Query 007438
Match_columns 604
No_of_seqs 120 out of 137
Neff 3.8
Searched_HMMs 13730
Date Tue Mar 26 01:50:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007438.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007438hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rzua_ c.87.1.8 (A:) Glycogen 99.6 5.3E-16 3.8E-20 157.6 10.6 266 310-598 1-357 (477)
2 d2bisa1 c.87.1.8 (A:1-437) Gly 99.5 3.9E-14 2.9E-18 137.6 13.2 273 310-598 1-320 (437)
3 d2iw1a1 c.87.1.8 (A:2-371) Lip 99.3 1.9E-13 1.4E-17 127.4 4.5 115 483-597 134-262 (370)
4 d2bfwa1 c.87.1.8 (A:218-413) G 98.4 1.9E-07 1.4E-11 83.8 7.1 89 508-597 1-102 (196)
5 d2f9fa1 c.87.1.8 (A:2-167) Fir 97.8 4.1E-06 3E-10 73.3 3.9 64 532-599 12-79 (166)
6 d1uqta_ c.87.1.6 (A:) Trehalos 97.6 4E-05 2.9E-09 78.5 6.9 156 412-574 116-300 (456)
7 d1pn3a_ c.87.1.5 (A:) TDP-epi- 80.9 0.69 5E-05 42.2 4.6 33 310-350 1-36 (391)
8 d1rrva_ c.87.1.5 (A:) TDP-vanc 79.2 0.83 6E-05 41.8 4.6 33 310-350 1-36 (401)
9 d1iira_ c.87.1.5 (A:) UDP-gluc 72.5 1.6 0.00011 39.5 4.5 33 310-350 1-36 (401)
10 d1dkua1 c.61.1.2 (A:8-166) Pho 65.2 3.1 0.00022 36.8 4.7 51 308-359 47-97 (159)
11 d2c4ka1 c.61.1.2 (A:7-166) PRP 49.1 9.7 0.00071 33.4 5.2 50 308-358 50-99 (160)
12 d2vcha1 c.87.1.10 (A:6-476) Hy 42.8 9.6 0.0007 35.0 4.3 34 311-351 3-39 (471)
13 d2ihta1 c.31.1.3 (A:198-374) C 41.6 17 0.0012 31.0 5.4 51 543-598 5-59 (177)
14 d2pq6a1 c.87.1.10 (A:8-480) (I 41.1 11 0.00078 34.6 4.3 33 311-350 3-37 (473)
15 d1f0ka_ c.87.1.2 (A:) Peptidog 41.0 42 0.0031 29.4 8.3 45 411-457 81-125 (351)
16 d1u9ya1 c.61.1.2 (A:1-155) Pho 39.7 18 0.0013 31.4 5.4 50 308-359 46-95 (155)
17 d2d1pa1 c.114.1.1 (A:1-128) tR 37.3 19 0.0014 29.8 5.0 37 310-348 1-38 (128)
18 d1fcda2 c.3.1.5 (A:115-255) Fl 26.6 81 0.0059 26.0 7.3 36 312-348 35-74 (141)
19 d1v4va_ c.87.1.3 (A:) UDP-N-ac 25.1 15 0.0011 35.0 2.5 203 382-598 50-263 (373)
20 d3bzka5 c.55.3.13 (A:325-473) 23.2 23 0.0017 30.5 3.0 76 504-585 5-81 (149)
21 d1q6za1 c.31.1.3 (A:182-341) B 23.2 43 0.0032 27.5 4.8 44 544-592 6-53 (160)
22 d1z21a1 a.243.1.2 (A:42-145) Y 21.2 8.1 0.00059 32.3 -0.4 23 206-229 43-65 (104)
23 d1vsra_ c.52.1.15 (A:) Very sh 21.0 12 0.00085 32.4 0.6 98 277-383 2-119 (134)
24 d1lvla2 c.3.1.5 (A:151-265) Di 20.9 1.1E+02 0.008 23.7 6.7 70 294-383 6-75 (115)
25 d1nhpa2 c.3.1.5 (A:120-242) NA 20.7 56 0.0041 26.0 4.9 52 545-597 13-64 (123)
26 d2hy5a1 c.114.1.1 (A:1-130) Su 20.3 63 0.0046 26.3 5.2 37 310-348 1-38 (130)
27 d2iida1 c.3.1.2 (A:4-319,A:433 20.2 59 0.0043 27.5 5.2 53 540-592 6-59 (370)
No 1
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}
Probab=99.61 E-value=5.3e-16 Score=157.55 Aligned_cols=266 Identities=15% Similarity=0.152 Sum_probs=147.7
Q ss_pred ceEEEEecCCCCcc-c-c--hhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCC----ceeCChhHHHHHHHHHHH
Q 007438 310 RNVAIVTTASLPWM-T-G--TAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPN----VTFCSPEEQENYMRNWLE 381 (604)
Q Consensus 310 r~IaIfTTAsLPWm-T-G--tAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn----~rF~SpeeQe~~ir~wl~ 381 (604)
|||++||.-+.|+. + | ++|--| |..|+++|| +|++++|-|+.-.+.. ++ +.+.+
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~L--a~~L~~~Gh-~V~Vi~P~y~~~~~~~--~~~~~~~~~~~------------- 62 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGAL--PIALEAHGV-RTRTLIPGYPAVKAAV--TDPVKCFEFTD------------- 62 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHH--HHHHHTTTC-EEEEEEECCHHHHHHC--CSCEEEEEESC-------------
T ss_pred CEEEEEEEeeecccccCcHHHHHHHH--HHHHHHcCC-eEEEEecCCcchhhhc--ccceEEEEEec-------------
Confidence 89999999999996 5 4 345556 478999999 9999999875211100 11 11111
Q ss_pred HHhCCC--------CCceeecc---------CCcccccccCccC-------------CccccccCCCCCCcEEEEcCcch
Q 007438 382 ERVGFK--------ADFKISFY---------PGKFSKERRSIIP-------------AGDTSQFIPSKDADIAILEEPEH 431 (604)
Q Consensus 382 ~r~g~~--------~~~~i~fY---------Pgry~a~~~SI~p-------------~gdI~r~L~~f~pDVVHLeEPeh 431 (604)
..|.+ ..++..+. .+.|....+..++ ..-+.+.+..++|||||+++ .+
T Consensus 63 -~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~-~~ 140 (477)
T d1rzua_ 63 -LLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHD-WQ 140 (477)
T ss_dssp -SSSCCEEEEEEEETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEH-HH
T ss_pred -cCCceEEEEEEEECCeeEEEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecc-hh
Confidence 00000 01111100 0111111111111 11234457778999999998 34
Q ss_pred hhhhcchhhhhcCC-CcEEEEEEcChhhHHhhh----ccch---hHHH-H---H--HHHHHHHHHhhCCceeeCchhhhh
Q 007438 432 LNWYHHGKRWTDKF-NHVVGVVHTNYLEYIKRE----KNGA---LQAF-F---V--KHINNWVTRAYCDKVLRLSAATQD 497 (604)
Q Consensus 432 LGwy~~Garwt~Kf-~PVVgiyHTNY~eYary~----~~G~---l~ap-l---v--R~~~r~~~r~yCdkVI~LS~avq~ 497 (604)
-++......+.... .|+|.++|+....+.... ..+. .... . . ..+-+..+. +||.+++.|....+
T Consensus 141 ~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ad~~~~vs~~~~~ 219 (477)
T d1rzua_ 141 AAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQ-TATALSTVSPSYAE 219 (477)
T ss_dssp HTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHH-HCSEEEESCHHHHH
T ss_pred HHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHH-hhhhhhhccHHHHH
Confidence 34442222233333 499999997532111000 0000 0000 0 0 001122233 89999999975433
