEEEecc
Confidence 33445455555 89999999998877432 222233 4888888876543221 12233446778999999
Q ss_pred cccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCCCc
Q 007438 541 MVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDHAD 599 (604)
Q Consensus 541 LvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldhad 599 (604)
+...||++.++++++.+....+++++.|+|+|++.+.+++.++++++ +|.|+|.+++.+
T Consensus 211 ~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 271 (377)
T cd03798 211 LVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEE 271 (377)
T ss_pred CccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHH
Confidence 99999999999999998877788999999999999999999988887 899999997653
No 27
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.59 E-value=1.6e-14 Score=151.73 Aligned_cols=170 Identities=13% Similarity=0.058 Sum_probs=116.4
Q ss_pred ccccCCCCCCcEEEEcCcchhhhhcchhhhhc--CC-CcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCce
Q 007438 412 TSQFIPSKDADIAILEEPEHLNWYHHGKRWTD--KF-NHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (604)
Q Consensus 412 I~r~L~~f~pDVVHLeEPehLGwy~~Garwt~--Kf-~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkV 488 (604)
+.+.++..++|++|.+.. +.++. +...+. .. .+++.++|..- -|... ... ..+...+.+.+ .||.|
T Consensus 110 ~~~~~~~~~~diihaH~~-~~~~~--~~~~~~~~~~~~~~~~t~Hg~d-~~~~~-~~~-----~~~~~~~~~~~-~ad~v 178 (406)
T PRK15427 110 CAQVATPFVADVFIAHFG-PAGVT--AAKLRELGVLRGKIATIFHGID-ISSRE-VLN-----HYTPEYQQLFR-RGDLM 178 (406)
T ss_pred HhhhhccCCCCEEEEcCC-hHHHH--HHHHHHhCCCCCCeEEEEcccc-cccch-hhh-----hhhHHHHHHHH-hCCEE
Confidence 344567889999999873 43443 222221 11 36788999531 12110 000 01112233334 79999
Q ss_pred eeCchhhhhccC-C-----cceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccC
Q 007438 489 LRLSAATQDLPK-S-----VICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDL 561 (604)
Q Consensus 489 I~LS~avq~l~k-s-----~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~ 561 (604)
|+.|+..++... . .|..| .|||++.|.+..+.. ......++|||||...||++.|+++++.+.+..
T Consensus 179 v~~S~~~~~~l~~~g~~~~ki~vi~nGvd~~~f~~~~~~~-------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~ 251 (406)
T PRK15427 179 LPISDLWAGRLQKMGCPPEKIAVSRMGVDMTRFSPRPVKA-------PATPLEIISVARLTEKKGLHVAIEACRQLKEQG 251 (406)
T ss_pred EECCHHHHHHHHHcCCCHHHEEEcCCCCCHHHcCCCcccc-------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhC
Confidence 999997666332 1 22223 499988887643211 123457999999999999999999999988777
Q ss_pred CCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCCCc
Q 007438 562 DGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDHAD 599 (604)
Q Consensus 562 ~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldhad 599 (604)
++++|+|+|+||.++++++.++++|+ .|.|+|.+++.+
T Consensus 252 ~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~e 291 (406)
T PRK15427 252 VAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHE 291 (406)
T ss_pred CCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHH
Confidence 88999999999999999999999999 799999987654
No 28
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.59 E-value=3.9e-14 Score=138.56 Aligned_cols=174 Identities=17% Similarity=0.143 Sum_probs=121.0
Q ss_pred cccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceee
Q 007438 411 DTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLR 490 (604)
Q Consensus 411 dI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~ 490 (604)
.+.+++.+++|||+|.+.+. .+++.....+..+..|+|.+.|+.... + ....++. ..+..+++.++.
T Consensus 70 ~~~~~~~~~~pdiv~~~~~~-~~~~~~l~~~~~~~~~~v~~~h~~~~~-------~----~~~~~~~-~~~~~~~~~~~~ 136 (360)
T cd04951 70 KLRKILRQFKPDVVHAHMFH-ANIFARLLRLFLPSPPLICTAHSKNEG-------G----RLRMLAY-RLTDFLSDLTTN 136 (360)
T ss_pred HHHHHHHhcCCCEEEEcccc-hHHHHHHHHhhCCCCcEEEEeeccCch-------h----HHHHHHH-HHHhhccCceEE
Confidence 35566888999999999853 333322222333334888888875421 1 1122332 334447888888
Q ss_pred Cchhhhhcc-------CCcceeE-EeecCCCCCCCcc--chhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhcc
Q 007438 491 LSAATQDLP-------KSVICNV-HGVNPKFLQIGEK--VATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKND 560 (604)
Q Consensus 491 LS~avq~l~-------ks~V~nV-hGVdp~fF~pg~r--~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~ 560 (604)
.|....+.. ...+..| .||++..|.+... ...+.+.+..++..+++|+||+..+||++.+++++.++...
T Consensus 137 ~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~ 216 (360)
T cd04951 137 VSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSD 216 (360)
T ss_pred EcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhh
Confidence 887766532 2233334 4888777755322 22233445556778999999999999999999999988877
Q ss_pred CCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCC
Q 007438 561 LDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDH 597 (604)
Q Consensus 561 ~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldh 597 (604)
.++++|+|+|+|++.+++++.+.++++ ++.|+|..+.
T Consensus 217 ~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~ 255 (360)
T cd04951 217 YLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDD 255 (360)
T ss_pred CCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEeccccc
Confidence 789999999999999999999999888 7999998653
No 29
>PLN02939 transferase, transferring glycosyl groups
Probab=99.59 E-value=5.9e-14 Score=162.07 Aligned_cols=401 Identities=16% Similarity=0.153 Sum_probs=221.6
Q ss_pred hhHHHHHHHHHHHHHhhchhhhhHhcCCCc-hhHHHHHHhhhhhhccCCCCC-CCCCCCChH-HHHH-HHHHhhcccccc
Q 007438 157 EPIRTLKMRLREFERKRELSVEEIFGGFKS-SDFVEKVKSSWKAICKEPEES-KDVPPLDPT-ELLA-HLVRQSGPFLDH 232 (604)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~-~~~~~~~~~~~~ 232 (604)
+.+.-+...++-+|.+-+-+.+||..-..- .+-++.|..+|+.+..|+.-+ -+.|--+.| |+-. -|+|=-+=+|..
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~id~~~~~~ 430 (977)
T PLN02939 351 YKVELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEESKKRSLEHPADDMPSEFWSRILLLIDGWLLEK 430 (977)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCchhhCCHHHHHHHHHHHHHHHHhc
Confidence 466777788888888888888888888777 777888888888887665442 345555555 3332 234433322222
Q ss_pred cccchhhhHHHHHHHhhhhhh-hhhhhhcccCCCccccccCCCccccchhhhccccCcccccCcccccCCCCCCCCCCce
Q 007438 233 LGVKRDLCDKIVESLCSKRKE-QLLLRSIAGGECSVLENDNINDELDLRIASVLQSTGHHYEGGFWTDFGKDDLSDKKRN 311 (604)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 311 (604)
+ |..+-...+.+........ +-.|-.... .=|-.+.+-+.. |+.+ ...++|+
T Consensus 431 ~-~~~~~a~~lr~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~---------~~~~----~~~~~mk 483 (977)
T PLN02939 431 K-ISNNDAKLLREMVWKRDGRIREAYLSCKG-------------KNEREAVENFLK---------LTLS----GTSSGLH 483 (977)
T ss_pred c-CChhhHHHHHHHHHhhhhhHHHHHHHHhc-------------CchHHHHHHHHH---------hccC----CCCCCCE
Confidence 1 1223333444443322110 001111110 011111111211 2222 2247899
Q ss_pred EEEEecCCCCcc-cc-hh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccC----CceeCChh-HHHHHHHHHHHH
Q 007438 312 VAIVTTASLPWM-TG-TA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYP----NVTFCSPE-EQENYMRNWLEE 382 (604)
Q Consensus 312 IaIfTTAsLPWm-TG-tA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vyp----n~rF~Spe-eQe~~ir~wl~~ 382 (604)
|..||.=..||. || .| |--|- .+|++.|| +|.+++|.|..-.+..+.. ...+.++- -|..+++=|-
T Consensus 484 ILfVasE~aP~aKtGGLaDVv~sLP--kAL~~~Gh-dV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~-- 558 (977)
T PLN02939 484 IVHIAAEMAPVAKVGGLADVVSGLG--KALQKKGH-LVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT-- 558 (977)
T ss_pred EEEEEcccccccccccHHHHHHHHH--HHHHHcCC-eEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEE--
Confidence 999999999996 44 44 77777 88999999 9999999997432111100 11111100 0000111111
Q ss_pred HhCCCCCceeecc----CCcccccccCccCC-ccc----------cccCC--CCCCcEEEEcCcchhhhhcch--hhh-h
Q 007438 383 RVGFKADFKISFY----PGKFSKERRSIIPA-GDT----------SQFIP--SKDADIAILEEPEHLNWYHHG--KRW-T 442 (604)
Q Consensus 383 r~g~~~~~~i~fY----Pgry~a~~~SI~p~-gdI----------~r~L~--~f~pDVVHLeEPehLGwy~~G--arw-t 442 (604)
|.-+.+++.|. |..|.. +..|+.- .+. ..++. .++|||||+++ -|-|..... ..+ .
T Consensus 559 --~~~~GV~vyfId~~~~~~fF~-R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HD-W~TaLV~pll~~~y~~ 634 (977)
T PLN02939 559 --GTVEGLPVYFIEPQHPSKFFW-RAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHD-WQTAFVAPLYWDLYAP 634 (977)
T ss_pred --EEECCeeEEEEecCCchhccC-CCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECC-ccHHHHHHHHHHHHhh
Confidence 11122333322 211111 1112211 111 12232 37899999999 454443111 001 1
Q ss_pred cCC--CcEEEEEEcChhhHHhhhc------cchhH----HH-HH-----HHHHHHHH--HhhCCceeeCchhhhhcc---
Q 007438 443 DKF--NHVVGVVHTNYLEYIKREK------NGALQ----AF-FV-----KHINNWVT--RAYCDKVLRLSAATQDLP--- 499 (604)
Q Consensus 443 ~Kf--~PVVgiyHTNY~eYary~~------~G~l~----ap-lv-----R~~~r~~~--r~yCdkVI~LS~avq~l~--- 499 (604)
..+ .++|.++|-.- |--.++ .|.-. .+ -+ ..+ |.+. -.|||+|++.|+...+-.
T Consensus 635 ~~~~~~ktVfTIHNl~--yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~i-N~LK~GIv~AD~VtTVSptYA~EI~te 711 (977)
T PLN02939 635 KGFNSARICFTCHNFE--YQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRI-NVVKGAIVYSNIVTTVSPTYAQEVRSE 711 (977)
T ss_pred ccCCCCcEEEEeCCCc--CCCcCCHHHHHHcCCCHHHccChhhhhhccCCch-HHHHHHHHhCCeeEeeeHHHHHHHHHH
Confidence 112 37899999772 222111 11100 01 01 011 2222 238999999999765421
Q ss_pred ------------CCcceeE-EeecCCCCCCCc-------------------cchhhhhhccCC---CCceEEEEeccccc
Q 007438 500 ------------KSVICNV-HGVNPKFLQIGE-------------------KVATDREQGQQA---FSKGAYFLGKMVWA 544 (604)
Q Consensus 500 ------------ks~V~nV-hGVdp~fF~pg~-------------------r~a~rr~~g~~~---~~KvvLFVGRLvwE 544 (604)
+..+..| .|||++.|+|.. +.+.+.+.|.+. ..++++|||||+.+
T Consensus 712 ~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~Q 791 (977)
T PLN02939 712 GGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQ 791 (977)
T ss_pred hccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcc
Confidence 1122333 399999888853 334455667653 56899999999999
Q ss_pred cCHHHHHHHHHHhhccCCCcEEEEEecCCCH---HHHHHHHHhcCC--cEEEcCCCCCC
Q 007438 545 KGYRELIDLLAKHKNDLDGFKLDVFGNGEDA---YEVQSAAKRLDL--NLNFQKGRDHA 598 (604)
Q Consensus 545 KGfD~LLdl~~~v~~~~~~~kLdIVGDGPDr---eeLk~~a~~LgL--~V~FtG~ldha 598 (604)
||++.|++++..+.. .+++|+|+|+||+. +++++.+.++++ .|.|+|..++.
T Consensus 792 KGiDlLleA~~~Ll~--~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~ 848 (977)
T PLN02939 792 KGVHLIRHAIYKTAE--LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEA 848 (977)
T ss_pred cChHHHHHHHHHHhh--cCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHH
Confidence 999999999977654 46899999999984 788899998887 69999987654
No 30
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.59 E-value=3.6e-14 Score=141.40 Aligned_cols=183 Identities=14% Similarity=0.090 Sum_probs=121.8
Q ss_pred cccCCCC--CCcEEEEcCcchhhhhcchhhhhcCCC-cEEEEEEcChhhHHhhhccchhHHH-HHHHHHHHHHHhhCCce
Q 007438 413 SQFIPSK--DADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAF-FVKHINNWVTRAYCDKV 488 (604)
Q Consensus 413 ~r~L~~f--~pDVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyHTNY~eYary~~~G~l~ap-lvR~~~r~~~r~yCdkV 488 (604)
.+.+... ++||||++.+ ..++. +..++++.+ |+|.++|..+..+...........+ ....+.+++.+ .||.|
T Consensus 92 ~~~~~~~~~~~Div~~~~~-~~~~~--~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ad~i 167 (398)
T cd03800 92 LRFLRREGGRPDLIHAHYW-DSGLV--ALLLARRLGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLR-AADRV 167 (398)
T ss_pred HHHHHhcCCCccEEEEecC-ccchH--HHHHHhhcCCceEEEeecccccCCcccccccccchhhhhhHHHHHHh-hCCEE
Confidence 3345555 8999999874 44444 333444444 8899999876433322111111011 11223344555 89999
Q ss_pred eeCchhhhhcc-C------CcceeE-EeecCCCCCCCccchh-hhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhc
Q 007438 489 LRLSAATQDLP-K------SVICNV-HGVNPKFLQIGEKVAT-DREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKN 559 (604)
Q Consensus 489 I~LS~avq~l~-k------s~V~nV-hGVdp~fF~pg~r~a~-rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~ 559 (604)
|+.|....+.. + ..+..| .|+++..|.+...... +.....+....+++|+||+...||++.|++++..+..
T Consensus 168 i~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 168 IASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred EEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhccCCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 99998765422 1 113333 3888887766544322 2334445667899999999999999999999999887
Q ss_pred cCCCcEEEEEecCCCH------HHHHHHHHhcCC--cEEEcCCCCCCc
Q 007438 560 DLDGFKLDVFGNGEDA------YEVQSAAKRLDL--NLNFQKGRDHAD 599 (604)
Q Consensus 560 ~~~~~kLdIVGDGPDr------eeLk~~a~~LgL--~V~FtG~ldhad 599 (604)
..++++|+|+|+|++. .+++..+..+++ ++.|+|+++..+
T Consensus 248 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 295 (398)
T cd03800 248 LRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSRED 295 (398)
T ss_pred hCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHH
Confidence 7788999999999863 456777788887 799999987643
No 31
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.59 E-value=3.5e-14 Score=142.75 Aligned_cols=249 Identities=16% Similarity=0.094 Sum_probs=144.8
Q ss_pred ceEEEEecCCCCcc-cchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCC-ceeCChhHHHHHHHHHHHHHhC
Q 007438 310 RNVAIVTTASLPWM-TGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVG 385 (604)
Q Consensus 310 r~IaIfTTAsLPWm-TGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn-~rF~SpeeQe~~ir~wl~~r~g 385 (604)
|+|+++|+.|.|.. .|+. |.-|. .+|.+. + +|++++.--...+.+. -+ ++|..+..
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~--~~l~~~-~-~v~v~~~~~~~~~~~~--~~~~~~~~~~~-------------- 60 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELT--RELARL-M-DVDVRCFGDQRFDSEG--LTVKGYRPWSE-------------- 60 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHH--HHHHHh-c-CeeEEcCCCchhcCCC--eEEEEecChhh--------------
Confidence 89999999999997 4544 77666 888876 4 7776653221111110 01 23332100
Q ss_pred CCCCceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhh-c
Q 007438 386 FKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKRE-K 464 (604)
Q Consensus 386 ~~~~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~-~ 464 (604)
+.. +......+ ..++.......++||+|.+.+.. +..+.......+ .|+|.++|..+....... .
T Consensus 61 ---------~~~-~~~~~~~~--~~~~~~~~~~~~~divh~~~~~~-~~~~~~~~~~~~-~p~v~~~h~~~~~~~~~~~~ 126 (388)
T TIGR02149 61 ---------LKE-ANKALGTF--SVDLAMANDPVDADVVHSHTWYT-FLAGHLAKKLYD-KPLVVTAHSLEPLRPWKEEQ 126 (388)
T ss_pred ---------ccc-hhhhhhhh--hHHHHHhhCCCCCCeEeecchhh-hhHHHHHHHhcC-CCEEEEeecccccccccccc
Confidence 000 00000000 01222223334799999998543 222111111122 488999997653111100 0
Q ss_pred cchhHHHHHHHHHHHHHHhhCCceeeCchhhhhcc--------CCcceeE-EeecCCCCCCCccchhhhhhccCCCCceE
Q 007438 465 NGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLP--------KSVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGA 535 (604)
Q Consensus 465 ~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~--------ks~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~Kvv 535 (604)
.+. ......++.+.+.+ .||.||++|...++.. ...+..| .||++..|.+..+...+.+.+.+...+++
T Consensus 127 ~~~-~~~~~~~~~~~~~~-~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~i 204 (388)
T TIGR02149 127 LGG-GYKLSSWAEKTAIE-AADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGNVVLDRYGIDRSRPYI 204 (388)
T ss_pred ccc-chhHHHHHHHHHHh-hCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCchHHHHHHhCCCCCceEE
Confidence 010 01134445455555 8999999999776522 1223333 49998888876655556666666777899
Q ss_pred EEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHH----HHHHHHhcCC---cEEEc-CCCCC
Q 007438 536 YFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYE----VQSAAKRLDL---NLNFQ-KGRDH 597 (604)
Q Consensus 536 LFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDree----Lk~~a~~LgL---~V~Ft-G~ldh 597 (604)
+|+||+..+||++.|+++++++. +++++.|+|+|++.++ +++.+.+++. ++.|. |..++
T Consensus 205 ~~~Grl~~~Kg~~~li~a~~~l~---~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 271 (388)
T TIGR02149 205 LFVGRITRQKGVPHLLDAVHYIP---KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPK 271 (388)
T ss_pred EEEcccccccCHHHHHHHHHHHh---hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCH
Confidence 99999999999999999998764 4678999999998654 5555555555 36765 44544
No 32
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.58 E-value=7e-14 Score=137.26 Aligned_cols=249 Identities=15% Similarity=0.115 Sum_probs=148.4
Q ss_pred eEEEEecC-CCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCC
Q 007438 311 NVAIVTTA-SLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKAD 389 (604)
Q Consensus 311 ~IaIfTTA-sLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~ 389 (604)
||+|+++. +.|-..|+......-|.+|.+.|| +|+++.+.-.....+..++++++-.
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g~-~v~v~~~~~~~~~~~~~~~~i~~~~--------------------- 58 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARGH-EVTVYCRSPYPKQKETEYNGVRLIH--------------------- 58 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcCC-CEEEEEccCCCCCcccccCCceEEE---------------------
Confidence 68999665 556667777655666799999999 9999987643322122233322111
Q ss_pred ceeeccCCcc-cccccCccCCccccccC-CCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccch
Q 007438 390 FKISFYPGKF-SKERRSIIPAGDTSQFI-PSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGA 467 (604)
Q Consensus 390 ~~i~fYPgry-~a~~~SI~p~gdI~r~L-~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~ 467 (604)
.|... .......+....+.+.+ ...++|++|...|....+. ......+ .|+|.+.|... +.. ...+.
T Consensus 59 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~-~~~v~~~h~~~--~~~-~~~~~ 127 (363)
T cd04955 59 -----IPAPEIGGLGTIIYDILAILHALFVKRDIDHVHALGPAIAPFL--PLLRLKG-KKVVVNMDGLE--WKR-AKWGR 127 (363)
T ss_pred -----cCCCCccchhhhHHHHHHHHHHHhccCCeEEEEecCccHHHHH--HHHHhcC-CCEEEEccCcc--eee-ccccc
Confidence 11000 00000001111111111 3556788888877653222 1112223 47788888653 211 11222
Q ss_pred hHHHHHHHHHHHHHHhhCCceeeCchhhhhccC--C--cceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccc
Q 007438 468 LQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK--S--VICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMV 542 (604)
Q Consensus 468 l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k--s--~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLv 542 (604)
.....++.+.+.+++ +||.||+.|...++..+ . ....| .||+...+.+ +.......+.. ..+.++|+||+.
T Consensus 128 ~~~~~~~~~~~~~~~-~ad~ii~~s~~~~~~~~~~~~~~~~~i~ngv~~~~~~~--~~~~~~~~~~~-~~~~i~~~G~~~ 203 (363)
T cd04955 128 PAKRYLKFGEKLAVK-FADRLIADSPGIKEYLKEKYGRDSTYIPYGADHVVSSE--EDEILKKYGLE-PGRYYLLVGRIV 203 (363)
T ss_pred chhHHHHHHHHHHHh-hccEEEeCCHHHHHHHHHhcCCCCeeeCCCcChhhcch--hhhhHHhcCCC-CCcEEEEEeccc
Confidence 223345555555555 99999999998877441 1 11233 4888766654 11112223323 345688999999
Q ss_pred cccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHH-hcCC--cEEEcCCCCCCc
Q 007438 543 WAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAK-RLDL--NLNFQKGRDHAD 599 (604)
Q Consensus 543 wEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~-~LgL--~V~FtG~ldhad 599 (604)
..||++.|+++++++.. +++|.|+|+|++..++++.+. .+++ +|+|+|.+.+.+
T Consensus 204 ~~Kg~~~li~a~~~l~~---~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~ 260 (363)
T cd04955 204 PENNIDDLIEAFSKSNS---GKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQE 260 (363)
T ss_pred ccCCHHHHHHHHHhhcc---CceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHH
Confidence 99999999999987654 789999999988888877776 5555 899999998754
No 33
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.58 E-value=8.5e-14 Score=134.87 Aligned_cols=251 Identities=14% Similarity=0.018 Sum_probs=157.2
Q ss_pred eEEEEecCCCC-cccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCC
Q 007438 311 NVAIVTTASLP-WMTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFK 387 (604)
Q Consensus 311 ~IaIfTTAsLP-WmTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~ 387 (604)
+|+|+++.+.| +++|+. +.-|. .+|.+.|+ .|+++++.-.......... ..+..
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~--~~L~~~~~-~v~~~~~~~~~~~~~~~~~-~~~~~------------------- 57 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELL--RALLKLDP-EEVLLLLPGAPGLLLLPLR-AALRL------------------- 57 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHH--HHHHhcCC-ceEEEEecCccccccccch-hcccc-------------------
Confidence 68999999999 999999 44455 99999999 8888877653221110000 01110
Q ss_pred CCceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccch
Q 007438 388 ADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGA 467 (604)
Q Consensus 388 ~~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~ 467 (604)
.+...+.................+...++||+|+..+..... ..+-.|+|.++|-.+..+.... .+.
T Consensus 58 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~-------~~~~~~~i~~~hd~~~~~~~~~-~~~ 124 (365)
T cd03809 58 -----LLRLPRRLLWGLLFLLRAGDRLLLLLLGLDLLHSPHNTAPLL-------RLRGVPVVVTIHDLIPLRFPEY-FSP 124 (365)
T ss_pred -----ccccccccccchhhHHHHHHHHHhhhcCCCeeeecccccCcc-------cCCCCCEEEEeccchhhhCccc-CCH
Confidence 111111111111212222233335557899999999655543 2222488999996553222211 111
Q ss_pred hHHHHHHHHHHHHHHhhCCceeeCchhhhhcc-------CCcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEe
Q 007438 468 LQAFFVKHINNWVTRAYCDKVLRLSAATQDLP-------KSVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLG 539 (604)
Q Consensus 468 l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~-------ks~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVG 539 (604)
......+++.+.+.+ .||.||++|....+.. ...+..+ .|+++..+....... +.........++++|+|
T Consensus 125 ~~~~~~~~~~~~~~~-~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~G 202 (365)
T cd03809 125 GFRRYFRRLLRRALR-RADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE-VLRALYLLPRPYFLYVG 202 (365)
T ss_pred HHHHHHHHHHHHHHH-HcCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHH-HHHHhcCCCCCeEEEeC
Confidence 223345556566666 9999999998776632 1222333 488888876654322 22334455678999999
Q ss_pred ccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHH-HHHHHhcCC--cEEEcCCCCCCc
Q 007438 540 KMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEV-QSAAKRLDL--NLNFQKGRDHAD 599 (604)
Q Consensus 540 RLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeL-k~~a~~LgL--~V~FtG~ldhad 599 (604)
++.+.||++.+++++..+....++++|.|+|+|++.... ...+.++++ .|.|+|.++..+
T Consensus 203 ~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 265 (365)
T cd03809 203 TIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEE 265 (365)
T ss_pred CCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhH
Confidence 999999999999999999887778999999987765443 333344555 899999997654
No 34
>PLN02316 synthase/transferase
Probab=99.56 E-value=2.1e-13 Score=159.06 Aligned_cols=273 Identities=16% Similarity=0.198 Sum_probs=160.0
Q ss_pred cCcccccCCCCC---------CCCCCceEEEEecCCCCcc-cc-hh--hhHHHHHHHHhhcCCceEEEEeecCCCCCccc
Q 007438 293 EGGFWTDFGKDD---------LSDKKRNVAIVTTASLPWM-TG-TA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQEL 359 (604)
Q Consensus 293 ~~~~~~~~~~~~---------~~~~~r~IaIfTTAsLPWm-TG-tA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~ 359 (604)
+||-|.+....+ ...+.|+|.++|.=+.|+. || .+ |--|- ..|++.|| +|.+|+|.|..-....
T Consensus 562 ~g~~yDn~~~~dyh~~v~g~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp--~ALa~~Gh-~V~VitP~Y~~i~~~~ 638 (1036)
T PLN02316 562 EGGIFDNRNGLDYHIPVFGGIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLS--RAVQDLNH-NVDIILPKYDCLNLSH 638 (1036)
T ss_pred CCCCcCCCCCcCCcccccCCCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHH--HHHHHcCC-EEEEEecCCcccchhh
Confidence 667776654322 3345699999999999996 44 33 77777 88999999 9999999996421110
Q ss_pred ccCC----ceeCChhHHHHHHHHHHHHHhCCCCCceeeccC---CcccccccCccCCc-c----------ccccC--CCC
Q 007438 360 VYPN----VTFCSPEEQENYMRNWLEERVGFKADFKISFYP---GKFSKERRSIIPAG-D----------TSQFI--PSK 419 (604)
Q Consensus 360 vypn----~rF~SpeeQe~~ir~wl~~r~g~~~~~~i~fYP---gry~a~~~SI~p~g-d----------I~r~L--~~f 419 (604)
+ ++ ..|.-. ..+++=| .|..+.+++.|-. +.|.. +.|+.-. + ...++ ..+
T Consensus 639 ~-~~~~~~~~~~~~---~~~~~v~----~~~~~GV~vyfl~~~~~~F~r--~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~ 708 (1036)
T PLN02316 639 V-KDLHYQRSYSWG---GTEIKVW----FGKVEGLSVYFLEPQNGMFWA--GCVYGCRNDGERFGFFCHAALEFLLQSGF 708 (1036)
T ss_pred c-ccceEEEEeccC---CEEEEEE----EEEECCcEEEEEeccccccCC--CCCCCchhHHHHHHHHHHHHHHHHHhcCC
Confidence 0 11 111100 0000000 0011223322221 22221 1122100 0 01111 136
Q ss_pred CCcEEEEcCcchhhhhcchhh--h---hcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceeeCchh
Q 007438 420 DADIAILEEPEHLNWYHHGKR--W---TDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAA 494 (604)
Q Consensus 420 ~pDVVHLeEPehLGwy~~Gar--w---t~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~a 494 (604)
+|||||+++ -|-++.+...+ + ...-.|+|.++|.. .|... .. .... .+||+||+.|..
T Consensus 709 ~PDIIHaHD-W~talva~llk~~~~~~~~~~~p~V~TiHnl--~~~~n---------~l----k~~l-~~AD~ViTVS~t 771 (1036)
T PLN02316 709 HPDIIHCHD-WSSAPVAWLFKDHYAHYGLSKARVVFTIHNL--EFGAN---------HI----GKAM-AYADKATTVSPT 771 (1036)
T ss_pred CCCEEEECC-ChHHHHHHHHHHhhhhhccCCCCEEEEeCCc--ccchh---------HH----HHHH-HHCCEEEeCCHH
Confidence 899999998 23333311110 0 01114899999943 23210 11 1223 499999999997
Q ss_pred hhh-ccC--------CcceeE-EeecCCCCCCCc--------------------cchhhhhhccC-CCCceEEEEecccc
Q 007438 495 TQD-LPK--------SVICNV-HGVNPKFLQIGE--------------------KVATDREQGQQ-AFSKGAYFLGKMVW 543 (604)
Q Consensus 495 vq~-l~k--------s~V~nV-hGVdp~fF~pg~--------------------r~a~rr~~g~~-~~~KvvLFVGRLvw 543 (604)
..+ +.. ..+.-| -|||+..|+|.. +...+++.|.+ ...++++|||||+.
T Consensus 772 ya~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~ 851 (1036)
T PLN02316 772 YSREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTH 851 (1036)
T ss_pred HHHHHHhccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEecccc
Confidence 654 211 122333 399988776631 12234556665 36789999999999
Q ss_pred ccCHHHHHHHHHHhhccCCCcEEEEEecCCC---HHHHHHHHHhcCC----cEEEcCCCCC
Q 007438 544 AKGYRELIDLLAKHKNDLDGFKLDVFGNGED---AYEVQSAAKRLDL----NLNFQKGRDH 597 (604)
Q Consensus 544 EKGfD~LLdl~~~v~~~~~~~kLdIVGDGPD---reeLk~~a~~LgL----~V~FtG~ldh 597 (604)
+||++.|++++..+.. .+.+|+|+|+||+ +++|++++.++++ .|.|+|..++
T Consensus 852 qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de 910 (1036)
T PLN02316 852 QKGIHLIKHAIWRTLE--RNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDE 910 (1036)
T ss_pred ccCHHHHHHHHHHHhh--cCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCH
Confidence 9999999999988754 3689999999998 4688899998876 6889887644
No 35
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.56 E-value=6.3e-14 Score=136.80 Aligned_cols=237 Identities=14% Similarity=0.051 Sum_probs=150.6
Q ss_pred eEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCc
Q 007438 311 NVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADF 390 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~ 390 (604)
+|++||+++ |..+.+.+--+. ..|.+.|| +|+++.+.-+..... .+ .+.....--.|+
T Consensus 1 ki~~~~~~~-~~~~~~~~~~~~--~~L~~~g~-~v~v~~~~~~~~~~~---~~-~~~~~~~~~~~~-------------- 58 (355)
T cd03799 1 KIAYLVKEF-PRLSETFILREI--LALEAAGH-EVEIFSLRPPEDTLV---HP-EDRAELARTRYL-------------- 58 (355)
T ss_pred CEEEECCCC-CCcchHHHHHHH--HHHHhCCC-eEEEEEecCcccccc---cc-cccccccchHHH--------------
Confidence 589999997 666667776666 88999999 999997654322110 00 000000001111
Q ss_pred eeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHH
Q 007438 391 KISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQA 470 (604)
Q Consensus 391 ~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~a 470 (604)
.+... .+.....+.+.+.+.++||+|++.+..............+ .+++.++|-.-. |... ..
T Consensus 59 ------~~~~~---~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~---~~--- 121 (355)
T cd03799 59 ------ARSLA---LLAQALVLARELRRLGIDHIHAHFGTTPATVAMLASRLGG-IPYSFTAHGKDI-FRSP---DA--- 121 (355)
T ss_pred ------HHHHH---HHHHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHhcC-CCEEEEEecccc-cccC---ch---
Confidence 01111 1111223444467789999999986433222111122222 477888884321 1110 00
Q ss_pred HHHHHHHHHHHHhhCCceeeCchhhhhccCC-------cceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccc
Q 007438 471 FFVKHINNWVTRAYCDKVLRLSAATQDLPKS-------VICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMV 542 (604)
Q Consensus 471 plvR~~~r~~~r~yCdkVI~LS~avq~l~ks-------~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLv 542 (604)
.+.+...+ .||.||+.|...++..+. .+..| .||+...|.+... ........++|+|++.
T Consensus 122 ----~~~~~~~~-~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~-------~~~~~~~~i~~~g~~~ 189 (355)
T cd03799 122 ----IDLDEKLA-RADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPP-------PPPGEPLRILSVGRLV 189 (355)
T ss_pred ----HHHHHHHh-hCCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCccc-------cccCCCeEEEEEeeec
Confidence 22233444 899999999988774321 22223 4888777765430 1133467899999999
Q ss_pred cccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCCC
Q 007438 543 WAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDHA 598 (604)
Q Consensus 543 wEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldha 598 (604)
..||++.|++++..+....+++++.|+|+|+..+++++.++++++ +|.|+|.++..
T Consensus 190 ~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 247 (355)
T cd03799 190 EKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQE 247 (355)
T ss_pred cccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChH
Confidence 999999999999988877788999999999999999999999888 79999999743
No 36
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.54 E-value=1.6e-13 Score=133.00 Aligned_cols=239 Identities=17% Similarity=0.090 Sum_probs=146.5
Q ss_pred eEEEEecCCCCcccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCC
Q 007438 311 NVAIVTTASLPWMTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKA 388 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~ 388 (604)
+|+|+++ +.|...|+. +..|. .+|.+.|| .|+++..--...... ....+ ..
T Consensus 1 kI~~v~~-~~~~~gG~~~~~~~l~--~~L~~~g~-~v~v~~~~~~~~~~~---~~~~~--------------------~~ 53 (366)
T cd03822 1 RIALVSP-YPPRKCGIATFTTDLV--NALSARGP-DVLVVSVAALYPSLL---YGGEQ--------------------EV 53 (366)
T ss_pred CeEEecC-CCCCCCcHHHHHHHHH--HHhhhcCC-eEEEEEeecccCccc---CCCcc--------------------cc
Confidence 5888875 689899988 55565 99999999 777774322111111 00000 00
Q ss_pred CceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchh--hhhcch-hhhhcCC-CcEEEEEEcChhhHHhhhc
Q 007438 389 DFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHL--NWYHHG-KRWTDKF-NHVVGVVHTNYLEYIKREK 464 (604)
Q Consensus 389 ~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehL--Gwy~~G-arwt~Kf-~PVVgiyHTNY~eYary~~ 464 (604)
..... .. .......+.+.+...++|++|++....+ .+.... ....++. .|+|.+.|.....
T Consensus 54 ~~~~~--------~~-~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~------ 118 (366)
T cd03822 54 VRVIV--------LD-NPLDYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLH------ 118 (366)
T ss_pred eeeee--------cC-CchhHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCcc------
Confidence 00111 11 1122233556688899999999873211 111101 1111122 4999999997110
Q ss_pred cchhHHHHHHHHHHHHHHhhCCceeeCc-hhhhhccC----CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEE
Q 007438 465 NGALQAFFVKHINNWVTRAYCDKVLRLS-AATQDLPK----SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFL 538 (604)
Q Consensus 465 ~G~l~aplvR~~~r~~~r~yCdkVI~LS-~avq~l~k----s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFV 538 (604)
... ...+++.+.++. +||+||+.| ...+++.. ..+..| +||+...+.+.... ..........+++|+
T Consensus 119 ~~~---~~~~~~~~~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~ 191 (366)
T cd03822 119 EPR---PGDRALLRLLLR-RADAVIVMSSELLRALLLRAYPEKIAVIPHGVPDPPAEPPESL---KALGGLDGRPVLLTF 191 (366)
T ss_pred ccc---hhhhHHHHHHHh-cCCEEEEeeHHHHHHHHhhcCCCcEEEeCCCCcCcccCCchhh---HhhcCCCCCeEEEEE
Confidence 011 122334344445 899999995 55555432 233334 58887666554322 233334567889999
Q ss_pred eccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHH-----HHhcCC--cEEEcCC-CCCC
Q 007438 539 GKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSA-----AKRLDL--NLNFQKG-RDHA 598 (604)
Q Consensus 539 GRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~-----a~~LgL--~V~FtG~-ldha 598 (604)
|++...||++.|+++++.+....++++|+|+|+|++....... +.++++ +|+|+|. .+..
T Consensus 192 G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~ 259 (366)
T cd03822 192 GLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDE 259 (366)
T ss_pred eeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHH
Confidence 9999999999999999999888889999999999876655432 677777 8999987 6543
No 37
>PRK14098 glycogen synthase; Provisional
Probab=99.52 E-value=2.5e-13 Score=146.98 Aligned_cols=278 Identities=12% Similarity=0.072 Sum_probs=161.7
Q ss_pred CCceEEEEecCCCCcc--cchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccc-cCC----ceeCChhHHHHHHHH
Q 007438 308 KKRNVAIVTTASLPWM--TGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELV-YPN----VTFCSPEEQENYMRN 378 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWm--TGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~v-ypn----~rF~SpeeQe~~ir~ 378 (604)
+.|+|..+|+=.-||. -|.+ +-.|= .+|++.|| +|.+++|.|..-.+... .+. ..+..+-.. +. .
T Consensus 4 ~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp--~al~~~g~-~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~ 77 (489)
T PRK14098 4 RNFKVLYVSGEVSPFVRVSALADFMASFP--QALEEEGF-EARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKE--KT-D 77 (489)
T ss_pred CCcEEEEEeecchhhcccchHHHHHHHHH--HHHHHCCC-eEEEEcCCCCchhhhhhccccceEEEEEEEeecC--ee-E
Confidence 4599999999999994 4555 77777 88999999 99999999975321100 011 112110000 00 0
Q ss_pred HHHH-HhCCC-CCceeec--cCCcccccccCccCC------------------ccccccCC--CCCCcEEEEcCcchhhh
Q 007438 379 WLEE-RVGFK-ADFKISF--YPGKFSKERRSIIPA------------------GDTSQFIP--SKDADIAILEEPEHLNW 434 (604)
Q Consensus 379 wl~~-r~g~~-~~~~i~f--YPgry~a~~~SI~p~------------------gdI~r~L~--~f~pDVVHLeEPehLGw 434 (604)
++.- ..+.+ .++++.| +|.+|... .|+-- .-..+++. .++|||+|+++ -|-++
T Consensus 78 ~~~~~~~~~~~~~v~~~~~~~~~~f~r~--~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hd-w~t~l 154 (489)
T PRK14098 78 LLHVKVTALPSSKIQTYFLYNEKYFKRN--GLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHD-WYAGL 154 (489)
T ss_pred EEEEEEecccCCCceEEEEeCHHHcCCC--CcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecC-cHHHH
Confidence 0000 00111 1233322 33333322 11210 00112232 36899999998 55555
Q ss_pred hcchhh--h-----hcCCCcEEEEEEcChhhHHhhh-ccchhH-HHHHH---------HHHHHHHHhhCCceeeCchhhh
Q 007438 435 YHHGKR--W-----TDKFNHVVGVVHTNYLEYIKRE-KNGALQ-AFFVK---------HINNWVTRAYCDKVLRLSAATQ 496 (604)
Q Consensus 435 y~~Gar--w-----t~Kf~PVVgiyHTNY~eYary~-~~G~l~-aplvR---------~~~r~~~r~yCdkVI~LS~avq 496 (604)
...-.+ + ..+ .|+|.++|+.+.++.-.. ....+. ..... .+.+...+ +||+||+.|....
