Query 007440
Match_columns 603
No_of_seqs 227 out of 1272
Neff 5.1
Searched_HMMs 29240
Date Tue Mar 26 01:52:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007440.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007440hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r99_A Peptidyl-prolyl CIS-tra 100.0 8.2E-36 2.8E-40 286.5 16.0 127 2-129 41-173 (173)
2 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.2E-35 4.1E-40 283.3 16.1 127 2-129 33-165 (165)
3 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.1E-35 3.9E-40 285.3 15.6 127 2-129 40-172 (172)
4 1qng_A Peptidyl-prolyl CIS-tra 100.0 7.2E-36 2.5E-40 286.1 14.1 126 2-128 33-170 (170)
5 2igv_A Peptidyl-prolyl CIS-tra 100.0 9.4E-36 3.2E-40 286.0 14.9 127 2-129 33-172 (173)
6 1a58_A Cyclophilin; isomerase, 100.0 1.5E-35 5.3E-40 285.5 16.0 127 2-129 36-177 (177)
7 2wfi_A Peptidyl-prolyl CIS-tra 100.0 1.6E-35 5.6E-40 285.8 16.0 126 2-128 39-179 (179)
8 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.1E-35 3.9E-40 286.4 14.2 126 2-128 40-177 (177)
9 3pmp_A Cyclophilin A; peptidyl 100.0 3E-35 1E-39 280.1 16.0 127 2-129 32-164 (164)
10 2he9_A NK-tumor recognition pr 100.0 3.4E-35 1.2E-39 286.5 16.0 127 2-129 49-190 (192)
11 2poy_A Peptidyl-prolyl CIS-tra 100.0 3.7E-35 1.3E-39 284.9 14.6 125 2-127 49-186 (186)
12 2haq_A Cyclophilin; rotamase, 100.0 4.5E-35 1.5E-39 281.2 14.1 125 2-128 41-172 (172)
13 1zkc_A Peptidyl-prolyl CIS-tra 100.0 9.5E-35 3.3E-39 284.3 16.3 130 2-133 44-179 (197)
14 3rdd_A Peptidyl-prolyl CIS-tra 100.0 9.5E-35 3.2E-39 281.6 14.8 127 2-129 52-184 (184)
15 2poe_A Cyclophilin-like protei 100.0 9.9E-35 3.4E-39 281.7 14.9 129 2-132 41-178 (185)
16 3bo7_A Peptidyl-prolyl CIS-tra 100.0 7.9E-35 2.7E-39 285.7 14.0 130 2-133 31-177 (201)
17 3ich_A Peptidyl-prolyl CIS-tra 100.0 1E-34 3.5E-39 282.3 14.6 127 2-129 45-178 (188)
18 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.2E-34 3.9E-39 275.4 14.1 129 2-132 25-159 (161)
19 2b71_A Cyclophilin-like protei 100.0 2.1E-34 7E-39 281.8 14.3 128 2-131 63-195 (196)
20 3k2c_A Peptidyl-prolyl CIS-tra 100.0 3.8E-34 1.3E-38 279.3 16.1 127 2-129 57-191 (193)
21 4fru_A Cyclophilin B, peptidyl 100.0 2.7E-34 9.2E-39 278.5 14.6 128 2-130 42-176 (185)
22 2fu0_A Cyclophilin, putative; 100.0 2.5E-34 8.5E-39 273.0 13.6 125 2-128 30-159 (160)
23 2x7k_A Peptidyl-prolyl CIS-tra 100.0 2.7E-34 9.1E-39 274.3 13.7 125 2-128 36-165 (166)
24 1z81_A Cyclophilin; structural 100.0 2E-34 7E-39 287.7 13.2 126 2-128 89-229 (229)
25 2c3b_A Ppiase, cyclophilin; is 100.0 4.2E-35 1.4E-39 281.3 7.1 126 2-128 37-172 (172)
26 2a2n_A Peptidylprolyl isomeras 100.0 6.6E-34 2.2E-38 274.0 13.8 124 2-127 46-175 (176)
27 2k7n_A Peptidyl-prolyl CIS-tra 100.0 7.9E-34 2.7E-38 278.9 12.8 129 2-132 36-169 (203)
28 2ose_A Probable peptidyl-proly 100.0 2E-33 6.9E-38 281.5 12.6 128 2-132 44-210 (234)
29 1ihg_A Cyclophilin 40; ppiase 100.0 1.2E-32 4.1E-37 288.8 14.6 129 2-131 45-187 (370)
30 1w74_A Peptidyl-prolyl CIS-tra 100.0 1.5E-32 5E-37 267.8 13.9 122 2-128 48-191 (191)
31 2hq6_A Serologically defined c 100.0 2.3E-32 7.8E-37 265.2 11.8 128 2-132 49-183 (185)
32 3bkp_A Cyclophilin; malaria, i 100.0 4.8E-32 1.6E-36 271.2 12.1 128 2-132 46-196 (232)
33 1lop_A Cyclophilin A; rotamase 100.0 3.5E-32 1.2E-36 259.0 10.2 123 2-128 24-163 (164)
34 1v9t_A Cyclophilin B; beta bar 100.0 2.3E-31 8E-36 253.8 11.6 123 2-128 29-165 (166)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 4.3E-31 1.5E-35 252.0 10.9 123 2-128 28-167 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 99.9 3.3E-27 1.1E-31 249.5 2.5 115 2-124 203-355 (369)
37 1zx8_A Hypothetical protein TM 33.4 21 0.00071 32.7 2.5 45 57-106 73-123 (136)
No 1
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=8.2e-36 Score=286.47 Aligned_cols=127 Identities=57% Similarity=0.952 Sum_probs=121.6
Q ss_pred hhhHHHhhh--cCc-eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCCCCCCce
Q 007440 2 SSFFFFSFT--VHL-FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQ 75 (603)
Q Consensus 2 ~slF~kL~~--~g~-Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~ns~GSQ 75 (603)
..+|++||+ .+| |+ |||||++ |||||||++.++|+||.+|||..|++|++.++|+.+|+|+||+.++|+++||
T Consensus 41 ~~NF~~L~~g~~g~~Y~g~~FhRvi~~-f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQ 119 (173)
T 2r99_A 41 AENFRCLCTHEKGFGFKGSSFHRIIPQ-FMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQ 119 (173)
T ss_dssp HHHHHHHHHTTTSCCSTTCBEEEEETT-TEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSC
T ss_pred HHHHHHHhcccCCceecCCEEEEeeCC-CEEEeCCcCCCCCCCCCccCCCcccCcccCcccCCCcEEEEccCCCCCcccE
Confidence 468999995 677 88 9999999 9999999988999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCCCCCCCCeEEeeeeecc
Q 007440 76 FFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEFS 129 (603)
Q Consensus 76 FFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~grP~~~I~I~~cGvl~ 129 (603)
|||||.+++|||++|||||+||+|||||++|+.+++.+++|+.+|+|.+||+|.