Q ss_pred -cc---------------CCcceeE-EeecCCCCCCCccc-------------------hhhhhhcc-CCCCceEEEEec
Q 007438 498 -LP---------------KSVICNV-HGVNPKFLQIGEKV-------------------ATDREQGQ-QAFSKGAYFLGK 540 (604)
Q Consensus 498 -l~---------------ks~V~nV-hGVdp~fF~pg~r~-------------------a~rr~~g~-~~~~KvvLFVGR 540 (604)
.. ...+..| .||+.+.|+|.... ..+...+. .++.++++|+||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgr 299 (477)
T d1rzua_ 220 EILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISR 299 (477)
T ss_dssp HTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESC
T ss_pred HHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEee
Confidence 11 0112222 38888888764321 11122232 345678999999
Q ss_pred cccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHH--HHHHhcCCcEEEcCCCCCC
Q 007438 541 MVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQ--SAAKRLDLNLNFQKGRDHA 598 (604)
Q Consensus 541 LvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk--~~a~~LgL~V~FtG~ldha 598 (604)
++++||++.|++++.++.+. +.+++|+|+|+.....+ +.+.+++..|.|+|..++.
T Consensus 300 l~~~KG~~~Ll~a~~~~~~~--~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 357 (477)
T d1rzua_ 300 LTWQKGIDLMAEAVDEIVSL--GGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEP 357 (477)
T ss_dssp BSTTTTHHHHHTTHHHHHHT--TCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHH
T ss_pred eeecCCcHHHHHHHHHHHhh--CCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChh
Confidence 99999999999999887654 68899999998765444 4455555589999877653
No 2
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=99.51 E-value=3.9e-14 Score=137.58 Aligned_cols=273 Identities=13% Similarity=0.107 Sum_probs=145.8
Q ss_pred ceEEEEecCCCCccc-chh--hhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHHhCC
Q 007438 310 RNVAIVTTASLPWMT-GTA--VNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEERVGF 386 (604)
Q Consensus 310 r~IaIfTTAsLPWmT-GtA--VnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r~g~ 386 (604)
|+|+|||.-|.|--+ |++ +--| |.+|++.|| +|++++|-+.....+.+ .+++.... +...+ . ....
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~L--a~~L~~~Gh-~V~Vvtp~~~~~~~~~~-~~~~~~~~-~~~~~--~----~~~~ 69 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAI--SEALASLGH-EVLVFTPSHGRFQGEEI-GKIRVFGE-EVQVK--V----SYEE 69 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHH--HHHHHHTTC-EEEEEEECTTSSCCEEE-EEEECSSS-EEEEE--E----EEEE
T ss_pred CEEEEECCccCCcccCCHHHHHHHH--HHHHHHcCC-EEEEEecCCCccchhhc-cceeeccc-cccee--e----eeec
Confidence 899999999999866 554 5555 589999999 99999998764322211 11111100 00000 0 0000
Q ss_pred CCCceeeccCCcccccccCccC-----------------CccccccCC-CCCCcEEEEcCcchhhhhcchhhhhcCCC-c
Q 007438 387 KADFKISFYPGKFSKERRSIIP-----------------AGDTSQFIP-SKDADIAILEEPEHLNWYHHGKRWTDKFN-H 447 (604)
Q Consensus 387 ~~~~~i~fYPgry~a~~~SI~p-----------------~gdI~r~L~-~f~pDVVHLeEPehLGwy~~Garwt~Kf~-P 447 (604)
...+++...+..+...+ .++. +..+..++. ...|||||++++ +.++. +..+.+..+ |
T Consensus 70 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~-~~~~~--~~~~~~~~~~~ 145 (437)
T d2bisa1 70 RGNLRIYRIGGGLLDSE-DVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDW-HTVFA--GALIKKYFKIP 145 (437)
T ss_dssp ETTEEEEEEESSGGGCS-CTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETG-GGHHH--HHHHHHHHCCC
T ss_pred cCCeEEEecCccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCh-hhhhH--hhhhhccccCc
Confidence 01122222111111100 0000 011112233 345799999985 45666 333333334 8
Q ss_pred EEEEEEcChhhH-----HhhhccchhHHHHHHHHHHHHHHhhCCceeeCchhhhh-------ccCCcceeE-EeecCCCC
Q 007438 448 VVGVVHTNYLEY-----IKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQD-------LPKSVICNV-HGVNPKFL 514 (604)
Q Consensus 448 VVgiyHTNY~eY-----ary~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~-------l~ks~V~nV-hGVdp~fF 514 (604)
+|.++|...... .+..+............. ......+|.|++.+..... .....+..| .||++..|
T Consensus 146 ~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~ 224 (437)
T d2bisa1 146 AVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPE-HTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFW 224 (437)
T ss_dssp EEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHH-HHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTS
T ss_pred eeEEEeeccccccchhhhhhccchhhhhHHHHHHH-HHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccc
Confidence 899998764311 111111111000000111 2233478899888875442 112233333 49998888
Q ss_pred CCCccchh-------hhhhccCCCCceEEEEecccc-ccCHHHHHHHHHHhhc--cCCCcEEEEEecCCCHHH--HHHHH
Q 007438 515 QIGEKVAT-------DREQGQQAFSKGAYFLGKMVW-AKGYRELIDLLAKHKN--DLDGFKLDVFGNGEDAYE--VQSAA 582 (604)
Q Consensus 515 ~pg~r~a~-------rr~~g~~~~~KvvLFVGRLvw-EKGfD~LLdl~~~v~~--~~~~~kLdIVGDGPDree--Lk~~a 582 (604)
.+...... .+........++++|+||+.+ +||++.|++++..+.. ..++++|+|+|+|++..+ ++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~ 304 (437)
T d2bisa1 225 NESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLE 304 (437)
T ss_dssp CGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHH
T ss_pred cccccchhhHHHHHhhhhhhhccCCceEEEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhc
Confidence 76432111 112222345688999999975 6999999999987743 346899999999987654 33333
Q ss_pred HhcCCcEEEcCCCCCC
Q 007438 583 KRLDLNLNFQKGRDHA 598 (604)
Q Consensus 583 ~~LgL~V~FtG~ldha 598 (604)
...+..+.|.|..++.