T Consensus 155 ~~~~l~~~~~~~~~~~~-~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~-~ad~VitVS~~~a 232 (489)
T PRK14098 155 VPLLLKTVYADHEFFKD-IKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVE-HADLLTTTSPRYA 232 (489)
T ss_pred HHHHHHHHhhhccccCC-CCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHH-hcCcceeeCHHHH
Confidence 422111 1 012 489999998764321100 000000 00001 12233334 9999999999776
Q ss_pred hccCC-----------------cceeE-EeecCCCCCCCccc-------------------hhhhhhccC--CCCceEEE
Q 007438 497 DLPKS-----------------VICNV-HGVNPKFLQIGEKV-------------------ATDREQGQQ--AFSKGAYF 537 (604)
Q Consensus 497 ~l~ks-----------------~V~nV-hGVdp~fF~pg~r~-------------------a~rr~~g~~--~~~KvvLF 537 (604)
+...+ .+..| .|||++.|+|.... ..+++.+.+ ++.+++.|
T Consensus 233 ~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~ 312 (489)
T PRK14098 233 EEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGV 312 (489)
T ss_pred HHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEE
Confidence 53221 12223 39999989875421 223334443 35679999
Q ss_pred EeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCC--HHHHHHHHHhcCCcEEEcCCCCCC
Q 007438 538 LGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGED--AYEVQSAAKRLDLNLNFQKGRDHA 598 (604)
Q Consensus 538 VGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPD--reeLk~~a~~LgL~V~FtG~ldha 598 (604)
||||.++||++.|++++.++.. .+++|+|+|+|+. +++|++++++++-+|.|+|..+..
T Consensus 313 vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~ 373 (489)
T PRK14098 313 IINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDA 373 (489)
T ss_pred eccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHH
Confidence 9999999999999999988864 3799999999995 589999998877689999987653
No 38
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.51 E-value=2.2e-13 Score=143.70 Aligned_cols=254 Identities=13% Similarity=0.112 Sum_probs=141.2
Q ss_pred Ccccchh--hhHHHHHHHHhhcCC-ceEEEEeecCCCCC--cccccCCceeCChhHHHHHHHHHHHHHhCCCCCceeecc
Q 007438 321 PWMTGTA--VNPLFRAAYLAKTEQ-QNVTLLVPWLCKSD--QELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFY 395 (604)
Q Consensus 321 PWmTGtA--VnpL~RAayLak~G~-~~VtL~vPWl~~~d--qe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~~i~fY 395 (604)
|..-|+. +.-|- .+|++.|| .+|+++++.++..+ .+ |+. .+.. ..-|++ -..+.++
T Consensus 23 p~~GG~~~~v~~La--~~L~~~G~~~~V~v~t~~~~~~~~~~~--~~~-~~~~-------------~~~gv~-v~r~~~~ 83 (439)
T TIGR02472 23 ADTGGQTKYVLELA--RALARRSEVEQVDLVTRLIKDAKVSPD--YAQ-PIER-------------IAPGAR-IVRLPFG 83 (439)
T ss_pred CCCCCcchHHHHHH--HHHHhCCCCcEEEEEeccccCcCCCCc--cCC-CeeE-------------eCCCcE-EEEecCC
Confidence 7778888 55555 89999987 69999987654321 11 110 0000 000110 0122233
Q ss_pred CCcccccccCccCC-----ccccccCCC--CCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChhhHHhh-hccc
Q 007438 396 PGKFSKERRSIIPA-----GDTSQFIPS--KDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYLEYIKR-EKNG 466 (604)
Q Consensus 396 Pgry~a~~~SI~p~-----gdI~r~L~~--f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~eYary-~~~G 466 (604)
|.++...... .+. ..+.+.+.+ .++||||++.+ +-++. +..+++.. .|+|.+.|......... ...|
T Consensus 84 ~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~DvIH~h~~-~~~~~--~~~~~~~~~~p~V~t~H~~~~~~~~~~~~~~ 159 (439)
T TIGR02472 84 PRRYLRKELL-WPYLDELADNLLQHLRQQGHLPDLIHAHYA-DAGYV--GARLSRLLGVPLIFTGHSLGREKRRRLLAAG 159 (439)
T ss_pred CCCCcChhhh-hhhHHHHHHHHHHHHHHcCCCCCEEEEcch-hHHHH--HHHHHHHhCCCEEEecccccchhhhhcccCC
Confidence 4333331111 111 234455654 36999999984 45555 33333333 39999999754321111 1111
Q ss_pred hhHHH-------HHH-HHHHHHHHhhCCceeeCchhh-hh-------ccCCcceeE-EeecCCCCCCCccch-------h
Q 007438 467 ALQAF-------FVK-HINNWVTRAYCDKVLRLSAAT-QD-------LPKSVICNV-HGVNPKFLQIGEKVA-------T 522 (604)
Q Consensus 467 ~l~ap-------lvR-~~~r~~~r~yCdkVI~LS~av-q~-------l~ks~V~nV-hGVdp~fF~pg~r~a-------~ 522 (604)
..... ..+ .+.++..+ .||+||+.|... ++ ++...|..| .|||++.|.+..... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~-~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~ 238 (439)
T TIGR02472 160 LKPQQIEKQYNISRRIEAEEETLA-HASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNL 238 (439)
T ss_pred CChhhhhhhcchHHHHHHHHHHHH-hCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHH
Confidence 11100 001 12233444 899999998642 22 122334444 499988887643211 1
Q ss_pred hhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCCCcEE-EEEecCCCHHH-----------HHHHHHhcCC--c
Q 007438 523 DREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKL-DVFGNGEDAYE-----------VQSAAKRLDL--N 588 (604)
Q Consensus 523 rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kL-dIVGDGPDree-----------Lk~~a~~LgL--~ 588 (604)
.+..+..++.++++|||||.+.||++.||++++.+.......++ .|+|+||++++ ++..+.++++ .
T Consensus 239 ~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 318 (439)
T TIGR02472 239 LAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGK 318 (439)
T ss_pred HHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCce
Confidence 12344456678999999999999999999999764221112333 36799997543 4456677788 7
Q ss_pred EEEcCCCCCC
Q 007438 589 LNFQKGRDHA 598 (604)
Q Consensus 589 V~FtG~ldha 598 (604)
|+|+|..+..
T Consensus 319 V~f~g~~~~~ 328 (439)
T TIGR02472 319 VAYPKHHRPD 328 (439)
T ss_pred EEecCCCCHH
Confidence 9999987643
No 39
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.51 E-value=3.2e-13 Score=132.64 Aligned_cols=168 Identities=20% Similarity=0.187 Sum_probs=118.0
Q ss_pred ccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCce
Q 007438 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkV 488 (604)
..+.+++.+.++|++|++++. .+|.. ..+.+.. .|+|.+.|..|.... +.+.+.+ .||+|
T Consensus 68 ~~l~~~~~~~~~dii~~~~~~-~~~~~--~~~~~~~~~~~i~~~h~~~~~~~---------------~~~~~~~-~~~~v 128 (355)
T cd03819 68 ARLRRLIREEKVDIVHARSRA-PAWSA--YLAARRTRPPFVTTVHGFYSVNF---------------RYNAIMA-RGDRV 128 (355)
T ss_pred HHHHHHHHHcCCCEEEECCCc-hhHHH--HHHHHhcCCCEEEEeCCchhhHH---------------HHHHHHH-hcCEE
Confidence 445667888999999999853 34542 2222232 499999997764321 1233334 79999
Q ss_pred eeCchhhhhccC-------CcceeE-EeecCCCCCCCccch-----hhhhhccCCCCceEEEEeccccccCHHHHHHHHH
Q 007438 489 LRLSAATQDLPK-------SVICNV-HGVNPKFLQIGEKVA-----TDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLA 555 (604)
Q Consensus 489 I~LS~avq~l~k-------s~V~nV-hGVdp~fF~pg~r~a-----~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~ 555 (604)
|+.|+...+... ..+..| .||++..|.+..... .+...+.+....+++|+||+...||++.|+++++
T Consensus 129 i~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~ 208 (355)
T cd03819 129 IAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALA 208 (355)
T ss_pred EEeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHH
Confidence 999987776432 223333 399988886543211 2333444667789999999999999999999999
Q ss_pred HhhccCCCcEEEEEecCCCHHHH----HHHHHhcCC--cEEEcCCCC
Q 007438 556 KHKNDLDGFKLDVFGNGEDAYEV----QSAAKRLDL--NLNFQKGRD 596 (604)
Q Consensus 556 ~v~~~~~~~kLdIVGDGPDreeL----k~~a~~LgL--~V~FtG~ld 596 (604)
.+....+++++.|+|+|++.+.+ ++.+.++++ +|.|+|..+
T Consensus 209 ~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 255 (355)
T cd03819 209 RLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCS 255 (355)
T ss_pred HHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcc
Confidence 98877788999999999987655 455667777 799999943
No 40
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.50 E-value=2.3e-13 Score=142.88 Aligned_cols=271 Identities=18% Similarity=0.169 Sum_probs=150.8
Q ss_pred eEEEEecCCCCc--ccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCc----eeCC-hhHHHHHHHHHHH
Q 007438 311 NVAIVTTASLPW--MTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNV----TFCS-PEEQENYMRNWLE 381 (604)
Q Consensus 311 ~IaIfTTAsLPW--mTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~----rF~S-peeQe~~ir~wl~ 381 (604)
+|.++|.=+.|| +-|.+ |.-|- ..|++.|| +|++++|.|....... +... .|.. ...+..+++-|-.
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~--~aL~~~G~-~V~Vi~p~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALP--KALAKLGH-DVRVIMPKYGRILDEL-RGQLLVLRLFGVPVGGRPEYVGVFEL 76 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHH--HHHHHCCC-eEEEEecCCcchhhHh-ccCeEEEEEEeeccCCceeEEEEEEE
Confidence 689999999999 66777 67776 88999999 9999999997422110 0110 0000 0001111111110
Q ss_pred HHhCCCCCceeeccCC--cc---------------cccccCccCCccccccCC--CCCCcEEEEcCcchhhhhcchhhhh
Q 007438 382 ERVGFKADFKISFYPG--KF---------------SKERRSIIPAGDTSQFIP--SKDADIAILEEPEHLNWYHHGKRWT 442 (604)
Q Consensus 382 ~r~g~~~~~~i~fYPg--ry---------------~a~~~SI~p~gdI~r~L~--~f~pDVVHLeEPehLGwy~~Garwt 442 (604)
. ...+++.+-+. .+ ...+.++|.. ...+++. ..+|||||+++ .|-+.........
T Consensus 77 ~----~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~-~~~~~l~~~~~~pDviH~hd-~~t~~~~~~l~~~ 150 (476)
T cd03791 77 P----VDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSR-AALELLRRLGWKPDIIHCHD-WHTGLVPALLKEK 150 (476)
T ss_pred E----eCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHH-HHHHHHHhcCCCCcEEEECc-hHHHHHHHHHHHh
Confidence 0 01122221110 00 0000010000 0111233 37899999998 4444432111111
Q ss_pred c-----CCCcEEEEEEcChhhHHhhhccchhHH----------------HHHHHHHHHHHHhhCCceeeCchhhhhccC-
Q 007438 443 D-----KFNHVVGVVHTNYLEYIKREKNGALQA----------------FFVKHINNWVTRAYCDKVLRLSAATQDLPK- 500 (604)
Q Consensus 443 ~-----Kf~PVVgiyHTNY~eYary~~~G~l~a----------------plvR~~~r~~~r~yCdkVI~LS~avq~l~k- 500 (604)
. .-.|+|.++|+...+. ..+...+.. +....+.+..++ +||+||+.|....+...
T Consensus 151 ~~~~~~~~~~~v~tiH~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ad~v~~vS~~~~~~i~~ 227 (476)
T cd03791 151 YADPFFKNIKTVFTIHNLAYQG--VFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIV-YADAVTTVSPTYAREILT 227 (476)
T ss_pred hccccCCCCCEEEEeCCCCCCC--CCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHH-hcCcCeecCHhHHHHhCC
Confidence 1 1149999999864211 111110000 000123344444 99999999986554221
Q ss_pred ---------------CcceeE-EeecCCCCCCCccc-------------------hhhhhhcc--CCCCceEEEEecccc
Q 007438 501 ---------------SVICNV-HGVNPKFLQIGEKV-------------------ATDREQGQ--QAFSKGAYFLGKMVW 543 (604)
Q Consensus 501 ---------------s~V~nV-hGVdp~fF~pg~r~-------------------a~rr~~g~--~~~~KvvLFVGRLvw 543 (604)
..+..| .|||.+.|.|.... ..+++.+. .++.++++|+|||..
T Consensus 228 ~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~ 307 (476)
T cd03791 228 PEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTE 307 (476)
T ss_pred CCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccc
Confidence 123333 39998888875322 12334454 367889999999999
Q ss_pred ccCHHHHHHHHHHhhccCCCcEEEEEecCCC--HHHHHHHHHhcCCcEEEcCCCC
Q 007438 544 AKGYRELIDLLAKHKNDLDGFKLDVFGNGED--AYEVQSAAKRLDLNLNFQKGRD 596 (604)
Q Consensus 544 EKGfD~LLdl~~~v~~~~~~~kLdIVGDGPD--reeLk~~a~~LgL~V~FtG~ld 596 (604)
+||++.|++++..+.+. +++|+|+|+|+. ++.+++.+.++.-++.|.+..+
T Consensus 308 ~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~ 360 (476)
T cd03791 308 QKGIDLLLEALPELLEL--GGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYD 360 (476)
T ss_pred cccHHHHHHHHHHHHHc--CcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCC
Confidence 99999999999887654 399999999975 4677777776544777766554
No 41
>PRK14099 glycogen synthase; Provisional
Probab=99.49 E-value=7.4e-13 Score=143.27 Aligned_cols=272 Identities=15% Similarity=0.127 Sum_probs=159.2
Q ss_pred CCceEEEEecCCCCcc--cchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCC----ceeCChhHHHHHHHHH
Q 007438 308 KKRNVAIVTTASLPWM--TGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN----VTFCSPEEQENYMRNW 379 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWm--TGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn----~rF~SpeeQe~~ir~w 379 (604)
++|+|..||+=..||. -|.| +-.|= .+|++.|| +|.+++|.|..-++. .++ ..+..+-.. +++-|
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp--~~l~~~g~-~v~v~~P~y~~~~~~--~~~~~~~~~~~~~~~~--~~~~~ 74 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALP--AALKAHGV-EVRTLVPGYPAVLAG--IEDAEQVHSFPDLFGG--PARLL 74 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHH--HHHHHCCC-cEEEEeCCCcchhhh--hcCceEEEEEeeeCCc--eEEEE
Confidence 4699999999999995 4566 77777 89999999 999999999643211 011 111110000 00000
Q ss_pred HHHHhCCCCCceeec--cCCccccc-----------------ccCccCC--cccccc-CCCCCCcEEEEcCcchhhhhcc
Q 007438 380 LEERVGFKADFKISF--YPGKFSKE-----------------RRSIIPA--GDTSQF-IPSKDADIAILEEPEHLNWYHH 437 (604)
Q Consensus 380 l~~r~g~~~~~~i~f--YPgry~a~-----------------~~SI~p~--gdI~r~-L~~f~pDVVHLeEPehLGwy~~ 437 (604)
. +..+++++.| .|..|... +.+.|-. -.+.+. +..++|||||.++ .|-++...
T Consensus 75 ~----~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hd-w~~~l~~~ 149 (485)
T PRK14099 75 A----ARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHD-WQAGLAPA 149 (485)
T ss_pred E----EEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECC-cHHHHHHH
Confidence 0 0001222221 13222111 1111100 011111 2468999999999 66666632
Q ss_pred hhhhhcCC-CcEEEEEEcC-hhhHH-h--hhccchhHHH----HHH-----HHHHHHHHhhCCceeeCchhhhhccC---
Q 007438 438 GKRWTDKF-NHVVGVVHTN-YLEYI-K--REKNGALQAF----FVK-----HINNWVTRAYCDKVLRLSAATQDLPK--- 500 (604)
Q Consensus 438 Garwt~Kf-~PVVgiyHTN-Y~eYa-r--y~~~G~l~ap----lvR-----~~~r~~~r~yCdkVI~LS~avq~l~k--- 500 (604)
-..+..+. .|+|.|+|.. |..+. . ....|.-... ... .+.++..+ +||+||+.|....+...
T Consensus 150 ~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~-~ad~vitVS~~~a~ei~~~~ 228 (485)
T PRK14099 150 YLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ-LADRITTVSPTYALEIQGPE 228 (485)
T ss_pred HHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHH-hcCeeeecChhHHHHHhccc
Confidence 12222222 3899999975 22110 0 0011110000 011 13355555 99999999998765321
Q ss_pred -------------CcceeE-EeecCCCCCCCcc-------------------chhhhhhccC--CCCceEEEEecccccc
Q 007438 501 -------------SVICNV-HGVNPKFLQIGEK-------------------VATDREQGQQ--AFSKGAYFLGKMVWAK 545 (604)
Q Consensus 501 -------------s~V~nV-hGVdp~fF~pg~r-------------------~a~rr~~g~~--~~~KvvLFVGRLvwEK 545 (604)
..+..| .|||++.|+|... ...+++.+.+ ++.+++++||||.++|
T Consensus 229 ~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~K 308 (485)
T PRK14099 229 AGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQK 308 (485)
T ss_pred CCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccc
Confidence 122233 3999999987532 2234455554 3467888999999999
Q ss_pred CHHHHHHHHHHhhccCCCcEEEEEecCCC--HHHHHHHHHhcCCcE-EEcCC
Q 007438 546 GYRELIDLLAKHKNDLDGFKLDVFGNGED--AYEVQSAAKRLDLNL-NFQKG 594 (604)
Q Consensus 546 GfD~LLdl~~~v~~~~~~~kLdIVGDGPD--reeLk~~a~~LgL~V-~FtG~ 594 (604)
|++.|++++..+.. .+++|+|+|+|+. ++++++++.+++..+ .|+|+
T Consensus 309 G~d~Li~A~~~l~~--~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~ 358 (485)
T PRK14099 309 GLDLLLEALPTLLG--EGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGY 358 (485)
T ss_pred cHHHHHHHHHHHHh--cCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 99999999988764 3689999999984 788998888766555 68887
No 42
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.47 E-value=7.9e-13 Score=126.23 Aligned_cols=246 Identities=15% Similarity=0.078 Sum_probs=156.6
Q ss_pred eEEEEecCCCCcccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCC
Q 007438 311 NVAIVTTASLPWMTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKA 388 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~ 388 (604)
+|++++..+-| .|+. +..|. .+|.+.|+ +|.++...-.. . +.. -+.+ .|
T Consensus 1 ~i~~i~~~~~~--gG~~~~~~~l~--~~l~~~~~-~v~~~~~~~~~---~-------~~~----------~~~~-~~--- 51 (365)
T cd03807 1 KVLHVITGLDV--GGAERMLVRLL--KGLDRDRF-EHVVISLTDRG---E-------LGE----------ELEE-AG--- 51 (365)
T ss_pred CeEEEEeeccC--ccHHHHHHHHH--HHhhhccc-eEEEEecCcch---h-------hhH----------HHHh-cC---
Confidence 58888888866 7777 66666 89988898 88877543210 0 000 0000 11
Q ss_pred CceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchh
Q 007438 389 DFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGAL 468 (604)
Q Consensus 389 ~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l 468 (604)
+++...+-... ...+..+..+.+++.+.++|++|...+. ...+.....+..+-.|+|.+.|..+.... + .
T Consensus 52 -i~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~div~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~-~ 121 (365)
T cd03807 52 -VPVYCLGKRPG--RPDPGALLRLYKLIRRLRPDVVHTWMYH-ADLYGGLAARLAGVPPVIWGIRHSDLDLG-----K-K 121 (365)
T ss_pred -CeEEEEecccc--cccHHHHHHHHHHHHhhCCCEEEecccc-ccHHHHHHHHhcCCCcEEEEecCCccccc-----c-h
Confidence 22221111000 1122233456667888999999998754 33332222233232588888888764421 1 1
Q ss_pred HHHHHHHHHHHHHHhhCCceeeCchhhhhccC------CcceeE-EeecCCCCCCCccc--hhhhhhccCCCCceEEEEe
Q 007438 469 QAFFVKHINNWVTRAYCDKVLRLSAATQDLPK------SVICNV-HGVNPKFLQIGEKV--ATDREQGQQAFSKGAYFLG 539 (604)
Q Consensus 469 ~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k------s~V~nV-hGVdp~fF~pg~r~--a~rr~~g~~~~~KvvLFVG 539 (604)
.....+++...+.. .++.+|+.|....+... ..+..+ +||+...|.+.... ..+.+.+.++....++|+|
T Consensus 122 ~~~~~~~~~~~~~~-~~~~~i~~s~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G 200 (365)
T cd03807 122 STRLVARLRRLLSS-FIPLIVANSAAAAEYHQAIGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDTFLIGIVA 200 (365)
T ss_pred hHhHHHHHHHHhcc-ccCeEEeccHHHHHHHHHcCCChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCCeEEEEec
Confidence 12244455555555 89998999987776432 122222 48887776654322 1223455566778899999
Q ss_pred ccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHH-hcCC--cEEEcCCCC
Q 007438 540 KMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAK-RLDL--NLNFQKGRD 596 (604)
Q Consensus 540 RLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~-~LgL--~V~FtG~ld 596 (604)
|+...||++.|++++..+....++++|.|+|+|++...++.... ++++ .+.|+|..+
T Consensus 201 ~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 260 (365)
T cd03807 201 RLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGERS 260 (365)
T ss_pred ccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEccccc
Confidence 99999999999999999887788899999999999999999887 7777 789999654
No 43
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.47 E-value=9.8e-13 Score=124.89 Aligned_cols=239 Identities=18% Similarity=0.175 Sum_probs=147.1
Q ss_pred eEEEEecCCCCcccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCC
Q 007438 311 NVAIVTTASLPWMTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKA 388 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~ 388 (604)
+|.++|+. ..|.+ +..|. .+|.+.|+ +|+++.+.-..... ....++
T Consensus 1 kIl~i~~~----~~g~~~~~~~l~--~~L~~~g~-~v~~~~~~~~~~~~-~~~~~~------------------------ 48 (359)
T cd03808 1 KILHIVTV----DGGLYSFRLPLI--KALRAAGY-EVHVVAPPGDELEE-LEALGV------------------------ 48 (359)
T ss_pred CeeEEEec----chhHHHHHHHHH--HHHHhcCC-eeEEEecCCCcccc-cccCCc------------------------
Confidence 47888888 34444 55555 89999999 99999765422210 000111
Q ss_pred CceeeccCCcc--cccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccc
Q 007438 389 DFKISFYPGKF--SKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNG 466 (604)
Q Consensus 389 ~~~i~fYPgry--~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G 466 (604)
.+..+|-.. ......+.....+.+.+.+.++||+|.+++ ..+++..-..+..+..++|...|.....+...
T Consensus 49 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---- 121 (359)
T cd03808 49 --KVIPIPLDRRGINPFKDLKALLRLYRLLRKERPDIVHTHTP-KPGILGRLAARLAGVPKVIYTVHGLGFVFTSG---- 121 (359)
T ss_pred --eEEeccccccccChHhHHHHHHHHHHHHHhcCCCEEEEccc-cchhHHHHHHHHcCCCCEEEEecCcchhhccc----
Confidence 111111000 000011112234566688899999999974 33333212222133347777777655332221
Q ss_pred hhHHHHHHHHHHHHHHhhCCceeeCchhhhhccC--Ccc---eeE----EeecCCCCCCCccchhhhhhccCCCCceEEE
Q 007438 467 ALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK--SVI---CNV----HGVNPKFLQIGEKVATDREQGQQAFSKGAYF 537 (604)
Q Consensus 467 ~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k--s~V---~nV----hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLF 537 (604)
.......+.+.+++.. .||.||+.|....+... ... .++ .|+++..+.+.... ......+++|
T Consensus 122 ~~~~~~~~~~~~~~~~-~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~ 193 (359)
T cd03808 122 GLKRRLYLLLERLALR-FTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP-------IPEDDPVFLF 193 (359)
T ss_pred hhHHHHHHHHHHHHHh-hccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc-------cCCCCcEEEE
Confidence 1133355556666666 88999999998777432 111 222 26666666543321 1345689999
Q ss_pred EeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHH-HHhcCC--cEEEcCCCC
Q 007438 538 LGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSA-AKRLDL--NLNFQKGRD 596 (604)
Q Consensus 538 VGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~-a~~LgL--~V~FtG~ld 596 (604)
+|++...||++.++++++.+....++++|.|+|+|++....+.. +.++++ .|.|+|..+
T Consensus 194 ~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 255 (359)
T cd03808 194 VARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRD 255 (359)
T ss_pred EeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccc
Confidence 99999999999999999998877789999999999999888765 555555 899999843
No 44
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.44 E-value=1.1e-12 Score=132.40 Aligned_cols=177 Identities=12% Similarity=0.069 Sum_probs=115.2
Q ss_pred ccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcC-hhhHHhhhccchhHHHHHHHHHHHHHHhhCCce
Q 007438 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTN-YLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTN-Y~eYary~~~G~l~aplvR~~~r~~~r~yCdkV 488 (604)
..+.+++.+.++||||++++..+ ......+..+...++.+.|.. +.++.. .++ ..+++ +.++...|++|
T Consensus 71 ~~l~~~l~~~~~Divh~~~~~~~--~~~~~~~~~~~~~~i~~~h~~~~~~~~~---~~~----~~~~~-~~~~~~~~~~~ 140 (374)
T TIGR03088 71 PQLYRLLRQLRPDIVHTRNLAAL--EAQLPAALAGVPARIHGEHGRDVFDLDG---SNW----KYRWL-RRLYRPLIHHY 140 (374)
T ss_pred HHHHHHHHHhCCCEEEEcchhHH--HHHHHHHhcCCCeEEEeecCcccccchh---hHH----HHHHH-HHHHHhcCCeE
Confidence 35667799999999999986433 211222333322223333321 111110 000 12223 33444579999
Q ss_pred eeCchhhhhccC-------CcceeE-EeecCCCCCCCccc--hhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhh
Q 007438 489 LRLSAATQDLPK-------SVICNV-HGVNPKFLQIGEKV--ATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHK 558 (604)
Q Consensus 489 I~LS~avq~l~k-------s~V~nV-hGVdp~fF~pg~r~--a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~ 558 (604)
|+.|..+++... ..+..| .||+++.|.+.... ....+........+++|+||+..+||++.|++++..+.
T Consensus 141 i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 141 VAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred EEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 999998777431 122333 49998888765322 11223334456779999999999999999999998886
Q ss_pred ccCC----CcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCC
Q 007438 559 NDLD----GFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRD 596 (604)
Q Consensus 559 ~~~~----~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ld 596 (604)
+..+ +++|+|+|+|++++++++.++++++ .+.|+|..+
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~ 264 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERD 264 (374)
T ss_pred HhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCcC
Confidence 5543 6899999999999999999999988 688999654
No 45
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.42 E-value=1e-12 Score=148.61 Aligned_cols=181 Identities=10% Similarity=-0.056 Sum_probs=121.1
Q ss_pred ccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcE-EEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCce
Q 007438 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHV-VGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PV-VgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkV 488 (604)
..+.++|++++|||||.+.+. -++++..+++..+ .|+ +.++|+.+..+.. +.. ....+.+++++....++.+
T Consensus 390 ~~L~~~lk~~kpDIVH~h~~~-a~~lg~lAa~~~g-vPvIv~t~h~~~~~~~~----~~~-~~~~~~l~~~l~~~~~~i~ 462 (694)
T PRK15179 390 TKLTDVMRSSVPSVVHIWQDG-SIFACALAALLAG-VPRIVLSVRTMPPVDRP----DRY-RVEYDIIYSELLKMRGVAL 462 (694)
T ss_pred HHHHHHHHHcCCcEEEEeCCc-HHHHHHHHHHHcC-CCEEEEEeCCCccccch----hHH-HHHHHHHHHHHHhcCCeEE
Confidence 457777999999999999843 3455333333344 365 4577876542111 000 1122234445555566677
Q ss_pred eeCchhhhh-cc------CCcceeE-EeecCCCCCCCccchhh-h--hhccCCCCceEEEEeccccccCHHHHHHHHHHh
Q 007438 489 LRLSAATQD-LP------KSVICNV-HGVNPKFLQIGEKVATD-R--EQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKH 557 (604)
Q Consensus 489 I~LS~avq~-l~------ks~V~nV-hGVdp~fF~pg~r~a~r-r--~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v 557 (604)
|+.|..+++ +. ...|..| .||++..|.+....... . ....+.+..++++||||.++||++.||++++.+
T Consensus 463 Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l 542 (694)
T PRK15179 463 SSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRF 542 (694)
T ss_pred EeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHH
Confidence 777775543 21 1234444 49998877653321111 1 111234466899999999999999999999988
Q ss_pred hccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCC
Q 007438 558 KNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDH 597 (604)
Q Consensus 558 ~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldh 597 (604)
.+..++++|+|+|+|++++.|++.+.++++ .|.|+|..++
T Consensus 543 ~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~d 584 (694)
T PRK15179 543 AASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLSRR 584 (694)
T ss_pred HHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCcch
Confidence 878889999999999999999999999999 8999999764
No 46
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.41 E-value=6.8e-12 Score=123.06 Aligned_cols=220 Identities=18% Similarity=0.114 Sum_probs=145.3
Q ss_pred ceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCC
Q 007438 310 RNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKAD 389 (604)
Q Consensus 310 r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~ 389 (604)
|+|.++++. +...|+......-|.+|.+.|| +|+++++-..
T Consensus 1 MkIl~~~~~--~~~gG~~~~~~~l~~~l~~~G~-~v~v~~~~~~------------------------------------ 41 (365)
T cd03825 1 MKVLHLNTS--DISGGAARAAYRLHRALQAAGV-DSTMLVQEKK------------------------------------ 41 (365)
T ss_pred CeEEEEecC--CCCCcHHHHHHHHHHHHHhcCC-ceeEEEeecc------------------------------------
Confidence 899999875 6779988666667799999999 9999954321
Q ss_pred ceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhh--cCCCcEEEEEEcChhhHHhh-----
Q 007438 390 FKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWT--DKFNHVVGVVHTNYLEYIKR----- 462 (604)
Q Consensus 390 ~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt--~Kf~PVVgiyHTNY~eYary----- 462 (604)
.+.+.+...++||||++.+.. +++....... ++ .|+|.++|..|....+.
T Consensus 42 ---------------------~~~~~~~~~~~diih~~~~~~-~~~~~~~~~~~~~~-~~~v~~~hd~~~~~~~~~~~~~ 98 (365)
T cd03825 42 ---------------------ALISKIEIINADIVHLHWIHG-GFLSIEDLSKLLDR-KPVVWTLHDMWPFTGGCHYPGG 98 (365)
T ss_pred ---------------------hhhhChhcccCCEEEEEcccc-CccCHHHHHHHHcC-CCEEEEcccCcccccccCCccc
Confidence 344557888999999987533 2221111111 13 48899999644211110
Q ss_pred ---h-c------cc------hhHHHHHHHHHHHHHHhhCCceeeCchhhhhccC-------CcceeE-EeecCCCCCCCc
Q 007438 463 ---E-K------NG------ALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK-------SVICNV-HGVNPKFLQIGE 518 (604)
Q Consensus 463 ---~-~------~G------~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k-------s~V~nV-hGVdp~fF~pg~ 518 (604)
+ . .. .+....++.....+. ...+.+|+.|..+++... ..+..| +||++..|.+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~ 177 (365)
T cd03825 99 CDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWA-DLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRD 177 (365)
T ss_pred cccccccCCCCCCCCCCCcccHHHHHHHHHHHHhc-cCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCc
Confidence 0 0 00 112223333322222 246678888887666432 223333 499988887776
Q ss_pred cchhhhhhccCCCCceEEEEecccc--ccCHHHHHHHHHHhhcc-CCCcEEEEEecCCCHHHHHHHHHhcCCcEEEcCCC
Q 007438 519 KVATDREQGQQAFSKGAYFLGKMVW--AKGYRELIDLLAKHKND-LDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGR 595 (604)
Q Consensus 519 r~a~rr~~g~~~~~KvvLFVGRLvw--EKGfD~LLdl~~~v~~~-~~~~kLdIVGDGPDreeLk~~a~~LgL~V~FtG~l 595 (604)
+...+...+.+....+++++|+... .||++.+++++..+... .+++++.|+|+|++.... .++..+.|+|..
T Consensus 178 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-----~~~~~v~~~g~~ 252 (365)
T cd03825 178 KREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-----DLPFPVHYLGSL 252 (365)
T ss_pred HHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-----cCCCceEecCCc
Confidence 6555556666667788888888877 89999999999887665 578999999999986553 234479999998
Q ss_pred CC
Q 007438 596 DH 597 (604)
Q Consensus 596 dh 597 (604)
++
T Consensus 253 ~~ 254 (365)
T cd03825 253 ND 254 (365)
T ss_pred CC
Confidence 74
No 47
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.41 E-value=3.2e-12 Score=122.92 Aligned_cols=243 Identities=16% Similarity=0.101 Sum_probs=143.6
Q ss_pred eEEEEecCCCCcccchh-hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCC-ceeCChhHHHHHHHHHHHHHhCCCC
Q 007438 311 NVAIVTTASLPWMTGTA-VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKA 388 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtA-VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn-~rF~SpeeQe~~ir~wl~~r~g~~~ 388 (604)
+|.++|..+.|.-+|-+ .-...-|.+|.+.|+ +|+++.|--..........+ ..+..+- .|. .
T Consensus 1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g~-~v~v~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-------~ 65 (359)
T cd03823 1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRGH-EVAVLTAGEDPPRQDKEVIGVVVYGRPI-------DEV-------L 65 (359)
T ss_pred CeeEEcccCCcccccchHHHHHHHHHHHHhcCC-ceEEEeCCCCCCCcccccccceeecccc-------ccc-------c
Confidence 58999999999866544 323233589999999 99999765432211110111 1111100 000 0
Q ss_pred CceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChhhHHhhhccch
Q 007438 389 DFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYLEYIKREKNGA 467 (604)
Q Consensus 389 ~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~eYary~~~G~ 467 (604)
........ +.......+.-...+.+++.++++|++|+..+..++... ..+.++. .|+|.++|-.+..+..
T Consensus 66 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~--~~~~~~~~~~~i~~~hd~~~~~~~------ 136 (359)
T cd03823 66 RSALPRDL-FHLSDYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSI--LRAARDRGIPIVLTLHDYWLICPR------ 136 (359)
T ss_pred CCCchhhh-hHHHhccCHHHHHHHHHHHHHcCCCEEEECCccchHHHH--HHHHHhcCCCEEEEEeeeeeecch------
Confidence 00000000 000001111112345566888999999999985555442 2222222 4889888854421111
Q ss_pred hHHHHHHHHHHHHHHhhCCceeeCchhhhhcc-C-----CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEec
Q 007438 468 LQAFFVKHINNWVTRAYCDKVLRLSAATQDLP-K-----SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGK 540 (604)
Q Consensus 468 l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~-k-----s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGR 540 (604)
...+ ....|.+|+.|....+.. + ..+..| +||++..+.+... ..+....+++|+|+
T Consensus 137 -----~~~~-----~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~-------~~~~~~~~i~~~G~ 199 (359)
T cd03823 137 -----QGLF-----KKGGDAVIAPSRFLLDRYVANGLFAEKISVIRNGIDLDRAKRPRR-------APPGGRLRFGFIGQ 199 (359)
T ss_pred -----hhhh-----ccCCCEEEEeCHHHHHHHHHcCCCccceEEecCCcChhhcccccc-------CCCCCceEEEEEec
Confidence 0111 112389999998777632 1 122222 4888777655432 22445678999999
Q ss_pred cccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCCcEEEcCCCCC
Q 007438 541 MVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDH 597 (604)
Q Consensus 541 LvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL~V~FtG~ldh 597 (604)
+...||++.|+++++.+.. ++++|+|+|+|++....+... .++-+|.|+|..+.
T Consensus 200 ~~~~k~~~~li~~~~~l~~--~~~~l~i~G~~~~~~~~~~~~-~~~~~v~~~g~~~~ 253 (359)
T cd03823 200 LTPHKGVDLLLEAFKRLPR--GDIELVIVGNGLELEEESYEL-EGDPRVEFLGAYPQ 253 (359)
T ss_pred CccccCHHHHHHHHHHHHh--cCcEEEEEcCchhhhHHHHhh-cCCCeEEEeCCCCH
Confidence 9999999999999988766 789999999999998887665 33338999999863
No 48
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.40 E-value=2.3e-12 Score=137.69 Aligned_cols=166 Identities=14% Similarity=0.188 Sum_probs=117.2
Q ss_pred CCCcEEEEcCcchhhhhcchhhhhcCCC-cEEEEEEcChhh-----HHhhh-ccchhHH---HHHHHHHHHHHHhhCCce
Q 007438 419 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-----YIKRE-KNGALQA---FFVKHINNWVTRAYCDKV 488 (604)
Q Consensus 419 f~pDVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyHTNY~e-----Yary~-~~G~l~a---plvR~~~r~~~r~yCdkV 488 (604)
.++||+|++++...|+. +...+++++ |+|.++|..|.. +.... ..+.... ...+.+.+.+.+ .||+|
T Consensus 172 ~~~dviH~~s~~~~g~~--~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLL--GALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQ-AADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHH--HHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHH-hCCEE
Confidence 36899999998766666 444444444 999999998752 11110 1111111 123334444444 99999
Q ss_pred eeCchhhhhccC------CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccC
Q 007438 489 LRLSAATQDLPK------SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDL 561 (604)
Q Consensus 489 I~LS~avq~l~k------s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~ 561 (604)
|++|...++... ..+..| .||++..|.+.... .......+++|+||+...||++.|+++++.+.+..