T Consensus 305 ~~~~~~~~~~~~~~~~ 320 (437)
T d2bisa1 305 EKHGNVKVITEMLSRE 320 (437)
T ss_dssp HTCTTEEEECSCCCHH
T ss_pred cccccceeccccCcHH
Confidence 4334466777766543
No 3
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
Probab=99.34 E-value=1.9e-13 Score=127.45 Aligned_cols=115 Identities=17% Similarity=0.191 Sum_probs=86.0
Q ss_pred hhCCceeeCchhhhh-cc------CCcceeE-EeecCCCCCC----CccchhhhhhccCCCCceEEEEeccccccCHHHH
Q 007438 483 AYCDKVLRLSAATQD-LP------KSVICNV-HGVNPKFLQI----GEKVATDREQGQQAFSKGAYFLGKMVWAKGYREL 550 (604)
Q Consensus 483 ~yCdkVI~LS~avq~-l~------ks~V~nV-hGVdp~fF~p----g~r~a~rr~~g~~~~~KvvLFVGRLvwEKGfD~L 550 (604)
...+++|..++.... +. ...+..| .||++..+.+ ..+...+...+.+.+.++++|+||+..+||++.|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~l 213 (370)
T d2iw1a1 134 GKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRS 213 (370)
T ss_dssp TCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHH
T ss_pred ccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCCCccceEEEEEeccccccchhhh
Confidence 356677777765443 21 1222233 3888665433 2333345566777888999999999999999999
Q ss_pred HHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCC--cEEEcCCCCC
Q 007438 551 IDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDL--NLNFQKGRDH 597 (604)
Q Consensus 551 Ldl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL--~V~FtG~ldh 597 (604)
+++++.+.+..+...+.++|+|++.+++++.++++++ .++|+|..+.
T Consensus 214 i~a~~~l~~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 262 (370)
T d2iw1a1 214 IEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRND 262 (370)
T ss_dssp HHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSC
T ss_pred cccccccccccccceeeeccccccccccccccccccccccccccccccc
Confidence 9999988877777888889999999999999999988 8999998754
No 4
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=98.40 E-value=1.9e-07 Score=83.82 Aligned_cols=89 Identities=15% Similarity=0.209 Sum_probs=62.3
Q ss_pred eecCCCCCCCc--------cchhhhhhccCCCCceEEEEecccc-ccCHHHHHHHHHHhhc--cCCCcEEEEEecCCCHH
Q 007438 508 GVNPKFLQIGE--------KVATDREQGQQAFSKGAYFLGKMVW-AKGYRELIDLLAKHKN--DLDGFKLDVFGNGEDAY 576 (604)
Q Consensus 508 GVdp~fF~pg~--------r~a~rr~~g~~~~~KvvLFVGRLvw-EKGfD~LLdl~~~v~~--~~~~~kLdIVGDGPDre 576 (604)
|||.+.|++.. +...+.+.+. +..++++|+||+.. +||++.|+++++.+.. ..++++|+|+|+|+++.
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~ 79 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGM-DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPEL 79 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTC-CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHH
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCC-CCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeecccch
Confidence 89999997742 1122334555 57788999999984 8999999999998853 35789999999997653
Q ss_pred H--HHHHHHhcCCcEEEcCCCCC
Q 007438 577 E--VQSAAKRLDLNLNFQKGRDH 597 (604)
Q Consensus 577 e--Lk~~a~~LgL~V~FtG~ldh 597 (604)
+ ++.....+...+.|+|..++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~ 102 (196)
T d2bfwa1 80 EGWARSLEEKHGNVKVITEMLSR 102 (196)
T ss_dssp HHHHHHHHHHCTTEEEECSCCCH
T ss_pred hhhhhhhhhccceeEEeeecccc
Confidence 3 33333443445667776654
No 5
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.84 E-value=4.1e-06 Score=73.33 Aligned_cols=64 Identities=11% Similarity=0.076 Sum_probs=49.4
Q ss_pred CceEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHH---HHHhcCC-cEEEcCCCCCCc
Q 007438 532 SKGAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQS---AAKRLDL-NLNFQKGRDHAD 599 (604)
Q Consensus 532 ~KvvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~---~a~~LgL-~V~FtG~ldhad 599 (604)
..-++|||||..+||++.++++++++ ++++++|+|.|++.+..++ .+.+... +|+|+|.+++.+
T Consensus 12 ~~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 79 (166)
T d2f9fa1 12 GDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEE 79 (166)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHH
T ss_pred CCEEEEEecCccccCHHHHHHHHHHh----cCCeEEEEEecccccchhhhhhhhcccccCcEEEeecccccc
Confidence 45588999999999999999998765 5788999998876554444 4444334 899999987643
No 6
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}
Probab=97.56 E-value=4e-05 Score=78.52 Aligned_cols=156 Identities=10% Similarity=0.020 Sum_probs=85.0
Q ss_pred ccccCCCCCCcEEEEcCcchhhhhcchhhhhcCC--CcEEEEEEcChhhHHhhhccc----------------hhHHHHH
Q 007438 412 TSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKF--NHVVGVVHTNYLEYIKREKNG----------------ALQAFFV 473 (604)
Q Consensus 412 I~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf--~PVVgiyHTNY~eYary~~~G----------------~l~aplv 473 (604)
+.+.+++ -|++++++ -||... +...+.+. .+++...|+.|..+--.-..+ +....-.