T Consensus 249 i~~s~~~~~~~~~~g~~~~ki~vIpNgid~~~f~~~~~~------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~ 322 (475)
T cd03813 249 TTLYEGNRERQIEDGADPEKIRVIPNGIDPERFAPARRA------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKI 322 (475)
T ss_pred EecCHHHHHHHHHcCCCHHHeEEeCCCcCHHHcCCcccc------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhC
Confidence 999998776431 123333 49998888764321 12345679999999999999999999999988888
Q ss_pred CCcEEEEEecCCC----HHHHHHHHHhcCC--cEEEcC
Q 007438 562 DGFKLDVFGNGED----AYEVQSAAKRLDL--NLNFQK 593 (604)
Q Consensus 562 ~~~kLdIVGDGPD----reeLk~~a~~LgL--~V~FtG 593 (604)
+++++.|+|+|++ .+++++.++++++ +|.|+|
T Consensus 323 p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G 360 (475)
T cd03813 323 PDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG 360 (475)
T ss_pred CCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC
Confidence 9999999999964 4678888999998 899999
No 49
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.40 E-value=6.4e-12 Score=130.30 Aligned_cols=159 Identities=15% Similarity=0.167 Sum_probs=113.9
Q ss_pred CCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceeeCchhh
Q 007438 416 IPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAAT 495 (604)
Q Consensus 416 L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~av 495 (604)
.+...+||+|+++. +.++..-..+..+ .++|.++|..|....- + .+++||++|...
T Consensus 95 ~~~~~~~vi~v~~~--~~~~~~~~~~~~~-~~~v~~~h~~~~~~~~--------------------~-~~~~ii~~S~~~ 150 (380)
T PRK15484 95 FTITKDSVIVIHNS--MKLYRQIRERAPQ-AKLVMHMHNAFEPELL--------------------D-KNAKIIVPSQFL 150 (380)
T ss_pred cCCCCCcEEEEeCc--HHhHHHHHhhCCC-CCEEEEEecccChhHh--------------------c-cCCEEEEcCHHH
Confidence 34456899999983 3444211112222 3778889976532111 1 468999999887
Q ss_pred hhcc-----CCcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEE
Q 007438 496 QDLP-----KSVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVF 569 (604)
Q Consensus 496 q~l~-----ks~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIV 569 (604)
++.. ...+..| +||+...|.+..+...+...+.+...++++|+|||..+||++.|+++++.+.+..++++|+|+
T Consensus 151 ~~~~~~~~~~~~i~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lviv 230 (380)
T PRK15484 151 KKFYEERLPNADISIVPNGFCLETYQSNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVV 230 (380)
T ss_pred HHHHHhhCCCCCEEEecCCCCHHHcCCcchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 7743 2334444 599988887755444455566666778999999999999999999999999888899999999
Q ss_pred ecCCCH---------HHHHHHHHhcCCcEEEcCCCCCC
Q 007438 570 GNGEDA---------YEVQSAAKRLDLNLNFQKGRDHA 598 (604)
Q Consensus 570 GDGPDr---------eeLk~~a~~LgL~V~FtG~ldha 598 (604)
|+|++. +.+++.+.+++..+.|+|.+++.
T Consensus 231 G~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~ 268 (380)
T PRK15484 231 GDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPE 268 (380)
T ss_pred eCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHH
Confidence 999853 36777777788899999998654
No 50
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.33 E-value=4.7e-11 Score=123.02 Aligned_cols=178 Identities=12% Similarity=0.108 Sum_probs=108.5
Q ss_pred CCCCCcEEEEcCcchhhhhcchhhhhcCC--CcEEEEEEcChhhHHhhh------ccchhHHHHHHH--HHHHHHHhhCC
Q 007438 417 PSKDADIAILEEPEHLNWYHHGKRWTDKF--NHVVGVVHTNYLEYIKRE------KNGALQAFFVKH--INNWVTRAYCD 486 (604)
Q Consensus 417 ~~f~pDVVHLeEPehLGwy~~Garwt~Kf--~PVVgiyHTNY~eYary~------~~G~l~aplvR~--~~r~~~r~yCd 486 (604)
..++|||||.+. +|- .+......+ .|+|+..|+-|....... .........++. .....+...||
T Consensus 84 ~~~~pdvi~~h~----~~~-~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 158 (396)
T cd03818 84 KGFRPDVIVAHP----GWG-ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQAD 158 (396)
T ss_pred cCCCCCEEEECC----ccc-hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCC
Confidence 567899999985 332 122222222 488888876553211100 011110111121 11234455899
Q ss_pred ceeeCchhhhhccC----CcceeE-EeecCCCCCCCccchhh--hhhccCCCCceEEEEec-cccccCHHHHHHHHHHhh
Q 007438 487 KVLRLSAATQDLPK----SVICNV-HGVNPKFLQIGEKVATD--REQGQQAFSKGAYFLGK-MVWAKGYRELIDLLAKHK 558 (604)
Q Consensus 487 kVI~LS~avq~l~k----s~V~nV-hGVdp~fF~pg~r~a~r--r~~g~~~~~KvvLFVGR-LvwEKGfD~LLdl~~~v~ 558 (604)
.||++|...++... ..+..| .|||.+.|.+....... ......+..++++|+|| +..+||++.|++++..+.
T Consensus 159 ~vi~~s~~~~~~~~~~~~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~ 238 (396)
T cd03818 159 AGVSPTRWQRSTFPAELRSRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLL 238 (396)
T ss_pred EEECCCHHHHhhCcHhhccceEEeCCCccccccCCCchhhhcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHH
Confidence 99999998877442 234444 49999999875432211 11122456788999998 999999999999999988
Q ss_pred ccCCCcEEEEEecCCC------------HHHHHHH-HHhcCC-cEEEcCCCCCCc
Q 007438 559 NDLDGFKLDVFGNGED------------AYEVQSA-AKRLDL-NLNFQKGRDHAD 599 (604)
Q Consensus 559 ~~~~~~kLdIVGDGPD------------reeLk~~-a~~LgL-~V~FtG~ldhad 599 (604)
+..++++|+|+|+|.. .+.+.+. ..+++. +|+|+|.+++.+
T Consensus 239 ~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~ 293 (396)
T cd03818 239 RARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQ 293 (396)
T ss_pred HHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHH
Confidence 8888999999998431 2222222 222234 799999987654
No 51
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.32 E-value=8.1e-12 Score=131.91 Aligned_cols=247 Identities=12% Similarity=0.170 Sum_probs=152.8
Q ss_pred ceEEEEecCCCCcccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCC
Q 007438 310 RNVAIVTTASLPWMTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFK 387 (604)
Q Consensus 310 r~IaIfTTAsLPWmTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~ 387 (604)
++|++++|-.+|.++||- |--|- +-|-++|| +|.+..=-|.+. . ++|.-| -|++
T Consensus 1 ~~i~mVsdff~P~~ggveshiy~lS--q~li~lgh-kVvvithayg~r--~----girylt---------------~glk 56 (426)
T KOG1111|consen 1 SRILMVSDFFYPSTGGVESHIYALS--QCLIRLGH-KVVVITHAYGNR--V----GIRYLT---------------NGLK 56 (426)
T ss_pred CcceeeCcccccCCCChhhhHHHhh--cchhhcCC-eEEEEeccccCc--c----ceeeec---------------CCce
Confidence 479999999999999998 66666 89999999 887763333211 0 134433 1121
Q ss_pred C-Ccee-eccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcc-hhhhhcCCC-cEEEEEEcChhhHHhhh
Q 007438 388 A-DFKI-SFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHH-GKRWTDKFN-HVVGVVHTNYLEYIKRE 463 (604)
Q Consensus 388 ~-~~~i-~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~-Garwt~Kf~-PVVgiyHTNY~eYary~ 463 (604)
- -+|+ +.|.+--.+--.+=+|+-+ ..+-.+++.|+|=++|| +-+.| +-..++-.+ -+|++-|-.|
T Consensus 57 Vyylp~~v~~n~tT~ptv~~~~Pllr--~i~lrE~I~ivhghs~f--S~lahe~l~hartMGlktVfTdHSlf------- 125 (426)
T KOG1111|consen 57 VYYLPAVVGYNQTTFPTVFSDFPLLR--PILLRERIEIVHGHSPF--SYLAHEALMHARTMGLKTVFTDHSLF------- 125 (426)
T ss_pred EEEEeeeeeecccchhhhhccCcccc--hhhhhhceEEEecCChH--HHHHHHHHHHHHhcCceEEEeccccc-------
Confidence 0 0111 1232222222222255433 22444466666666653 33322 222333333 4688888755
Q ss_pred ccchhHHHHHHHHHHHHHHhhCCceeeCchhhhh-------ccCCcceeE-EeecCCCCCCCccchhhhhhccCCCC-ce
Q 007438 464 KNGALQAFFVKHINNWVTRAYCDKVLRLSAATQD-------LPKSVICNV-HGVNPKFLQIGEKVATDREQGQQAFS-KG 534 (604)
Q Consensus 464 ~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~-------l~ks~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~-Kv 534 (604)
+++-+....+.++ -.+.-+..|++|+.|-+-++ +....|..| ..|+...|.|.+... ++.. .+
T Consensus 126 Gfad~~si~~n~l-l~~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~-------~S~~i~~ 197 (426)
T KOG1111|consen 126 GFADIGSILTNKL-LPLSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAADK-------PSADIIT 197 (426)
T ss_pred cccchhhhhhcce-eeeeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCcccc-------CCCCeeE
Confidence 2222222222221 11223356778877776555 111112222 266788888843221 1222 78
Q ss_pred EEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCCCc
Q 007438 535 AYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDHAD 599 (604)
Q Consensus 535 vLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldhad 599 (604)
+.++|||+|-||+|.|+++..++++.+|++++.|+||||-+..+++..+++.| +|.|+|.++|.+
T Consensus 198 ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~ 264 (426)
T KOG1111|consen 198 IVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDR 264 (426)
T ss_pred EEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHH
Confidence 99999999999999999999999999999999999999999999999999888 999999999975
No 52
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.28 E-value=7.1e-11 Score=118.27 Aligned_cols=161 Identities=16% Similarity=0.103 Sum_probs=104.8
Q ss_pred cccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcC-------hhhHHhhhccchh-----HHHHHHHHHHHH
Q 007438 413 SQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTN-------YLEYIKREKNGAL-----QAFFVKHINNWV 480 (604)
Q Consensus 413 ~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTN-------Y~eYary~~~G~l-----~aplvR~~~r~~ 480 (604)
.+.+...++|++|..++.. ..+ .. ...-.|.+..+|+. +..|....+.... ....++.+.+.+
T Consensus 76 ~~~~~~~~~D~v~~~~~~~-~~~---~~-~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (351)
T cd03804 76 IEQFDLSGYDLVISSSHAV-AKG---VI-TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRS 150 (351)
T ss_pred HHhccccCCCEEEEcCcHH-hcc---cc-CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHH
Confidence 3345667899999877422 222 11 22224778888874 2344443322211 112334444555
Q ss_pred HHhhCCceeeCchhhhhccC----CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHH
Q 007438 481 TRAYCDKVLRLSAATQDLPK----SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLA 555 (604)
Q Consensus 481 ~r~yCdkVI~LS~avq~l~k----s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~ 555 (604)
++ +||.||+.|...++... ..+..| -||+...|.+.. ...+.++|+||+.+.||++.|++++.
T Consensus 151 ~~-~~d~ii~~S~~~~~~~~~~~~~~~~vi~~~~d~~~~~~~~-----------~~~~~il~~G~~~~~K~~~~li~a~~ 218 (351)
T cd03804 151 AA-RVDYFIANSRFVARRIKKYYGRDATVIYPPVDTDRFTPAE-----------EKEDYYLSVGRLVPYKRIDLAIEAFN 218 (351)
T ss_pred hc-CCCEEEECCHHHHHHHHHHhCCCcEEECCCCCHhhcCcCC-----------CCCCEEEEEEcCccccChHHHHHHHH
Confidence 55 99999999998876432 122222 277766665432 23467999999999999999999997
Q ss_pred HhhccCCCcEEEEEecCCCHHHHHHHHHhcCCcEEEcCCCCCC
Q 007438 556 KHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHA 598 (604)
Q Consensus 556 ~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL~V~FtG~ldha 598 (604)
.+ + ++|+|+|+|++.+.+++.. .-+|+|+|++++.
T Consensus 219 ~~----~-~~l~ivG~g~~~~~l~~~~---~~~V~~~g~~~~~ 253 (351)
T cd03804 219 KL----G-KRLVVIGDGPELDRLRAKA---GPNVTFLGRVSDE 253 (351)
T ss_pred HC----C-CcEEEEECChhHHHHHhhc---CCCEEEecCCCHH
Confidence 65 2 7899999999999998822 2389999999764
No 53
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.23 E-value=1.1e-10 Score=133.63 Aligned_cols=173 Identities=11% Similarity=0.104 Sum_probs=110.8
Q ss_pred CCCcEEEEcCcchhhhhcchhhhhcCCC-cEEEEEEcChhhHHhhhccchhHH------HHHHHHH-HHHHHhhCCceee
Q 007438 419 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQA------FFVKHIN-NWVTRAYCDKVLR 490 (604)
Q Consensus 419 f~pDVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyHTNY~eYary~~~G~l~a------plvR~~~-r~~~r~yCdkVI~ 490 (604)
..|||||.+- ..=|+- |...+++++ |+|.++|+. +-.++-..|.... .....+. ...+...||.||+
T Consensus 384 ~~pDlIHahy-~d~glv--a~lla~~lgVP~v~t~HsL--~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IIt 458 (784)
T TIGR02470 384 GKPDLIIGNY-SDGNLV--ASLLARKLGVTQCTIAHAL--EKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIIT 458 (784)
T ss_pred CCCCEEEECC-CchHHH--HHHHHHhcCCCEEEECCcc--hhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEE
Confidence 3699999987 333344 555666666 999999987 2333322332111 1111121 3455668999999
Q ss_pred Cchhh--------hhcc-----------C--Ccc------eeE--EeecCCCCCCCccchhh------------------
Q 007438 491 LSAAT--------QDLP-----------K--SVI------CNV--HGVNPKFLQIGEKVATD------------------ 523 (604)
Q Consensus 491 LS~av--------q~l~-----------k--s~V------~nV--hGVdp~fF~pg~r~a~r------------------ 523 (604)
.|..- ..+. + .+| .+| -|||+..|.|......+
T Consensus 459 sT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~ 538 (784)
T TIGR02470 459 STYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDN 538 (784)
T ss_pred CcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhH
Confidence 99521 1110 0 011 122 29998877764432211
Q ss_pred -hhhcc--CCCCceEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCC------------HHHHHHHHHhcCC-
Q 007438 524 -REQGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGED------------AYEVQSAAKRLDL- 587 (604)
Q Consensus 524 -r~~g~--~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPD------------reeLk~~a~~LgL- 587 (604)
...|. .++.+++++||||...||++.|++++.++....++++|+|+|+|++ .+.|++.+.++++
T Consensus 539 ~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~ 618 (784)
T TIGR02470 539 DEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLH 618 (784)
T ss_pred HHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCC
Confidence 12222 4577899999999999999999999987654445689999999864 2467778889998
Q ss_pred -cEEEcCCCC
Q 007438 588 -NLNFQKGRD 596 (604)
Q Consensus 588 -~V~FtG~ld 596 (604)
.|.|+|...
T Consensus 619 g~V~flG~~~ 628 (784)
T TIGR02470 619 GQIRWIGAQL 628 (784)
T ss_pred CeEEEccCcC
Confidence 899999863
No 54
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.23 E-value=6.7e-11 Score=122.16 Aligned_cols=174 Identities=10% Similarity=0.127 Sum_probs=113.2
Q ss_pred ccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcC----hhhHHhhhcc--chh---HHHHHHHHHHHHHH
Q 007438 412 TSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTN----YLEYIKREKN--GAL---QAFFVKHINNWVTR 482 (604)
Q Consensus 412 I~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTN----Y~eYary~~~--G~l---~aplvR~~~r~~~r 482 (604)
+.+.+.+.++|+||+++ ..+++|... .+ .+ .|+|..+|.- |.+|...... .++ ....++.+-+.+++
T Consensus 96 l~~~~~~~~~D~v~~~~-~~~~~~~~~-~~-~~-~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 171 (397)
T TIGR03087 96 VNALLAAEPVDAIVVFS-SAMAQYVTP-HV-RG-VPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAA 171 (397)
T ss_pred HHHHHhhCCCCEEEEec-cccceeccc-cc-cC-CCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHh
Confidence 44568889999999998 455565211 11 12 4878777742 3344322111 111 12234456666776
Q ss_pred hhCCceeeCchhhhhccC-------CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHH---
Q 007438 483 AYCDKVLRLSAATQDLPK-------SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELI--- 551 (604)
Q Consensus 483 ~yCdkVI~LS~avq~l~k-------s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LL--- 551 (604)
.||.||+.|+..++..+ ..+..| +|||+.+|.+..... .....+.++++|+|||.+.||++.|+
T Consensus 172 -~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~----~~~~~~~~~ilf~G~l~~~k~~~~l~~~~ 246 (397)
T TIGR03087 172 -RFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYP----NPYPPGKRVLVFTGAMDYWPNIDAVVWFA 246 (397)
T ss_pred -hCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCcccc----CCCCCCCcEEEEEEecCCccCHHHHHHHH
Confidence 99999999998877432 223344 499999887653211 11123457899999999999999988
Q ss_pred -HHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCCcEEEcCCCCC
Q 007438 552 -DLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDH 597 (604)
Q Consensus 552 -dl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL~V~FtG~ldh 597 (604)
+++..+.+..++++|.|+|+||+. ++++.... -+|+|+|.++.
T Consensus 247 ~~~~~~l~~~~p~~~l~ivG~g~~~-~~~~l~~~--~~V~~~G~v~~ 290 (397)
T TIGR03087 247 ERVFPAVRARRPAAEFYIVGAKPSP-AVRALAAL--PGVTVTGSVAD 290 (397)
T ss_pred HHHHHHHHHHCCCcEEEEECCCChH-HHHHhccC--CCeEEeeecCC
Confidence 556666666789999999999974 45554321 26899999874
No 55
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.23 E-value=2.3e-10 Score=134.01 Aligned_cols=176 Identities=11% Similarity=0.051 Sum_probs=113.6
Q ss_pred CCcEEEEcCcchhhhhcchhhhhcCCC-cEEEEEEcChhhHHhh-hccchhH--------HHHHHHHHHHHHHhhCCcee
Q 007438 420 DADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKR-EKNGALQ--------AFFVKHINNWVTRAYCDKVL 489 (604)
Q Consensus 420 ~pDVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyHTNY~eYary-~~~G~l~--------aplvR~~~r~~~r~yCdkVI 489 (604)
.|||||.+- .+-|+- |...+..++ |+|.++|+.-.+...+ ...|... ....+.-.-+.+...++.||
T Consensus 310 ~pDvIHaHy-w~sG~a--a~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VI 386 (1050)
T TIGR02468 310 WPYVIHGHY-ADAGDS--AALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVI 386 (1050)
T ss_pred CCCEEEECc-chHHHH--HHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEE
Confidence 389999996 444444 555666655 9999999853322211 1122210 11122222344455999999
Q ss_pred eCchhhhhc--------c-----------CC----------cceeE-EeecCCCCCCCccchh-----------------
Q 007438 490 RLSAATQDL--------P-----------KS----------VICNV-HGVNPKFLQIGEKVAT----------------- 522 (604)
Q Consensus 490 ~LS~avq~l--------~-----------ks----------~V~nV-hGVdp~fF~pg~r~a~----------------- 522 (604)
+.|....+- . +. .|..| -|||+..|.|.+....
T Consensus 387 asT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~ 466 (1050)
T TIGR02468 387 TSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPI 466 (1050)
T ss_pred EeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchh
Confidence 999866651 0 00 12233 2999888887532211
Q ss_pred ---hhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhcc--CCCcEEEEEecCCCH-----------HHHHHHHHhcC
Q 007438 523 ---DREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKND--LDGFKLDVFGNGEDA-----------YEVQSAAKRLD 586 (604)
Q Consensus 523 ---rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~--~~~~kLdIVGDGPDr-----------eeLk~~a~~Lg 586 (604)
.+.....+..++++|||||..+||++.||+++..+... .+++. .|+|+|++. .+|++++.+++
T Consensus 467 ~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lg 545 (1050)
T TIGR02468 467 WSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYD 545 (1050)
T ss_pred hHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhC
Confidence 11223356778999999999999999999999887542 34555 577998864 45778889999
Q ss_pred C--cEEEcCCCCCCc
Q 007438 587 L--NLNFQKGRDHAD 599 (604)
Q Consensus 587 L--~V~FtG~ldhad 599 (604)
+ .|.|+|..++.+
T Consensus 546 L~g~V~FlG~v~~ed 560 (1050)
T TIGR02468 546 LYGQVAYPKHHKQSD 560 (1050)
T ss_pred CCCeEEecCCCCHHH
Confidence 9 899999876543
No 56
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.22 E-value=9.4e-11 Score=127.97 Aligned_cols=162 Identities=14% Similarity=0.184 Sum_probs=106.7
Q ss_pred CCCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChhhHHhhhccc--hhHHHHHHHHHHHHHHhhCCceeeCch
Q 007438 417 PSKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYLEYIKREKNG--ALQAFFVKHINNWVTRAYCDKVLRLSA 493 (604)
Q Consensus 417 ~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~eYary~~~G--~l~aplvR~~~r~~~r~yCdkVI~LS~ 493 (604)
...++||+|+.-|...+|-- ...+. .|+|.+.|.+- |......+ .+......+. .-....||.||++|+
T Consensus 208 ~~~~~di~i~dr~~~~~~~~----~~~~~~~~~v~~lH~~h--~~~~~~~~~~~~~~~~y~~~--~~~~~~~D~iI~~S~ 279 (500)
T TIGR02918 208 NLTKKDIIILDRSTGIGQAV----LENKGPAKLGVVVHAEH--FSESATNETYILWNNYYEYQ--FSNADYIDFFITATD 279 (500)
T ss_pred hCCCCCEEEEcCCcccchHH----HhcCCCceEEEEEChhh--hcCccCcchhHHHHHHHHHH--HhchhhCCEEEECCH
Confidence 34578999999888766551 12221 37888888744 22211111 1111111111 111347999999998
Q ss_pred hhhhc-----cCC--cceeE----EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCC
Q 007438 494 ATQDL-----PKS--VICNV----HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLD 562 (604)
Q Consensus 494 avq~l-----~ks--~V~nV----hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~ 562 (604)
..++. .+. ...+| .|+...++.+.. ......++|+|||.++||++.||+++..+.+..+
T Consensus 280 ~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~~----------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p 349 (500)
T TIGR02918 280 IQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPEQ----------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVP 349 (500)
T ss_pred HHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCccc----------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCC
Confidence 65442 111 11233 355544443211 1234689999999999999999999999988889
Q ss_pred CcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCC
Q 007438 563 GFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRD 596 (604)
Q Consensus 563 ~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ld 596 (604)
+++|+|||+||+++.|++.+.++++ .|.|+|..+
T Consensus 350 ~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~~ 385 (500)
T TIGR02918 350 ELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHRN 385 (500)
T ss_pred CeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCCC
Confidence 9999999999999999999999988 799999764
No 57
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.21 E-value=3e-11 Score=134.14 Aligned_cols=185 Identities=12% Similarity=-0.020 Sum_probs=122.8
Q ss_pred CccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcE-EEEEEcChhhHHhhhccchhHHHHHHHHHH-HHHH
Q 007438 405 SIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHV-VGVVHTNYLEYIKREKNGALQAFFVKHINN-WVTR 482 (604)
Q Consensus 405 SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PV-VgiyHTNY~eYary~~~G~l~aplvR~~~r-~~~r 482 (604)
.|+.+..+..+|++++|||||.+. ..-+.++..++|..+ .|| |++.|..|+.-.+ ....+-+..+.+ .++.
T Consensus 265 ~~~~~~~l~~~ir~~rpDIVHt~~-~~a~l~g~laA~lag-vpviv~~~h~~~~~~~~-----r~~~~e~~~~~~a~~i~ 337 (578)
T PRK15490 265 CKYGIKHLVPHLCERKLDYLSVWQ-DGACLMIALAALIAG-VPRIQLGLRGLPPVVRK-----RLFKPEYEPLYQALAVV 337 (578)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcC-cccHHHHHHHHHhcC-CCEEEEeecccCCcchh-----hHHHHHHHHhhhhceeE
Confidence 345556778889999999999998 444444433444445 466 5667773332111 111111111222 2324
Q ss_pred hhCCceeeCchhhhhc-------cCCcceeE-EeecCCCCCCCccch--hhh--hhccCCCCceEEEEeccccccCHHHH
Q 007438 483 AYCDKVLRLSAATQDL-------PKSVICNV-HGVNPKFLQIGEKVA--TDR--EQGQQAFSKGAYFLGKMVWAKGYREL 550 (604)
Q Consensus 483 ~yCdkVI~LS~avq~l-------~ks~V~nV-hGVdp~fF~pg~r~a--~rr--~~g~~~~~KvvLFVGRLvwEKGfD~L 550 (604)
..|| +|+.|..+.+. +...|..| .||++..|.+..... .+. ..+.++...++.+|||+..+||...+
T Consensus 338 ~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~L 416 (578)
T PRK15490 338 PGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAW 416 (578)
T ss_pred ecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHH
Confidence 4666 66777765552 12233444 399988887743211 111 12234556789999999999999999
Q ss_pred HHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCC
Q 007438 551 IDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDH 597 (604)
Q Consensus 551 Ldl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldh 597 (604)
|+++.++.+..++++|+|+|+||++++|++.++++++ +|.|+|..+.
T Consensus 417 I~A~a~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~~D 465 (578)
T PRK15490 417 IDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRD 465 (578)
T ss_pred HHHHHHHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCChhh
Confidence 9999888777789999999999999999999999998 7999998654
No 58
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.17 E-value=5.4e-10 Score=116.72 Aligned_cols=169 Identities=12% Similarity=0.018 Sum_probs=110.4
Q ss_pred cccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChh-hHHhhhccchhHHHHHHHHHHHHHHhhCCcee
Q 007438 411 DTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYL-EYIKREKNGALQAFFVKHINNWVTRAYCDKVL 489 (604)
Q Consensus 411 dI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~-eYary~~~G~l~aplvR~~~r~~~r~yCdkVI 489 (604)
.+.++|+.++||++|+++.+. |..........-.|+|.+.|.... .+..+ ...+++.+++.+ .||.||
T Consensus 115 ~~~~~l~~~~Pd~v~~~~~~~--~~~~l~~~~~~~ip~vl~~~~~~~~s~~~~--------~~~~~~~r~~~~-~~d~ii 183 (425)
T PRK05749 115 AVRRFLRFWRPKLVIIMETEL--WPNLIAELKRRGIPLVLANARLSERSFKRY--------QKFKRFYRLLFK-NIDLVL 183 (425)
T ss_pred HHHHHHHhhCCCEEEEEecch--hHHHHHHHHHCCCCEEEEeccCChhhHHHH--------HHHHHHHHHHHH-hCCEEE
Confidence 477779999999999886542 432222222221488877776544 33332 123445566655 899999
Q ss_pred eCchhhhhcc-CCccee-EE---eecCCCCC-CCc---cchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhcc
Q 007438 490 RLSAATQDLP-KSVICN-VH---GVNPKFLQ-IGE---KVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKND 560 (604)
Q Consensus 490 ~LS~avq~l~-ks~V~n-Vh---GVdp~fF~-pg~---r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~ 560 (604)
+.|+.+++.. +.++.+ |+ +++.+.+. +.. ....+...+ +..++++|+|+ ++|+.+.|+++++++.+.
T Consensus 184 ~~S~~~~~~l~~~g~~~~i~vi~n~~~d~~~~~~~~~~~~~~r~~~~--~~~~vil~~~~--~~~~~~~ll~A~~~l~~~ 259 (425)
T PRK05749 184 AQSEEDAERFLALGAKNEVTVTGNLKFDIEVPPELAARAATLRRQLA--PNRPVWIAAST--HEGEEELVLDAHRALLKQ 259 (425)
T ss_pred ECCHHHHHHHHHcCCCCCcEecccccccCCCChhhHHHHHHHHHHhc--CCCcEEEEeCC--CchHHHHHHHHHHHHHHh
Confidence 9999888743 223222 32 22222221 111 111122232 45678899986 589999999999988777
Q ss_pred CCCcEEEEEecCCCH-HHHHHHHHhcCC-cEEEcCC
Q 007438 561 LDGFKLDVFGNGEDA-YEVQSAAKRLDL-NLNFQKG 594 (604)
Q Consensus 561 ~~~~kLdIVGDGPDr-eeLk~~a~~LgL-~V~FtG~ 594 (604)
.++++|+|+|+||++ ++++++++++|+ .+.|.|.
T Consensus 260 ~~~~~liivG~g~~r~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 260 FPNLLLILVPRHPERFKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred CCCcEEEEcCCChhhHHHHHHHHHhCCCcEEEccCC
Confidence 789999999999997 899999999999 6777774
No 59
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.13 E-value=3.9e-10 Score=119.26 Aligned_cols=116 Identities=16% Similarity=0.107 Sum_probs=86.6
Q ss_pred HHHHHHHhhCCceeeCchhhhhccC----C--cceeEE-eecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHH
Q 007438 476 INNWVTRAYCDKVLRLSAATQDLPK----S--VICNVH-GVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYR 548 (604)
Q Consensus 476 ~~r~~~r~yCdkVI~LS~avq~l~k----s--~V~nVh-GVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD 548 (604)
+..++.+ .||.||+.|..+++..+ . .+..|+ ||+...|.+... ......++++||||+.++||++
T Consensus 182 ~~~~~~~-~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~-------~~~~~~~~il~vgr~~~~K~~~ 253 (419)
T cd03806 182 LYGLAGS-FADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPL-------DEKTRENQILSIAQFRPEKNHP 253 (419)
T ss_pred HHHHHhh-cCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhccccc-------ccccCCcEEEEEEeecCCCCHH
Confidence 4444444 99999999987776322 1 233443 888666654332 1123467899999999999999
Q ss_pred HHHHHHHHhhccCC-----CcEEEEEecCCC------HHHHHHHHHhcCC--cEEEcCCCCCCc
Q 007438 549 ELIDLLAKHKNDLD-----GFKLDVFGNGED------AYEVQSAAKRLDL--NLNFQKGRDHAD 599 (604)
Q Consensus 549 ~LLdl~~~v~~~~~-----~~kLdIVGDGPD------reeLk~~a~~LgL--~V~FtG~ldhad 599 (604)
.+|++++++.+..+ +++|+|+|+|++ .++|++++.++++ .|.|+|..++.+
T Consensus 254 ~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~ 317 (419)
T cd03806 254 LQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEE 317 (419)
T ss_pred HHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHH
Confidence 99999999877654 499999999853 5789999999999 799999886543
No 60
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.12 E-value=2e-10 Score=114.69 Aligned_cols=162 Identities=16% Similarity=0.092 Sum_probs=106.6
Q ss_pred cccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceee
Q 007438 411 DTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLR 490 (604)
Q Consensus 411 dI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~ 490 (604)
.+.+++++++|||||.+.+.. ++...-+++..+ .|+|..+|+.+. ...++++.+ +||+||+
T Consensus 80 ~~~~~i~~~~pDvI~~~~~~~-~~~~~~~a~~~~-~p~v~~~~~~~~----------------~~~~~~~~~-~~~~vi~ 140 (350)
T cd03785 80 QARKILKKFKPDVVVGFGGYV-SGPVGLAAKLLG-IPLVIHEQNAVP----------------GLANRLLAR-FADRVAL 140 (350)
T ss_pred HHHHHHHhcCCCEEEECCCCc-chHHHHHHHHhC-CCEEEEcCCCCc----------------cHHHHHHHH-hhCEEEE
Confidence 456678999999999988644 554222333333 487754444321 122333333 7999999
Q ss_pred Cchhhhhc-cCCcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHH-HHHHHHhhccCCCcE-E
Q 007438 491 LSAATQDL-PKSVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYREL-IDLLAKHKNDLDGFK-L 566 (604)
Q Consensus 491 LS~avq~l-~ks~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~L-Ldl~~~v~~~~~~~k-L 566 (604)
+|+...++ +...+..+ .||+..++.+... +...+.+++.++++++|+....||++.+ +++++.+.. ++++ +
T Consensus 141 ~s~~~~~~~~~~~~~~i~n~v~~~~~~~~~~---~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~ 215 (350)
T cd03785 141 SFPETAKYFPKDKAVVTGNPVREEILALDRE---RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVI 215 (350)
T ss_pred cchhhhhcCCCCcEEEECCCCchHHhhhhhh---HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEE
Confidence 99988774 22222222 3777777655322 3445556677889999988888888765 478777653 3555 6
Q ss_pred EEEecCCCHHHHHHHHHhcCCcEEEcCCCCC
Q 007438 567 DVFGNGEDAYEVQSAAKRLDLNLNFQKGRDH 597 (604)
Q Consensus 567 dIVGDGPDreeLk~~a~~LgL~V~FtG~ldh 597 (604)
.|+|+| +.+++++.+++++-++.|.|+++.
T Consensus 216 ~i~G~g-~~~~l~~~~~~~~~~v~~~g~~~~ 245 (350)
T cd03785 216 HQTGKG-DLEEVKKAYEELGVNYEVFPFIDD 245 (350)
T ss_pred EEcCCc-cHHHHHHHHhccCCCeEEeehhhh
Confidence 689999 778899998876448999998743
No 61
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.10 E-value=1.9e-09 Score=97.53 Aligned_cols=167 Identities=20% Similarity=0.153 Sum_probs=120.3
Q ss_pred EEEEecCCCCcccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCC
Q 007438 312 VAIVTTASLPWMTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKAD 389 (604)
Q Consensus 312 IaIfTTAsLPWmTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~ 389 (604)
|.++++...|-..|.. ...|. .+|++.|+ +|+++.
T Consensus 1 i~~i~~~~~~~~~G~~~~~~~l~--~~L~~~g~-~v~v~~---------------------------------------- 37 (229)
T cd01635 1 ILLVSTPLLPGGGGVELVLLDLA--KALARRGH-EVEVVA---------------------------------------- 37 (229)
T ss_pred CeeeccccCCCCCCchhHHHHHH--HHHHHcCC-eEEEEE----------------------------------------
Confidence 5678888888788888 45554 99999999 999885
Q ss_pred ceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhH
Q 007438 390 FKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQ 469 (604)
Q Consensus 390 ~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~ 469 (604)
.....+..++...++|++|++++....+...-..+..+ .|++.+.|..+..+......
T Consensus 38 -----------------~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~-~~~i~~~h~~~~~~~~~~~~---- 95 (229)
T cd01635 38 -----------------LLLLLLLRILRGFKPDVVHAHGYYPAPLALLLAARLLG-IPLVLTVHGVNRSLLEGVPL---- 95 (229)
T ss_pred -----------------echHHHHHHHhhcCCCEEEEcCCCcHHHHHHHHHhhCC-CCEEEEEcCccHhhcccCcH----
Confidence 00111233345678999999998888776411122222 59999999999765543211
Q ss_pred HHHHHHHHHHHHHhhCCceeeCchhhhhccCCcceeEEeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHH
Q 007438 470 AFFVKHINNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRE 549 (604)
Q Consensus 470 aplvR~~~r~~~r~yCdkVI~LS~avq~l~ks~V~nVhGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~ 549 (604)
.+...... .|+.+ |+|++...||++.
T Consensus 96 -----~~~~~~~~-~~~~~------------------------------------------------~~g~~~~~k~~~~ 121 (229)
T cd01635 96 -----SLLALSIG-LADKV------------------------------------------------FVGRLAPEKGLDD 121 (229)
T ss_pred -----HHHHHHHh-hcceE------------------------------------------------EEEeecccCCHHH
Confidence 11111212 33322 9999999999999
Q ss_pred HHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCC
Q 007438 550 LIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDH 597 (604)
Q Consensus 550 LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldh 597 (604)
+++++..+.+..+++++.|+|.|++....+..+.+++. ++.|+|....
T Consensus 122 ~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 171 (229)
T cd01635 122 LIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDP 171 (229)
T ss_pred HHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCc
Confidence 99999999887789999999999999999886666666 8999998743
No 62
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.10 E-value=7.6e-10 Score=111.50 Aligned_cols=165 Identities=16% Similarity=0.163 Sum_probs=110.6
Q ss_pred CCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceeeCchhhhhc
Q 007438 419 KDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDL 498 (604)
Q Consensus 419 f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l 498 (604)
.++||+|++.|....+. ....... .++|.++|++..........+.+.. ..+++-.. ...+|.||++|...++.
T Consensus 98 ~~~diii~~~~~~~~~~--~~~~~~~-~~~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~d~ii~~s~~~~~~ 171 (372)
T cd04949 98 TKPDVFILDRPTLDGQA--LLNMKKA-AKVVVVLHSNHVSDNNDPVHSLINN-FYEYVFEN--LDKVDGVIVATEQQKQD 171 (372)
T ss_pred CCCCEEEECCccccchh--HHhccCC-ceEEEEEChHHhCCcccccccccch-hhHHHHhC--hhhCCEEEEccHHHHHH
Confidence 56899999998877762 2222222 3578889976532222111111111 11221111 23789999999877653
Q ss_pred cC------CcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEec
Q 007438 499 PK------SVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGN 571 (604)
Q Consensus 499 ~k------s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGD 571 (604)
.. ..|..| .|++...+.+.. ........++|+||+..+||++.||+++.++....++++|+|+|+
T Consensus 172 l~~~~~~~~~v~~ip~g~~~~~~~~~~--------~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~ 243 (372)
T cd04949 172 LQKQFGNYNPIYTIPVGSIDPLKLPAQ--------FKQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGY 243 (372)
T ss_pred HHHHhCCCCceEEEcccccChhhcccc--------hhhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 21 113333 377766655432 112345679999999999999999999999988889999999999
Q ss_pred CCCHHHHHHHHHhcCC--cEEEcCCCCC
Q 007438 572 GEDAYEVQSAAKRLDL--NLNFQKGRDH 597 (604)
Q Consensus 572 GPDreeLk~~a~~LgL--~V~FtG~ldh 597 (604)
|++...++..+.++++ .|.|+|..+.
T Consensus 244 g~~~~~~~~~~~~~~~~~~v~~~g~~~~ 271 (372)
T cd04949 244 GDEEEKLKELIEELGLEDYVFLKGYTRD 271 (372)
T ss_pred CchHHHHHHHHHHcCCcceEEEcCCCCC
Confidence 9999999999998888 7999996543
No 63
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.08 E-value=4.3e-10 Score=115.36 Aligned_cols=247 Identities=13% Similarity=0.023 Sum_probs=143.6
Q ss_pred CCceEEEEecCCCCcccchh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHH-----HHHHH
Q 007438 308 KKRNVAIVTTASLPWMTGTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENY-----MRNWL 380 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~-----ir~wl 380 (604)
..|+|.|+|+++ -+|.. .+-|- +.|++.|+ .|.+++|-+.... |.+. .-....| ...|+
T Consensus 3 ~~~rili~t~~~---G~GH~~~a~al~--~~l~~~g~-~~~~~~d~~~~~~-----~~~~---~~~~~~y~~~~~~~~~~ 68 (380)
T PRK13609 3 KNPKVLILTAHY---GNGHVQVAKTLE--QTFRQKGI-KDVIVCDLFGESH-----PVIT---EITKYLYLKSYTIGKEL 68 (380)
T ss_pred CCCeEEEEEcCC---CchHHHHHHHHH--HHHHhcCC-CcEEEEEhHHhcc-----hHHH---HHHHHHHHHHHHHhHHH
Confidence 468999999987 33444 77776 88999998 5777778774221 2100 0001111 11222
Q ss_pred HHHhCCCCCceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChhhH
Q 007438 381 EERVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYLEY 459 (604)
Q Consensus 381 ~~r~g~~~~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~eY 459 (604)
-.-.- ...-.+++.+.... ...+....+.++|++++||+||...|...... . ..+.+. .|++ ..+|+|.
T Consensus 69 ~~~~~---~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~--~-~~~~~~~ip~~-~~~td~~-- 138 (380)
T PRK13609 69 YRLFY---YGVEKIYDKKIFSW-YANFGRKRLKLLLQAEKPDIVINTFPIIAVPE--L-KKQTGISIPTY-NVLTDFC-- 138 (380)
T ss_pred HHHHH---hccCcccchHHHHH-HHHHHHHHHHHHHHHhCcCEEEEcChHHHHHH--H-HHhcCCCCCeE-EEeCCCC--
Confidence 11000 00000111111110 11122356788899999999999988653221 2 222333 3866 4556651
Q ss_pred HhhhccchhHHHHHHHHHHHHHHhhCCceeeCchhhhhcc-CCcc--ee--EEeecC-CCCC-CCccchhhhhhccCCCC
Q 007438 460 IKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLP-KSVI--CN--VHGVNP-KFLQ-IGEKVATDREQGQQAFS 532 (604)
Q Consensus 460 ary~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~-ks~V--~n--VhGVdp-~fF~-pg~r~a~rr~~g~~~~~ 532 (604)
.+ +.|+.+ .||+++++|+..++.. +.++ .+ |+|++. ..|. +.++...+.+++.+++.
T Consensus 139 ~~---------------~~~~~~-~ad~i~~~s~~~~~~l~~~gi~~~ki~v~G~p~~~~f~~~~~~~~~~~~~~l~~~~ 202 (380)
T PRK13609 139 LH---------------KIWVHR-EVDRYFVATDHVKKVLVDIGVPPEQVVETGIPIRSSFELKINPDIIYNKYQLCPNK 202 (380)
T ss_pred CC---------------cccccC-CCCEEEECCHHHHHHHHHcCCChhHEEEECcccChHHcCcCCHHHHHHHcCCCCCC
Confidence 11 123444 8999999999877643 2222 22 358774 3343 22333345556666555
Q ss_pred c-eEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEec--CCCHHHHHHHHHhcCCcEEEcCCCCCC
Q 007438 533 K-GAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGN--GEDAYEVQSAAKRLDLNLNFQKGRDHA 598 (604)
Q Consensus 533 K-vvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGD--GPDreeLk~~a~~LgL~V~FtG~ldha 598 (604)
+ ++++.|++...||+..+++.+.+ .++++++|+|+ |+.++.|++.+.+++-+|.|+|+++..
T Consensus 203 ~~il~~~G~~~~~k~~~~li~~l~~----~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~ 267 (380)
T PRK13609 203 KILLIMAGAHGVLGNVKELCQSLMS----VPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENI 267 (380)
T ss_pred cEEEEEcCCCCCCcCHHHHHHHHhh----CCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhH
Confidence 5 55667999999999999998753 26788887753 346788988887666579999998653
No 64
>PLN00142 sucrose synthase
Probab=99.08 E-value=3.6e-10 Score=129.91 Aligned_cols=176 Identities=11% Similarity=0.060 Sum_probs=108.9
Q ss_pred CCCcEEEEcCcchhhhhcchhhhhcCCC-cEEEEEEcChhhHHhhhccch--hHH--H-HHHHHHHHHHHhhCCceeeCc
Q 007438 419 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGA--LQA--F-FVKHINNWVTRAYCDKVLRLS 492 (604)
Q Consensus 419 f~pDVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyHTNY~eYary~~~G~--l~a--p-lvR~~~r~~~r~yCdkVI~LS 492 (604)
..|||||-+- ..=|+- |...+++++ |+|.+.|+.=..--.+.+..+ ... . ..+.-..+.+...||.||++|
T Consensus 407 ~~PDlIHaHY-wdsg~v--A~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT 483 (815)
T PLN00142 407 GKPDLIIGNY-SDGNLV--ASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITST 483 (815)
T ss_pred CCCCEEEECC-ccHHHH--HHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCc
Confidence 3599999994 222233 556666666 999999987321111111110 000 0 111112445666899999999
Q ss_pred hhhhh--------ccC-------------Cc-------ceeE-EeecCCCCCCCccchhh-------------------h
Q 007438 493 AATQD--------LPK-------------SV-------ICNV-HGVNPKFLQIGEKVATD-------------------R 524 (604)
Q Consensus 493 ~avq~--------l~k-------------s~-------V~nV-hGVdp~fF~pg~r~a~r-------------------r 524 (604)
..-.. +.. .+ +..| -|||+..|.|......+ .
T Consensus 484 ~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e 563 (815)
T PLN00142 484 YQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDE 563 (815)
T ss_pred HHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHH
Confidence 64331 111 01 1222 28887766553321111 1
Q ss_pred hhcc--CCCCceEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCC------H------HHHHHHHHhcCC--c
Q 007438 525 EQGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGED------A------YEVQSAAKRLDL--N 588 (604)
Q Consensus 525 ~~g~--~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPD------r------eeLk~~a~~LgL--~ 588 (604)
..+. .+..++++|||||.++||++.||+++.++....++++|+|+|+|++ . ..+++.+.++++ .
T Consensus 564 ~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~ 643 (815)
T PLN00142 564 HIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQ 643 (815)
T ss_pred HhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCc
Confidence 1232 4456799999999999999999999988766666899999999832 2 347778889998 7
Q ss_pred EEEcCCCCC
Q 007438 589 LNFQKGRDH 597 (604)
Q Consensus 589 V~FtG~ldh 597 (604)
|.|+|...+
T Consensus 644 V~flG~~~~ 652 (815)
T PLN00142 644 FRWIAAQTN 652 (815)
T ss_pred EEEcCCcCC
Confidence 999997654
No 65
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.06 E-value=2.6e-09 Score=112.12 Aligned_cols=258 Identities=16% Similarity=0.146 Sum_probs=146.0
Q ss_pred EEEEecCCCCcccchh-hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccC----C--ceeCChhHHHHHHHHHHHHHh
Q 007438 312 VAIVTTASLPWMTGTA-VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYP----N--VTFCSPEEQENYMRNWLEERV 384 (604)
Q Consensus 312 IaIfTTAsLPWmTGtA-VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vyp----n--~rF~SpeeQe~~ir~wl~~r~ 384 (604)
+.++|++| ||-.|=. +.|=. .||.+.++ +|+|+..+.++... .+-+ | +.+-.+..=..++. |+.-.
T Consensus 2 ~~l~t~~~-p~~~~~~f~~~ei--~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 74 (407)
T cd04946 2 LILLTNTF-PGAKGESFIEPEI--KYLSKSFD-KIIILPTNVGKERE-KVRPNGVSNIIISNYRQDKSRAKLI-FLALS- 74 (407)
T ss_pred EEEEecCC-CCCCcccccHHHH--HHHHhcCC-EEEEEecccccccc-cCCCccccceEEeecccchhhHHHH-HHHHH-
Confidence 45677765 6888888 99999 99999888 99999666655332 2323 4 12211111111110 11100
Q ss_pred CCCCCceeeccCCcc-----------------cccccCccCCcc----ccccCCCCCCcEEEEcCcchhhhhcchhhhhc
Q 007438 385 GFKADFKISFYPGKF-----------------SKERRSIIPAGD----TSQFIPSKDADIAILEEPEHLNWYHHGKRWTD 443 (604)
Q Consensus 385 g~~~~~~i~fYPgry-----------------~a~~~SI~p~gd----I~r~L~~f~pDVVHLeEPehLGwy~~Garwt~ 443 (604)
-+..+||..+. .-...+++-.+- +.......+.||+|..-..+ ..+..+ .+.+
T Consensus 75 ----~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~sy~~~~-~~~~~~-~l~~ 148 (407)
T cd04946 75 ----VFSLPFYKELLKKLKRRRKNIKYFLLLLYFIKRSILLKLKYLHLLIYNSIDGQGTVFYSYWLHE-TAYALA-LLKK 148 (407)
T ss_pred ----hhhHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCceEEEEecCch-HHHHHH-HHHH
Confidence 01111111110 111111110010 11111334556766643222 222212 2334
Q ss_pred CCC-c-EEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceeeCchhhhhccC-------CcceeE-EeecCCC
Q 007438 444 KFN-H-VVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK-------SVICNV-HGVNPKF 513 (604)
Q Consensus 444 Kf~-P-VVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k-------s~V~nV-hGVdp~f 513 (604)
++. + +|.+.|- |+-|...... ....+.+.+.+ +||+||++|+..+++.+ ..+..+ .||+...
T Consensus 149 ~~~~~~~i~~~Hg-~d~~~~~~~~------~~~~~~~~~~~-~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~ 220 (407)
T cd04946 149 EYLRKRVISRAHG-YDLYEDRYPS------GYIPLRRYLLS-SLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPG 220 (407)
T ss_pred hcCCceEEEEecc-chhhhhhccc------cchHHHHHHHh-cCCEEEECCHHHHHHHHHHCCCccccEEEEECCccccc
Confidence 433 3 8888885 2223221111 11223334444 89999999998776432 122223 4877554
Q ss_pred CCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCC--CcEEEEEecCCCHHHHHHHHHhcCC--cE
Q 007438 514 LQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLD--GFKLDVFGNGEDAYEVQSAAKRLDL--NL 589 (604)
Q Consensus 514 F~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~--~~kLdIVGDGPDreeLk~~a~~LgL--~V 589 (604)
+.+.. .......++|+||+...||++.|++++..+....+ .+++.++|+|++.+.+++.+.++++ .|
T Consensus 221 ~~~~~---------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V 291 (407)
T cd04946 221 IISKP---------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISV 291 (407)
T ss_pred ccCCC---------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHHHhcCCCceE
Confidence 43321 12346789999999999999999999999887765 4678899999999999999987766 79
Q ss_pred EEcCCCCCCc
Q 007438 590 NFQKGRDHAD 599 (604)
Q Consensus 590 ~FtG~ldhad 599 (604)
.|+|.+++.+
T Consensus 292 ~f~G~v~~~e 301 (407)
T cd04946 292 NFTGELSNSE 301 (407)
T ss_pred EEecCCChHH
Confidence 9999998754
No 66
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=98.99 E-value=9.5e-10 Score=111.43 Aligned_cols=163 Identities=13% Similarity=-0.003 Sum_probs=102.6
Q ss_pred ccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCcee
Q 007438 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVL 489 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI 489 (604)
..+.+++++++|||+|.+.+.. +|....+.+..+ .|+|..+|..+. ...++++++ +||+||
T Consensus 81 ~~~~~~ik~~~pDvv~~~~~~~-~~~~~~~~~~~~-~p~v~~~~~~~~----------------~~~~r~~~~-~~d~ii 141 (357)
T PRK00726 81 LQARKILKRFKPDVVVGFGGYV-SGPGGLAARLLG-IPLVIHEQNAVP----------------GLANKLLAR-FAKKVA 141 (357)
T ss_pred HHHHHHHHhcCCCEEEECCCcc-hhHHHHHHHHcC-CCEEEEcCCCCc----------------cHHHHHHHH-Hhchhe
Confidence 4566779999999999998432 444322233333 487755553221 123344444 899999
Q ss_pred eCchhhhh-ccCCcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHH-HHHHHhhccCCCcEE
Q 007438 490 RLSAATQD-LPKSVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELI-DLLAKHKNDLDGFKL 566 (604)
Q Consensus 490 ~LS~avq~-l~ks~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LL-dl~~~v~~~~~~~kL 566 (604)
+.+..... .+...+..| .||+...+.+... +...+.++..++++++|++...|++..++ ++++++... + ..+
T Consensus 142 ~~~~~~~~~~~~~~i~vi~n~v~~~~~~~~~~---~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~-~-~~~ 216 (357)
T PRK00726 142 TAFPGAFPEFFKPKAVVTGNPVREEILALAAP---PARLAGREGKPTLLVVGGSQGARVLNEAVPEALALLPEA-L-QVI 216 (357)
T ss_pred ECchhhhhccCCCCEEEECCCCChHhhcccch---hhhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhhC-c-EEE
Confidence 88874321 112222222 3777666654221 11234455778899999999999887666 888777554 3 568
Q ss_pred EEEecCCCHHHHHHHHHhcCCcEEEcCCCCCC
Q 007438 567 DVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHA 598 (604)
Q Consensus 567 dIVGDGPDreeLk~~a~~LgL~V~FtG~ldha 598 (604)
.++|+|+. +++++..+ ++++|.|+|.++..
T Consensus 217 ~~~G~g~~-~~~~~~~~-~~~~v~~~g~~~~~ 246 (357)
T PRK00726 217 HQTGKGDL-EEVRAAYA-AGINAEVVPFIDDM 246 (357)
T ss_pred EEcCCCcH-HHHHHHhh-cCCcEEEeehHhhH
Confidence 89999986 55555556 88889999998543
No 67
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.91 E-value=2.6e-09 Score=109.31 Aligned_cols=183 Identities=16% Similarity=0.174 Sum_probs=108.4
Q ss_pred HhCCCCCceeeccCCcccccccCccCCccccccCCCCCC-cEEEEcCcchhhh-h-cch-hhhhcCCCcEEEEEEcChhh
Q 007438 383 RVGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDA-DIAILEEPEHLNW-Y-HHG-KRWTDKFNHVVGVVHTNYLE 458 (604)
Q Consensus 383 r~g~~~~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~p-DVVHLeEPehLGw-y-~~G-arwt~Kf~PVVgiyHTNY~e 458 (604)
.+|+.. +++.+||..+...+.... .+.+.+..+++ ||+|+++|..++. + ... ..+++.-.|+|..+|..|..
T Consensus 30 ~~g~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~ 105 (333)
T PRK09814 30 QLGFEE-LGIYFYNIKRDSLSERSK---RLDGILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPL 105 (333)
T ss_pred HCCCeE-eEEEecccccchHHHHHH---HHHHHHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHH
Confidence 467643 667888876654432111 22234666778 9999999999873 2 212 23333214999999998754
Q ss_pred HHhhhccchhHHHHHHHHHHHHHHhhCCceeeCchhhhhccC-Ccce--eEEeecCCCCCCCccchhhhhhccCCCCceE
Q 007438 459 YIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK-SVIC--NVHGVNPKFLQIGEKVATDREQGQQAFSKGA 535 (604)
Q Consensus 459 Yary~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k-s~V~--nVhGVdp~fF~pg~r~a~rr~~g~~~~~Kvv 535 (604)
... ..+. . +++.+++++ .||.||++|+..++... .++. +|+ ....|........ + .....++.+
T Consensus 106 ~~~--~~~~----~-~~~~~~~~~-~aD~iI~~S~~~~~~l~~~g~~~~~i~--~~~~~~~~~~~~~-~--~~~~~~~~i 172 (333)
T PRK09814 106 RFD--SNYY----L-MKEEIDMLN-LADVLIVHSKKMKDRLVEEGLTTDKII--VQGIFDYLNDIEL-V--KTPSFQKKI 172 (333)
T ss_pred hcc--ccch----h-hHHHHHHHH-hCCEEEECCHHHHHHHHHcCCCcCceE--ecccccccccccc-c--ccccCCceE
Confidence 221 1111 1 344466667 89999999998887542 3332 222 1123322211000 0 012345689
Q ss_pred EEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCCcEEEcCCCCCCc
Q 007438 536 YFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHAD 599 (604)
Q Consensus 536 LFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL~V~FtG~ldhad 599 (604)
+|+|+|....+ |.+ ..++++|+|+|+||+++ ...-+|+|+|..++.+
T Consensus 173 ~yaG~l~k~~~---l~~-------~~~~~~l~i~G~g~~~~-------~~~~~V~f~G~~~~ee 219 (333)
T PRK09814 173 NFAGNLEKSPF---LKN-------WSQGIKLTVFGPNPEDL-------ENSANISYKGWFDPEE 219 (333)
T ss_pred EEecChhhchH---HHh-------cCCCCeEEEECCCcccc-------ccCCCeEEecCCCHHH
Confidence 99999994432 211 23568999999999876 1112899999998765
No 68
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=98.87 E-value=5.2e-09 Score=112.76 Aligned_cols=161 Identities=10% Similarity=0.051 Sum_probs=104.5
Q ss_pred CCcEEEEcCcchhhhhcchhhhhcCC--CcEEEEEEcChhhHHhhhccch---hHHHH---------HHHHHHHHHHhhC
Q 007438 420 DADIAILEEPEHLNWYHHGKRWTDKF--NHVVGVVHTNYLEYIKREKNGA---LQAFF---------VKHINNWVTRAYC 485 (604)
Q Consensus 420 ~pDVVHLeEPehLGwy~~Garwt~Kf--~PVVgiyHTNY~eYary~~~G~---l~apl---------vR~~~r~~~r~yC 485 (604)
..|+|+++++ ||.... ...+.+. .++++.+||-|..|--+..++. +..-+ ...+.++|.. .|
T Consensus 131 ~~d~iwihDy-hl~llp--~~lr~~~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~-~~ 206 (460)
T cd03788 131 PGDLVWVHDY-HLLLLP--QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLS-CC 206 (460)
T ss_pred CCCEEEEeCh-hhhHHH--HHHHhhCCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHH-HH
Confidence 4699999997 666663 3333322 4889999999987766543332 22212 2235566666 78
Q ss_pred CceeeCchhhhhcc---C--CcceeE-EeecCCCCCCCccchh-----hhhhccCCCCceEEEEeccccccCHHHHHHHH
Q 007438 486 DKVLRLSAATQDLP---K--SVICNV-HGVNPKFLQIGEKVAT-----DREQGQQAFSKGAYFLGKMVWAKGYRELIDLL 554 (604)
Q Consensus 486 dkVI~LS~avq~l~---k--s~V~nV-hGVdp~fF~pg~r~a~-----rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~ 554 (604)
++++.++....... . ..|..+ .|||++.|.+...... +...+..++.+++++||||.+.||++.||+++
T Consensus 207 ~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~ 286 (460)
T cd03788 207 SRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAF 286 (460)
T ss_pred HHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHH
Confidence 88888886553221 1 122223 3999988876432221 11234455788999999999999999999999
Q ss_pred HHhhccCCC----cEEEEEe-----cCCCHHHHHHHHHh
Q 007438 555 AKHKNDLDG----FKLDVFG-----NGEDAYEVQSAAKR 584 (604)
Q Consensus 555 ~~v~~~~~~----~kLdIVG-----DGPDreeLk~~a~~ 584 (604)
+.+.+..++ ++|+++| +||+.+++++.+.+
T Consensus 287 ~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~ 325 (460)
T cd03788 287 ERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEE 325 (460)
T ss_pred HHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHH
Confidence 988777676 4688885 45666666666554
No 69
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.79 E-value=4.7e-08 Score=97.74 Aligned_cols=156 Identities=17% Similarity=0.084 Sum_probs=97.0
Q ss_pred ccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCcee
Q 007438 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVL 489 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI 489 (604)
.++.+++++++|||+|.+.+.. ++...-+++..+ .|+| +|.. ..+. ....+++.+ +||++|
T Consensus 80 ~~l~~~i~~~~pDvVi~~~~~~-~~~~~~~~~~~~-~p~v--~~~~-~~~~-------------~~~~~~~~~-~~d~ii 140 (348)
T TIGR01133 80 FQARRILKKFKPDAVIGFGGYV-SGPAGLAAKLLG-IPLF--HHEQ-NAVP-------------GLTNKLLSR-FAKKVL 140 (348)
T ss_pred HHHHHHHHhcCCCEEEEcCCcc-cHHHHHHHHHcC-CCEE--EECC-CCCc-------------cHHHHHHHH-HhCeeE
Confidence 3567779999999999997654 333212233334 3765 3321 1010 122345555 899999
Q ss_pred eCchhhhhccCCcceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHH-HHHHHHhhccCCCcEE-
Q 007438 490 RLSAATQDLPKSVICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYREL-IDLLAKHKNDLDGFKL- 566 (604)
Q Consensus 490 ~LS~avq~l~ks~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~L-Ldl~~~v~~~~~~~kL- 566 (604)
+.|+..+++.+. ..| +||+..++.+... +...+.+++.++++++|++...|++..+ +++++.+... ++++
T Consensus 141 ~~~~~~~~~~~~--~~i~n~v~~~~~~~~~~---~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~ 213 (348)
T TIGR01133 141 ISFPGAKDHFEA--VLVGNPVRQEIRSLPVP---RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIV 213 (348)
T ss_pred ECchhHhhcCCc--eEEcCCcCHHHhcccch---hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEE
Confidence 999988876542 222 4776555543211 1234555677889999999999998764 4787776542 4554
Q ss_pred EEEecCCCHHHHHHHHHhcCC-cE-EEc
Q 007438 567 DVFGNGEDAYEVQSAAKRLDL-NL-NFQ 592 (604)
Q Consensus 567 dIVGDGPDreeLk~~a~~LgL-~V-~Ft 592 (604)
.++|+|+ .+.|++.+.++++ ++ .|+
T Consensus 214 ~~~g~~~-~~~l~~~~~~~~l~~~v~~~ 240 (348)
T TIGR01133 214 HQTGKND-LEKVKNVYQELGIEAIVTFI 240 (348)
T ss_pred EECCcch-HHHHHHHHhhCCceEEecCc
Confidence 4566664 5889999998887 33 454
No 70
>PLN02949 transferase, transferring glycosyl groups
Probab=98.74 E-value=9.7e-08 Score=103.72 Aligned_cols=110 Identities=17% Similarity=0.088 Sum_probs=79.2
Q ss_pred hhCCceeeCchhhhhccC------CcceeEE-eecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHH
Q 007438 483 AYCDKVLRLSAATQDLPK------SVICNVH-GVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLA 555 (604)
Q Consensus 483 ~yCdkVI~LS~avq~l~k------s~V~nVh-GVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~ 555 (604)
.+||.||+.|.-+++..+ ..+..|+ ||+...|...... .....+.++||||+..+||++.+|++++
T Consensus 219 ~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~~-------~~~~~~~il~vGR~~~~Kg~~llI~A~~ 291 (463)
T PLN02949 219 RCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPLE-------RSEDPPYIISVAQFRPEKAHALQLEAFA 291 (463)
T ss_pred CCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCcc-------ccCCCCEEEEEEeeeccCCHHHHHHHHH
Confidence 489999999998887432 1222232 6664434221110 1224568999999999999999999998
Q ss_pred Hhhc----cCCCcEEEEEecCCC------HHHHHHHHHhcCC--cEEEcCCCCCCc
Q 007438 556 KHKN----DLDGFKLDVFGNGED------AYEVQSAAKRLDL--NLNFQKGRDHAD 599 (604)
Q Consensus 556 ~v~~----~~~~~kLdIVGDGPD------reeLk~~a~~LgL--~V~FtG~ldhad 599 (604)
++.+ ..++++|+|+|+|+. .++|++.+++++| +|+|+|..++++
T Consensus 292 ~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~e 347 (463)
T PLN02949 292 LALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRD 347 (463)
T ss_pred HHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHH
Confidence 7654 236799999999853 2679999999999 799999986543
No 71
>PRK10125 putative glycosyl transferase; Provisional
Probab=98.67 E-value=1e-06 Score=93.63 Aligned_cols=170 Identities=11% Similarity=0.016 Sum_probs=97.2
Q ss_pred cccccC-CCCCCcEEEEcCcchhhhhcc---hh-----hhhcCCCcEEEEEEcChhh-----HH----hh----------
Q 007438 411 DTSQFI-PSKDADIAILEEPEHLNWYHH---GK-----RWTDKFNHVVGVVHTNYLE-----YI----KR---------- 462 (604)
Q Consensus 411 dI~r~L-~~f~pDVVHLeEPehLGwy~~---Ga-----rwt~Kf~PVVgiyHTNY~e-----Ya----ry---------- 462 (604)
.+.++| .+++|||||++. .|-++... .. +.+..-.|+|.+.|-.+.- |. ++
T Consensus 84 ~~~~~i~~~~~pDviHlH~-~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l 162 (405)
T PRK10125 84 ELYRTITRTPGPVVLHFHV-LHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTL 162 (405)
T ss_pred HHHHHHhhccCCCEEEEec-ccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCc
Confidence 344446 689999999998 55544332 11 1222325999999977731 10 00
Q ss_pred --hcc-chh-HHHHHHH---HHHHHHHhhCCceeeCchhhhhccC-----CcceeE-EeecCCCCCCCccchhhhhhccC
Q 007438 463 --EKN-GAL-QAFFVKH---INNWVTRAYCDKVLRLSAATQDLPK-----SVICNV-HGVNPKFLQIGEKVATDREQGQQ 529 (604)
Q Consensus 463 --~~~-G~l-~aplvR~---~~r~~~r~yCdkVI~LS~avq~l~k-----s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~ 529 (604)
++. ..- ....+.. +.+.+.+ .++.+|++|..+++... ..+..| .|||+..+.+.......+ .+
T Consensus 163 ~~~~~~~~d~~~~~~~~k~~~~~~~~~-~~~~iV~~S~~l~~~~~~~~~~~~i~vI~NGid~~~~~~~~~~~~~~---~~ 238 (405)
T PRK10125 163 NNYPPVKVDRAHQLVAGKRQLFREMLA-LGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILAELPPVR---ET 238 (405)
T ss_pred cCCCCCccchHHHHHHHHHHHHHHHhh-cCcEEEEcCHHHHHHHHHHcCCCCEEEeCCCcCcccccccccccccc---cC
Confidence 110 111 1111111 2222222 46789999998776322 333444 399964333221111011 13
Q ss_pred CCCceEEEEeccc--cccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCCcEEEcCCCCC
Q 007438 530 AFSKGAYFLGKMV--WAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDH 597 (604)
Q Consensus 530 ~~~KvvLFVGRLv--wEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL~V~FtG~ldh 597 (604)
+..++++|+|++. ..||++.|+++++.+. ++++|+|+|+|+.... -.+.|+|....
T Consensus 239 ~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~~~~~---------~~v~~~g~~~~ 296 (405)
T PRK10125 239 QGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFSPFTA---------GNVVNHGFETD 296 (405)
T ss_pred CCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCCcccc---------cceEEecCcCC
Confidence 4567899999965 4699999999997753 4689999999975321 15778887643
No 72
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.67 E-value=1.2e-07 Score=95.71 Aligned_cols=174 Identities=9% Similarity=-0.017 Sum_probs=107.0
Q ss_pred ccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCcee
Q 007438 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVL 489 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI 489 (604)
..+.+.+.+++|||||++.....++....++...+ .|+|++.|..- .|.+ +... ..+++....++|.++
T Consensus 78 ~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~-iPvv~~~~g~~-s~~~----~~~~-----~~~r~~~~~~ad~~~ 146 (363)
T cd03786 78 IGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLG-IPVAHVEAGLR-SFDR----GMPD-----EENRHAIDKLSDLHF 146 (363)
T ss_pred HHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHcC-CCEEEEecccc-cCCC----CCCc-----hHHHHHHHHHhhhcc
Confidence 45666688899999999964444444222333333 49887665321 1211 1110 112333344789999
Q ss_pred eCchhhhhcc-CCcce--eE--Ee---ecCCCCCCC-cc-chhhhhhccCCCCceEEEEecccc---ccCHHHHHHHHHH
Q 007438 490 RLSAATQDLP-KSVIC--NV--HG---VNPKFLQIG-EK-VATDREQGQQAFSKGAYFLGKMVW---AKGYRELIDLLAK 556 (604)
Q Consensus 490 ~LS~avq~l~-ks~V~--nV--hG---Vdp~fF~pg-~r-~a~rr~~g~~~~~KvvLFVGRLvw---EKGfD~LLdl~~~ 556 (604)
++|+..++.. +.++. +| +| ++...+.+. .+ ...+...+.++...+++++||+.. .||++.|+++++.
T Consensus 147 ~~s~~~~~~l~~~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~ 226 (363)
T cd03786 147 APTEEARRNLLQEGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAE 226 (363)
T ss_pred CCCHHHHHHHHHcCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHH
Confidence 9999887743 32222 23 23 232221111 11 111224455555667889999986 7999999999988
Q ss_pred hhccCCCcEEEEEecCCCHHHHHHHHHhcCC---cEEEcCCCC
Q 007438 557 HKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL---NLNFQKGRD 596 (604)
Q Consensus 557 v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL---~V~FtG~ld 596 (604)
+... ++.+++.|+|+.++.+++.+.++++ ++.|+|...
T Consensus 227 l~~~--~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~ 267 (363)
T cd03786 227 LAEE--DVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLG 267 (363)
T ss_pred HHhc--CCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcC
Confidence 7543 5788888999999999999888764 788998654
No 73
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=98.66 E-value=2e-08 Score=88.49 Aligned_cols=169 Identities=20% Similarity=0.209 Sum_probs=90.9
Q ss_pred EEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCceee
Q 007438 314 IVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKIS 393 (604)
Q Consensus 314 IfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~~i~ 393 (604)
++|+.++|...|+..-.+-=|.+|++.|| +|+++.|.......+.. ...+. ..
T Consensus 2 li~~~~~~~~GG~e~~~~~l~~~l~~~G~-~v~v~~~~~~~~~~~~~--~~~~~------------------------~~ 54 (177)
T PF13439_consen 2 LITNIFLPNIGGAERVVLNLARALAKRGH-EVTVVSPGVKDPIEEEL--VKIFV------------------------KI 54 (177)
T ss_dssp EEECC-TTSSSHHHHHHHHHHHHHHHTT--EEEEEESS-TTS-SSTE--EEE---------------------------T
T ss_pred EEEEecCCCCChHHHHHHHHHHHHHHCCC-EEEEEEcCCCccchhhc--cceee------------------------ee
Confidence 78999999999999333333499999999 99999888754322210 00111 11
Q ss_pred ccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHH
Q 007438 394 FYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFV 473 (604)
Q Consensus 394 fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplv 473 (604)
.++.+ .....++.....+.+.+++.++||||++.+....+.. .+.. + .|+|.++|+.+.................
T Consensus 55 ~~~~~-~~~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~--~~~~-~-~~~v~~~H~~~~~~~~~~~~~~~~~~~~ 129 (177)
T PF13439_consen 55 PYPIR-KRFLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIAL--LACR-K-VPIVYTIHGPYFERRFLKSKLSPYSYLN 129 (177)
T ss_dssp T-SST-SS--HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHH--HHHH-C-SCEEEEE-HHH--HHTTTTSCCCHHHHH
T ss_pred ecccc-cccchhHHHHHHHHHHHHHcCCCeEEecccchhHHHH--Hhcc-C-CCEEEEeCCCcccccccccccchhhhhh
Confidence 11111 1112222334556677888899999999965544442 2222 3 6899999999943111111112223333
Q ss_pred HHHHHHHHHhhCCceeeCchhhhhcc------CCcceeE-EeecCCCCC
Q 007438 474 KHINNWVTRAYCDKVLRLSAATQDLP------KSVICNV-HGVNPKFLQ 515 (604)
Q Consensus 474 R~~~r~~~r~yCdkVI~LS~avq~l~------ks~V~nV-hGVdp~fF~ 515 (604)
..+.+++. ..+|+||+.|..+++.. +..|..| .|||.+.|+
T Consensus 130 ~~~~~~~~-~~~~~ii~vS~~~~~~l~~~~~~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 130 FRIERKLY-KKADRIIAVSESTKDELIKFGIPPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HCTTHHHH-CCSSEEEESSHHHHHHHHHHT--SS-EEE----B-CCCH-
T ss_pred hhhhhhHH-hcCCEEEEECHHHHHHHHHhCCcccCCEEEECCccHHHcC
Confidence 33444443 48999999999998843 2334444 499998874
No 74
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=98.59 E-value=8.3e-08 Score=99.78 Aligned_cols=167 Identities=13% Similarity=0.061 Sum_probs=106.1
Q ss_pred ccccccCCCCCCcEEEEcCcch----hhhhcchhhhh-cCC-CcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHh
Q 007438 410 GDTSQFIPSKDADIAILEEPEH----LNWYHHGKRWT-DKF-NHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRA 483 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPeh----LGwy~~Garwt-~Kf-~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~ 483 (604)
.++.+.|.+++|||||.+-|.. +.+. ..... .+. .|+| +++|+|.. .+ ..|+.+
T Consensus 90 ~~l~~~i~~~~pDvIi~thp~~~~~~~~~l--~~~~~~~~~~~p~~-~~~tD~~~-~~---------------~~w~~~- 149 (382)
T PLN02605 90 REVAKGLMKYKPDIIVSVHPLMQHVPLRVL--RWQGKELGKKIPFT-TVVTDLGT-CH---------------PTWFHK- 149 (382)
T ss_pred HHHHHHHHhcCcCEEEEeCcCcccCHHHHH--HHHhhccCCCCCEE-EEECCCCC-cC---------------cccccC-
Confidence 4677889999999999976662 2121 11110 122 3754 56688821 11 133344
Q ss_pred hCCceeeCchhhhhcc-CCcc--ee--EEeec--CCCCCCC-ccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHH
Q 007438 484 YCDKVLRLSAATQDLP-KSVI--CN--VHGVN--PKFLQIG-EKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLA 555 (604)
Q Consensus 484 yCdkVI~LS~avq~l~-ks~V--~n--VhGVd--p~fF~pg-~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~ 555 (604)
.||++++.|+..++.. +.++ .+ |+|++ +.|+.+. ++...+.+.+.+++.++++++|+..-.||+..+++.+.
T Consensus 150 ~~d~~~~~s~~~~~~l~~~g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~ 229 (382)
T PLN02605 150 GVTRCFCPSEEVAKRALKRGLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALG 229 (382)
T ss_pred CCCEEEECCHHHHHHHHHcCCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHH
Confidence 9999999998877632 2222 22 34544 5555543 34445667787888899999999999999999999886
Q ss_pred Hhh----ccCCCc-EEEEEecCCC-HHHHHHHHHhcCCcEEEcCCCCCC
Q 007438 556 KHK----NDLDGF-KLDVFGNGED-AYEVQSAAKRLDLNLNFQKGRDHA 598 (604)
Q Consensus 556 ~v~----~~~~~~-kLdIVGDGPD-reeLk~~a~~LgL~V~FtG~ldha 598 (604)
... ...++. .++|+|+|+. ++.|++.. .+..|+|+|+++..
T Consensus 230 ~~~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~--~~~~v~~~G~~~~~ 276 (382)
T PLN02605 230 DSLYDKNLGKPIGQVVVICGRNKKLQSKLESRD--WKIPVKVRGFVTNM 276 (382)
T ss_pred HhhccccccCCCceEEEEECCCHHHHHHHHhhc--ccCCeEEEeccccH
Confidence 542 112445 4788898853 56666542 24478999998743
No 75
>PHA01633 putative glycosyl transferase group 1
Probab=98.53 E-value=8.2e-07 Score=93.54 Aligned_cols=145 Identities=13% Similarity=0.120 Sum_probs=96.9
Q ss_pred CcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceeeCchhhhhcc-CC----c
Q 007438 428 EPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLP-KS----V 502 (604)
Q Consensus 428 EPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~-ks----~ 502 (604)
.|-+||-|-..+.+-++-+|.+.++|--|. ...+|+++.+ . ++||+.|..+.+.. +. .
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~tt~~g~~~---------------~~~y~~~m~~-~-~~vIavS~~t~~~L~~~G~~~~ 115 (335)
T PHA01633 53 HPPSLNPYLYAYYQFKGKKYFYTTCDGIPN---------------IEIVNKYLLQ-D-VKFIPNSKFSAENLQEVGLQVD 115 (335)
T ss_pred CCcccchHHhhhhhhcCCCceEEeeCCcCc---------------hHHHHHHHhc-C-CEEEeCCHHHHHHHHHhCCCCc
Confidence 344566664444455554788988888773 1467777777 3 38999998777632 22 2
Q ss_pred ceeEEeecCCCCCCCccc--hhhhhhccC-CCCceEEEEeccccccCHHHHHHHHHHhhccCCC----cEEEEEecCCCH
Q 007438 503 ICNVHGVNPKFLQIGEKV--ATDREQGQQ-AFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDG----FKLDVFGNGEDA 575 (604)
Q Consensus 503 V~nVhGVdp~fF~pg~r~--a~rr~~g~~-~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~----~kLdIVGDGPDr 575 (604)
+..++|||+..|.+..+. ..+...+.. +....++|||||.++||++.|+++++.+.+..++ +++.|+|++
T Consensus 116 i~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~--- 192 (335)
T PHA01633 116 LPVFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK--- 192 (335)
T ss_pred eeeeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH---
Confidence 334479999999875421 122233322 4567899999999999999999999998766654 478888742
Q ss_pred HHHHHHHHhcCC--cEEEcCCCCC
Q 007438 576 YEVQSAAKRLDL--NLNFQKGRDH 597 (604)
Q Consensus 576 eeLk~~a~~LgL--~V~FtG~ldh 597 (604)
...++++ .|.|+|...+
T Consensus 193 -----~~~~l~l~~~V~f~g~~G~ 211 (335)
T PHA01633 193 -----QFTQLEVPANVHFVAEFGH 211 (335)
T ss_pred -----HHHHcCCCCcEEEEecCCC
Confidence 2334555 7999965543
No 76
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.50 E-value=3.2e-07 Score=96.27 Aligned_cols=164 Identities=16% Similarity=0.174 Sum_probs=102.7
Q ss_pred CccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCC-cEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCc
Q 007438 409 AGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDK 487 (604)
Q Consensus 409 ~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdk 487 (604)
...+.++|.+++||+||...|.-+ +. ....+.+.+ |+ .+++|+|. .+ ..|+.+ +||+
T Consensus 93 ~~~l~~~l~~~kPDvVi~~~p~~~-~~--~l~~~~~~~iP~-~~v~td~~--~~---------------~~w~~~-~~d~ 150 (391)
T PRK13608 93 LNKLINLLIKEKPDLILLTFPTPV-MS--VLTEQFNINIPV-ATVMTDYR--LH---------------KNWITP-YSTR 150 (391)
T ss_pred HHHHHHHHHHhCcCEEEECCcHHH-HH--HHHHhcCCCCCE-EEEeCCCC--cc---------------cccccC-CCCE
Confidence 357788899999999999888653 22 222333334 85 56789971 22 123333 8999
Q ss_pred eeeCchhhhhcc-CCcc--ee--EEeec--CCCCCCCccchhhhhhccCCCCc-eEEEEeccccccCHHHHHHHHHHhhc
Q 007438 488 VLRLSAATQDLP-KSVI--CN--VHGVN--PKFLQIGEKVATDREQGQQAFSK-GAYFLGKMVWAKGYRELIDLLAKHKN 559 (604)
Q Consensus 488 VI~LS~avq~l~-ks~V--~n--VhGVd--p~fF~pg~r~a~rr~~g~~~~~K-vvLFVGRLvwEKGfD~LLdl~~~v~~ 559 (604)
++++|+..++.. +.++ .+ |+|++ +.|..+.++...+++.+.+++.+ ++++.|++..+||++.|++.+.+
T Consensus 151 ~~v~s~~~~~~l~~~gi~~~ki~v~GiPv~~~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~--- 227 (391)
T PRK13608 151 YYVATKETKQDFIDVGIDPSTVKVTGIPIDNKFETPIDQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILA--- 227 (391)
T ss_pred EEECCHHHHHHHHHcCCCHHHEEEECeecChHhcccccHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHh---
Confidence 999999887643 2222 23 35776 33433333334445556555554 56789999999999999988532
Q ss_pred cCCCcEEEEE-ecCCC-HHHHHHHHHhcCCcEEEcCCCCCC
Q 007438 560 DLDGFKLDVF-GNGED-AYEVQSAAKRLDLNLNFQKGRDHA 598 (604)
Q Consensus 560 ~~~~~kLdIV-GDGPD-reeLk~~a~~LgL~V~FtG~ldha 598 (604)
..++++++++ |.+++ .+++++.... +-+|.|+|++++.