T Consensus 116 l~~~~~~--~d~iwvhD-yhl~ll--p~~lR~~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~ 190 (456)
T d1uqta_ 116 LLPLLQD--DDIIWIHD-YHLLPF--AHELRKRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDR 190 (456)
T ss_dssp HGGGCCT--TCEEEEES-GGGTTH--HHHHHHTTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHH
T ss_pred HHHhccC--CCeEEEec-cchhhh--HHHHHHhCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHH
Confidence 4444443 48999999 677777 43333332 388888999987554432222 2222222
Q ss_pred HHHHHHHHHhhCCceeeCchhhhhccCCcce-eE--EeecCCCCCCCccchh---hhh-hccCCCCceEEEEeccccccC
Q 007438 474 KHINNWVTRAYCDKVLRLSAATQDLPKSVIC-NV--HGVNPKFLQIGEKVAT---DRE-QGQQAFSKGAYFLGKMVWAKG 546 (604)
Q Consensus 474 R~~~r~~~r~yCdkVI~LS~avq~l~ks~V~-nV--hGVdp~fF~pg~r~a~---rr~-~g~~~~~KvvLFVGRLvwEKG 546 (604)
+.+.. +|........ .+.....+....+. .+ .|||+..|........ .++ .....+.+++++||||...||
T Consensus 191 ~~fl~-~~~~ll~~~~-~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~~~~~~~il~V~Rld~~KG 268 (456)
T d1uqta_ 191 LAFLD-CLSNLTRVTT-RSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKG 268 (456)
T ss_dssp HHHHH-HHHHHSCEEE-ETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTTCEEEEEECCBCGGGC
T ss_pred HHHHH-HHHHHhCccc-ccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHhcCCCeEEEEeCCCchhhc
Confidence 33322 2221222111 11111111111111 11 3888777754221111 111 111346789999999999999
Q ss_pred HHHHHHHHHHhhccCCC----cEEEEEecCCC
Q 007438 547 YRELIDLLAKHKNDLDG----FKLDVFGNGED 574 (604)
Q Consensus 547 fD~LLdl~~~v~~~~~~----~kLdIVGDGPD 574 (604)
++.+|++|.++.+..|+ +.|+++|.|+.
T Consensus 269 i~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~ 300 (456)
T d1uqta_ 269 LPERFLAYEALLEKYPQHHGKIRYTQIAPTSR 300 (456)
T ss_dssp HHHHHHHHHHHHHHCGGGTTTEEEEEECCBCS
T ss_pred hHHHHHHHHHHHHhCccccccEEEEEEcCCcc
Confidence 99999999998776665 46788887764
No 7
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=80.86 E-value=0.69 Score=42.17 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=27.4
Q ss_pred ceEEEEecCCCCcccchh--hhHHHH-HHHHhhcCCceEEEEee
Q 007438 310 RNVAIVTTASLPWMTGTA--VNPLFR-AAYLAKTEQQNVTLLVP 350 (604)
Q Consensus 310 r~IaIfTTAsLPWmTGtA--VnpL~R-AayLak~G~~~VtL~vP 350 (604)
|||-|+| .||. |+|++. |.+|++.|| +||++.|
T Consensus 1 mril~~~-------~gt~Ghi~P~laLA~~L~~rGh-~V~~~~~ 36 (391)
T d1pn3a_ 1 MRVLITG-------CGSRGDTEPLVALAARLRELGA-DARMCLP 36 (391)
T ss_dssp CEEEEEE-------ESSHHHHHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CEEEEEc-------CCChhHHHHHHHHHHHHHHCCC-EEEEEEC
Confidence 8888866 6776 999875 678999999 9999964
No 8
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}
Probab=79.22 E-value=0.83 Score=41.77 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=27.7
Q ss_pred ceEEEEecCCCCcccchh--hhHHHH-HHHHhhcCCceEEEEee
Q 007438 310 RNVAIVTTASLPWMTGTA--VNPLFR-AAYLAKTEQQNVTLLVP 350 (604)
Q Consensus 310 r~IaIfTTAsLPWmTGtA--VnpL~R-AayLak~G~~~VtL~vP 350 (604)
|||.|+|- ||. |+|++. |..|.+.|| +||++.|
T Consensus 1 mrIl~~~~-------gt~Ghv~P~l~lA~~L~~rGh-~V~~~t~ 36 (401)
T d1rrva_ 1 MRVLLSVC-------GTRGDVEIGVALADRLKALGV-QTRMCAP 36 (401)
T ss_dssp CEEEEEEE-------SCHHHHHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CeEEEECC-------CChhHHHHHHHHHHHHHHCCC-EEEEEEC
Confidence 89999983 676 999994 568999999 9999964
No 9
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=72.52 E-value=1.6 Score=39.48 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=26.3
Q ss_pred ceEEEEecCCCCcccchh--hhHHHH-HHHHhhcCCceEEEEee
Q 007438 310 RNVAIVTTASLPWMTGTA--VNPLFR-AAYLAKTEQQNVTLLVP 350 (604)
Q Consensus 310 r~IaIfTTAsLPWmTGtA--VnpL~R-AayLak~G~~~VtL~vP 350 (604)
|+|.|++ .||. |||++. |..|.+.|| +||++.+
T Consensus 1 mkil~~~-------~gt~Gh~~P~lala~~L~~~Gh-~V~~~~~ 36 (401)
T d1iira_ 1 MRVLLAT-------CGSRGDTEPLVALAVRVRDLGA-DVRMCAP 36 (401)
T ss_dssp CEEEEEC-------CSCHHHHHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CEEEEEC-------CCChhHHHHHHHHHHHHHHCCC-EEEEEeC
Confidence 8888866 3666 999775 678899999 8999964
No 10
>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=65.21 E-value=3.1 Score=36.75 Aligned_cols=51 Identities=14% Similarity=0.312 Sum_probs=39.7
Q ss_pred CCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCccc
Q 007438 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQEL 359 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~ 359 (604)
.+.+|.|+-+++-| .+--.++.|+-+.-+.+.|-.+||+++|+|+=+-|..