T Consensus 228 ~~~~~~~vvv~G~~~~l~~~l~~~~~~-~~~v~~~G~~~~~ 267 (391)
T PRK13608 228 KSANAQVVMICGKSKELKRSLTAKFKS-NENVLILGYTKHM 267 (391)
T ss_pred cCCCceEEEEcCCCHHHHHHHHHHhcc-CCCeEEEeccchH
Confidence 3357888666 44432 3556654422 2278999998653
No 77
>PHA01630 putative group 1 glycosyl transferase
Probab=98.46 E-value=1.5e-06 Score=90.53 Aligned_cols=110 Identities=13% Similarity=0.079 Sum_probs=78.9
Q ss_pred cEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceeeCchhhhhcc-C------CcceeE-EeecCCCCCCCc
Q 007438 447 HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLP-K------SVICNV-HGVNPKFLQIGE 518 (604)
Q Consensus 447 PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~-k------s~V~nV-hGVdp~fF~pg~ 518 (604)
|+|...|.-| ++.+.+-+++....||.||++|...++.. + ..+..| +|||+..|.+..
T Consensus 71 ~~v~e~~~~~--------------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~ 136 (331)
T PHA01630 71 NIVFEVADTD--------------AISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKP 136 (331)
T ss_pred ceEEEEEeec--------------hhhHHHHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCc
Confidence 7777777722 13334445553458999999999888743 2 233444 599998887653
Q ss_pred cchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHH
Q 007438 519 KVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEV 578 (604)
Q Consensus 519 r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeL 578 (604)
.. .....+++|+|++..+||++.||++++.+.+..+++++.|+|+|+.+..+
T Consensus 137 ~~--------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~~~l 188 (331)
T PHA01630 137 KE--------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLDPRL 188 (331)
T ss_pred cc--------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccchhh
Confidence 21 12344677888999999999999999998877788999999998876543
No 78
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.38 E-value=5.6e-06 Score=91.41 Aligned_cols=256 Identities=16% Similarity=0.111 Sum_probs=137.8
Q ss_pred ceEEEEecCCCCcc--cchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccC---C-ceeCChhHHHHHHHHHHHHH
Q 007438 310 RNVAIVTTASLPWM--TGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYP---N-VTFCSPEEQENYMRNWLEER 383 (604)
Q Consensus 310 r~IaIfTTAsLPWm--TGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vyp---n-~rF~SpeeQe~~ir~wl~~r 383 (604)
|+|-.+|....|.+ .|.+.+-.-=+.+|++.|+ +|++++|.++. -|+.... + .+|.. ...|-.+-
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~-~v~v~lP~y~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~ 71 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGV-DVRVLLPSYPK-VQKEWRDLLKVVGKFGV-------LKGGRAQL 71 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCC-eEEEEcCCchh-hhhhhccccceeeEeee-------eecccceE
Confidence 78888999999965 5666333333489999997 99999999982 2321111 1 12221 00111111
Q ss_pred hCCC-----CCceeec-----cCCc--------c-cccccC--------ccCCccccccCCCCCCcEEEEcCcchhhhhc
Q 007438 384 VGFK-----ADFKISF-----YPGK--------F-SKERRS--------IIPAGDTSQFIPSKDADIAILEEPEHLNWYH 436 (604)
Q Consensus 384 ~g~~-----~~~~i~f-----YPgr--------y-~a~~~S--------I~p~gdI~r~L~~f~pDVVHLeEPehLGwy~ 436 (604)
++.. .++++.+ |-+| + ...+.. +.|.+. +. ..|||||.++ -|.++-.
T Consensus 72 ~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~----~~-~~pDIvH~hD-Wqt~L~~ 145 (487)
T COG0297 72 FIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGL----IS-WLPDIVHAHD-WQTGLLP 145 (487)
T ss_pred EEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcC----CC-CCCCEEEeec-HHHHHHH
Confidence 1110 0012111 1111 0 000111 011121 22 6799999999 8888873
Q ss_pred chhhhhc----CC-CcEEEEEEcC-hh-hHH----hhhccchhHHH--HHH-----HHHHHHHHhhCCceeeCchhhhh-
Q 007438 437 HGKRWTD----KF-NHVVGVVHTN-YL-EYI----KREKNGALQAF--FVK-----HINNWVTRAYCDKVLRLSAATQD- 497 (604)
Q Consensus 437 ~Garwt~----Kf-~PVVgiyHTN-Y~-eYa----ry~~~G~l~ap--lvR-----~~~r~~~r~yCdkVI~LS~avq~- 497 (604)
...+. .. .|.|.|+|.. |. .|. .--+++...-. .+. .+-+.-+. |+|.|.+.|..-..
T Consensus 146 --~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~-~ad~vttVSptYa~E 222 (487)
T COG0297 146 --AYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLY-YADAVTTVSPTYAGE 222 (487)
T ss_pred --HHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhhe-eccEEEEECHHHHHh
Confidence 33333 22 3999999954 33 111 11122211000 000 12333444 88999888875433
Q ss_pred cc------------CCcceeEE----eecCCCCCCCccch-------------h------hhhhccC--CCCceEEEEec
Q 007438 498 LP------------KSVICNVH----GVNPKFLQIGEKVA-------------T------DREQGQQ--AFSKGAYFLGK 540 (604)
Q Consensus 498 l~------------ks~V~nVh----GVdp~fF~pg~r~a-------------~------rr~~g~~--~~~KvvLFVGR 540 (604)
+. +...+.|+ |||-...+|+.... . ....+.. .+.+.+.+|||
T Consensus 223 i~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsR 302 (487)
T COG0297 223 IYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSR 302 (487)
T ss_pred hccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeec
Confidence 11 11113333 78877777754321 0 1112333 35689999999
Q ss_pred cccccCHHHHHHHHHHhhccCCCcEEEEEecC--CCHHHHHHHHHhc
Q 007438 541 MVWAKGYRELIDLLAKHKNDLDGFKLDVFGNG--EDAYEVQSAAKRL 585 (604)
Q Consensus 541 LvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDG--PDreeLk~~a~~L 585 (604)
|++|||+|.+++++..+-+.. ++++|+|.| .-++.+...+.++
T Consensus 303 l~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~~le~~~~~la~~~ 347 (487)
T COG0297 303 LTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDPELEEALRALASRH 347 (487)
T ss_pred cccccchhHHHHHHHHHHHhC--ceEEEEecCcHHHHHHHHHHHHhc
Confidence 999999999999998776654 999999999 2234444555443
No 79
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=98.35 E-value=9.4e-07 Score=76.69 Aligned_cols=136 Identities=17% Similarity=0.125 Sum_probs=72.5
Q ss_pred hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCceeeccCCcccccccCcc
Q 007438 328 VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSII 407 (604)
Q Consensus 328 VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~~i~fYPgry~a~~~SI~ 407 (604)
+.-|. ..|++.|| +|+++.|..+..+.+....++++.. +++...+. .......
T Consensus 7 ~~~l~--~~L~~~G~-~V~v~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~-~~~~~~~-- 59 (160)
T PF13579_consen 7 VRELA--RALAARGH-EVTVVTPQPDPEDDEEEEDGVRVHR---------------------LPLPRRPW-PLRLLRF-- 59 (160)
T ss_dssp HHHHH--HHHHHTT--EEEEEEE---GGG-SEEETTEEEEE---------------------E--S-SSS-GGGHCCH--
T ss_pred HHHHH--HHHHHCCC-EEEEEecCCCCcccccccCCceEEe---------------------ccCCccch-hhhhHHH--
Confidence 55555 89999999 9999999877654433223444433 33333321 1111111
Q ss_pred CCccccccC--CCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhC
Q 007438 408 PAGDTSQFI--PSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYC 485 (604)
Q Consensus 408 p~gdI~r~L--~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yC 485 (604)
...+.+++ .+.++||||++.| ..++...-.++..+ .|+|.++|....... .....++++.+.+++.+ .|
T Consensus 60 -~~~~~~~l~~~~~~~Dvv~~~~~-~~~~~~~~~~~~~~-~p~v~~~h~~~~~~~-----~~~~~~~~~~~~~~~~~-~a 130 (160)
T PF13579_consen 60 -LRRLRRLLAARRERPDVVHAHSP-TAGLVAALARRRRG-IPLVVTVHGTLFRRG-----SRWKRRLYRWLERRLLR-RA 130 (160)
T ss_dssp -HHHHHHHCHHCT---SEEEEEHH-HHHHHHHHHHHHHT---EEEE-SS-T-----------HHHHHHHHHHHHHHH-H-
T ss_pred -HHHHHHHHhhhccCCeEEEeccc-chhHHHHHHHHccC-CcEEEEECCCchhhc-----cchhhHHHHHHHHHHHh-cC
Confidence 23456667 8999999999995 45555433332333 599999997442111 22344466777777777 89
Q ss_pred CceeeCchhhhhcc
Q 007438 486 DKVLRLSAATQDLP 499 (604)
Q Consensus 486 dkVI~LS~avq~l~ 499 (604)
|.||++|+...+..
T Consensus 131 d~vi~~S~~~~~~l 144 (160)
T PF13579_consen 131 DRVIVVSEAMRRYL 144 (160)
T ss_dssp SEEEESSHHHHHHH
T ss_pred CEEEECCHHHHHHH
Confidence 99999999988754
No 80
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.32 E-value=2.6e-06 Score=88.38 Aligned_cols=162 Identities=11% Similarity=0.017 Sum_probs=98.1
Q ss_pred CCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceeeCchhhhh
Q 007438 418 SKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQD 497 (604)
Q Consensus 418 ~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~ 497 (604)
.++.+|++...|....+..+ .+..++ +||.. +.+....... .....+.+.+++ .||.||+.|...++
T Consensus 100 ~~~~~i~~~~~P~~~~~~~~-----~~~~~~--Vyd~~-D~~~~~~~~~----~~~~~~e~~~~~-~ad~vi~~S~~l~~ 166 (373)
T cd04950 100 GFGRPILWYYTPYTLPVAAL-----LQASLV--VYDCV-DDLSAFPGGP----PELLEAERRLLK-RADLVFTTSPSLYE 166 (373)
T ss_pred CCCCcEEEEeCccHHHHHhh-----cCCCeE--EEEcc-cchhccCCCC----HHHHHHHHHHHH-hCCEEEECCHHHHH
Confidence 55667888888877766532 222343 45432 2222211111 111255566666 89999999998888
Q ss_pred ccC-Cc--ceeE-EeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCC
Q 007438 498 LPK-SV--ICNV-HGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGE 573 (604)
Q Consensus 498 l~k-s~--V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGP 573 (604)
..+ .+ +..| +|||...|.+........+.......+++.|+|++...++++.|.++.+ ..++++++|+|+|+
T Consensus 167 ~~~~~~~~i~~i~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~ 242 (373)
T cd04950 167 AKRRLNPNVVLVPNGVDYEHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVD 242 (373)
T ss_pred HHhhCCCCEEEcccccCHHHhhcccccCCChhHHhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCc
Confidence 543 22 2223 4999888876543211101122345679999999999888876654432 35789999999994
Q ss_pred CHHHHHHHHHhcCC-cEEEcCCCCCCc
Q 007438 574 DAYEVQSAAKRLDL-NLNFQKGRDHAD 599 (604)
Q Consensus 574 DreeLk~~a~~LgL-~V~FtG~ldhad 599 (604)
...+.... .++ +|+|+|.+++.+
T Consensus 243 ~~~~~~~~---~~~~nV~~~G~~~~~~ 266 (373)
T cd04950 243 VSIDPSAL---LRLPNVHYLGPKPYKE 266 (373)
T ss_pred CccChhHh---ccCCCEEEeCCCCHHH
Confidence 44333222 123 899999987654
No 81
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=98.22 E-value=2e-06 Score=77.93 Aligned_cols=76 Identities=25% Similarity=0.311 Sum_probs=67.0
Q ss_pred hhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhcc-CCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCC
Q 007438 521 ATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKND-LDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRD 596 (604)
Q Consensus 521 a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~-~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ld 596 (604)
..+...+.+...++++|+||+.+.||++.|++++..+... .++++|+|+|+|+....++..+..+++ .+.|+|...
T Consensus 4 ~~~~~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 82 (172)
T PF00534_consen 4 KLREKLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVP 82 (172)
T ss_dssp HHHHHTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHS
T ss_pred HHHHHcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccccccccccccccccccccccccccc
Confidence 3445566677899999999999999999999999888764 788999999999999999999999999 899999886
No 82
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=98.14 E-value=4.6e-06 Score=96.60 Aligned_cols=162 Identities=12% Similarity=0.107 Sum_probs=107.7
Q ss_pred CcEEEEcCcchhhhhcchhhhhcCC--CcEEEEEEcChhhHHhhhccch---hHHHHH---------HHHHHHHHHhhCC
Q 007438 421 ADIAILEEPEHLNWYHHGKRWTDKF--NHVVGVVHTNYLEYIKREKNGA---LQAFFV---------KHINNWVTRAYCD 486 (604)
Q Consensus 421 pDVVHLeEPehLGwy~~Garwt~Kf--~PVVgiyHTNY~eYary~~~G~---l~aplv---------R~~~r~~~r~yCd 486 (604)
-|+|-+++ -||-.. +...+.++ .++.+-.|+-|.++--+.-+++ +..-++ ..+.++|++ .|+
T Consensus 148 ~d~vWvhD-YhL~ll--p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~-~~~ 223 (797)
T PLN03063 148 GDVVWCHD-YHLMFL--PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLS-ACT 223 (797)
T ss_pred CCEEEEec-chhhhH--HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHH-HHH
Confidence 38999999 888887 44433333 3877788999997766654442 222233 235677777 788
Q ss_pred ceeeCchhhhhccCC----cceeE-EeecCCCCCCCccch---h-hhh-hccCCCCceEEEEeccccccCHHHHHHHHHH
Q 007438 487 KVLRLSAATQDLPKS----VICNV-HGVNPKFLQIGEKVA---T-DRE-QGQQAFSKGAYFLGKMVWAKGYRELIDLLAK 556 (604)
Q Consensus 487 kVI~LS~avq~l~ks----~V~nV-hGVdp~fF~pg~r~a---~-rr~-~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~ 556 (604)
+++.++.....+... .|..+ .|||+..|.+..... . .+. .......+++++||||.+.||++.+|++|++
T Consensus 224 r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~ 303 (797)
T PLN03063 224 RILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEK 303 (797)
T ss_pred HHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHH
Confidence 888766543332211 12222 399988886533211 0 001 0112257899999999999999999999999
Q ss_pred hhccCCCcE--EEEE-------ecCCCHHHHHHHHHhcC
Q 007438 557 HKNDLDGFK--LDVF-------GNGEDAYEVQSAAKRLD 586 (604)
Q Consensus 557 v~~~~~~~k--LdIV-------GDGPDreeLk~~a~~Lg 586 (604)
+....|+++ ++++ |+||+.++|++.+.++.
T Consensus 304 lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~ 342 (797)
T PLN03063 304 FLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELV 342 (797)
T ss_pred HHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHH
Confidence 887778873 5555 68899999999998875
No 83
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=98.08 E-value=1.1e-05 Score=90.77 Aligned_cols=135 Identities=17% Similarity=0.083 Sum_probs=82.9
Q ss_pred CCCcEEEEcCcchhhhhcchhhhh-cCCC-cEEEEEEcChhhHHhhhccch------hHHH-----------HHHH-HHH
Q 007438 419 KDADIAILEEPEHLNWYHHGKRWT-DKFN-HVVGVVHTNYLEYIKREKNGA------LQAF-----------FVKH-INN 478 (604)
Q Consensus 419 f~pDVVHLeEPehLGwy~~Garwt-~Kf~-PVVgiyHTNY~eYary~~~G~------l~ap-----------lvR~-~~r 478 (604)
.++||+|.++ -+-|+- +...+ .+.. |+|+|+|- -.+.++...|. +... --++ + -
T Consensus 147 ~~~dViH~He-Wm~g~a--~~~lK~~~~~VptVfTtHA--T~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~i-E 220 (590)
T cd03793 147 EPAVVAHFHE-WQAGVG--LPLLRKRKVDVSTIFTTHA--TLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCI-E 220 (590)
T ss_pred CCCeEEEEcc-hhHhHH--HHHHHHhCCCCCEEEEecc--cccccccccCCcccchhhhhcchhhhhhcccchHHHHH-H
Confidence 6799999999 444444 33333 3333 78999982 13444311121 1100 1122 3 3
Q ss_pred HHHHhhCCceeeCchhhhh----ccCCcceeEE--eecCCCCCCCccc------------h-----hhhhhccCCCCceE
Q 007438 479 WVTRAYCDKVLRLSAATQD----LPKSVICNVH--GVNPKFLQIGEKV------------A-----TDREQGQQAFSKGA 535 (604)
Q Consensus 479 ~~~r~yCdkVI~LS~avq~----l~ks~V~nVh--GVdp~fF~pg~r~------------a-----~rr~~g~~~~~Kvv 535 (604)
+.+...||.||+.|+.+.. +.+.+-..|+ ||++..|.+.... . .+..++..++.+++
T Consensus 221 ~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli 300 (590)
T cd03793 221 RAAAHCAHVFTTVSEITAYEAEHLLKRKPDVVLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLY 300 (590)
T ss_pred HHHHhhCCEEEECChHHHHHHHHHhCCCCCEEeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEE
Confidence 3444499999999998877 2233323353 9999999775411 0 12223444566777
Q ss_pred EE-Eecccc-ccCHHHHHHHHHHhhc
Q 007438 536 YF-LGKMVW-AKGYRELIDLLAKHKN 559 (604)
Q Consensus 536 LF-VGRLvw-EKGfD~LLdl~~~v~~ 559 (604)
+| +||+.+ +||+|.||+++.+++.
T Consensus 301 ~f~~GR~e~~nKGiDvlIeAl~rLn~ 326 (590)
T cd03793 301 FFTAGRYEFSNKGADMFLEALARLNY 326 (590)
T ss_pred EEEeeccccccCCHHHHHHHHHHHHH
Confidence 77 799999 9999999999998865
No 84
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.03 E-value=1.8e-05 Score=81.10 Aligned_cols=168 Identities=9% Similarity=0.012 Sum_probs=98.8
Q ss_pred ccccccCCCCCCcEEEEcCcchhhhhcchh-hhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCce
Q 007438 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGK-RWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPehLGwy~~Ga-rwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkV 488 (604)
..++++|.+++||+||..+...+ |..... .+..+ .|+|...|-. .+.. . ....+.+ ..+||+|
T Consensus 75 ~~~~~~l~~~kPdivi~~~~~~~-~~~~a~~a~~~~-ip~i~~~~~~--~~~~------~-----~~~~~~~-~~~~d~i 138 (380)
T PRK00025 75 RRLKRRLLAEPPDVFIGIDAPDF-NLRLEKKLRKAG-IPTIHYVSPS--VWAW------R-----QGRAFKI-AKATDHV 138 (380)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC-CHHHHHHHHHCC-CCEEEEeCCc--hhhc------C-----chHHHHH-HHHHhhh
Confidence 45677799999999999763222 222122 22233 4866333211 1111 0 1112334 3488999
Q ss_pred eeCchhhhhcc-CCcce-eEEeecC-CCCC-CCccchhhhhhccCCCCceE-EEEe-ccccc-cCHHHHHHHHHHhhccC
Q 007438 489 LRLSAATQDLP-KSVIC-NVHGVNP-KFLQ-IGEKVATDREQGQQAFSKGA-YFLG-KMVWA-KGYRELIDLLAKHKNDL 561 (604)
Q Consensus 489 I~LS~avq~l~-ks~V~-nVhGVdp-~fF~-pg~r~a~rr~~g~~~~~Kvv-LFVG-RLvwE-KGfD~LLdl~~~v~~~~ 561 (604)
++.|+..++.. +.++. .++|.+. +.+. ..++...+.+.+.+++.+++ ++.| |.... ++++.++++++.+.+..
T Consensus 139 ~~~~~~~~~~~~~~g~~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~ 218 (380)
T PRK00025 139 LALFPFEAAFYDKLGVPVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRY 218 (380)
T ss_pred eeCCccCHHHHHhcCCCeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 99998766643 32222 2356552 2221 12233344456666566654 4555 55554 45789999998887667
Q ss_pred CCcEEEEEec-CCCHHHHHHHHHhc-CCcEEEcC
Q 007438 562 DGFKLDVFGN-GEDAYEVQSAAKRL-DLNLNFQK 593 (604)
Q Consensus 562 ~~~kLdIVGD-GPDreeLk~~a~~L-gL~V~FtG 593 (604)
++++++++|+ |++++++++.+.++ ++++.+..
T Consensus 219 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (380)
T PRK00025 219 PDLRFVLPLVNPKRREQIEEALAEYAGLEVTLLD 252 (380)
T ss_pred CCeEEEEecCChhhHHHHHHHHhhcCCCCeEEEc
Confidence 7899999986 77889999998887 77666543
No 85
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.97 E-value=1.2e-05 Score=82.62 Aligned_cols=201 Identities=9% Similarity=0.042 Sum_probs=105.8
Q ss_pred HhCCCCCceeeccC-CcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHh
Q 007438 383 RVGFKADFKISFYP-GKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIK 461 (604)
Q Consensus 383 r~g~~~~~~i~fYP-gry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYar 461 (604)
-+|+.+++.+.... |--.+..-. .-+..+.+.+.+++||+||++.+..-++.+.-++...+ .|++++.+.. ..+..
T Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~-ipv~h~~~g~-~s~~~ 125 (365)
T TIGR00236 49 LFHLPPDYDLNIMSPGQTLGEITS-NMLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQ-IPVGHVEAGL-RTGDR 125 (365)
T ss_pred hcCCCCCeeeecCCCCCCHHHHHH-HHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhC-CCEEEEeCCC-CcCCC
Confidence 37777665554421 111111111 12346777799999999999976554454323333344 4876443322 01111
Q ss_pred hhccchhHHHHHHHHHHHHHHhhCCceeeCchhhhhc-cCCcc--eeEE--e---ecCCCCCC--CccchhhhhhccCCC
Q 007438 462 REKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDL-PKSVI--CNVH--G---VNPKFLQI--GEKVATDREQGQQAF 531 (604)
Q Consensus 462 y~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l-~ks~V--~nVh--G---Vdp~fF~p--g~r~a~rr~~g~~~~ 531 (604)
+.+ ....+++++...+||.++++|+..++. .+.++ .+|+ | ++...... ..+...+...+ . .
T Consensus 126 ~~~-------~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~-~-~ 196 (365)
T TIGR00236 126 YSP-------MPEEINRQLTGHIADLHFAPTEQAKDNLLRENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFG-E-D 196 (365)
T ss_pred CCC-------CccHHHHHHHHHHHHhccCCCHHHHHHHHHcCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcC-C-C
Confidence 000 111234555555788999999987773 23232 2232 3 23211111 11112222232 2 2
Q ss_pred CceEEEEe-cc-ccccCHHHHHHHHHHhhccCCCcEEEEEecC-CCHHHHHHHHHhcCC--cEEEcCCCCC
Q 007438 532 SKGAYFLG-KM-VWAKGYRELIDLLAKHKNDLDGFKLDVFGNG-EDAYEVQSAAKRLDL--NLNFQKGRDH 597 (604)
Q Consensus 532 ~KvvLFVG-RL-vwEKGfD~LLdl~~~v~~~~~~~kLdIVGDG-PDreeLk~~a~~LgL--~V~FtG~ldh 597 (604)
+..+++.| |. ..+||++.|++++.++....+++++++.|.| ++..+ .....++. +|.|+|.+..
T Consensus 197 ~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~ 265 (365)
T TIGR00236 197 KRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVRE--PLHKHLGDSKRVHLIEPLEY 265 (365)
T ss_pred CCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHH--HHHHHhCCCCCEEEECCCCh
Confidence 34555555 54 4679999999999888766678888888654 32221 12233344 7999987754
No 86
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.92 E-value=4.7e-05 Score=86.98 Aligned_cols=157 Identities=12% Similarity=0.138 Sum_probs=94.8
Q ss_pred CcEEEEcCcchhhhhcchhhhhcCC--CcEEEEEEcChhh--HHhhhc--------------cchhHHHHHHHHHHHHHH
Q 007438 421 ADIAILEEPEHLNWYHHGKRWTDKF--NHVVGVVHTNYLE--YIKREK--------------NGALQAFFVKHINNWVTR 482 (604)
Q Consensus 421 pDVVHLeEPehLGwy~~Garwt~Kf--~PVVgiyHTNY~e--Yary~~--------------~G~l~aplvR~~~r~~~r 482 (604)
-|+|-+++ -||-.. +...+.+. .++.+-.|+-|.+ +.+-.+ .|+-+..-.++|.+.|.+
T Consensus 134 ~d~vwvhD-Yhl~l~--p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~ 210 (726)
T PRK14501 134 GDVVWVHD-YQLMLL--PAMLRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLR 210 (726)
T ss_pred CCEEEEeC-chhhhH--HHHHHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHH
Confidence 48999999 888777 44333332 2655677999983 333322 233333344455444444
Q ss_pred hhCCceeeCchhhhh--ccCCc--ceeE-EeecCCCCCCCccchh---hhh--hccCCCCceEEEEeccccccCHHHHHH
Q 007438 483 AYCDKVLRLSAATQD--LPKSV--ICNV-HGVNPKFLQIGEKVAT---DRE--QGQQAFSKGAYFLGKMVWAKGYRELID 552 (604)
Q Consensus 483 ~yCdkVI~LS~avq~--l~ks~--V~nV-hGVdp~fF~pg~r~a~---rr~--~g~~~~~KvvLFVGRLvwEKGfD~LLd 552 (604)
++.+...... +.... |..+ .|||+..|.+..+... +.+ .......+++++||||.++||+..+|+
T Consensus 211 -----~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~ 285 (726)
T PRK14501 211 -----VLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLL 285 (726)
T ss_pred -----HcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHH
Confidence 3332211111 22211 2222 3999999876432211 000 011245679999999999999999999
Q ss_pred HHHHhhccCCC----cEEEEEe----cC-CCHHHHHHHHHhc
Q 007438 553 LLAKHKNDLDG----FKLDVFG----NG-EDAYEVQSAAKRL 585 (604)
Q Consensus 553 l~~~v~~~~~~----~kLdIVG----DG-PDreeLk~~a~~L 585 (604)
++.++.+..|+ ++|+++| +| |+.+++++.+.++
T Consensus 286 A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~ 327 (726)
T PRK14501 286 AFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDEL 327 (726)
T ss_pred HHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHH
Confidence 99988766665 5799997 55 7777888777664
No 87
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=97.90 E-value=3.2e-05 Score=84.27 Aligned_cols=161 Identities=13% Similarity=0.058 Sum_probs=93.6
Q ss_pred CcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhh--HHhhhccch-hHHHHHH---------HHHHHHHHhhCCce
Q 007438 421 ADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLE--YIKREKNGA-LQAFFVK---------HINNWVTRAYCDKV 488 (604)
Q Consensus 421 pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~e--Yary~~~G~-l~aplvR---------~~~r~~~r~yCdkV 488 (604)
-|+|.+++ -||-+....-+....-.++.+-.|+-|.. +-+..+... +..-++. .+.+.|.. .|.++
T Consensus 128 ~d~vwvhD-Yhl~l~p~~lr~~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~-~~~~~ 205 (456)
T TIGR02400 128 GDIVWVHD-YHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLS-AVSRE 205 (456)
T ss_pred CCEEEEec-chhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHH-HHHHH
Confidence 48999999 89888842222222213666788999974 434333211 1111111 12333332 33333
Q ss_pred eeCchhhhh--ccC--CcceeE-EeecCCCCCCCccchh-------hhhhccCCCCceEEEEeccccccCHHHHHHHHHH
Q 007438 489 LRLSAATQD--LPK--SVICNV-HGVNPKFLQIGEKVAT-------DREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAK 556 (604)
Q Consensus 489 I~LS~avq~--l~k--s~V~nV-hGVdp~fF~pg~r~a~-------rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~ 556 (604)
+.+...... +.. ..|..+ .|||++.|.+...... .++.. .+.+++++||||...||++.+|+++++
T Consensus 206 l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vIl~VgRLd~~KGi~~ll~A~~~ 283 (456)
T TIGR02400 206 LGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL--KGRKLIIGVDRLDYSKGLPERLLAFER 283 (456)
T ss_pred hCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc--CCCeEEEEccccccccCHHHHHHHHHH
Confidence 322111100 111 111122 3999998865332111 11111 357899999999999999999999999
Q ss_pred hhccCCCc----EEEEE-----ecCCCHHHHHHHHHhc
Q 007438 557 HKNDLDGF----KLDVF-----GNGEDAYEVQSAAKRL 585 (604)
Q Consensus 557 v~~~~~~~----kLdIV-----GDGPDreeLk~~a~~L 585 (604)
+.+..|++ .|+++ |+||+.++|++.++++
T Consensus 284 ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~l 321 (456)
T TIGR02400 284 FLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEEL 321 (456)
T ss_pred HHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHH
Confidence 87666664 57777 6889999999888776
No 88
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=97.68 E-value=0.00014 Score=64.26 Aligned_cols=138 Identities=15% Similarity=0.164 Sum_probs=79.3
Q ss_pred eEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCc
Q 007438 311 NVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADF 390 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~ 390 (604)
+|.++++++-+ -+-.+ |.+|.+.|+ +|+++.+-... .......++.+-. +
T Consensus 1 KIl~i~~~~~~-----~~~~~--~~~L~~~g~-~V~ii~~~~~~-~~~~~~~~i~~~~---------------------~ 50 (139)
T PF13477_consen 1 KILLIGNTPST-----FIYNL--AKELKKRGY-DVHIITPRNDY-EKYEIIEGIKVIR---------------------L 50 (139)
T ss_pred CEEEEecCcHH-----HHHHH--HHHHHHCCC-EEEEEEcCCCc-hhhhHhCCeEEEE---------------------e
Confidence 46777777622 23344 589999999 99999884332 1111112222222 1
Q ss_pred eeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcC-hhhHHhhhccchhH
Q 007438 391 KISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTN-YLEYIKREKNGALQ 469 (604)
Q Consensus 391 ~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTN-Y~eYary~~~G~l~ 469 (604)
+.. -++ +...+.+-.+.+.+++.+|||||++++...+.++.-++...+-.|+|.+.|.. + |.. +. .
T Consensus 51 ~~~---~k~---~~~~~~~~~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~--~~~----~~-~ 117 (139)
T PF13477_consen 51 PSP---RKS---PLNYIKYFRLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDF--YNS----SK-K 117 (139)
T ss_pred cCC---CCc---cHHHHHHHHHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCee--ecC----Cc-h
Confidence 100 000 11112233678889999999999999987777742233333325899999843 3 211 11 1
Q ss_pred HHHHHHHHHHHHHhhCCceeeCc
Q 007438 470 AFFVKHINNWVTRAYCDKVLRLS 492 (604)
Q Consensus 470 aplvR~~~r~~~r~yCdkVI~LS 492 (604)
..+.+++.+++.+ .+|+|++.|
T Consensus 118 ~~~~~~~~~~~~k-~~~~ii~~~ 139 (139)
T PF13477_consen 118 KKLKKFIIKFAFK-RADKIIVQS 139 (139)
T ss_pred HHHHHHHHHHHHH-hCCEEEEcC
Confidence 1155667777777 999888754
No 89
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=97.61 E-value=0.00019 Score=75.95 Aligned_cols=168 Identities=9% Similarity=0.047 Sum_probs=100.8
Q ss_pred cccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceee
Q 007438 411 DTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLR 490 (604)
Q Consensus 411 dI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~ 490 (604)
.+.+.+.+++||+||...=-..++.-.-++...+ .|+| +|..=+.-+.. .+-++.+.+ +||+|++
T Consensus 80 ~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~g-ip~v--~~i~P~~waw~-----------~~~~r~l~~-~~d~v~~ 144 (385)
T TIGR00215 80 EVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPG-IKII--YYISPQVWAWR-----------KWRAKKIEK-ATDFLLA 144 (385)
T ss_pred HHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCC-CCEE--EEeCCcHhhcC-----------cchHHHHHH-HHhHhhc
Confidence 5667799999999999882222322111233333 4866 33221111110 011344444 9999999
Q ss_pred Cchhhhhcc-CCcce-eEEeecC-CCCCC--CccchhhhhhccCCCCceEEEEe--cccc-ccCHHHHHHHHHHhhccCC
Q 007438 491 LSAATQDLP-KSVIC-NVHGVNP-KFLQI--GEKVATDREQGQQAFSKGAYFLG--KMVW-AKGYRELIDLLAKHKNDLD 562 (604)
Q Consensus 491 LS~avq~l~-ks~V~-nVhGVdp-~fF~p--g~r~a~rr~~g~~~~~KvvLFVG--RLvw-EKGfD~LLdl~~~v~~~~~ 562 (604)
.++..+++. +.++. .++|.+. +.+.. .++...+...+.+++.++++++| |... .|++..++++++.+.+..+
T Consensus 145 ~~~~e~~~~~~~g~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p 224 (385)
T TIGR00215 145 ILPFEKAFYQKKNVPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEP 224 (385)
T ss_pred cCCCcHHHHHhcCCCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCC
Confidence 998776643 32222 2345331 12221 23334455666677778877764 8876 7999999999988877778
Q ss_pred CcEEEE-EecCCCHHHHHHHHHhcCC--cEEEcC
Q 007438 563 GFKLDV-FGNGEDAYEVQSAAKRLDL--NLNFQK 593 (604)
Q Consensus 563 ~~kLdI-VGDGPDreeLk~~a~~LgL--~V~FtG 593 (604)
+++++| +++|+..+.+++....++. .+.+.+
T Consensus 225 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 258 (385)
T TIGR00215 225 DLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLID 258 (385)
T ss_pred CeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEEC
Confidence 888755 5777888888887776644 565554
No 90
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.46 E-value=0.0028 Score=58.68 Aligned_cols=106 Identities=25% Similarity=0.349 Sum_probs=76.2
Q ss_pred hCCceeeCchhhhhccC-----CcceeE-EeecCCCCCCCccchhhhhhccCCC--CceEEEEeccccccCHHHHHHHHH
Q 007438 484 YCDKVLRLSAATQDLPK-----SVICNV-HGVNPKFLQIGEKVATDREQGQQAF--SKGAYFLGKMVWAKGYRELIDLLA 555 (604)
Q Consensus 484 yCdkVI~LS~avq~l~k-----s~V~nV-hGVdp~fF~pg~r~a~rr~~g~~~~--~KvvLFVGRLvwEKGfD~LLdl~~ 555 (604)
.++.++..+.......+ ..+..+ -|+++..+... ....... ...++|+||+.+.||++.+++++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~ 222 (381)
T COG0438 150 LADRVIAVSPALKELLEALGVPNKIVVIPNGIDTEKFAPA-------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAA 222 (381)
T ss_pred cccEEEECCHHHHHHHHHhCCCCCceEecCCcCHHHcCcc-------ccCCCcccCceEEEEeeccChhcCHHHHHHHHH
Confidence 57888888887544222 111112 26666666542 0111122 368999999999999999999999
Q ss_pred HhhccCCCcEEEEEecCCC-HHHHHHHHHhcCC--cEEEcCCCC
Q 007438 556 KHKNDLDGFKLDVFGNGED-AYEVQSAAKRLDL--NLNFQKGRD 596 (604)
Q Consensus 556 ~v~~~~~~~kLdIVGDGPD-reeLk~~a~~LgL--~V~FtG~ld 596 (604)
.+....+..++.|+|.|++ .+.+...+.+++. .+.|+|.++
T Consensus 223 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 266 (381)
T COG0438 223 KLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVP 266 (381)
T ss_pred HhhhhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEecccC
Confidence 8887776689999999999 4888888887775 789998876
No 91
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=97.20 E-value=0.0015 Score=72.64 Aligned_cols=64 Identities=13% Similarity=0.043 Sum_probs=48.6
Q ss_pred EeecCCCCCCCccc-------h-hhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCCC----cEEEEEecCC
Q 007438 507 HGVNPKFLQIGEKV-------A-TDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDG----FKLDVFGNGE 573 (604)
Q Consensus 507 hGVdp~fF~pg~r~-------a-~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~----~kLdIVGDGP 573 (604)
.|||+..|...... . .+...+ +.+++++||||.+.||+...|++|.++-+..|+ ++|+++|.+.
T Consensus 255 iGID~~~f~~~~~~~~~~~~~~~lr~~~~---~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~ps 330 (487)
T TIGR02398 255 VGTDPERIRSALAAASIREMMERIRSELA---GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPA 330 (487)
T ss_pred CEecHHHHHHHhcCchHHHHHHHHHHHcC---CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCC
Confidence 39998888553211 1 122222 578999999999999999999999998777776 5899999873
No 92
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.79 E-value=0.0012 Score=57.75 Aligned_cols=57 Identities=28% Similarity=0.394 Sum_probs=43.7
Q ss_pred eEEEEeccccccCHHHHHH-HHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCCcEEEcCCC
Q 007438 534 GAYFLGKMVWAKGYRELID-LLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGR 595 (604)
Q Consensus 534 vvLFVGRLvwEKGfD~LLd-l~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL~V~FtG~l 595 (604)
.+.|+|++...||++.|++ ++.++.+..++++|.|+|+||++ +++.. .-+|.|+|..