T Consensus 47 rg~dv~ivqs~~~~-~nd~lmelll~~~a~k~~~A~~i~~ViPY~~YsRQDr 97 (159)
T d1dkua1 47 RGCDCYIIQSTSDP-VNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDR 97 (159)
T ss_dssp TTCEEEEECCCCSS-HHHHHHHHHHHHHHHHHTTCSEEEEEESSCTTTTCCS
T ss_pred CCCceEEEecCCCC-cHHHHHHHHHHHHHHHHcCCcceEEeecccchhhhcc
Confidence 36889999777643 3444488888888888889889999999999777763
No 11
>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.05 E-value=9.7 Score=33.39 Aligned_cols=50 Identities=18% Similarity=0.262 Sum_probs=37.8
Q ss_pred CCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcc
Q 007438 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQE 358 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe 358 (604)
.+.+|-||.+.+-| .+-..+..|+=+.-+.+.|-.+||+|+|.++=+-|.
T Consensus 50 rg~~V~ivqs~~~~-~n~~lmeLll~~da~k~~~a~~It~ViPY~~YaRQD 99 (160)
T d2c4ka1 50 RGQDIFIIQTIPRD-VNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQS 99 (160)
T ss_dssp TTCCEEEECCCCSC-HHHHHHHHHHHHHHHHHTTCSCEEEEESSCTTTTTT
T ss_pred cCCceEEEeccCcc-hHHHHHHHHHHHHHHHHhCcccceeecccchhhhcc
Confidence 36889999877655 333347777767777888877999999999977775
No 12
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=42.84 E-value=9.6 Score=35.04 Aligned_cols=34 Identities=32% Similarity=0.517 Sum_probs=24.4
Q ss_pred eEEEEecCCCCcccchh-hhHHHH-HHHHhh-cCCceEEEEeec
Q 007438 311 NVAIVTTASLPWMTGTA-VNPLFR-AAYLAK-TEQQNVTLLVPW 351 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtA-VnpL~R-AayLak-~G~~~VtL~vPW 351 (604)
||.+|+. | +.. +||++. |..|++ .|| +||+++|-
T Consensus 3 hil~~p~---p---~~GH~~P~l~La~~L~~~rGH-~Vt~v~~~ 39 (471)
T d2vcha1 3 HVAIIPS---P---GMGHLIPLVEFAKRLVHLHGL-TVTFVIAG 39 (471)
T ss_dssp EEEEECC---S---CHHHHHHHHHHHHHHHHHHCC-EEEEEECC
T ss_pred EEEEECc---h---hHhHHHHHHHHHHHHHHccCC-EEEEEeCC
Confidence 8888852 2 233 899997 447864 799 99999753
No 13
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=41.59 E-value=17 Score=31.01 Aligned_cols=51 Identities=20% Similarity=0.246 Sum_probs=38.2
Q ss_pred cccCHHHHHHHHHHhhccCCCcEEEEEecC----CCHHHHHHHHHhcCCcEEEcCCCCCC
Q 007438 543 WAKGYRELIDLLAKHKNDLDGFKLDVFGNG----EDAYEVQSAAKRLDLNLNFQKGRDHA 598 (604)
Q Consensus 543 wEKGfD~LLdl~~~v~~~~~~~kLdIVGDG----PDreeLk~~a~~LgL~V~FtG~ldha 598 (604)
++|-++++++++..- .-.+.|+|.| ...++|.+.++++|++|..+..-.+.
T Consensus 5 ~~~~i~~a~~lL~~A-----krPvii~G~g~~~~~a~~~l~~lae~~~iPv~~t~~~kg~ 59 (177)
T d2ihta1 5 WQKAADQAAALLAEA-----KHPVLVVGAAAIRSGAVPAIRALAERLNIPVITTYIAKGV 59 (177)
T ss_dssp HHHHHHHHHHHHHHC-----SSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECSTTTTS
T ss_pred CHHHHHHHHHHHHhC-----CCEEEEECcCcchhhhHHHHHHHhhcceEEEEeccccccC
Confidence 567788888887542 2359999988 46789999999999988766554443
No 14
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=41.15 E-value=11 Score=34.64 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=24.9
Q ss_pred eEEEEecCCCCcccchh-hhHHHH-HHHHhhcCCceEEEEee
Q 007438 311 NVAIVTTASLPWMTGTA-VNPLFR-AAYLAKTEQQNVTLLVP 350 (604)
Q Consensus 311 ~IaIfTTAsLPWmTGtA-VnpL~R-AayLak~G~~~VtL~vP 350 (604)
||.||+ |. +.. +|||+. |..|++.|| +||+++|
T Consensus 3 hvl~~p-----~p-~~gH~~P~~~lA~~L~~rGH-~Vt~~~~ 37 (473)
T d2pq6a1 3 HVVMIP-----YP-VQGHINPLFKLAKLLHLRGF-HITFVNT 37 (473)
T ss_dssp EEEEEC-----CS-SHHHHHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred EEEEEC-----ch-hhhHHHHHHHHHHHHHHCCC-eEEEEeC
Confidence 788875 32 234 899984 558999999 9999875
No 15
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=40.97 E-value=42 Score=29.41 Aligned_cols=45 Identities=9% Similarity=-0.025 Sum_probs=25.0
Q ss_pred cccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCCcEEEEEEcChh
Q 007438 411 DTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYL 457 (604)
Q Consensus 411 dI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~PVVgiyHTNY~ 457 (604)
.....+.++++|+++..-+ .+.....-.++..+ .|++.+.++...
T Consensus 81 ~~~~i~~~~~~~~~~~~~~-~~~~~~~~~a~~~~-ip~~~~~~~~~~ 125 (351)
T d1f0ka_ 81 QARAIMKAYKPDVVLGMGG-YVSGPGGLAAWSLG-IPVVLHEQNGIA 125 (351)
T ss_dssp HHHHHHHHHCCSEEEECSS-TTHHHHHHHHHHTT-CCEEEEECSSSC
T ss_pred HHHHHhhccccceeeeccc-chhhhhhhhhhhcc-cceeeccccccc
Confidence 3445678889999876543 22222112223333 498887766543
No 16
>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=39.71 E-value=18 Score=31.39 Aligned_cols=50 Identities=18% Similarity=0.329 Sum_probs=36.1
Q ss_pred CCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCccc
Q 007438 308 KKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQEL 359 (604)
Q Consensus 308 ~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~ 359 (604)
.+++|.|+.+.+ | -+-.-+.-|+=+.-|.+.|-.+||+|+|.++=+-|+.
T Consensus 46 rg~~vvvi~s~~-~-~~d~lmelll~~da~~~~~a~~I~~ViPY~~YaRQDr 95 (155)
T d1u9ya1 46 NDDEAVIINTQK-N-QNDAIVETILLCDALRDEGVKKITLVAPYLAYARQDK 95 (155)
T ss_dssp CSSEEEEECCCS-S-HHHHHHHHHHHHHHHHTTTCCEEEEECSSCTTCSCSS
T ss_pred CCceeEEEeccc-c-cchHHHHHHHHHHHHHHhCCcceEEecccchhhcccc
Confidence 368898888743 2 2333356666666778888789999999999777764
No 17
>d2d1pa1 c.114.1.1 (A:1-128) tRNA 2-thiouridine synthesizing protein D, TusD {Escherichia coli [TaxId: 562]}
Probab=37.32 E-value=19 Score=29.82 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=29.0
Q ss_pred ceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceE-EEE
Q 007438 310 RNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNV-TLL 348 (604)
Q Consensus 310 r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~V-tL~ 348 (604)
|++.|+-++ -||-+.-+.+.|.=|.-+-+.|| +| +||
T Consensus 1 Mk~~i~v~~-~P~~~~~a~~A~~fA~aal~~Gh-~V~~vF 38 (128)
T d2d1pa1 1 MRFAIVVTG-PAYGTQQASSAFQFAQALIADGH-ELSSVF 38 (128)
T ss_dssp CEEEEEECS-CSSSSSHHHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CEEEEEEec-CCCCcHHHHHHHHHHHHHHhCCC-ceeEEE
Confidence 788777665 48877777888776888888999 77 587
No 18
>d1fcda2 c.3.1.5 (A:115-255) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=26.64 E-value=81 Score=26.00 Aligned_cols=36 Identities=17% Similarity=0.319 Sum_probs=28.1
Q ss_pred EEEEecCCCCcccchh---hhHHHHHHHHhhcCC-ceEEEE
Q 007438 312 VAIVTTASLPWMTGTA---VNPLFRAAYLAKTEQ-QNVTLL 348 (604)
Q Consensus 312 IaIfTTAsLPWmTGtA---VnpL~RAayLak~G~-~~VtL~ 348 (604)
.+|||....|+.-+.| +.-|. +.||.+.|. .+|.|.
T Consensus 35 ~vv~t~p~~P~kCpgAP~e~a~l~-~~~lr~~g~r~kv~i~ 74 (141)
T d1fcda2 35 TVVIAPPAAPFRCPPGPYERASQV-AYYLKAHKPMSKVIIL 74 (141)
T ss_dssp CEEEECCCSSCSSTTHHHHHHHHH-HHHHGGGCSCCCEEEE
T ss_pred eEEEecCCCCccCCchHHHHHHHH-HHHHHHcCCCCcEEEE
Confidence 5689999999999999 55555 688888885 366666
No 19
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}
Probab=25.13 E-value=15 Score=35.03 Aligned_cols=203 Identities=12% Similarity=0.031 Sum_probs=101.5
Q ss_pred HHhCCCCCceeeccCCccc-ccccCccCCccccccCCCCCCcEEEEcCcchhhhhcchhhhhcCCC-cEEEEEEcChhhH
Q 007438 382 ERVGFKADFKISFYPGKFS-KERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEY 459 (604)
Q Consensus 382 ~r~g~~~~~~i~fYPgry~-a~~~SI~p~gdI~r~L~~f~pDVVHLeEPehLGwy~~Garwt~Kf~-PVVgiyHTNY~eY 459 (604)
+..|+.++..+.+....+. +..-+ .-+..+.+++.+++||+|++.- ....-++ ++..+...+ |+++++= -
T Consensus 50 ~~~~i~~d~~l~~~~~~~s~~~~~~-~~~~~~~~~l~~~kPD~vlv~G-Dr~e~la-~a~aa~~~~ipi~Hieg-G---- 121 (373)
T d1v4va_ 50 SLFGIQEDRNLDVMQERQALPDLAA-RILPQAARALKEMGADYVLVHG-DTLTTFA-VAWAAFLEGIPVGHVEA-G---- 121 (373)
T ss_dssp HTTTCCCSEECCCCSSCCCHHHHHH-HHHHHHHHHHHHTTCSEEEEES-SCHHHHH-HHHHHHHTTCCEEEETC-C----
T ss_pred hhcCCCccccCCCCCCCCCHHHHHH-HHHHHHhhhhhhcCcccccccc-cCccchh-HHHHHHHhhhhheeecc-c----
Confidence 3467776655444333322 11111 1223566679999999988776 3333332 222333333 8664431 0
Q ss_pred HhhhccchhHHHHHHHHHHHHHHhhCCceeeCchhhhh-ccCCcc--eeEE--eec-CCCCCCCccchhhhhhccCCCCc
Q 007438 460 IKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQD-LPKSVI--CNVH--GVN-PKFLQIGEKVATDREQGQQAFSK 533 (604)
Q Consensus 460 ary~~~G~l~aplvR~~~r~~~r~yCdkVI~LS~avq~-l~ks~V--~nVh--GVd-p~fF~pg~r~a~rr~~g~~~~~K 533 (604)
..-|.+..++.--++|.++...+|.-+++|..-.+ +.+.++ .+|+ |=. .+-+....+. .+.....+....
T Consensus 122 ---~rsg~~~~~~~de~~R~~iskls~~hf~~t~~~~~~L~~~Ge~~~~I~~vG~p~~D~i~~~~~~-~~~~~~~~~~~~ 197 (373)
T d1v4va_ 122 ---LRSGNLKEPFPEEANRRLTDVLTDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDAVLLAAKL-GRLPEGLPEGPY 197 (373)
T ss_dssp ---CCCSCTTSSTTHHHHHHHHHHHCSEEEESSHHHHHHHHTTTCCGGGEEECCCHHHHHHHHHHHH-CCCCTTCCSSCE
T ss_pred ---ccccccccCcchhhhhhhhccccceeeecchhhhhhhhhhcccccceeecccchhhHHHhhhhh-cccccccccccc
Confidence 00122222233345566667788888889886655 444322 2332 311 0011000000 001122344567
Q ss_pred eEEEEeccccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHH-Hhc--CCcEEEcCCCCCC
Q 007438 534 GAYFLGKMVWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAA-KRL--DLNLNFQKGRDHA 598 (604)
Q Consensus 534 vvLFVGRLvwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a-~~L--gL~V~FtG~ldha 598 (604)
+++.+-|....++...++.++..+......+.+.+.. .+. ...+... ..+ .-++.|+..+.+.