T Consensus 4 ~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~~--l~~~~---~~~v~~~g~~ 61 (135)
T PF13692_consen 4 YIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPDE--LKRLR---RPNVRFHGFV 61 (135)
T ss_dssp EEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-H--HCCHH---HCTEEEE-S-
T ss_pred cccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHHH--HHHhc---CCCEEEcCCH
Confidence 5788999999999999999 99999888899999999999992 55551 2289999987
No 93
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=96.76 E-value=0.0038 Score=74.11 Aligned_cols=158 Identities=13% Similarity=0.128 Sum_probs=97.5
Q ss_pred CcEEEEcCcchhhhhcchhhhhcCCC--cEEEEEEcChhhHHhhhccch---hHHHHHH---------HHHHHHHHhhCC
Q 007438 421 ADIAILEEPEHLNWYHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGA---LQAFFVK---------HINNWVTRAYCD 486 (604)
Q Consensus 421 pDVVHLeEPehLGwy~~Garwt~Kf~--PVVgiyHTNY~eYary~~~G~---l~aplvR---------~~~r~~~r~yCd 486 (604)
-|+|-+++ -||-.. +...+.++. ++-+-.|+-|..+--+--+++ +..-++. .+.++|.. .|.
T Consensus 232 gD~VWVHD-YHL~Ll--P~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~-~c~ 307 (934)
T PLN03064 232 GDVVWCHD-YHLMFL--PKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVS-ACT 307 (934)
T ss_pred CCEEEEec-chhhHH--HHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHH-HHH
Confidence 38999999 888777 444433332 655566999985443322221 1111111 14445544 555
Q ss_pred ceeeCchhhhhccCCc-ceeE----EeecCCCCCCCccch-------hhhhhccCCCCceEEEEeccccccCHHHHHHHH
Q 007438 487 KVLRLSAATQDLPKSV-ICNV----HGVNPKFLQIGEKVA-------TDREQGQQAFSKGAYFLGKMVWAKGYRELIDLL 554 (604)
Q Consensus 487 kVI~LS~avq~l~ks~-V~nV----hGVdp~fF~pg~r~a-------~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~ 554 (604)
+++.++.....+.-.+ +..| .|||+..|...-... ..++.. ...+++++|+||...||+...|.+|
T Consensus 308 rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~--~g~kiIlgVDRLD~~KGI~~kL~Af 385 (934)
T PLN03064 308 RILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERF--AGRKVMLGVDRLDMIKGIPQKILAF 385 (934)
T ss_pred HHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHh--CCceEEEEeeccccccCHHHHHHHH
Confidence 5555543222211111 2223 399998886532211 112211 2568999999999999999999999
Q ss_pred HHhhccCCCcE--EEEE-------ecCCCHHHHHHHHHh
Q 007438 555 AKHKNDLDGFK--LDVF-------GNGEDAYEVQSAAKR 584 (604)
Q Consensus 555 ~~v~~~~~~~k--LdIV-------GDGPDreeLk~~a~~ 584 (604)
.++-..+|+|+ ++++ |+||+-++|++.+.+
T Consensus 386 E~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~ 424 (934)
T PLN03064 386 EKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHE 424 (934)
T ss_pred HHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHH
Confidence 99887888874 8888 999999988877764
No 94
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=95.82 E-value=0.08 Score=60.47 Aligned_cols=64 Identities=11% Similarity=0.063 Sum_probs=45.7
Q ss_pred CCCCceEEEEeccccccCHHHHHHHHHHhhc--cC--CCcEEEEEecCCC--------HHHHHHHHHhcCC--cEEEc
Q 007438 529 QAFSKGAYFLGKMVWAKGYRELIDLLAKHKN--DL--DGFKLDVFGNGED--------AYEVQSAAKRLDL--NLNFQ 592 (604)
Q Consensus 529 ~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~--~~--~~~kLdIVGDGPD--------reeLk~~a~~LgL--~V~Ft 592 (604)
.++..++.||+||+.+||.+.++.++.++.+ .. ..+++++.|.|.- .+.+...+++... .|.|.
T Consensus 386 dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~ 463 (601)
T TIGR02094 386 DPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFL 463 (601)
T ss_pred CCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEE
Confidence 3456689999999999999999998877753 21 4589999999984 4555555554112 55554
No 95
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.46 E-value=0.076 Score=59.52 Aligned_cols=54 Identities=6% Similarity=0.094 Sum_probs=45.1
Q ss_pred CCceEEEEe--ccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCH---HHHHHHHHhc
Q 007438 531 FSKGAYFLG--KMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDA---YEVQSAAKRL 585 (604)
Q Consensus 531 ~~KvvLFVG--RLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDr---eeLk~~a~~L 585 (604)
....+.+|| || .||.++.+|+++.++....|+.+|+++|-|.+. +.|++.+.++
T Consensus 318 ~~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~ 376 (519)
T TIGR03713 318 LYETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQI 376 (519)
T ss_pred ccceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHH
Confidence 345677888 99 999999999999999889999999999999765 6666665555
No 96
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=93.66 E-value=0.6 Score=49.40 Aligned_cols=119 Identities=14% Similarity=0.089 Sum_probs=58.7
Q ss_pred ccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceeeC
Q 007438 412 TSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLRL 491 (604)
Q Consensus 412 I~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~L 491 (604)
..+.+++++|||||..- ...+.-...+++-.+ .|++ +|+.- +. ....|+ +...+|++|.+.
T Consensus 83 ~~~i~~~~kPdvvi~~G-gy~s~p~~~aa~~~~-~p~~--i~e~n-~~-------------~g~~nr-~~~~~a~~v~~~ 143 (352)
T PRK12446 83 AYVRIRKLKPDVIFSKG-GFVSVPVVIGGWLNR-VPVL--LHESD-MT-------------PGLANK-IALRFASKIFVT 143 (352)
T ss_pred HHHHHHhcCCCEEEecC-chhhHHHHHHHHHcC-CCEE--EECCC-CC-------------ccHHHH-HHHHhhCEEEEE
Confidence 44559999999999833 222111123344444 4754 33322 11 122333 334488888764
Q ss_pred chhh-hhccCCcceeEEeec-CCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHH
Q 007438 492 SAAT-QDLPKSVICNVHGVN-PKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYREL 550 (604)
Q Consensus 492 S~av-q~l~ks~V~nVhGVd-p~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~L 550 (604)
-+.. +.+++.. ..++|++ ...|...++...++..+..++.+++|.+|==.=.+.+.++
T Consensus 144 f~~~~~~~~~~k-~~~tG~Pvr~~~~~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~ 203 (352)
T PRK12446 144 FEEAAKHLPKEK-VIYTGSPVREEVLKGNREKGLAFLGFSRKKPVITIMGGSLGAKKINET 203 (352)
T ss_pred ccchhhhCCCCC-eEEECCcCCcccccccchHHHHhcCCCCCCcEEEEECCccchHHHHHH
Confidence 4322 2233221 2468988 3333322233334445555666777776544445556443
No 97
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=93.46 E-value=0.06 Score=54.15 Aligned_cols=41 Identities=27% Similarity=0.386 Sum_probs=29.6
Q ss_pred eEEEEecCCCCc-ccc-hh--hhHHHHHHHHhhcCCceEEEEeecCCC
Q 007438 311 NVAIVTTASLPW-MTG-TA--VNPLFRAAYLAKTEQQNVTLLVPWLCK 354 (604)
Q Consensus 311 ~IaIfTTAsLPW-mTG-tA--VnpL~RAayLak~G~~~VtL~vPWl~~ 354 (604)
||.+||.=+-|| .+| .+ +--|- ..|+++|+ +|++++|.|..
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~--kaL~~~G~-~V~Vi~P~y~~ 45 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLP--KALAKQGH-DVRVIMPKYGF 45 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHH--HHHHHTT--EEEEEEE-THH
T ss_pred CEEEEEcccCcccccCcHhHHHHHHH--HHHHhcCC-eEEEEEccchh
Confidence 699999999994 343 44 77776 89999998 99999999963
No 98
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=92.63 E-value=1.5 Score=44.95 Aligned_cols=228 Identities=15% Similarity=0.093 Sum_probs=115.9
Q ss_pred eEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCc
Q 007438 311 NVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADF 390 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~ 390 (604)
+|+|.+||+.=.=+|=++=-|-=|..|.+.|+ +|++++--. .. . +.+.++ ..| +
T Consensus 1 ~i~ir~Da~~~iG~GHv~Rcl~LA~~l~~~g~-~v~f~~~~~----~~------------~----~~~~i~-~~g----~ 54 (279)
T TIGR03590 1 KILFRADASSEIGLGHVMRCLTLARALHAQGA-EVAFACKPL----PG------------D----LIDLLL-SAG----F 54 (279)
T ss_pred CEEEEecCCccccccHHHHHHHHHHHHHHCCC-EEEEEeCCC----CH------------H----HHHHHH-HcC----C
Confidence 58899999966556665545555677777888 888873221 11 1 112221 123 3
Q ss_pred eeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHH
Q 007438 391 KISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQA 470 (604)
Q Consensus 391 ~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~a 470 (604)
+....|+--... --...+...|.+.+||++|+-.......| -...+.+..+++. + +++ ..+
T Consensus 55 ~v~~~~~~~~~~----~d~~~~~~~l~~~~~d~vV~D~y~~~~~~--~~~~k~~~~~l~~-i-DD~---~~~-------- 115 (279)
T TIGR03590 55 PVYELPDESSRY----DDALELINLLEEEKFDILIVDHYGLDADW--EKLIKEFGRKILV-I-DDL---ADR-------- 115 (279)
T ss_pred eEEEecCCCchh----hhHHHHHHHHHhcCCCEEEEcCCCCCHHH--HHHHHHhCCeEEE-E-ecC---CCC--------
Confidence 333333221000 00123556688889999999886444333 2223222123232 2 333 221
Q ss_pred HHHHHHHHHHHHhhCCceeeCchhhhh--ccC---CcceeEEeecCCCCCCCccchhhhhhccCCCCceEEEEecccccc
Q 007438 471 FFVKHINNWVTRAYCDKVLRLSAATQD--LPK---SVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAK 545 (604)
Q Consensus 471 plvR~~~r~~~r~yCdkVI~LS~avq~--l~k---s~V~nVhGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEK 545 (604)
.-+||.||-.+..... +.. .....+.|++=.++++.=.....+....+....+++..|-.-..+
T Consensus 116 -----------~~~~D~vin~~~~~~~~~y~~~~~~~~~~l~G~~Y~~lr~eF~~~~~~~~~~~~~~~iLi~~GG~d~~~ 184 (279)
T TIGR03590 116 -----------PHDCDLLLDQNLGADASDYQGLVPANCRLLLGPSYALLREEFYQLATANKRRKPLRRVLVSFGGADPDN 184 (279)
T ss_pred -----------CcCCCEEEeCCCCcCHhHhcccCcCCCeEEecchHHhhhHHHHHhhHhhhcccccCeEEEEeCCcCCcC
Confidence 0167777655442221 111 112234686422222211000000000012357899999877766
Q ss_pred CHHHHHHHHHHhhccCCCcE-EEEEecC-CCHHHHHHHHHhcCCcEEEcCCCCCC
Q 007438 546 GYRELIDLLAKHKNDLDGFK-LDVFGNG-EDAYEVQSAAKRLDLNLNFQKGRDHA 598 (604)
Q Consensus 546 GfD~LLdl~~~v~~~~~~~k-LdIVGDG-PDreeLk~~a~~LgL~V~FtG~ldha 598 (604)
....+++++.... .+++ .+|+|.| |..++|++.++... ++.++++.++-
T Consensus 185 ~~~~~l~~l~~~~---~~~~i~vv~G~~~~~~~~l~~~~~~~~-~i~~~~~~~~m 235 (279)
T TIGR03590 185 LTLKLLSALAESQ---INISITLVTGSSNPNLDELKKFAKEYP-NIILFIDVENM 235 (279)
T ss_pred HHHHHHHHHhccc---cCceEEEEECCCCcCHHHHHHHHHhCC-CEEEEeCHHHH
Confidence 5667777775432 3333 4588887 78889998877533 67777776543
No 99
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=87.03 E-value=2.2 Score=46.14 Aligned_cols=158 Identities=12% Similarity=0.032 Sum_probs=93.0
Q ss_pred ccCCCC--CCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhc------------cchhHHHHHHHHHHH
Q 007438 414 QFIPSK--DADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREK------------NGALQAFFVKHINNW 479 (604)
Q Consensus 414 r~L~~f--~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~------------~G~l~aplvR~~~r~ 479 (604)
+.+.++ +||+|+..-=.. ...++|..+ .| +.++-|+..+|.-..+ -|....|. - +|.
T Consensus 85 ~~~~~~~~~p~~v~~~Gg~v----~~~aA~~~~-~p-~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~-e--~n~ 155 (396)
T TIGR03492 85 RALRKWAKKGDLIVAVGDIV----PLLFAWLSG-KP-YAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPW-E--RWL 155 (396)
T ss_pred HHHHHHhhcCCEEEEECcHH----HHHHHHHcC-CC-ceEEEeeccceeecCCCCCccchhhhccCCCccCHH-H--HHH
Confidence 347777 899988877333 345567777 68 4556667766661111 12222332 1 466
Q ss_pred HHHhhCCceeeCchhhhhc-cCCccee-EEeec-CCCCCCCccchhhhhhccCCCCceE-EEEec--cccccCHHHHHHH
Q 007438 480 VTRAYCDKVLRLSAATQDL-PKSVICN-VHGVN-PKFLQIGEKVATDREQGQQAFSKGA-YFLGK--MVWAKGYRELIDL 553 (604)
Q Consensus 480 ~~r~yCdkVI~LS~avq~l-~ks~V~n-VhGVd-p~fF~pg~r~a~rr~~g~~~~~Kvv-LFVGR--LvwEKGfD~LLdl 553 (604)
+...+|++|.+..+...+. .++++.. ++|=+ .+.+....+ . +..++.+++ ++=|= -...+++..++++
T Consensus 156 l~~~~a~~v~~~~~~t~~~l~~~g~k~~~vGnPv~d~l~~~~~-----~-~l~~~~~~lllLpGSR~ae~~~~lp~~l~a 229 (396)
T TIGR03492 156 MRSRRCLAVFVRDRLTARDLRRQGVRASYLGNPMMDGLEPPER-----K-PLLTGRFRIALLPGSRPPEAYRNLKLLLRA 229 (396)
T ss_pred hhchhhCEEeCCCHHHHHHHHHCCCeEEEeCcCHHhcCccccc-----c-ccCCCCCEEEEECCCCHHHHHccHHHHHHH
Confidence 7777999999999876664 4444433 25644 233322211 0 223333444 44443 3445678899999
Q ss_pred HHHhhccCCCcEEE-EEecCCCHHHHHHHHHhcCC
Q 007438 554 LAKHKNDLDGFKLD-VFGNGEDAYEVQSAAKRLDL 587 (604)
Q Consensus 554 ~~~v~~~~~~~kLd-IVGDGPDreeLk~~a~~LgL 587 (604)
++.+.+. +++.++ ...++++.+.+++...+.++
T Consensus 230 l~~L~~~-~~~~~v~~~~~~~~~~~~~~~l~~~g~ 263 (396)
T TIGR03492 230 LEALPDS-QPFVFLAAIVPSLSLEKLQAILEDLGW 263 (396)
T ss_pred HHHHhhC-CCeEEEEEeCCCCCHHHHHHHHHhcCc
Confidence 9888655 566544 45477888999888876554
No 100
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=86.94 E-value=3.2 Score=41.31 Aligned_cols=153 Identities=22% Similarity=0.269 Sum_probs=82.9
Q ss_pred ceEEEEecCCCCcccc---hhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCC
Q 007438 310 RNVAIVTTASLPWMTG---TAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGF 386 (604)
Q Consensus 310 r~IaIfTTAsLPWmTG---tAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~ 386 (604)
++|||+=|=-+|--=| |.|+-|. .+|.+.|+ +||++.---....++.-|.+
T Consensus 2 kkIaIiGtrGIPa~YGGfET~ve~L~--~~l~~~g~-~v~Vyc~~~~~~~~~~~y~g----------------------- 55 (185)
T PF09314_consen 2 KKIAIIGTRGIPARYGGFETFVEELA--PRLVSKGI-DVTVYCRSDYYPYKEFEYNG----------------------- 55 (185)
T ss_pred ceEEEEeCCCCCcccCcHHHHHHHHH--HHHhcCCc-eEEEEEccCCCCCCCcccCC-----------------------
Confidence 6899999999988666 4488888 89998898 88887332111222333333
Q ss_pred CCCceeeccCCcccccccC----ccCCccccccCCC--CCCcEEEEcCc----chhhhhcchhhhhcCCCcEEEEEEcCh
Q 007438 387 KADFKISFYPGKFSKERRS----IIPAGDTSQFIPS--KDADIAILEEP----EHLNWYHHGKRWTDKFNHVVGVVHTNY 456 (604)
Q Consensus 387 ~~~~~i~fYPgry~a~~~S----I~p~gdI~r~L~~--f~pDVVHLeEP----ehLGwy~~Garwt~Kf~PVVgiyHTNY 456 (604)
+.+..-|........+ ++.+....+++.+ .+.||+++.-. +.+-+. +.....=.++| ||-
T Consensus 56 ---v~l~~i~~~~~g~~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~---r~~~~~g~~v~----vN~ 125 (185)
T PF09314_consen 56 ---VRLVYIPAPKNGSAESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFL---RKLRKKGGKVV----VNM 125 (185)
T ss_pred ---eEEEEeCCCCCCchHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHH---HhhhhcCCcEE----ECC
Confidence 2222222111111112 1222222222332 35678876553 233333 11111112555 555
Q ss_pred h--hHHhhhccchhHHHHHHHHHHHHHHhhCCceeeCchhhhhccC
Q 007438 457 L--EYIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPK 500 (604)
Q Consensus 457 ~--eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~l~k 500 (604)
+ |+-+ .+.|......+ +++.+++..++|.+|+-|..++++.+
T Consensus 126 DGlEWkR-~KW~~~~k~~l-k~~E~~avk~ad~lIaDs~~I~~y~~ 169 (185)
T PF09314_consen 126 DGLEWKR-AKWGRPAKKYL-KFSEKLAVKYADRLIADSKGIQDYIK 169 (185)
T ss_pred Ccchhhh-hhcCHHHHHHH-HHHHHHHHHhCCEEEEcCHHHHHHHH
Confidence 4 6665 34444443333 45667776699999999999999764
No 101
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=86.55 E-value=18 Score=42.09 Aligned_cols=259 Identities=14% Similarity=0.057 Sum_probs=144.7
Q ss_pred ccccchhhhcccc-----CcccccCcccccCCCCCCCCCCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEe
Q 007438 275 DELDLRIASVLQS-----TGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLV 349 (604)
Q Consensus 275 ~~l~~r~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~v 349 (604)
+..+|+|+--+-+ +-..++---|.++ -+....+.|||+++.---+--.|=+.-+++ .|+-|... +|..+
T Consensus 222 p~~~l~~~~q~~~i~~~~~~~~~~~~~~~~~--~~~~~~rlRvGylS~dlr~Havg~l~~~v~--e~hDRdkf-Evfay- 295 (620)
T COG3914 222 PLKNLAIANQLLKILSQNAPELVRFPIRDEN--IKRNGKRLRVGYLSSDLRSHAVGFLLRWVF--EYHDRDKF-EVFAY- 295 (620)
T ss_pred hhhhHHHHHHHHHHhcccCCCccccccchhh--ccccccceeEEEeccccccchHHHHHHHHH--HHhchhhe-EEEEE-
Confidence 4556666543322 2233344445522 233336789999999999999999999999 99988655 55555
Q ss_pred ecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCceeeccCCcccccccCccCCc--cccccCCCCCCcEEEEc
Q 007438 350 PWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSIIPAG--DTSQFIPSKDADIAILE 427 (604)
Q Consensus 350 PWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~~i~fYPgry~a~~~SI~p~g--dI~r~L~~f~pDVVHLe 427 (604)
.+ . ++ +-..|+.+|+.-+. .||| |.+|. .+...|...++||+|..
T Consensus 296 -~~-g--~~---------~~dal~~rI~a~~~-----------~~~~---------~~~~dd~e~a~~I~~d~IdILvDl 342 (620)
T COG3914 296 -SL-G--PP---------HTDALQERISAAVE-----------KWYP---------IGRMDDAEIANAIRTDGIDILVDL 342 (620)
T ss_pred -ec-C--CC---------CchhHHHHHHHhhh-----------heec---------cCCcCHHHHHHHHHhcCCeEEEec
Confidence 11 1 21 22446666666552 3666 23433 46677888899999887
Q ss_pred CcchhhhhcchhhhhcCCCcEEEEE----EcChhhHHhhh-ccchhHHH-HHHHHHHHHHHhh-CCceeeCchhhhhccC
Q 007438 428 EPEHLNWYHHGKRWTDKFNHVVGVV----HTNYLEYIKRE-KNGALQAF-FVKHINNWVTRAY-CDKVLRLSAATQDLPK 500 (604)
Q Consensus 428 EPehLGwy~~Garwt~Kf~PVVgiy----HTNY~eYary~-~~G~l~ap-lvR~~~r~~~r~y-CdkVI~LS~avq~l~k 500 (604)
+= |- .=....-.+++--||..+. -|.=.-+..|+ ..+.+..| .--+|.-.+.|.- |.
T Consensus 343 ~g-~T-~d~r~~v~A~RpAPiqvswlGy~aT~g~p~~DY~I~D~y~vPp~ae~yysEkl~RLp~cy-------------- 406 (620)
T COG3914 343 DG-HT-VDTRCQVFAHRPAPIQVSWLGYPATTGSPNMDYFISDPYTVPPTAEEYYSEKLWRLPQCY-------------- 406 (620)
T ss_pred cC-ce-eccchhhhhcCCCceEEeecccccccCCCcceEEeeCceecCchHHHHHHHHHHhccccc--------------
Confidence 71 10 0000111233323433222 01100122221 12222223 2233333222221 22
Q ss_pred CcceeEEeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHH---H
Q 007438 501 SVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAY---E 577 (604)
Q Consensus 501 s~V~nVhGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDre---e 577 (604)
. ++ +.|.++-..-.|...|++.+..|-.-. =...|=-..+++.|-++-+..|+-.|.+.|.|++.+ .
T Consensus 407 ~------p~--d~~~~v~p~~sR~~lglp~~avVf~c~--~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~ 476 (620)
T COG3914 407 Q------PV--DGFEPVTPPPSRAQLGLPEDAVVFCCF--NNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINAR 476 (620)
T ss_pred C------CC--CCcccCCCCcchhhcCCCCCeEEEEec--CCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHH
Confidence 0 11 112221111223455666444333333 345677889999999999999999999999998764 5
Q ss_pred HHHHHHhcCC---cEEEcCCCCCC
Q 007438 578 VQSAAKRLDL---NLNFQKGRDHA 598 (604)
Q Consensus 578 Lk~~a~~LgL---~V~FtG~ldha 598 (604)
|+..|++.|+ .++|.+...++
T Consensus 477 l~~la~~~Gv~~eRL~f~p~~~~~ 500 (620)
T COG3914 477 LRDLAEREGVDSERLRFLPPAPNE 500 (620)
T ss_pred HHHHHHHcCCChhheeecCCCCCH
Confidence 7888899999 89999998876
No 102
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=83.35 E-value=5.9 Score=41.39 Aligned_cols=37 Identities=30% Similarity=0.258 Sum_probs=25.7
Q ss_pred ceEEEEecCCCCcccchhhhHHHH-HHHHhhcCCceEEEEeecC
Q 007438 310 RNVAIVTTASLPWMTGTAVNPLFR-AAYLAKTEQQNVTLLVPWL 352 (604)
Q Consensus 310 r~IaIfTTAsLPWmTGtAVnpL~R-AayLak~G~~~VtL~vPWl 352 (604)
|||.++|- |. .|= +||++. |.+|.+.|| +|+++.+-.
T Consensus 1 mrIl~~~~---p~-~GH-v~P~l~la~~L~~rGh-~V~~~t~~~ 38 (401)
T cd03784 1 MRVLITTI---GS-RGD-VQPLVALAWALRAAGH-EVRVATPPE 38 (401)
T ss_pred CeEEEEeC---CC-cch-HHHHHHHHHHHHHCCC-eEEEeeCHh
Confidence 78888875 21 111 777765 356899999 999997753
No 103
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=81.05 E-value=17 Score=40.31 Aligned_cols=107 Identities=18% Similarity=0.162 Sum_probs=69.1
Q ss_pred hCCceeeCchhhhhccCC--cceeEEeec-CCCCCCCccchhhhhhcc-CCCCceEEEEeccccccCHHHHHHHHHHhhc
Q 007438 484 YCDKVLRLSAATQDLPKS--VICNVHGVN-PKFLQIGEKVATDREQGQ-QAFSKGAYFLGKMVWAKGYRELIDLLAKHKN 559 (604)
Q Consensus 484 yCdkVI~LS~avq~l~ks--~V~nVhGVd-p~fF~pg~r~a~rr~~g~-~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~ 559 (604)
.+|-|++.|+=+++..++ ....++-|. |.--+ ......+. ......+++||..-+||+-. +|++++.+..
T Consensus 222 ~ad~vm~NssWT~nHI~qiW~~~~~~iVyPPC~~e-----~lks~~~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~ 295 (465)
T KOG1387|consen 222 KADIVMTNSSWTNNHIKQIWQSNTCSIVYPPCSTE-----DLKSKFGTEGERENQLLSLAQFRPEKNHK-ILQLFALYLK 295 (465)
T ss_pred cceEEEecchhhHHHHHHHhhccceeEEcCCCCHH-----HHHHHhcccCCcceEEEEEeecCcccccH-HHHHHHHHHh
Confidence 478899999988885542 113344443 33332 11111222 34567899999999999998 6677766644
Q ss_pred cC------CCcEEEEEecCCCHH------HHHHHHHhcCC--cEEEcCCCC
Q 007438 560 DL------DGFKLDVFGNGEDAY------EVQSAAKRLDL--NLNFQKGRD 596 (604)
Q Consensus 560 ~~------~~~kLdIVGDGPDre------eLk~~a~~LgL--~V~FtG~ld 596 (604)
.. +..+|.|||+=-.++ .||..+.+|++ +|.|.-.+.
T Consensus 296 ~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~P 346 (465)
T KOG1387|consen 296 NEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVP 346 (465)
T ss_pred cCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCC
Confidence 33 347999999854332 46778888888 788865543
No 104
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=79.54 E-value=29 Score=38.89 Aligned_cols=164 Identities=16% Similarity=0.090 Sum_probs=98.3
Q ss_pred ccccCCCCCCcEEEEcCcc-hhhhhcchhhhhcCCCcEEEEE-EcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCcee
Q 007438 412 TSQFIPSKDADIAILEEPE-HLNWYHHGKRWTDKFNHVVGVV-HTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVL 489 (604)
Q Consensus 412 I~r~L~~f~pDVVHLeEPe-hLGwy~~Garwt~Kf~PVVgiy-HTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI 489 (604)
+.+++...+||++|+.|=| ..|... ..-.++ .|+|-+= --.=.+|.+|-+ .+.+.+.+.. .++.|+
T Consensus 115 v~rFl~~~~P~l~Ii~EtElWPnli~--e~~~~~-~p~~LvNaRLS~rS~~~y~k--------~~~~~~~~~~-~i~li~ 182 (419)
T COG1519 115 VRRFLRKWRPKLLIIMETELWPNLIN--ELKRRG-IPLVLVNARLSDRSFARYAK--------LKFLARLLFK-NIDLIL 182 (419)
T ss_pred HHHHHHhcCCCEEEEEeccccHHHHH--HHHHcC-CCEEEEeeeechhhhHHHHH--------HHHHHHHHHH-hcceee
Confidence 7778999999988877633 333332 112223 2422111 011113333311 2223344444 788899
Q ss_pred eCchhhhh-ccCCcceeE--EeecCCCCCCCc-----cchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccC
Q 007438 490 RLSAATQD-LPKSVICNV--HGVNPKFLQIGE-----KVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDL 561 (604)
Q Consensus 490 ~LS~avq~-l~ks~V~nV--hGVdp~fF~pg~-----r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~ 561 (604)
+=|+.+.+ +..-++.+| +| |.+|.-... ..+..+...... .++..+.+= ++.-=+.++++++.+.+..
T Consensus 183 aQse~D~~Rf~~LGa~~v~v~G-NlKfd~~~~~~~~~~~~~~r~~l~~~-r~v~iaaST--H~GEeei~l~~~~~l~~~~ 258 (419)
T COG1519 183 AQSEEDAQRFRSLGAKPVVVTG-NLKFDIEPPPQLAAELAALRRQLGGH-RPVWVAAST--HEGEEEIILDAHQALKKQF 258 (419)
T ss_pred ecCHHHHHHHHhcCCcceEEec-ceeecCCCChhhHHHHHHHHHhcCCC-CceEEEecC--CCchHHHHHHHHHHHHhhC
Confidence 99998776 333233333 33 333332211 112233333333 788888886 7777777999999999999
Q ss_pred CCcEEEEEecCCCH-HHHHHHHHhcCCcEEE
Q 007438 562 DGFKLDVFGNGEDA-YEVQSAAKRLDLNLNF 591 (604)
Q Consensus 562 ~~~kLdIVGDGPDr-eeLk~~a~~LgL~V~F 591 (604)
++..|.+|=-=||+ +++.+++++.|+.+..
T Consensus 259 ~~~llIlVPRHpERf~~v~~l~~~~gl~~~~ 289 (419)
T COG1519 259 PNLLLILVPRHPERFKAVENLLKRKGLSVTR 289 (419)
T ss_pred CCceEEEecCChhhHHHHHHHHHHcCCeEEe
Confidence 99999999988887 6789999999996544
No 105
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=78.10 E-value=14 Score=39.95 Aligned_cols=160 Identities=19% Similarity=0.117 Sum_probs=81.5
Q ss_pred cccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCceee
Q 007438 411 DTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKVLR 490 (604)
Q Consensus 411 dI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkVI~ 490 (604)
..++.|++++||+|+---++.-+=- .-+++..+ .|++. .-+|+ ... ..|+++.+ +|++|-.
T Consensus 82 ~a~~il~~~kPd~vig~Ggyvs~P~-~~Aa~~~~-iPv~i-hEqn~--~~G-------------~ank~~~~-~a~~V~~ 142 (357)
T COG0707 82 QARKILKKLKPDVVIGTGGYVSGPV-GIAAKLLG-IPVII-HEQNA--VPG-------------LANKILSK-FAKKVAS 142 (357)
T ss_pred HHHHHHHHcCCCEEEecCCccccHH-HHHHHhCC-CCEEE-EecCC--Ccc-------------hhHHHhHH-hhceeee
Confidence 4455599999999876443221111 01233334 59554 44777 222 23333333 6766655
Q ss_pred CchhhhhccCCcceeEEeec--CCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHH-HHHHhhccCCCcE-E
Q 007438 491 LSAATQDLPKSVICNVHGVN--PKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELID-LLAKHKNDLDGFK-L 566 (604)
Q Consensus 491 LS~avq~l~ks~V~nVhGVd--p~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLd-l~~~v~~~~~~~k-L 566 (604)
.-.....+....-..++|++ +.+++ ......+..+.. +.++++.+|==-=.+.+..++. +...+.+ ++. +
T Consensus 143 ~f~~~~~~~~~~~~~~tG~Pvr~~~~~--~~~~~~~~~~~~-~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~---~~~v~ 216 (357)
T COG0707 143 AFPKLEAGVKPENVVVTGIPVRPEFEE--LPAAEVRKDGRL-DKKTILVTGGSQGAKALNDLVPEALAKLAN---RIQVI 216 (357)
T ss_pred ccccccccCCCCceEEecCcccHHhhc--cchhhhhhhccC-CCcEEEEECCcchhHHHHHHHHHHHHHhhh---CeEEE
Confidence 44432333322123457877 44444 222222233222 5677777765444444544443 2223222 343 5
Q ss_pred EEEecCCCHHHHHHHHHhcCCcEEEcCCCCC
Q 007438 567 DVFGNGEDAYEVQSAAKRLDLNLNFQKGRDH 597 (604)
Q Consensus 567 dIVGDGPDreeLk~~a~~LgL~V~FtG~ldh 597 (604)
.+.|.+. .++++..-.+++. +...++.++
T Consensus 217 ~~~G~~~-~~~~~~~~~~~~~-~~v~~f~~d 245 (357)
T COG0707 217 HQTGKND-LEELKSAYNELGV-VRVLPFIDD 245 (357)
T ss_pred EEcCcch-HHHHHHHHhhcCc-EEEeeHHhh
Confidence 5556655 6788887777776 777766654
No 106
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=70.92 E-value=11 Score=45.44 Aligned_cols=159 Identities=17% Similarity=0.115 Sum_probs=90.1
Q ss_pred cEEEEcCcchhhhhcchhhhhcCCC--cEEEEEEcChhhHHhhhccch---hHHHHHH---------HHHHHHHHhhCCc
Q 007438 422 DIAILEEPEHLNWYHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGA---LQAFFVK---------HINNWVTRAYCDK 487 (604)
Q Consensus 422 DVVHLeEPehLGwy~~Garwt~Kf~--PVVgiyHTNY~eYary~~~G~---l~aplvR---------~~~r~~~r~yCdk 487 (604)
|+|-+++ -||-.. +...+.++. ++.+-.|+-|..+--+--+++ +..-++. .+.+.|.. .|.+
T Consensus 203 d~VWVhD-YhL~ll--P~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~-~~~r 278 (854)
T PLN02205 203 DFVWIHD-YHLMVL--PTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLS-CCSR 278 (854)
T ss_pred CEEEEeC-chhhHH--HHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHH-HHHH
Confidence 8999999 888777 444444433 655567999984443322221 1111111 14444444 4545
Q ss_pred eeeCchhhhh------cc-CCcceeE--EeecCCCCCCCcc-------chhhhhhccCCCCceEEEEeccccccCHHHHH
Q 007438 488 VLRLSAATQD------LP-KSVICNV--HGVNPKFLQIGEK-------VATDREQGQQAFSKGAYFLGKMVWAKGYRELI 551 (604)
Q Consensus 488 VI~LS~avq~------l~-ks~V~nV--hGVdp~fF~pg~r-------~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LL 551 (604)
++-+.-.... +. +.....+ .||++..|+..-. ....++.......++++-|.||-+-||+..=|
T Consensus 279 ~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl 358 (854)
T PLN02205 279 MLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKL 358 (854)
T ss_pred HhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHH
Confidence 5444321110 11 1111112 3999887744211 11111111113578999999999999999999
Q ss_pred HHHHHhhccCCCc----EEEEE-----ecCCCHHHHHHHHHh
Q 007438 552 DLLAKHKNDLDGF----KLDVF-----GNGEDAYEVQSAAKR 584 (604)
Q Consensus 552 dl~~~v~~~~~~~----kLdIV-----GDGPDreeLk~~a~~ 584 (604)
.+|.++-..+|.| .|+-+ +++++-+++++.+.+
T Consensus 359 ~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 359 LAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred HHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 9999987777876 34433 467777777766554
No 107
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=69.03 E-value=75 Score=36.48 Aligned_cols=247 Identities=14% Similarity=0.083 Sum_probs=128.8
Q ss_pred CCCCCCCCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHH
Q 007438 302 KDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLE 381 (604)
Q Consensus 302 ~~~~~~~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~ 381 (604)
++.++|.+-+|-++|+-+...- + .-|+|--..+..|.-.|+.+..|+|...- .|++
T Consensus 66 ~lg~~d~G~qV~~l~~h~~al~-~---~~~~~~~~~~l~~~~~i~vv~~~lP~~~~--------------------~~~~ 121 (495)
T KOG0853|consen 66 VLGLPDTGGQVVYLTSHEDALE-M---PLLLRCFAETLDGTPPILVVGDWLPRAMG--------------------QFLE 121 (495)
T ss_pred ccCCCCCCceEEEEehhhhhhc-c---hHHHHHHHHHhcCCCceEEEEeecCcccc--------------------hhhh
Confidence 5667888999999999887754 2 23456666677785699999999976431 1111
Q ss_pred HHhCCC--CCceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhc-C-CCcEEEEEEcChh
Q 007438 382 ERVGFK--ADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTD-K-FNHVVGVVHTNYL 457 (604)
Q Consensus 382 ~r~g~~--~~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~-K-f~PVVgiyHTNY~ 457 (604)
+-+++. .-+.++||+-+.. + ++.|+++...=..-.|. ++.... . ..-+.++.|.+=.
T Consensus 122 ~~~~~~~~~il~~~~~~~~k~---------------~--~~~d~~i~d~~~~~~~l--~~~~~~p~~~~~i~~~~h~~~~ 182 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFGILFKW---------------A--EKVDPIIEDFVSACVPL--LKQLSGPDVIIKIYFYCHFPDS 182 (495)
T ss_pred hhhccceeEEEEeccchhhhh---------------h--hhhceeecchHHHHHHH--HHHhcCCcccceeEEeccchHH
Confidence 212221 1144444332222 2 34555444332222233 221111 0 1112455555555
Q ss_pred hHHhhhc---------cchhHHHHHHH----H--HHHHHHhhCCceeeCchhhhhccCCcceeEEeecCCCCCCCcc---
Q 007438 458 EYIKREK---------NGALQAFFVKH----I--NNWVTRAYCDKVLRLSAATQDLPKSVICNVHGVNPKFLQIGEK--- 519 (604)
Q Consensus 458 eYary~~---------~G~l~aplvR~----~--~r~~~r~yCdkVI~LS~avq~l~ks~V~nVhGVdp~fF~pg~r--- 519 (604)
-|+++-+ ++++....+.. + .+...+.+|.-++.|+... +...+-+|+.+.+.++..
T Consensus 183 lla~r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d------~~~~y~ei~~s~~~~~~~~~~ 256 (495)
T KOG0853|consen 183 LLAKRLGVLKVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD------ITSTYPEIDGSWFTYGQYESH 256 (495)
T ss_pred HhccccCccceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC------cceeeccccchhccccccccc
Confidence 5555532 22222221110 0 0111222333333333321 122233777666654221
Q ss_pred ----chhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCC-----CcEEEEEec-C---------CCHHHHHH
Q 007438 520 ----VATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLD-----GFKLDVFGN-G---------EDAYEVQS 580 (604)
Q Consensus 520 ----~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~-----~~kLdIVGD-G---------PDreeLk~ 580 (604)
...+...+-...+....-+-|....||++..++.+.......+ ...+.++|+ | ...++|++
T Consensus 257 ~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~ 336 (495)
T KOG0853|consen 257 LELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLS 336 (495)
T ss_pred hhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHH
Confidence 1111223334445667778889999999999999988776653 357777773 2 22457888
Q ss_pred HHHhcCC---cEEEcCCCCC
Q 007438 581 AAKRLDL---NLNFQKGRDH 597 (604)
Q Consensus 581 ~a~~LgL---~V~FtG~ldh 597 (604)
.+.+++| .|.|+...+.
T Consensus 337 lie~~~l~g~~v~~~~s~~~ 356 (495)
T KOG0853|consen 337 LIEEYDLLGQFVWFLPSTTR 356 (495)
T ss_pred HHHHhCccCceEEEecCCch
Confidence 8898888 6777665543
No 108
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=68.01 E-value=18 Score=40.97 Aligned_cols=159 Identities=9% Similarity=0.067 Sum_probs=84.8
Q ss_pred CcEEEEcCcchhhhhcchhhhhcC-C-CcEEEEEEcChhhHHhhhccch---hHHHHHH---------HHHHHHHHhhCC
Q 007438 421 ADIAILEEPEHLNWYHHGKRWTDK-F-NHVVGVVHTNYLEYIKREKNGA---LQAFFVK---------HINNWVTRAYCD 486 (604)
Q Consensus 421 pDVVHLeEPehLGwy~~Garwt~K-f-~PVVgiyHTNY~eYary~~~G~---l~aplvR---------~~~r~~~r~yCd 486 (604)
-|+|-+++ -||-..+ ...+.+ - .++-+-.|+-|..+--+--+++ +..-++. .+.+.|.. .|.
T Consensus 124 ~D~VWVHD-YhL~llp--~~LR~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~-~~~ 199 (474)
T PRK10117 124 DDIIWIHD-YHLLPFA--SELRKRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLD-CLS 199 (474)
T ss_pred CCEEEEec-cHhhHHH--HHHHHhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHH-HHH
Confidence 38999999 8887773 333222 2 3666666998884433322221 1111111 13444444 344
Q ss_pred ceeeCchhhhh---ccCCcceeE----EeecCCCCCCCccchh--h-hhhc-cCCCCceEEEEeccccccCHHHHHHHHH
Q 007438 487 KVLRLSAATQD---LPKSVICNV----HGVNPKFLQIGEKVAT--D-REQG-QQAFSKGAYFLGKMVWAKGYRELIDLLA 555 (604)
Q Consensus 487 kVI~LS~avq~---l~ks~V~nV----hGVdp~fF~pg~r~a~--r-r~~g-~~~~~KvvLFVGRLvwEKGfD~LLdl~~ 555 (604)
++.-+...... .... ...| .|||+..|...-.... + .+.. .-...++++-|.||-+-||+..=+.+|.
T Consensus 200 ~~lg~~~~~~~~v~~~gr-~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe 278 (474)
T PRK10117 200 NLTRVTTRSGKSHTAWGK-AFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYE 278 (474)
T ss_pred HHcCCcccCCCeEEECCe-EEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHH
Confidence 43333221100 1111 1122 3999887744211111 1 0100 0124789999999999999999999999
Q ss_pred HhhccCCCc----EEEEE-----ecCCCHHHHHHHHHh
Q 007438 556 KHKNDLDGF----KLDVF-----GNGEDAYEVQSAAKR 584 (604)
Q Consensus 556 ~v~~~~~~~----kLdIV-----GDGPDreeLk~~a~~ 584 (604)
++-+..|+| .|+-+ ++.++=+++++.+.+
T Consensus 279 ~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~ 316 (474)
T PRK10117 279 ALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLET 316 (474)
T ss_pred HHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHH
Confidence 988777775 35444 344444556555543
No 109
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=67.11 E-value=14 Score=41.57 Aligned_cols=146 Identities=11% Similarity=0.112 Sum_probs=65.1
Q ss_pred ccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC--CcEEEEEEcChhh--HHhhhcc--------------chhHHHHH
Q 007438 412 TSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF--NHVVGVVHTNYLE--YIKREKN--------------GALQAFFV 473 (604)
Q Consensus 412 I~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf--~PVVgiyHTNY~e--Yary~~~--------------G~l~aplv 473 (604)
+.+.+. +-|+|-+++ -||-... ...+.+. .++..-.||-|.. +.+-.+. |+-...-.
T Consensus 135 i~~~~~--~~D~VWVhD-YhL~llP--~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~ 209 (474)
T PF00982_consen 135 IAEVYR--PGDLVWVHD-YHLMLLP--QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYA 209 (474)
T ss_dssp HGGG----TT-EEEEES-GGGTTHH--HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHH
T ss_pred HHHhCc--CCCEEEEeC-CcHHHHH--HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHH
Confidence 333344 468999999 8888773 3333333 3766778999984 4443221 23333334
Q ss_pred HHHHHHHHHhhCCceeeCch-hhhhccCCcceeE--EeecCCCCCCCc-------cchhhhhhccCCCCceEEEEecccc
Q 007438 474 KHINNWVTRAYCDKVLRLSA-ATQDLPKSVICNV--HGVNPKFLQIGE-------KVATDREQGQQAFSKGAYFLGKMVW 543 (604)
Q Consensus 474 R~~~r~~~r~yCdkVI~LS~-avq~l~ks~V~nV--hGVdp~fF~pg~-------r~a~rr~~g~~~~~KvvLFVGRLvw 543 (604)
++|.+.|.+.+. .-+.... .+.--.+.....+ .|||++.|.... +....++. .+.+.++++-|.||.+
T Consensus 210 ~nFl~~~~r~lg-~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~-~~~~~~ii~gvDrld~ 287 (474)
T PF00982_consen 210 RNFLSCCKRLLG-LEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREK-FKGKRKIIVGVDRLDY 287 (474)
T ss_dssp HHHHHHHHHHS--EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHH-TTT-SEEEEEE--B-G
T ss_pred HHHHHHHHHHcC-CcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHh-cCCCcEEEEEeccchh
Confidence 445444444221 1111110 1111111111122 399987774311 11111111 1223589999999999
Q ss_pred ccCHHHHHHHHHHhhccCCCc
Q 007438 544 AKGYRELIDLLAKHKNDLDGF 564 (604)
Q Consensus 544 EKGfD~LLdl~~~v~~~~~~~ 564 (604)
-||+..=+.+|.++-+..|++
T Consensus 288 ~kGi~~kl~Afe~fL~~~P~~ 308 (474)
T PF00982_consen 288 TKGIPEKLRAFERFLERYPEY 308 (474)
T ss_dssp GG-HHHHHHHHHHHHHH-GGG
T ss_pred hcCHHHHHHHHHHHHHhCcCc
Confidence 999999999998887666653
No 110
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=65.97 E-value=12 Score=40.15 Aligned_cols=124 Identities=10% Similarity=0.122 Sum_probs=67.1
Q ss_pred hhcccCCCccccccCCCccccchhhhccccCcccccCcccccCC-CCCCCC--CCceEEEEecCCCCcccchhhhHHHHH
Q 007438 258 RSIAGGECSVLENDNINDELDLRIASVLQSTGHHYEGGFWTDFG-KDDLSD--KKRNVAIVTTASLPWMTGTAVNPLFRA 334 (604)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~r~IaIfTTAsLPWmTGtAVnpL~RA 334 (604)
+.+|....-.+-..+.+.+|--+||..|.-.=...+-.-..|.. ...+.+ .+.+|.|+-+.+.|- +---++-|+=+
T Consensus 14 ~~~~~~~~~~i~~g~~~~~la~~ia~~lg~~l~~~~~~~FpDGE~~v~i~~~vrg~~V~ivqs~~~p~-nd~l~eLll~~ 92 (330)
T PRK02812 14 PLLSDNNRLRLFSGSSNPALAQEVARYLGMDLGPMIRKRFADGELYVQIQESIRGCDVYLIQPTCAPV-NDHLMELLIMV 92 (330)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHhCCCceeeEEEECCCCCEEEEeCCCCCCCEEEEECCCCCCc-cHHHHHHHHHH
Confidence 44444333333334555667777777664221111111111111 112212 357899999977662 11125555555
Q ss_pred HHHhhcCCceEEEEeecCCCCCcccccC-CceeCChhHHHHHHHHHHHHHhCCCC
Q 007438 335 AYLAKTEQQNVTLLVPWLCKSDQELVYP-NVTFCSPEEQENYMRNWLEERVGFKA 388 (604)
Q Consensus 335 ayLak~G~~~VtL~vPWl~~~dqe~vyp-n~rF~SpeeQe~~ir~wl~~r~g~~~ 388 (604)
.-|.+.|-.+||+|+|+|+=+-|...+. +.-+.. .++.+.| +.+|+..
T Consensus 93 ~alr~~ga~ri~~ViPYl~YaRQDr~~~~~e~isa-----k~vA~lL-~~~g~d~ 141 (330)
T PRK02812 93 DACRRASARQITAVIPYYGYARADRKTAGRESITA-----KLVANLI-TKAGADR 141 (330)
T ss_pred HHHHHhCCceEEEEEecccccccccccCCCCCchH-----HHHHHHH-HhcCCCE
Confidence 6667778789999999999766754322 222332 5677777 4567653
No 111
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=60.48 E-value=28 Score=35.11 Aligned_cols=141 Identities=15% Similarity=0.052 Sum_probs=66.1
Q ss_pred ccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChhhH-HhhhccchhHHHHHHHHHHHHHHhhCCc
Q 007438 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYLEY-IKREKNGALQAFFVKHINNWVTRAYCDK 487 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~eY-ary~~~G~l~aplvR~~~r~~~r~yCdk 487 (604)
.++.+.+.+++||+||.-......+. ++.. .|+|++-|-....+ ................+........|+.
T Consensus 84 ~~~~~~l~~~~pDlVIsD~~~~~~~a------a~~~giP~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (318)
T PF13528_consen 84 RREIRWLREFRPDLVISDFYPLAALA------ARRAGIPVIVISNQYWFLHPNFWLPWDQDFGRLIERYIDRYHFPPADR 157 (318)
T ss_pred HHHHHHHHhcCCCEEEEcChHHHHHH------HHhcCCCEEEEEehHHcccccCCcchhhhHHHHHHHhhhhccCCcccc
Confidence 45667789999999888864443322 2332 49898887765421 1111111111111111111111123443
Q ss_pred eeeCchhhhhccCCcceeEEeecCCCCCCCccchhhhhhccCCCCceEEEEeccccccCHHHHHHHHHHhhccCCCcEEE
Q 007438 488 VLRLSAATQDLPKSVICNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLD 567 (604)
Q Consensus 488 VI~LS~avq~l~ks~V~nVhGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLd 567 (604)
.+.++-....... .++. +..+.-+.. ...........++.|+|-.... .++++++. .+++.++
T Consensus 158 ~l~~~~~~~~~~~---~~~~-----~~~p~~~~~-~~~~~~~~~~~iLv~~gg~~~~----~~~~~l~~----~~~~~~~ 220 (318)
T PF13528_consen 158 RLALSFYPPLPPF---FRVP-----FVGPIIRPE-IRELPPEDEPKILVYFGGGGPG----DLIEALKA----LPDYQFI 220 (318)
T ss_pred eecCCcccccccc---cccc-----ccCchhccc-ccccCCCCCCEEEEEeCCCcHH----HHHHHHHh----CCCCeEE
Confidence 4444332111101 1111 111100100 0011113456799999998777 55555543 4578899
Q ss_pred EEecCC
Q 007438 568 VFGNGE 573 (604)
Q Consensus 568 IVGDGP 573 (604)
++|.+.
T Consensus 221 v~g~~~ 226 (318)
T PF13528_consen 221 VFGPNA 226 (318)
T ss_pred EEcCCc
Confidence 997764
No 112
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=59.35 E-value=23 Score=36.81 Aligned_cols=78 Identities=9% Similarity=-0.033 Sum_probs=51.7
Q ss_pred CCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChh--hHHhhhccchh-----HHHHHHH---HHHHHHHhhCCcee
Q 007438 420 DADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYL--EYIKREKNGAL-----QAFFVKH---INNWVTRAYCDKVL 489 (604)
Q Consensus 420 ~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~--eYary~~~G~l-----~aplvR~---~~r~~~r~yCdkVI 489 (604)
++||+|.++=.-=|..+...++..+ .|++-|+|=-|. -|+......++ ...+|.. ....+|+.+||.|+
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g-~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYG-RPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhC-CCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 4799999997666666444444444 599999999986 44444444444 2223322 23556677999999
Q ss_pred eCchhhhhc
Q 007438 490 RLSAATQDL 498 (604)
Q Consensus 490 ~LS~avq~l 498 (604)
.+.+.-+..
T Consensus 251 ~l~~~n~~~ 259 (268)
T PF11997_consen 251 PLYEYNREW 259 (268)
T ss_pred ccchhhHHH
Confidence 999976554
No 113
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=57.93 E-value=5.2 Score=44.90 Aligned_cols=22 Identities=32% Similarity=0.388 Sum_probs=19.4
Q ss_pred hhHHHHHHHHhhcCCceEEEEeecC
Q 007438 328 VNPLFRAAYLAKTEQQNVTLLVPWL 352 (604)
Q Consensus 328 VnpL~RAayLak~G~~~VtL~vPWl 352 (604)
+.++. ..|++.|| +||++.|..
T Consensus 38 ~~~l~--~~La~rGH-~VTvi~p~~ 59 (507)
T PHA03392 38 FKVYV--EALAERGH-NVTVIKPTL 59 (507)
T ss_pred HHHHH--HHHHHcCC-eEEEEeccc
Confidence 67777 99999999 999999964
No 114
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=52.63 E-value=34 Score=33.74 Aligned_cols=44 Identities=16% Similarity=0.320 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhhCCceeeCchhhhh-cc---CCcceeEE-eecCCCCC
Q 007438 472 FVKHINNWVTRAYCDKVLRLSAATQD-LP---KSVICNVH-GVNPKFLQ 515 (604)
Q Consensus 472 lvR~~~r~~~r~yCdkVI~LS~avq~-l~---ks~V~nVh-GVdp~fF~ 515 (604)
-+|.+++.+.-..||..|++|.==+. +| ++.|..|| |||++.|+
T Consensus 123 r~rN~~~l~~l~~~D~~isPT~wQ~~~fP~~~r~kI~VihdGiDt~~~r 171 (171)
T PF12000_consen 123 RMRNAHNLLALEQADAGISPTRWQRSQFPAEFRSKISVIHDGIDTDRFR 171 (171)
T ss_pred HHHhHHHHHHHHhCCcCcCCCHHHHHhCCHHHHcCcEEeecccchhhcC
Confidence 35668888888999999999994333 44 36777787 99988763
No 115
>PRK14974 cell division protein FtsY; Provisional
Probab=51.07 E-value=31 Score=37.28 Aligned_cols=92 Identities=17% Similarity=0.302 Sum_probs=48.2
Q ss_pred CceEEEEecCCCCcccchh----hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHh
Q 007438 309 KRNVAIVTTASLPWMTGTA----VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERV 384 (604)
Q Consensus 309 ~r~IaIfTTAsLPWmTGtA----VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~ 384 (604)
+..|.+||- ++|+= +.-|- .+|.+.|+ +|.++. +|- +|=. ..+| ++.|.+.
T Consensus 139 ~~~vi~~~G-----~~GvGKTTtiakLA--~~l~~~g~-~V~li~-----~Dt------~R~~-a~eq---L~~~a~~-- 193 (336)
T PRK14974 139 KPVVIVFVG-----VNGTGKTTTIAKLA--YYLKKNGF-SVVIAA-----GDT------FRAG-AIEQ---LEEHAER-- 193 (336)
T ss_pred CCeEEEEEc-----CCCCCHHHHHHHHH--HHHHHcCC-eEEEec-----CCc------CcHH-HHHH---HHHHHHH--
Confidence 346666765 34543 44344 67777777 777762 221 1111 2234 3445533
Q ss_pred CCCCCceeeccCCcccccccCccCCccccccCCCCCCcEEEEcCcchh
Q 007438 385 GFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHL 432 (604)
Q Consensus 385 g~~~~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehL 432 (604)
+.++++++.+...+.++. -+..+.+...+.|+|++-|+..+
T Consensus 194 -----lgv~v~~~~~g~dp~~v~--~~ai~~~~~~~~DvVLIDTaGr~ 234 (336)
T PRK14974 194 -----LGVKVIKHKYGADPAAVA--YDAIEHAKARGIDVVLIDTAGRM 234 (336)
T ss_pred -----cCCceecccCCCCHHHHH--HHHHHHHHhCCCCEEEEECCCcc
Confidence 344566766665554421 12222334457899999997554
No 116
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=50.73 E-value=31 Score=36.40 Aligned_cols=72 Identities=18% Similarity=0.350 Sum_probs=47.1
Q ss_pred CceEEEE-ecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCccccc-CCceeCChhHHHHHHHHHHHHHhCC
Q 007438 309 KRNVAIV-TTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVY-PNVTFCSPEEQENYMRNWLEERVGF 386 (604)
Q Consensus 309 ~r~IaIf-TTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vy-pn~rF~SpeeQe~~ir~wl~~r~g~ 386 (604)
+.+|.|+ -+.+-| .+---+.-|+=+..|.+.|-++||+|+|+|+=+-|...+ |+--+. -.++.+.|. .+|+
T Consensus 47 g~~v~iv~~s~~~~-~~~~l~el~~~~~a~r~~ga~~i~~v~PYl~Y~RqDr~~~~ge~is-----~~~~a~ll~-~~g~ 119 (308)
T TIGR01251 47 GKDVFIIQQSTSAP-VNDNLMELLIMIDALKRASAKSITAVIPYYGYARQDKKFKSREPIS-----AKLVANLLE-TAGA 119 (308)
T ss_pred CCeEEEEeCCCCCC-ccHHHHHHHHHHHHHHHcCCCeEEEEEEecccchhccccCCCCCch-----HHHHHHHHH-HcCC
Confidence 5788888 766555 222225555556777778888999999999976665433 222333 367888884 4566
Q ss_pred C
Q 007438 387 K 387 (604)
Q Consensus 387 ~ 387 (604)
.
T Consensus 120 d 120 (308)
T TIGR01251 120 D 120 (308)
T ss_pred C
Confidence 4
No 117
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=50.36 E-value=63 Score=34.62 Aligned_cols=171 Identities=9% Similarity=0.033 Sum_probs=79.5
Q ss_pred ccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCce
Q 007438 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkV 488 (604)
..+.+++.+++||++++.- ..-.-+. ++..+.+. .||++++=- .+.+. . .--++|.+...++|..
T Consensus 83 ~~~~~~~~~~~Pd~vlv~G-D~~~~la-~alaA~~~~IPv~HveaG-----~rs~~--~-----~eE~~r~~i~~la~l~ 148 (365)
T TIGR03568 83 IGFSDAFERLKPDLVVVLG-DRFEMLA-AAIAAALLNIPIAHIHGG-----EVTEG--A-----IDESIRHAITKLSHLH 148 (365)
T ss_pred HHHHHHHHHhCCCEEEEeC-CchHHHH-HHHHHHHhCCcEEEEECC-----ccCCC--C-----chHHHHHHHHHHHhhc
Confidence 4566679999999988876 2211121 33333333 486655422 11111 1 0123344444455555
Q ss_pred eeCchhhhh-ccCCcc--eeE--E---eecC-CCCCCCccchhhhhhccCCCCceE-EEEec-----cccccCHHHHHHH
Q 007438 489 LRLSAATQD-LPKSVI--CNV--H---GVNP-KFLQIGEKVATDREQGQQAFSKGA-YFLGK-----MVWAKGYRELIDL 553 (604)
Q Consensus 489 I~LS~avq~-l~ks~V--~nV--h---GVdp-~fF~pg~r~a~rr~~g~~~~~Kvv-LFVGR-----LvwEKGfD~LLdl 553 (604)
.++|+.-++ +.+.++ .+| + +||. ..+....+.....+.+.+...+.+ +-+-+ ....+.+..+++.
T Consensus 149 f~~t~~~~~~L~~eg~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~ 228 (365)
T TIGR03568 149 FVATEEYRQRVIQMGEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKA 228 (365)
T ss_pred cCCCHHHHHHHHHcCCCCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHH
Confidence 557765555 444332 223 2 5551 111111222233344444333343 33433 3334567777777
Q ss_pred HHHhhccCCCcEEEEE-ecCCCHHHHHHHHHhcC--C-cEEEcCCCCCC
Q 007438 554 LAKHKNDLDGFKLDVF-GNGEDAYEVQSAAKRLD--L-NLNFQKGRDHA 598 (604)
Q Consensus 554 ~~~v~~~~~~~kLdIV-GDGPDreeLk~~a~~Lg--L-~V~FtG~ldha 598 (604)
+.... ..+ ++++ ..+|....+.+.+.++. . ++.++|.++..
T Consensus 229 L~~~~---~~~-~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~ 273 (365)
T TIGR03568 229 LDELN---KNY-IFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQE 273 (365)
T ss_pred HHHhc---cCC-EEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChH
Confidence 65542 234 3343 23355544444443321 2 58888877654
No 118
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=49.14 E-value=82 Score=34.08 Aligned_cols=152 Identities=16% Similarity=0.067 Sum_probs=82.4
Q ss_pred hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCCCCCceeeccCCcccccccCcc
Q 007438 328 VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGFKADFKISFYPGKFSKERRSII 407 (604)
Q Consensus 328 VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~~~~~~i~fYPgry~a~~~SI~ 407 (604)
..++. ..|.+.|| +|.+.+=-+ ++- .-|-+..|++...--..+.+.+.....++.
T Consensus 16 Fk~~I--~eL~~~Gh-eV~it~R~~---~~~-------------------~~LL~~yg~~y~~iG~~g~~~~~Kl~~~~~ 70 (335)
T PF04007_consen 16 FKNII--RELEKRGH-EVLITARDK---DET-------------------EELLDLYGIDYIVIGKHGDSLYGKLLESIE 70 (335)
T ss_pred HHHHH--HHHHhCCC-EEEEEEecc---chH-------------------HHHHHHcCCCeEEEcCCCCCHHHHHHHHHH
Confidence 55666 78999999 888874322 110 112234454432222233444455555666
Q ss_pred CCccccccCCCCCCcEEEEcC-cchhhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCC
Q 007438 408 PAGDTSQFIPSKDADIAILEE-PEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCD 486 (604)
Q Consensus 408 p~gdI~r~L~~f~pDVVHLeE-PehLGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCd 486 (604)
.+-.+.+++++++|||++... |+. .-.++..+ .|.|..+.|-...+. +.+..-+|+
T Consensus 71 R~~~l~~~~~~~~pDv~is~~s~~a-----~~va~~lg-iP~I~f~D~e~a~~~-----------------~~Lt~Pla~ 127 (335)
T PF04007_consen 71 RQYKLLKLIKKFKPDVAISFGSPEA-----ARVAFGLG-IPSIVFNDTEHAIAQ-----------------NRLTLPLAD 127 (335)
T ss_pred HHHHHHHHHHhhCCCEEEecCcHHH-----HHHHHHhC-CCeEEEecCchhhcc-----------------ceeehhcCC
Confidence 667788889999999988543 221 12234445 587877766432221 223333888
Q ss_pred ceeeCchhhhh----ccCC-cceeEEeec----CCCCCCCccchhhhhhccC
Q 007438 487 KVLRLSAATQD----LPKS-VICNVHGVN----PKFLQIGEKVATDREQGQQ 529 (604)
Q Consensus 487 kVI~LS~avq~----l~ks-~V~nVhGVd----p~fF~pg~r~a~rr~~g~~ 529 (604)
+|++|....+. +... .|....|+. ...|.|.... ..++|..
T Consensus 128 ~i~~P~~~~~~~~~~~G~~~~i~~y~G~~E~ayl~~F~Pd~~v--l~~lg~~ 177 (335)
T PF04007_consen 128 VIITPEAIPKEFLKRFGAKNQIRTYNGYKELAYLHPFKPDPEV--LKELGLD 177 (335)
T ss_pred eeECCcccCHHHHHhcCCcCCEEEECCeeeEEeecCCCCChhH--HHHcCCC
Confidence 89888875432 3221 122223555 3457776432 3455544
No 119
>cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+). This enzyme catalyzes the phosphorylation of nicotinamide riboside (NR) to form nicotinamide mononucleotide (NMN). It defines the NR salvage pathway of NAD+ biosynthesis in addition to the pathways through nicotinic acid mononucleotide (NaMN). This enzyme can also phosphorylate the anticancer drug tiazofurin, which is an analog of nicotinamide riboside.
Probab=45.75 E-value=9.2 Score=37.82 Aligned_cols=29 Identities=21% Similarity=0.122 Sum_probs=26.2
Q ss_pred ccccchhhhccccCcccccCcccccCCCC
Q 007438 275 DELDLRIASVLQSTGHHYEGGFWTDFGKD 303 (604)
Q Consensus 275 ~~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 303 (604)
-..|+|+..-++..||-..||||.|+..|
T Consensus 139 ~~~d~~~~Rr~~R~~~~~~~~~w~Dp~~y 167 (187)
T cd02024 139 VPYETCKRRREARTGYVTLEGFWPDPPGY 167 (187)
T ss_pred CCHHHHHHHHHHcCCccccCcccCCCCcc
Confidence 46788999999999999999999999886
No 120
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=45.53 E-value=43 Score=36.77 Aligned_cols=163 Identities=16% Similarity=0.082 Sum_probs=86.6
Q ss_pred ccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCC-cEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCce
Q 007438 410 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDKV 488 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdkV 488 (604)
.++.+.+..++||++|+.+=--.|+--..+...++.+ ||| | |+. +++++ ||.---...+.+||++
T Consensus 72 ~~~~~~~~~~~pd~vIlID~pgFNlrlak~lk~~~~~~~vi------y--YI~----PqvWA--Wr~~R~~~i~~~~D~l 137 (373)
T PF02684_consen 72 RKLVERIKEEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVI------Y--YIS----PQVWA--WRPGRAKKIKKYVDHL 137 (373)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCccHHHHHHHHHhCCCceEE------E--EEC----Cceee--eCccHHHHHHHHHhhe
Confidence 3566778899999999998544444411222222211 344 3 554 33222 2221112224589999
Q ss_pred eeCchhhhhcc-CCcceeEE--eec-CCCCCCCccchhhhhhccCCCCc-eEEEEe-cc-ccccCHHHHHHHHHHhhccC
Q 007438 489 LRLSAATQDLP-KSVICNVH--GVN-PKFLQIGEKVATDREQGQQAFSK-GAYFLG-KM-VWAKGYRELIDLLAKHKNDL 561 (604)
Q Consensus 489 I~LS~avq~l~-ks~V~nVh--GVd-p~fF~pg~r~a~rr~~g~~~~~K-vvLFVG-RL-vwEKGfD~LLdl~~~v~~~~ 561 (604)
+++=+--.++- ++++. ++ |=+ .+...+.......++...+++.+ +++.=| |- .-.+.+..++++.+.+.+..
T Consensus 138 l~ifPFE~~~y~~~g~~-~~~VGHPl~d~~~~~~~~~~~~~~~l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~ 216 (373)
T PF02684_consen 138 LVIFPFEPEFYKKHGVP-VTYVGHPLLDEVKPEPDRAEAREKLLDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQR 216 (373)
T ss_pred eECCcccHHHHhccCCC-eEEECCcchhhhccCCCHHHHHHhcCCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 88877666643 44432 32 322 11112222112222222444454 445555 22 34466678888888888889
Q ss_pred CCcEEEEEecCCCHHH-HHHHHHhcCC
Q 007438 562 DGFKLDVFGNGEDAYE-VQSAAKRLDL 587 (604)
Q Consensus 562 ~~~kLdIVGDGPDree-Lk~~a~~LgL 587 (604)
++.+++|-..-+..++ +++.....+.
T Consensus 217 p~l~fvvp~a~~~~~~~i~~~~~~~~~ 243 (373)
T PF02684_consen 217 PDLQFVVPVAPEVHEELIEEILAEYPP 243 (373)
T ss_pred CCeEEEEecCCHHHHHHHHHHHHhhCC
Confidence 9999888776655555 4555444433
No 121
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=44.67 E-value=20 Score=37.04 Aligned_cols=44 Identities=18% Similarity=0.117 Sum_probs=30.5
Q ss_pred cccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChhhH
Q 007438 411 DTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEY 459 (604)
Q Consensus 411 dI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~eY 459 (604)
...+.+++++||+||........|. +...+ .|+|++.|.+|..|
T Consensus 84 ~~~~~l~~~~pDlVi~d~~~~~~~a----A~~~~-iP~i~i~~q~~~~~ 127 (321)
T TIGR00661 84 REINIIREYNPDLIISDFEYSTVVA----AKLLK-IPVICISNQNYTRY 127 (321)
T ss_pred HHHHHHHhcCCCEEEECCchHHHHH----HHhcC-CCEEEEecchhhcC
Confidence 3456789999999998875555442 34444 59998988776444
No 122
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=44.51 E-value=46 Score=35.33 Aligned_cols=51 Identities=12% Similarity=0.277 Sum_probs=40.1
Q ss_pred CCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCccc
Q 007438 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQEL 359 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~ 359 (604)
.+.+|.|+-+.+-| .+--.+.-|+-+.-|.+.|-.+||+|+|+|+=+-|..
T Consensus 35 ~g~~v~ii~s~~~p-~nd~l~ell~~~~a~r~~~a~~i~~ViPYl~YaRQDr 85 (304)
T PRK03092 35 RGCDAFVLQSHTAP-INKWLMEQLIMIDALKRASAKRITVVLPFYPYARQDK 85 (304)
T ss_pred CCCEEEEEeCCCCC-CcHHHHHHHHHHHHHHHcCCCeEEEEEeccccccccc
Confidence 46789999887766 3334477788888888889889999999999776753
No 123
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B ....
Probab=44.33 E-value=47 Score=30.56 Aligned_cols=51 Identities=22% Similarity=0.413 Sum_probs=33.1
Q ss_pred CCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCccc
Q 007438 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQEL 359 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~ 359 (604)
.+.+|.|+.+.+-| .+-..++.|+=+.-+.+.|-.+||+|+|+++=+-|..
T Consensus 46 ~g~dv~iiqs~~~~-~nd~lmeLll~i~a~r~~~a~~i~~ViPYl~YaRQDr 96 (116)
T PF13793_consen 46 RGKDVFIIQSTSPP-VNDNLMELLLLIDALRRAGAKRITLVIPYLPYARQDR 96 (116)
T ss_dssp TTSEEEEE---SSS-HHHHHHHHHHHHHHHHHTTBSEEEEEESS-TTTTSSS
T ss_pred cCCceEEEEecCCc-hhHHHHHHHHHHHHHHHcCCcEEEEeccchhhhhhcc
Confidence 37889999998864 3333356666556666677679999999999666654
No 124
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=42.87 E-value=59 Score=34.49 Aligned_cols=71 Identities=20% Similarity=0.312 Sum_probs=49.4
Q ss_pred CCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccC-CceeCChhHHHHHHHHHHHHHhCC
Q 007438 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYP-NVTFCSPEEQENYMRNWLEERVGF 386 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vyp-n~rF~SpeeQe~~ir~wl~~r~g~ 386 (604)
.+.+|.|+-+.+-| +---++-|+=+.-|.+.|-.+||+|+|+|+=+-|...+. +--+.. ..+...|+ .|+
T Consensus 48 ~g~~V~ivqs~~~~--n~~l~elll~~~alr~~~a~~i~~ViPY~~YaRqDr~~~~ge~isa-----k~vA~ll~--~~~ 118 (301)
T PRK07199 48 AGRTVVLVCSLDRP--DEKLLPLLFAAEAARELGARRVGLVAPYLAYMRQDIAFHPGEAISQ-----RHFARLLS--GSF 118 (301)
T ss_pred CCCEEEEECCCCCC--cHHHHHHHHHHHHHHHcCCCeEEEEeecccccccccccCCCCCccH-----HHHHHHHH--hhc
Confidence 35789999988777 443466666667777888889999999999777765443 234443 56788885 354
Q ss_pred C
Q 007438 387 K 387 (604)
Q Consensus 387 ~ 387 (604)
.
T Consensus 119 d 119 (301)
T PRK07199 119 D 119 (301)
T ss_pred C
Confidence 4
No 125
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=40.42 E-value=38 Score=36.47 Aligned_cols=50 Identities=16% Similarity=0.355 Sum_probs=38.5
Q ss_pred CceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCccc
Q 007438 309 KRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQEL 359 (604)
Q Consensus 309 ~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~ 359 (604)
+.+|.|+-+.+-| .+---+.-|+-+..|.+.|-++||+|+|+|+=+-|..
T Consensus 56 g~dV~ivqs~~~p-~nd~l~eLll~~~alr~~~a~~i~~ViPYl~YaRQDr 105 (332)
T PRK00553 56 NKDVVIFQSTCSP-VNDSLMELLIAIDALKRGSAKSITAILPYYGYARQDR 105 (332)
T ss_pred CCEEEEEcCCCCC-CchHHHHHHHHHHHHHHcCCCeEEEEeeccccchhhc
Confidence 6789999886655 1222377788888888889889999999999777753
No 126
>PLN02718 Probable galacturonosyltransferase
Probab=39.57 E-value=85 Score=36.88 Aligned_cols=153 Identities=14% Similarity=0.176 Sum_probs=75.8
Q ss_pred hhHHHHHHHHHHHHHhhchhhhhHhcCCCc-hhHHHHHHhhhhhhcc---CCCCCCCCCCCChHHHHH---HHHH-hhcc
Q 007438 157 EPIRTLKMRLREFERKRELSVEEIFGGFKS-SDFVEKVKSSWKAICK---EPEESKDVPPLDPTELLA---HLVR-QSGP 228 (604)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~-~~~~ 228 (604)
+-||.||..|-- -|+-.+ +...++ ..|+..+|..+|.... +.-...++|+- +.+.+. ..+- -..-
T Consensus 165 ~~v~~~~dql~~--ak~y~~----~a~~~~~~~~~~el~~~i~e~~~~l~~~~~d~~lp~~-~~~~~~~m~~~~~~a~~~ 237 (603)
T PLN02718 165 EKVKEIRDKIIQ--AKAYLN----LAPPGSNSQLVKELRLRTKELERAVGDATKDKDLSKS-ALQRMKSMEVTLYKASRV 237 (603)
T ss_pred HHHHHHHHHHHH--HHHHHH----HhccCCcHHHHHHHHHHHHHHHHHHhcccCCCCCCHh-HHHHHHHHHHHHHHHHhc
Confidence 456777776532 222222 344444 7888888888775532 22223334443 222221 1111 1111
Q ss_pred cccccccchhhhHHHHHHHh-------h-hhhhhhhhhhcccCCCccccccCCCccccchhhhccccCcccccCcccccC
Q 007438 229 FLDHLGVKRDLCDKIVESLC-------S-KRKEQLLLRSIAGGECSVLENDNINDELDLRIASVLQSTGHHYEGGFWTDF 300 (604)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~ 300 (604)
.-| -+.+..|+..+|. + |....++++..+.+- ++.---|-||.+.---+.... +..| +
T Consensus 238 ~~d----~~~~~~klr~~~~~~e~~~~~~~~q~~~~~~laa~~~------PK~lhCL~~rLt~ey~~~~~~-~~~~---~ 303 (603)
T PLN02718 238 FPN----CPAIATKLRAMTYNTEEQVRAQKNQAAYLMQLAARTT------PKGLHCLSMRLTAEYFALDPE-KRQL---P 303 (603)
T ss_pred ccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------CCCccccchhhHHHHhhCChh-hccC---C
Confidence 111 1234445444443 2 333444444333221 222245666665432111111 1112 4
Q ss_pred CCCCCCCCC-ceEEEEecCCCCcccchhhhHHH
Q 007438 301 GKDDLSDKK-RNVAIVTTASLPWMTGTAVNPLF 332 (604)
Q Consensus 301 ~~~~~~~~~-r~IaIfTTAsLPWmTGtAVnpL~ 332 (604)
..-.+.||. +||++|+|-++ -+||+||.++
T Consensus 304 ~~~~l~d~~~~Hia~~sDNvl--aasVvInSil 334 (603)
T PLN02718 304 NQQRYNDPDLYHYVVFSDNVL--ACSVVVNSTI 334 (603)
T ss_pred ChhhccCCcceeEEEEcCCce--eEEEEhhhhh
Confidence 445788887 99999999985 6999999998
No 127
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=39.54 E-value=43 Score=35.30 Aligned_cols=57 Identities=23% Similarity=0.226 Sum_probs=37.2
Q ss_pred CcEEEEcCc--chhhhhcchhhhhcCCC-cEEEEEEcChh-hHHhhhccchhHH-HHHHHHHHHHHH
Q 007438 421 ADIAILEEP--EHLNWYHHGKRWTDKFN-HVVGVVHTNYL-EYIKREKNGALQA-FFVKHINNWVTR 482 (604)
Q Consensus 421 pDVVHLeEP--ehLGwy~~Garwt~Kf~-PVVgiyHTNY~-eYary~~~G~l~a-plvR~~~r~~~r 482 (604)
||++++.+| ++...- =+.+++ |||+++-||-+ +++.|.==|.-.+ +.++.++..+++
T Consensus 157 Pd~l~ViDp~~e~iAv~-----EA~klgIPVvAlvDTn~dpd~VD~~IP~Ndda~rsi~Li~~~lA~ 218 (252)
T COG0052 157 PDVLFVIDPRKEKIAVK-----EANKLGIPVVALVDTNCDPDGVDYVIPGNDDAIRSIALIYWLLAR 218 (252)
T ss_pred CCEEEEeCCcHhHHHHH-----HHHHcCCCEEEEecCCCCCccCceeecCCChHHHHHHHHHHHHHH
Confidence 999999999 444333 455555 99999999998 8888752222222 244555444444
No 128
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=36.91 E-value=61 Score=34.48 Aligned_cols=73 Identities=18% Similarity=0.302 Sum_probs=45.9
Q ss_pred CCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccC-CceeCChhHHHHHHHHHHHHHhCC
Q 007438 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYP-NVTFCSPEEQENYMRNWLEERVGF 386 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vyp-n~rF~SpeeQe~~ir~wl~~r~g~ 386 (604)
.+.+|.|+.+.+.|- .--.+.-|+=+..|.+.|-.+||+++|+||=+-|...+. +--+. -.++.+.|. .+|+
T Consensus 46 ~g~~V~ii~s~~~~~-nd~l~eLll~~~alr~~ga~~i~lViPYl~YsRQDr~~~~ge~is-----ak~~a~lL~-~~g~ 118 (309)
T PRK01259 46 RGKDVFIIQSTCAPT-NDNLMELLIMIDALKRASAGRITAVIPYFGYARQDRKARSRVPIT-----AKLVANLLE-TAGA 118 (309)
T ss_pred CCCEEEEECCCCCCC-cHHHHHHHHHHHHHHHcCCceEEEEeeccccchhhhhhccCCCch-----HHHHHHHHh-hcCC
Confidence 357899998765552 222255555556677778779999999999777764332 22222 256777774 4565
Q ss_pred C
Q 007438 387 K 387 (604)
Q Consensus 387 ~ 387 (604)
.
T Consensus 119 d 119 (309)
T PRK01259 119 D 119 (309)
T ss_pred C
Confidence 4
No 129
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=35.43 E-value=80 Score=38.03 Aligned_cols=44 Identities=14% Similarity=-0.004 Sum_probs=34.8
Q ss_pred CCCceEEEEeccccccCHHHHHHHHHHhhc---c-CCCcEEEEEecCC
Q 007438 530 AFSKGAYFLGKMVWAKGYRELIDLLAKHKN---D-LDGFKLDVFGNGE 573 (604)
Q Consensus 530 ~~~KvvLFVGRLvwEKGfD~LLdl~~~v~~---~-~~~~kLdIVGDGP 573 (604)
++..++.|++|++-+|+.+.|+..+.++.+ + ...+++++.|.|.