T Consensus 198 ~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~-~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~ 263 (373)
T d1v4va_ 198 VTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPV-HLN-PVVREAVFPVLKGVRNFVLLDPLEYG 263 (373)
T ss_dssp EEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEEC-CSC-HHHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred eeEEeccccccchHHHHHHHHHHHhhhcccceeeeee-ccc-ccchhhhhhhhcccccceeeccchHH
Confidence 7888999998888888888887777666666554432 222 2222222 111 1277777766543
No 20
>d3bzka5 c.55.3.13 (A:325-473) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=23.22 E-value=23 Score=30.55 Aligned_cols=76 Identities=28% Similarity=0.359 Sum_probs=42.5
Q ss_pred eeEEeecCCCCCCCccchhhhhhccCCCCceEEEEecc-ccccCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHH
Q 007438 504 CNVHGVNPKFLQIGEKVATDREQGQQAFSKGAYFLGKM-VWAKGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAA 582 (604)
Q Consensus 504 ~nVhGVdp~fF~pg~r~a~rr~~g~~~~~KvvLFVGRL-vwEKGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a 582 (604)
..|-||||.| ..|=+.+...+.|.--..-++|..+.. ..++--..|.++++++ ...++++|+|....++++.+
T Consensus 5 ~~vlg~DPg~-r~gck~AvlD~~G~vld~~viyp~~~~~~~~~a~~~l~~li~k~-----~p~vIaIGNgTasre~~~~v 78 (149)
T d3bzka5 5 RATLGLDPGL-RTGVKVAVVDATGKLLDTATVYPHAPKNQWDQTLAVLAALCAKH-----QVELIAIGNGTASRETDKLA 78 (149)
T ss_dssp CCEEEEECCS-TTCEEEEEECTTSCEEEEEEECCSTTTCCHHHHHHHHHHHHHHT-----TCCEEEEESSTTHHHHHHHH
T ss_pred ceEEEECCCc-ccccEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHHHc-----CCeEEEECCCccHHHHHHHH
Confidence 3578999954 666655554444321122222222211 2333344455555443 34577789999999999888
Q ss_pred Hhc
Q 007438 583 KRL 585 (604)
Q Consensus 583 ~~L 585 (604)
.++
T Consensus 79 ~~l 81 (149)
T d3bzka5 79 GEL 81 (149)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 21
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]}
Probab=23.17 E-value=43 Score=27.51 Aligned_cols=44 Identities=16% Similarity=0.128 Sum_probs=32.7
Q ss_pred ccCHHHHHHHHHHhhccCCCcEEEEEecC----CCHHHHHHHHHhcCCcEEEc
Q 007438 544 AKGYRELIDLLAKHKNDLDGFKLDVFGNG----EDAYEVQSAAKRLDLNLNFQ 592 (604)
Q Consensus 544 EKGfD~LLdl~~~v~~~~~~~kLdIVGDG----PDreeLk~~a~~LgL~V~Ft 592 (604)
++.++.+++.+.. ..-.+.|+|.| ...+++.+.+.++|+.|.-+
T Consensus 6 ~~~ld~~~~~l~~-----A~rPvii~G~g~~~~~~~~~l~~lae~l~~pv~~t 53 (160)
T d1q6za1 6 DQDLDILVKALNS-----ASNPAIVLGPDVDAANANADCVMLAERLKAPVWVA 53 (160)
T ss_dssp HHHHHHHHHHHHH-----CSSCEEEECHHHHHTTCHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHh-----CCCEEEEECcCccccccchHHHHHHHhcCceEEee
Confidence 4567778877744 22348999999 67799999999999976544
No 22
>d1z21a1 a.243.1.2 (A:42-145) Yop proteins translocation protein H, YscH (IcrP) {Yersinia pestis [TaxId: 632]}
Probab=21.23 E-value=8.1 Score=32.35 Aligned_cols=23 Identities=30% Similarity=0.511 Sum_probs=18.1
Q ss_pred CCCCCCCCChHHHHHHHHHhhccc
Q 007438 206 ESKDVPPLDPTELLAHLVRQSGPF 229 (604)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~ 229 (604)
..--+||+|.||| ..+|||.-|+
T Consensus 43 ql~v~p~~D~pEL-ra~lrEf~P~ 65 (104)
T d1z21a1 43 QGSVVPAIDLPEL-RSVLQQFDSF 65 (104)
T ss_dssp CSCCCHHHHHHHH-HHHHHHHSCS
T ss_pred ccCCCCccchHHH-HHHHHHhCcc
Confidence 3456899999996 4578998885
No 23
>d1vsra_ c.52.1.15 (A:) Very short patch repair (VSR) endonuclease {Escherichia coli [TaxId: 562]}
Probab=20.99 E-value=12 Score=32.45 Aligned_cols=98 Identities=17% Similarity=0.259 Sum_probs=61.1
Q ss_pred ccchhhhccccCcccccCcccccCCCCCCCCCCceEEEEecCCC----Cc--ccchhhhH------H--------HHHHH
Q 007438 277 LDLRIASVLQSTGHHYEGGFWTDFGKDDLSDKKRNVAIVTTASL----PW--MTGTAVNP------L--------FRAAY 336 (604)
Q Consensus 277 l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~IaIfTTAsL----PW--mTGtAVnp------L--------~RAay 336 (604)
+.+.+++.|.+.||+|.-.-=.-+.+.++-=++.+++||-+-.+ |+ .+-..-|+ + .+-+.