T Consensus 476 pd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAh 523 (778)
T cd04299 476 PNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAH 523 (778)
T ss_pred CCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecC
Confidence 344589999999999999999988766643 2 1348999999997
No 130
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=34.81 E-value=30 Score=32.71 Aligned_cols=71 Identities=17% Similarity=0.212 Sum_probs=44.8
Q ss_pred ccccccCCCCCCcEEEEcCcchhhh-hcchhhhhcCC-CcEEEEEEcChhhHHhhhccchhHHHHHHHHHHHHHHhhCCc
Q 007438 410 GDTSQFIPSKDADIAILEEPEHLNW-YHHGKRWTDKF-NHVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCDK 487 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPehLGw-y~~Garwt~Kf-~PVVgiyHTNY~eYary~~~G~l~aplvR~~~r~~~r~yCdk 487 (604)
.++.++|.+++||+||..=|+-.+. .+..+. .... ++.+.++-|+|.. +|. .|+. ..+|.
T Consensus 79 ~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~-~~~~~~~p~~tvvTD~~~-~H~---------------~W~~-~~~D~ 140 (169)
T PF06925_consen 79 RRLIRLLREFQPDLIISTHPFPAQVPLSRLKR-RGRLPNIPVVTVVTDFDT-VHP---------------FWIH-PGVDR 140 (169)
T ss_pred HHHHHHHhhcCCCEEEECCcchhhhHHHHHHH-hhcccCCcEEEEEcCCCC-CCc---------------Ceec-CCCCE
Confidence 4688889999999999999985544 322222 2222 3335577798721 131 2223 37888
Q ss_pred eeeCchhhhhc
Q 007438 488 VLRLSAATQDL 498 (604)
Q Consensus 488 VI~LS~avq~l 498 (604)
-++.|+.+++.
T Consensus 141 y~Vase~~~~~ 151 (169)
T PF06925_consen 141 YFVASEEVKEE 151 (169)
T ss_pred EEECCHHHHHH
Confidence 88899877763
No 131
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=33.76 E-value=5.3e+02 Score=29.26 Aligned_cols=169 Identities=14% Similarity=0.192 Sum_probs=93.2
Q ss_pred CCCCcEEEEcCcch-----hhhhcchhhhhcCCCcEEEEEEcChhhHHhhhccch--hHHHHHHHHHHHHHHhhCCceee
Q 007438 418 SKDADIAILEEPEH-----LNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGA--LQAFFVKHINNWVTRAYCDKVLR 490 (604)
Q Consensus 418 ~f~pDVVHLeEPeh-----LGwy~~Garwt~Kf~PVVgiyHTNY~eYary~~~G~--l~aplvR~~~r~~~r~yCdkVI~ 490 (604)
-..+|++.+++|-. .+|+ ...|+.- +-+|-|-...|- ..-....|. ..-.+++++-+.|-+ .+|.-++
T Consensus 101 ~~~~~~ilvQNPP~iPtliv~~~--~~~l~~~-KfiIDWHNy~Ys-l~l~~~~g~~h~lV~l~~~~E~~fgk-~a~~nLc 175 (444)
T KOG2941|consen 101 LRPPDIILVQNPPSIPTLIVCVL--YSILTGA-KFIIDWHNYGYS-LQLKLKLGFQHPLVRLVRWLEKYFGK-LADYNLC 175 (444)
T ss_pred ccCCcEEEEeCCCCCchHHHHHH--HHHHhcc-eEEEEehhhHHH-HHHHhhcCCCCchHHHHHHHHHHhhc-ccccchh
Confidence 46789999999843 3444 1122222 333433322232 122233443 344467777666666 8888888
Q ss_pred Cchhhhh-ccC-CcceeE-Eeec--CC----------CCCC-Cc-----------cchhhhhhccC---------CCCce
Q 007438 491 LSAATQD-LPK-SVICNV-HGVN--PK----------FLQI-GE-----------KVATDREQGQQ---------AFSKG 534 (604)
Q Consensus 491 LS~avq~-l~k-s~V~nV-hGVd--p~----------fF~p-g~-----------r~a~rr~~g~~---------~~~Kv 534 (604)
.|.+.|+ +.. =+|..+ +--| |+ .|.+ +. ..+..++..++ ..+.-
T Consensus 176 VT~AMr~dL~qnWgi~ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~p 255 (444)
T KOG2941|consen 176 VTKAMREDLIQNWGINRAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPERP 255 (444)
T ss_pred hHHHHHHHHHHhcCCceeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCCC
Confidence 8998885 222 121111 1111 11 1111 10 11111110010 11334
Q ss_pred EEEEeccccc--cCHHHHHHHHHHhh-------ccCCCcEEEEEecCCCHHHHHHHHHhcCC-cEEE
Q 007438 535 AYFLGKMVWA--KGYRELIDLLAKHK-------NDLDGFKLDVFGNGEDAYEVQSAAKRLDL-NLNF 591 (604)
Q Consensus 535 vLFVGRLvwE--KGfD~LLdl~~~v~-------~~~~~~kLdIVGDGPDreeLk~~a~~LgL-~V~F 591 (604)
++.|.--.|- .+|..|++++..+. .+.|..-+.|-|-||.++.-.+.++++++ .|.|
T Consensus 256 allvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlkE~Y~~~I~~~~~~~v~~ 322 (444)
T KOG2941|consen 256 ALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLKEKYSQEIHEKNLQHVQV 322 (444)
T ss_pred eEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchhHHHHHHHHHhcccceee
Confidence 6777777764 67999999987442 24566788999999999999999999998 5544
No 132
>PF08824 Serine_rich: Serine rich protein interaction domain; InterPro: IPR014928 This is a serine rich protein that is found in the docking protein p130(cas) (Crk-associated substrate). The protein folds into a four helix bundle which is associated with protein-protein interactions []. ; PDB: 2L81_A 1Z23_A.
Probab=33.71 E-value=31 Score=33.92 Aligned_cols=84 Identities=21% Similarity=0.452 Sum_probs=52.9
Q ss_pred cchhhhhhhhHHhhcchhhhHHHHHHhhhhhhhhhhhhhHHHHHHHhhcCC-CCCchhhhHHhhhchhhhhhhhhcCchh
Q 007438 12 KAFSFISRSWREVRDSADADIQLMKNRANSFKNLATSFDRELENFLNSANR-SSAPAEIDFVKKLQPKISEFRRVYSAPE 90 (604)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (604)
+=++|.|.+||- +++-++.+..+|.-++.++. |+ +|+-+|-..|.. ++-..+-.+-.+|++-+..++..|..=-
T Consensus 23 ~L~~fvs~~WR~-~~~le~~i~~Ir~a~~~v~~---sl-~~fl~FArga~~NA~~~~D~~L~~kL~~qLq~l~ds~qiL~ 97 (159)
T PF08824_consen 23 NLMSFVSSNWRS-PESLERHINEIRAAVDRVRA---SL-REFLDFARGALANASNLSDRNLQAKLRRQLQPLEDSYQILL 97 (159)
T ss_dssp HHHHHHCSSTT--CCCHHTTCCHHHHHHHHHHH---HH-HHHHHHHHHHHCCHTTTTS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCC-hHHHhhhHHHHHHHHHHHHH---HH-HHHHHHHhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 457899999998 78888888888887765543 33 566666444333 3445666666677777777766665543
Q ss_pred hhHHHhh--hcC
Q 007438 91 ISKRVLE--KWG 100 (604)
Q Consensus 91 ~~~~~~~--~~~ 100 (604)
=.+..|+ +|.
T Consensus 98 ~~~q~Ld~~~Ws 109 (159)
T PF08824_consen 98 QTSQALDSCNWS 109 (159)
T ss_dssp HHHHHHHHTTTS
T ss_pred HHHHHHHcCCCC
Confidence 3344554 553
No 133
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=33.00 E-value=89 Score=33.21 Aligned_cols=51 Identities=12% Similarity=0.221 Sum_probs=38.2
Q ss_pred CCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCccc
Q 007438 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQEL 359 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~ 359 (604)
.+.+|.|+-+.+-|- +---++-|+=+..|.+.|-.+||+|+|+|+=+-|..
T Consensus 37 ~g~~V~iv~s~~~p~-nd~l~eLl~~~~a~r~~~a~~i~~ViPYl~YsRQDr 87 (302)
T PLN02369 37 RGCDVFLVQPTCPPA-NENLMELLIMIDACRRASAKRITAVIPYFGYARADR 87 (302)
T ss_pred CCCeEEEEecCCCCc-chHHHHHHHHHHHHHHcCCCeEEEEeeccccccccc
Confidence 357899999987662 222366666677788888889999999999777763
No 134
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=31.89 E-value=48 Score=35.24 Aligned_cols=24 Identities=17% Similarity=0.324 Sum_probs=18.7
Q ss_pred CCcEEEEEecCCCHHHHHHHHHhcCCc
Q 007438 562 DGFKLDVFGNGEDAYEVQSAAKRLDLN 588 (604)
Q Consensus 562 ~~~kLdIVGDGPDreeLk~~a~~LgL~ 588 (604)
|++.++++|||+|+++ +|+.++.+
T Consensus 229 p~~~f~~IGDG~eEe~---aAk~l~wP 252 (274)
T TIGR01658 229 PKVRFCAIGDGWEECT---AAQAMNWP 252 (274)
T ss_pred CCceEEEeCCChhHHH---HHHhcCCC
Confidence 5799999999999974 45566663
No 135
>PF09861 DUF2088: Domain of unknown function (DUF2088); InterPro: IPR018657 This domain, found in various hypothetical proteins, has no known function. ; PDB: 2YJG_B.
Probab=29.85 E-value=1.5e+02 Score=29.98 Aligned_cols=66 Identities=21% Similarity=0.261 Sum_probs=40.4
Q ss_pred CCCceEEEEe-cCCCCcccchhhhHHHHHHHHhhcCC--ceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHH
Q 007438 307 DKKRNVAIVT-TASLPWMTGTAVNPLFRAAYLAKTEQ--QNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEER 383 (604)
Q Consensus 307 ~~~r~IaIfT-TAsLPWmTGtAVnpL~RAayLak~G~--~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r 383 (604)
.++++|+|+. |..-|-=++..+.+|+ .+|...|. .+|++++ -+ +.+|-.|+||++.-+-.++-++
T Consensus 52 ~~~~~V~Ivv~D~TRp~p~~~il~~ll--~~L~~~Gv~~~~i~ii~-A~---------G~Hr~~t~ee~~~~lG~~i~~~ 119 (204)
T PF09861_consen 52 KPGKRVAIVVDDITRPTPSDLILPALL--EELEEAGVKDEDITIII-AL---------GTHRPMTEEELKQILGEEIYER 119 (204)
T ss_dssp TT-SEEEEEEE-TTS---HHHHHHHHH--HHHHT-T-TT-EEEEEE-E----------TTS----HHHHHHHH-HHHHHH
T ss_pred CCCCeEEEEeCCCCCCCCHHHHHHHHH--HHHHhcCCCccCEEEEE-eC---------CCCCCCCHHHHHHHhhhhhcCc
Confidence 3578999876 8888855566699999 99999885 5888883 22 2257788999998888887776
Q ss_pred h
Q 007438 384 V 384 (604)
Q Consensus 384 ~ 384 (604)
+
T Consensus 120 ~ 120 (204)
T PF09861_consen 120 V 120 (204)
T ss_dssp S
T ss_pred e
Confidence 4
No 136
>PRK05590 hypothetical protein; Provisional
Probab=29.24 E-value=39 Score=33.67 Aligned_cols=32 Identities=28% Similarity=0.232 Sum_probs=28.3
Q ss_pred EEEEecCCCHHHHHHHHHhcCC-cEEEcCCCCCCcccCc
Q 007438 566 LDVFGNGEDAYEVQSAAKRLDL-NLNFQKGRDHADDSLH 603 (604)
Q Consensus 566 LdIVGDGPDreeLk~~a~~LgL-~V~FtG~ldhad~~~~ 603 (604)
=+|-|. ++.+|.+.+. .+.|+|.+||+++||-
T Consensus 44 ~~~~gt------v~ela~k~~~~~~~~~GfldGin~sl~ 76 (166)
T PRK05590 44 EVVEGT------VKELAEKFGTSVVFFMGFLDGINDSLK 76 (166)
T ss_pred ceeeee------HHHHHHHhCCChhhhhhhhhcchhhhC
Confidence 457888 9999999999 7799999999999974
No 137
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=29.21 E-value=1e+02 Score=33.06 Aligned_cols=50 Identities=16% Similarity=0.332 Sum_probs=37.7
Q ss_pred CceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCccc
Q 007438 309 KRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQEL 359 (604)
Q Consensus 309 ~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~ 359 (604)
+.+|.|+-+.+-| ++---+..|+=+.-|.+.|-.+||+|+|+|+=+-|..
T Consensus 52 g~dV~iv~s~~~~-~nd~lmelll~~~alr~~~a~~i~~V~PYl~YaRQDr 101 (320)
T PRK02269 52 GHHVFILQSTSSP-VNDNLMEILIMVDALKRASAESINVVMPYYGYARQDR 101 (320)
T ss_pred CCEEEEEecCCCC-ccchHHHHHHHHHHHHHhCCCeEEEEEeccccchhhc
Confidence 5689999876656 2333467777777888888889999999999766753
No 138
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=28.81 E-value=84 Score=33.75 Aligned_cols=51 Identities=18% Similarity=0.320 Sum_probs=36.3
Q ss_pred CCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCccc
Q 007438 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQEL 359 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~ 359 (604)
.+.+|.|+-+.+.|- +---+.-|+=+.-|.+.|-++||+|+|+|+=+-|..
T Consensus 52 ~g~~V~iiqs~~~p~-nd~lmeLl~~~~alr~~~a~~i~~ViPYl~YaRQDr 102 (319)
T PRK04923 52 RRQEVFVIQPTCAPS-AENLMELLVLIDALKRASAASVTAVIPYFGYSRQDR 102 (319)
T ss_pred CCCeEEEEecCCCCC-chHHHHHHHHHHHHHHcCCcEEEEEeeccccccccc
Confidence 368899998877762 112245555456666778789999999999777764
No 139
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=28.79 E-value=1.5e+02 Score=32.28 Aligned_cols=170 Identities=19% Similarity=0.279 Sum_probs=92.2
Q ss_pred CCccccchhhhcccc-CcccccCcccccCCCCCCCCC--CceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEe
Q 007438 273 INDELDLRIASVLQS-TGHHYEGGFWTDFGKDDLSDK--KRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLV 349 (604)
Q Consensus 273 ~~~~l~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~v 349 (604)
.+.+|.-+||.-|-. -|-...+.|=+.-....+.++ +.+|.|+.+.+-|- +---++-|+-+.-|.+.|-++||+++
T Consensus 12 s~~~La~~ia~~l~~~l~~~~~~rF~DGE~~V~i~EsVrg~dVfI~qs~~~pv-nd~lmELLi~idA~k~asA~~It~Vi 90 (314)
T COG0462 12 SNPELAEKIAKRLGIPLGKVEVKRFPDGEIYVRIEESVRGKDVFIIQSTSPPV-NDNLMELLIMIDALKRASAKRITAVI 90 (314)
T ss_pred CCHHHHHHHHHHhCCCcccceeEEcCCCcEEEEecccccCCeEEEEeCCCCCc-CHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 344555555543321 122223333333333334444 45899999887652 22237788888999999988999999
Q ss_pred ecCCCCCccccc-CC--ceeCChhHHHHHHHHHHHHHhCCCC----CceeeccCCcccccccCccCCccccccCCCC-CC
Q 007438 350 PWLCKSDQELVY-PN--VTFCSPEEQENYMRNWLEERVGFKA----DFKISFYPGKFSKERRSIIPAGDTSQFIPSK-DA 421 (604)
Q Consensus 350 PWl~~~dqe~vy-pn--~rF~SpeeQe~~ir~wl~~r~g~~~----~~~i~fYPgry~a~~~SI~p~gdI~r~L~~f-~p 421 (604)
|.|+=+-|...+ |+ ++- .-|.+-| +++|... |+-..--.|+|.-.---+++..-+.+++.+. ..
T Consensus 91 PY~gYARQDk~~~~repIsa-------klvA~lL-~~aG~drv~TvDlH~~qiqgfFdipvdnl~a~p~l~~~~~~~~~~ 162 (314)
T COG0462 91 PYFGYARQDKAFKPREPISA-------KLVANLL-ETAGADRVLTVDLHAPQIQGFFDIPVDNLYAAPLLAEYIREKYDL 162 (314)
T ss_pred ecchhhccCcccCCCCCEeH-------HHHHHHH-HHcCCCeEEEEcCCchhhcccCCCccccccchHHHHHHHHHhcCC
Confidence 999965554332 22 232 2244444 5567653 2222222344433222335666666666665 33
Q ss_pred cEEEEcCcchhhhhcchhhhhcCCC-cEEEEEE
Q 007438 422 DIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVH 453 (604)
Q Consensus 422 DVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyH 453 (604)
|=.++++|.+=|.-. ...++..++ + ++.+|
T Consensus 163 ~d~vVVSPD~Ggv~R-Ar~~A~~L~~~-~a~i~ 193 (314)
T COG0462 163 DDPVVVSPDKGGVKR-ARALADRLGAP-LAIID 193 (314)
T ss_pred CCcEEECCCccHHHH-HHHHHHHhCCC-EEEEE
Confidence 227888888766653 344555555 5 44443
No 140
>PLN02297 ribose-phosphate pyrophosphokinase
Probab=28.31 E-value=1.1e+02 Score=33.21 Aligned_cols=49 Identities=22% Similarity=0.266 Sum_probs=38.1
Q ss_pred CCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCccc
Q 007438 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQEL 359 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~ 359 (604)
.+.+|.|+-+.+-| . --+.-|+-+.-|.+.|-++||+|+|+|+-+-|..
T Consensus 65 rg~~V~ivqs~~~p--d-~lmELLl~~dAlr~~ga~~i~~ViPY~~YaRQDr 113 (326)
T PLN02297 65 RGQHVAFLASFSSP--A-VIFEQLSVIYALPKLFVASFTLVLPFFPTGTSER 113 (326)
T ss_pred CCCeEEEECCCCCC--h-HHHHHHHHHHHHHHcCCCEEEEEeeCChhhcCCC
Confidence 46889999988877 1 1367777777788888889999999999766653
No 141
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=27.65 E-value=86 Score=35.46 Aligned_cols=50 Identities=14% Similarity=0.351 Sum_probs=37.7
Q ss_pred CCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcc
Q 007438 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQE 358 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe 358 (604)
.+..|.|+-+.+-| .+--.++-|+=+.-|.+.|-.+||+|+|+|+=+-|.
T Consensus 165 rG~dV~IVqS~~~p-vNd~LmELLllidAlr~agAkrItlViPYl~YaRQD 214 (439)
T PTZ00145 165 RGKDVYIIQPTCPP-VNENLIELLLMISTCRRASAKKITAVIPYYGYARQD 214 (439)
T ss_pred CCCeEEEEecCCCC-CcHHHHHHHHHHHHHHHhccCeEEEEeecccchhee
Confidence 35789999987766 233336666666777778888999999999977775
No 142
>PF00336 DNA_pol_viral_C: DNA polymerase (viral) C-terminal domain; InterPro: IPR001462 This domain is at the C terminus of hepatitis B-type viruses P proteins and represents a functional domain that controls the RNase H activities of the protein. The domain is always associated with IPR000201 from INTERPRO and .; GO: 0004523 ribonuclease H activity
Probab=27.02 E-value=91 Score=32.48 Aligned_cols=82 Identities=21% Similarity=0.372 Sum_probs=53.9
Q ss_pred CCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCC-CCCcccccCC-ceeCChhHHHHHHHHHHHHHhCCCCCceeecc
Q 007438 318 ASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLC-KSDQELVYPN-VTFCSPEEQENYMRNWLEERVGFKADFKISFY 395 (604)
Q Consensus 318 AsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~-~~dqe~vypn-~rF~SpeeQe~~ir~wl~~r~g~~~~~~i~fY 395 (604)
+++||.-|.+-|-++ +|. .+++ ||--. ++|- |. .++.- +.+-+...|-
T Consensus 158 ts~PW~lac~A~wiL-------rgt-s~~y-VPS~~NPAD~----PsR~~~~~-----------------~~pl~rl~~~ 207 (245)
T PF00336_consen 158 TSFPWLLACAANWIL-------RGT-SFYY-VPSKYNPADD----PSRGKLGL-----------------LRPLLRLPFR 207 (245)
T ss_pred ccCcHHHHHHHHHhh-------cCc-eEEE-eccccCcCCC----CCCCcccc-----------------cccccccccc
Confidence 479999999999999 344 4444 46544 3444 33 33332 1234555566
Q ss_pred CCcccccccCccCCccccccCCCCCCcEEEEcCcchhhhh
Q 007438 396 PGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWY 435 (604)
Q Consensus 396 Pgry~a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy 435 (604)
| ...+-|.+.+..- ++...||=+|.++|-|-+|-
T Consensus 208 p---~t~r~sl~a~sp~---v~~~~p~rv~~aspl~~~~~ 241 (245)
T PF00336_consen 208 P---TTGRTSLYAVSPS---VPSHLPDRVHFASPLQVCEA 241 (245)
T ss_pred C---CCCceeeeecCCC---CCCCCCcceeccCccccccC
Confidence 6 6666666666555 77788999999999998654
No 143
>cd00221 Vsr Very Short Patch Repair (Vsr) Endonuclease. Endonucleases in DNA repair that recognize damaged DNA and cleave the phosphodiester backbone. Vsr endonucleases have a common endonuclease topology that has been tailored for recognition of TG mismatches.
Probab=26.60 E-value=1.3e+02 Score=27.93 Aligned_cols=72 Identities=18% Similarity=0.034 Sum_probs=47.2
Q ss_pred CccccchhhhccccCcccccCcccccCCCCCCCCCCceEEEEecCCCCcccc--------------------hhhhHHHH
Q 007438 274 NDELDLRIASVLQSTGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTG--------------------TAVNPLFR 333 (604)
Q Consensus 274 ~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~IaIfTTAsLPWmTG--------------------tAVnpL~R 333 (604)
..|..|| ..|...||.+....-.-+...++.-++.+|||+.|-..-..+. ....=-.|
T Consensus 19 ~~E~~lr--~~L~~~Gl~~r~~~~~~~~~~D~~~~~~klaIe~DG~~wH~~~~~~~~~~~~~~~~w~~k~~~~~~rD~~r 96 (115)
T cd00221 19 KPERAVR--SALWELGYRFRKQDKDLPGKPDIVVPGYRLAIFVDGCFWHGHPCHKRKPPPKNTEFWLEKIERNVERDRRV 96 (115)
T ss_pred HHHHHHH--HHHHHCCCEEEeCCCCCCcccCEEecCCCEEEEEcCccccCCccccccCCCccHHHHHHHHHHHHHHHHHH
Confidence 3455555 5688889987654333355666777889999999987644443 22334456
Q ss_pred HHHHhhcCCceEEEE
Q 007438 334 AAYLAKTEQQNVTLL 348 (604)
Q Consensus 334 AayLak~G~~~VtL~ 348 (604)
.++|.+.|- .|.-|
T Consensus 97 ~~~L~~~GW-~ViRv 110 (115)
T cd00221 97 QAALERLGW-RVLRV 110 (115)
T ss_pred HHHHHHCcC-EEEEE
Confidence 788999887 55443
No 144
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=26.39 E-value=2.1e+02 Score=30.06 Aligned_cols=67 Identities=19% Similarity=0.356 Sum_probs=41.7
Q ss_pred CceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCccccc-CCceeCChhHHHHHHHHHHHH
Q 007438 309 KRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVY-PNVTFCSPEEQENYMRNWLEE 382 (604)
Q Consensus 309 ~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vy-pn~rF~SpeeQe~~ir~wl~~ 382 (604)
+.+|.|+.+.. | .+---+.-|+=+..|.+.|-.+||+++|+||=+-|...+ |+-.+.. .++..+|+.
T Consensus 46 g~~v~i~~~~~-~-~~d~l~ell~~~~alr~~ga~~i~~v~PY~~YaRqDr~~~~ge~isa-----k~~a~ll~~ 113 (285)
T PRK00934 46 GEDVVIISTTY-P-QDENLVELLLLIDALRDEGAKSITLVIPYLGYARQDKRFKPGEPISA-----RAIAKIISA 113 (285)
T ss_pred CCEEEEEeCCC-C-CcHHHHHHHHHHHHHHHcCCCeEEEEecCCcccccccccCCCCCccH-----HHHHHHHHH
Confidence 57888887743 2 222235555556777788888999999999976665432 2222322 566666643
No 145
>cd06167 LabA_like LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.
Probab=25.42 E-value=1.4e+02 Score=27.12 Aligned_cols=58 Identities=14% Similarity=0.007 Sum_probs=38.4
Q ss_pred ccccCHHHHH--HHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCCcEEEcCCCCCCcc
Q 007438 542 VWAKGYRELI--DLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDHADD 600 (604)
Q Consensus 542 vwEKGfD~LL--dl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL~V~FtG~ldhad~ 600 (604)
.-+||.|.-| |++........+.-+.+-||| |...+-+.++++|..|...|...+...
T Consensus 78 ~~~~~~D~~l~~d~~~~~~~~~~d~ivLvSgD~-Df~~~i~~lr~~G~~V~v~~~~~~~s~ 137 (149)
T cd06167 78 SGKKGVDVALAIDALELAYKRRIDTIVLVSGDS-DFVPLVERLRELGKRVIVVGFEAKTSR 137 (149)
T ss_pred CcccCccHHHHHHHHHHhhhcCCCEEEEEECCc-cHHHHHHHHHHcCCEEEEEccCccChH
Confidence 5678887765 555555554456677788888 455555556667998888887755443
No 146
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=24.21 E-value=1.5e+02 Score=32.28 Aligned_cols=38 Identities=24% Similarity=0.146 Sum_probs=32.6
Q ss_pred ceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEE
Q 007438 310 RNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLL 348 (604)
Q Consensus 310 r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~ 348 (604)
|+|+|++|++.--=-|=++-.|.=|.+|++.|. .++.+
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~-~~~fl 38 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRGF-ACLFL 38 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcCc-eEEEe
Confidence 899999999988888888888888999999885 55555
No 147
>cd07365 MhpB_like Subunit B of the Class III Extradiol ring-cleavage dioxygenase, 2,3-dihydroxyphenylpropionate 1,2-dioxygenase (MhpB), which catalyzes the oxidization and subsequent ring-opening of 2,3-dihydroxyphenylpropionate. 2,3-dihydroxyphenylpropionate 1,2-dioxygenase (MhpB) catalyzes the oxidization and subsequent ring-opening of 2,3-dihydroxyphenylpropionate, yielding the product 2-hydroxy-6-oxo-nona-2,4-diene 1,9-dicarboxylate. It is an essential enzyme in the beta-phenylpropionic degradation pathway, in which beta-phenylpropionic is first hydrolyzed to produce 2,3-dihydroxyphenylpropionate. The enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like class III enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the ca
Probab=23.59 E-value=69 Score=34.28 Aligned_cols=26 Identities=23% Similarity=0.560 Sum_probs=21.7
Q ss_pred ccccccCCCCCCcEEEEcCcchhhhh
Q 007438 410 GDTSQFIPSKDADIAILEEPEHLNWY 435 (604)
Q Consensus 410 gdI~r~L~~f~pDVVHLeEPehLGwy 435 (604)
..+.+.|++++||++++.+|.|.+.|
T Consensus 32 ~~l~~~l~~~~PD~iVIigphH~~~f 57 (310)
T cd07365 32 AAARAFVAAFDPELVVLFAPDHYNGF 57 (310)
T ss_pred HHHHHHHHHcCCCEEEEEcCCccccc
Confidence 34666689999999999999999853
No 148
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=23.48 E-value=88 Score=34.39 Aligned_cols=36 Identities=19% Similarity=0.384 Sum_probs=28.6
Q ss_pred cCcccccCCCCCCCCCCceEEEEecCCCCcccchhhhHHHH
Q 007438 293 EGGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFR 333 (604)
Q Consensus 293 ~~~~~~~~~~~~~~~~~r~IaIfTTAsLPWmTGtAVnpL~R 333 (604)
+.|+.+...|..+..--++|||+|.. ||.|+.=+++
T Consensus 119 ~eGlfd~~~k~~lP~~p~~I~viTs~-----~gAa~~D~~~ 154 (438)
T PRK00286 119 AEGLFDPERKKPLPFFPKRIGVITSP-----TGAAIRDILT 154 (438)
T ss_pred HCCCCChhhcCCCCCCCCEEEEEeCC-----ccHHHHHHHH
Confidence 45788877788886667999999975 8999777773
No 149
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=23.45 E-value=1.4e+02 Score=32.14 Aligned_cols=50 Identities=14% Similarity=0.273 Sum_probs=35.9
Q ss_pred CceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCccc
Q 007438 309 KRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQEL 359 (604)
Q Consensus 309 ~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~ 359 (604)
+..|.|+-+.+.|- +---+.-|+=+.-|.+.|-.+|++|+|+|+=+-|..
T Consensus 56 g~dV~ii~s~~~~~-nd~l~eLll~~~alr~~~a~~i~lViPYl~YaRQDr 105 (323)
T PRK02458 56 GDDIYIIQSTSFPV-NDHLWELLIMIDACKRASANTVNVVLPYFGYARQDR 105 (323)
T ss_pred CCeEEEEecCCCCC-chHHHHHHHHHHHHHHcCCceEEEEEeccccchhhc
Confidence 56788888776662 223355565566677788889999999999766654
No 150
>PF03852 Vsr: DNA mismatch endonuclease Vsr; InterPro: IPR004603 This entry represents VSR (very short patch repair) endonucleases, which occur in a variety of bacteria. VSR recognises a TG mismatched base pair, generated after spontaneous deamination of methylated cytosines, and cleaves the phosphate backbone on the 5' side of the thymine []. GT mismatches can lead to C-to-T transition mutations if not repaired. VSR repairs the mismatches in favour of the G-containing strand. In Escherichia coli, this endonuclease nicks double-stranded DNA within the sequence CT(AT)GN or NT(AT)GG next to the thymidine residue, which is mismatched to 2'-deoxyguanosine []. The incision is mismatch-dependent and strand specific. The structure of VSR is similar to the core structure of restriction endonucleases, which have a 3-layer alpha/beta/alpha topology []. ; GO: 0004519 endonuclease activity, 0006298 mismatch repair; PDB: 1ODG_A 1VSR_A 1CW0_A.
Probab=23.41 E-value=24 Score=30.95 Aligned_cols=49 Identities=22% Similarity=0.243 Sum_probs=32.4
Q ss_pred cccCCCccccchhhhccccCcccccCcccccCCCCCCCCCCceEEEEecCC
Q 007438 269 ENDNINDELDLRIASVLQSTGHHYEGGFWTDFGKDDLSDKKRNVAIVTTAS 319 (604)
Q Consensus 269 ~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~IaIfTTAs 319 (604)
.+.+..+|+ .+.+.|-..||+|.-..-+=+.+.++.-++.+||||-|-.
T Consensus 17 r~k~TkpE~--~lr~~L~~~G~RyR~~~~~lpG~PDiv~~~~k~aIFVdGC 65 (75)
T PF03852_consen 17 RSKDTKPEL--ALRRALHALGLRYRLNRKDLPGKPDIVFPKYKIAIFVDGC 65 (75)
T ss_dssp -SSS-HHHH--HHHHHHHHTT--EEES-TTSTT--SEEEGGGTEEEEEE-T
T ss_pred cCCCChHHH--HHHHHHHhcCCEEEEccCcCCCCCCEEECCCCEEEEEecc
Confidence 334445554 5568899999999888777788888888999999998753
No 151
>PF08822 DUF1804: Protein of unknown function (DUF1804); InterPro: IPR014926 This entry is represented by Bacteriophage D3112, Orf24. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=23.29 E-value=1.4e+02 Score=29.80 Aligned_cols=88 Identities=20% Similarity=0.348 Sum_probs=62.2
Q ss_pred ccCcchhHHHHHHHH-HHHHHhhchhhhhHhcCCCchhHHHHHHhhhhhhccCCCCCCCCCCCChHHHHHHHH-------
Q 007438 152 EVGEWEPIRTLKMRL-REFERKRELSVEEIFGGFKSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLV------- 223 (604)
Q Consensus 152 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 223 (604)
..+||..+|.-+.-- ..+|.-+.. + -++|+..++..|..++ +..++||-+=.++|+.|-
T Consensus 46 ~GDDWDk~RaA~~laggg~e~v~~~----~-----l~~f~~Q~~~tmeel~----~~~~~~~~~k~~~LasLaDsf~K~v 112 (165)
T PF08822_consen 46 KGDDWDKARAAHTLAGGGIEDVARQ----M-----LEDFVVQYQATMEELK----ENEDMPPQEKVELLASLADSFSKMV 112 (165)
T ss_pred cCCcHHHHHHHHHhccCcHHHHHHH----H-----HHHHHHHHHHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHH
Confidence 489999999765411 112221111 1 1578888888888887 667899999999998873
Q ss_pred ---HhhcccccccccchhhhHHHHHHHhhhhh
Q 007438 224 ---RQSGPFLDHLGVKRDLCDKIVESLCSKRK 252 (604)
Q Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (604)
|+--|=.+.|+|-.++.+.+.+-+..+.-
T Consensus 113 aaskr~lPets~LavA~~vl~~l~~fv~e~~P 144 (165)
T PF08822_consen 113 AASKRVLPETSELAVAMEVLELLAAFVQERYP 144 (165)
T ss_pred HHHhhcCchHHHHHHHHHHHHHHHHHHHhcCH
Confidence 56678889999988888887776665443
No 152
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=22.50 E-value=1.5e+02 Score=31.43 Aligned_cols=75 Identities=24% Similarity=0.297 Sum_probs=48.5
Q ss_pred CccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC-CcEEEEEEcChh-hHHhhhccchhHHH-HHHHHHHHHH
Q 007438 405 SIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF-NHVVGVVHTNYL-EYIKREKNGALQAF-FVKHINNWVT 481 (604)
Q Consensus 405 SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf-~PVVgiyHTNY~-eYary~~~G~l~ap-lvR~~~r~~~ 481 (604)
.+.+..|..-+++...+|++++-+|+-= +..-+=+-|. .|+||++-||-+ +|+.|--=|.--.+ .+..+++.+.
T Consensus 158 ~~~~~pd~~~f~~t~~~D~vvvln~~e~---~sAilEA~K~~IPTIgIVDtN~~P~liTYpVPaNDDs~~sv~f~~~l~k 234 (251)
T KOG0832|consen 158 KFLSLPDALCFLPTLTPDLVVVLNPEEN---HSAILEAAKMAIPTIGIVDTNCNPELITYPVPANDDSPASVEFILNLLK 234 (251)
T ss_pred cccCCCcceeecccCCcceeEecCcccc---cHHHHHHHHhCCCeEEEecCCCCccceeeccCCCCCcHHHHHHHHHHHH
Confidence 4577888888999999999998876321 1112233444 499999999988 88887422332233 4555555444
Q ss_pred H
Q 007438 482 R 482 (604)
Q Consensus 482 r 482 (604)
+
T Consensus 235 ~ 235 (251)
T KOG0832|consen 235 R 235 (251)
T ss_pred H
Confidence 4
No 153
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=21.54 E-value=37 Score=33.74 Aligned_cols=61 Identities=16% Similarity=0.352 Sum_probs=45.6
Q ss_pred CchhHHHHHHhhhhhhccCCCCCCCCCCCChHHHHHHHHH---hhcccccccccchhhhHHHHHHHhh
Q 007438 185 KSSDFVEKVKSSWKAICKEPEESKDVPPLDPTELLAHLVR---QSGPFLDHLGVKRDLCDKIVESLCS 249 (604)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (604)
||.||+++++..|++.++..++.+++ +.|+|.+|+. +--+--|=+|=.+.-|+.+++.+-.
T Consensus 5 kN~~y~~~l~~~L~~~~~~e~~~e~~----L~eil~~LleaQk~G~tA~~lfG~P~~~a~eli~~~~k 68 (206)
T PF06570_consen 5 KNQEYIFDLRKYLRSSGVSEEEIEEL----LEEILPHLLEAQKKGKTARQLFGDPKEYADELIKPLPK 68 (206)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHH----HHHHHHHHHHHHhCCCcHHHHcCCHHHHHHHHhccccC
Confidence 57999999999998888777776665 7788888774 2334556677667778888877654
No 154
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=20.89 E-value=4.6e+02 Score=31.35 Aligned_cols=80 Identities=20% Similarity=0.217 Sum_probs=45.7
Q ss_pred HHHhhCCceeeCchhhhh----ccCCcceeE--EeecCCCCCCCccch----h-hhh---------hcc----CCCCceE
Q 007438 480 VTRAYCDKVLRLSAATQD----LPKSVICNV--HGVNPKFLQIGEKVA----T-DRE---------QGQ----QAFSKGA 535 (604)
Q Consensus 480 ~~r~yCdkVI~LS~avq~----l~ks~V~nV--hGVdp~fF~pg~r~a----~-rr~---------~g~----~~~~Kvv 535 (604)
.+..++|-.-+.|+.+.. +++.....| -|++.++|....... . +.+ +|. .+++..+
T Consensus 217 aaA~~AdvFTTVSeITa~Ea~~LL~r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ 296 (633)
T PF05693_consen 217 AAAHYADVFTTVSEITAKEAEHLLKRKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYF 296 (633)
T ss_dssp HHHHHSSEEEESSHHHHHHHHHHHSS--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEE
T ss_pred HHHHhcCeeeehhhhHHHHHHHHhCCCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEEE
Confidence 344488988888887766 333222233 399988887654211 1 111 121 1234445
Q ss_pred EEEecccc-ccCHHHHHHHHHHhhc
Q 007438 536 YFLGKMVW-AKGYRELIDLLAKHKN 559 (604)
Q Consensus 536 LFVGRLvw-EKGfD~LLdl~~~v~~ 559 (604)
.-.||... -||+|.+||++.+++.
T Consensus 297 ftsGRYEf~NKG~D~fieAL~rLn~ 321 (633)
T PF05693_consen 297 FTSGRYEFRNKGIDVFIEALARLNH 321 (633)
T ss_dssp EEESSS-TTTTTHHHHHHHHHHHHH
T ss_pred EeeeceeeecCCccHHHHHHHHHHH
Confidence 56799875 5999999999988854
No 155
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=20.11 E-value=1.5e+02 Score=28.75 Aligned_cols=48 Identities=29% Similarity=0.243 Sum_probs=32.9
Q ss_pred CcccccCCCCCC-------CCCCceEEEEecCCCCcccchhhhHHHHHHHHhhcC
Q 007438 294 GGFWTDFGKDDL-------SDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTE 341 (604)
Q Consensus 294 ~~~~~~~~~~~~-------~~~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G 341 (604)
=|||++....+- +=.+++|++|.|+-.++.+.-+-.-+-++..|-..+
T Consensus 45 lG~w~d~G~~d~~~~~fl~~l~~KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~~~ 99 (160)
T PF12641_consen 45 LGFWIDKGTPDKDMKEFLKKLKGKKVALFGTAGAGPDSEYAKKILKNVEALLPKG 99 (160)
T ss_pred EEcCccCCCCCHHHHHHHHHccCCeEEEEEecCCCCchHHHHHHHHHHHHhhccC
Confidence 388988876541 114689999999999888777655555555554433
Done!