T Consensus 2 ~E~~lr~~L~~~G~RyR~~~k~lpG~PDiv~~~~k~aIfvdGcFWH~h~c~~~~~Pktn~efW~~Ki~~N~~RD~~~~~~ 81 (134)
T d1vsra_ 2 IEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISR 81 (134)
T ss_dssp CCHHHHHHHHHTTCCCEESCTTSTTCCSEEEGGGTEEEEEECTTTTTCSSTTCCCCSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEecCCCCCCCCCEeecCccEEEEEcCccccCCCccccCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999998876667777787778999999998754 21 11111221 1 12356
Q ss_pred HhhcCCceEEEEeecCCCCCcccccCCceeCChhHHHHHHHHHHHHH
Q 007438 337 LAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQENYMRNWLEER 383 (604)
Q Consensus 337 Lak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe~~ir~wl~~r 383 (604)
|.+.|- .|-.| |=|. . .+-+--.-++-..-|.+||+..
T Consensus 82 L~~~GW-~vl~i--WEce----l--k~~~~~~~e~i~~~L~~~l~~~ 119 (134)
T d1vsra_ 82 LQELGW-RVLIV--WECA----L--RGREKLTDEALTERLEEWICGE 119 (134)
T ss_dssp HHHTTC-EEEEE--EHHH----H--SSTTCCCHHHHHHHHHHHHHTT
T ss_pred HHHCCC-EEEEE--ecCc----c--CCcccccHHHHHHHHHHHHhCC
Confidence 788888 55554 6321 0 1111123345566788888653
No 24
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}
Probab=20.88 E-value=1.1e+02 Score=23.68 Aligned_cols=70 Identities=14% Similarity=0.111 Sum_probs=0.0
Q ss_pred CcccccCCCCCCCCCCceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceEEEEeecCCCCCcccccCCceeCChhHHH
Q 007438 294 GGFWTDFGKDDLSDKKRNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNVTLLVPWLCKSDQELVYPNVTFCSPEEQE 373 (604)
Q Consensus 294 ~~~~~~~~~~~~~~~~r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~VtL~vPWl~~~dqe~vypn~rF~SpeeQe 373 (604)
+-.||...-+++....++|+|+ |--..-+-=|..|++.|+ +|||+ ...+.+.|.+ +|+- .
T Consensus 6 ~~~~~s~~~l~~~~~p~~vvIi---------GgG~~G~E~A~~l~~~g~-~Vtlv------e~~~~il~~~---d~~~-~ 65 (115)
T d1lvla2 6 GPVISSTEALAPKALPQHLVVV---------GGGYIGLELGIAYRKLGA-QVSVV------EARERILPTY---DSEL-T 65 (115)
T ss_dssp TTEECHHHHTCCSSCCSEEEEE---------CCSHHHHHHHHHHHHHTC-EEEEE------CSSSSSSTTS---CHHH-H
T ss_pred CcEECChHHhCcccCCCeEEEE---------CCCHHHHHHHHHHhhccc-ceEEE------eeeccccccc---cchh-H
Q ss_pred HHHHHHHHHH
Q 007438 374 NYMRNWLEER 383 (604)
Q Consensus 374 ~~ir~wl~~r 383 (604)
.+++++++++
T Consensus 66 ~~l~~~l~~~ 75 (115)
T d1lvla2 66 APVAESLKKL 75 (115)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
No 25
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}
Probab=20.70 E-value=56 Score=26.00 Aligned_cols=52 Identities=21% Similarity=0.159 Sum_probs=35.2
Q ss_pred cCHHHHHHHHHHhhccCCCcEEEEEecCCCHHHHHHHHHhcCCcEEEcCCCCC
Q 007438 545 KGYRELIDLLAKHKNDLDGFKLDVFGNGEDAYEVQSAAKRLDLNLNFQKGRDH 597 (604)
Q Consensus 545 KGfD~LLdl~~~v~~~~~~~kLdIVGDGPDreeLk~~a~~LgL~V~FtG~ldh 597 (604)
++++...++-.... ....-+++|+|.|+---++-..+.++|.+|+..-..++
T Consensus 13 ~~~~da~~i~~~~~-~~~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 13 RGRQWAIKLKQKTV-DPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp CHHHHHHHHHHHHT-CTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCHHHHHHHHHHhh-ccCCCEEEEECChHHHHHHHHHhhccceEEEEEEecCc
Confidence 34444444433322 22345899999999999998888999998887755543
No 26
>d2hy5a1 c.114.1.1 (A:1-130) Sulfurtransferase DsrE {Chromatium vinosum [TaxId: 1049]}
Probab=20.35 E-value=63 Score=26.29 Aligned_cols=37 Identities=8% Similarity=0.082 Sum_probs=29.0
Q ss_pred ceEEEEecCCCCcccchhhhHHHHHHHHhhcCCceE-EEE
Q 007438 310 RNVAIVTTASLPWMTGTAVNPLFRAAYLAKTEQQNV-TLL 348 (604)
Q Consensus 310 r~IaIfTTAsLPWmTGtAVnpL~RAayLak~G~~~V-tL~ 348 (604)
|+++|+-+ .=||-+-.+.+.|.=|.-+.+.|| +| ++|
T Consensus 1 Mk~~i~v~-~~P~~~~~a~~al~fA~aal~~gh-~V~~vF 38 (130)
T d2hy5a1 1 MKFALQIN-EGPYQHQASDSAYQFAKAALEKGH-EIFRVF 38 (130)
T ss_dssp CEEEEEEC-SCTTTSTHHHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CEEEEEEc-CCCCCcHHHHHHHHHHHHHHHCCC-eEEEEE
Confidence 78877774 458877777888877888888899 88 688
No 27
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Probab=20.19 E-value=59 Score=27.47 Aligned_cols=53 Identities=8% Similarity=0.122 Sum_probs=36.3
Q ss_pred ccccccCHHHHHHHHHHhhccCC-CcEEEEEecCCCHHHHHHHHHhcCCcEEEc
Q 007438 540 KMVWAKGYRELIDLLAKHKNDLD-GFKLDVFGNGEDAYEVQSAAKRLDLNLNFQ 592 (604)
Q Consensus 540 RLvwEKGfD~LLdl~~~v~~~~~-~~kLdIVGDGPDreeLk~~a~~LgL~V~Ft 592 (604)
+.+.+..|+.++.....-..... .-+++|+|.|+--=..=....+.|.+|..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vl 59 (370)
T d2iida1 6 ECFQENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVL 59 (370)
T ss_dssp GGGCCTTHHHHHHHHHHCSCCCSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEE
T ss_pred hhcCCccHHHHHHHHhcCCCCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 45667789999887644322222 248999999998766666666678877655
Done!