T Consensus 120 FfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~cG~l~ 173 (173)
T 2r99_A 120 FFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIIADCGEYV 173 (173)
T ss_dssp EEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEEEEECC
T ss_pred EEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCCeEEEEeeeEC
Confidence 999999999999999999999999999999999999989999999999999984
No 2
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.2e-35 Score=283.27 Aligned_cols=127 Identities=51% Similarity=0.895 Sum_probs=122.3
Q ss_pred hhhHHHhhh--cCc-eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCCCCCCce
Q 007440 2 SSFFFFSFT--VHL-FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQ 75 (603)
Q Consensus 2 ~slF~kL~~--~g~-Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~ns~GSQ 75 (603)
+.+|++||+ .+| |+ |||||++ |||||||++.++|+||++|||..|++|++.+.|+.+|+|+||+.++++++||
T Consensus 33 ~~NF~~L~~g~~g~~Y~g~~fhRvi~~-f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQ 111 (165)
T 2z6w_A 33 AENFRALCTGEKGFGYKGSTFHRVIPS-FMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQ 111 (165)
T ss_dssp HHHHHHHHHTTTSCCSTTCBEEEEETT-TEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSC
T ss_pred HHHHHHHhccCCCccCcCCEEEEEECC-CEEEeCCccCCCCCCCCcccCCcccCcccccccCCCCEEEEeeCCCCCcccE
Confidence 468999999 999 99 9999999 9999999988999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCCCCCCCCeEEeeeeecc
Q 007440 76 FFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEFS 129 (603)
Q Consensus 76 FFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~grP~~~I~I~~cGvl~ 129 (603)
|||||.+++|||++|||||+||+|||||++|+.+++.+++|..+|+|.+||+|.
T Consensus 112 FfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~~g~l~ 165 (165)
T 2z6w_A 112 FFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVITDCGQLS 165 (165)
T ss_dssp EEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSSCEEEEEEEECC
T ss_pred EEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCcEEEEEeEEEC
Confidence 999999999999999999999999999999999998889999999999999973
No 3
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.1e-35 Score=285.28 Aligned_cols=127 Identities=57% Similarity=0.896 Sum_probs=121.6
Q ss_pred hhhHHHhhhc--Cc-eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCCCCCCce
Q 007440 2 SSFFFFSFTV--HL-FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQ 75 (603)
Q Consensus 2 ~slF~kL~~~--g~-Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~ns~GSQ 75 (603)
..+|++||+. +| |+ |||||++ |||||||++.++|+||++|||..|++|++.+.|+.+|+|+||+.++|+++||
T Consensus 40 ~~NF~~L~~~~~g~~Y~g~~FhRvi~~-f~iQgGd~~~~~G~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQ 118 (172)
T 2cmt_A 40 AENFRALCTGERGFGYHNCCFHRVIPQ-FMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQ 118 (172)
T ss_dssp HHHHHHHHHTTTSCSSTTCBEEEEETT-TEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSC
T ss_pred HHHHHHHhccCCCceECCCEEEEEECC-CEEEcCCccCCCCCCCCccCCCcccccccCcccCCceEEEEeeCCCCCcccE
Confidence 4689999984 77 88 9999999 9999999988999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCCCCCCCCeEEeeeeecc
Q 007440 76 FFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEFS 129 (603)
Q Consensus 76 FFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~grP~~~I~I~~cGvl~ 129 (603)
|||||.+++|||++|||||+||+|||||++|+.+++.+++|+.+|+|.+||+|.
T Consensus 119 FfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 119 FFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVIISRCGELI 172 (172)
T ss_dssp EEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCCCSSCEEEEEEEEEC
T ss_pred EEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCCEEEEEeEeEC
Confidence 999999999999999999999999999999999999999999999999999973
No 4
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=7.2e-36 Score=286.06 Aligned_cols=126 Identities=52% Similarity=0.879 Sum_probs=121.1
Q ss_pred hhhHHHhhh-cCc--------eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCC
Q 007440 2 SSFFFFSFT-VHL--------FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGA 69 (603)
Q Consensus 2 ~slF~kL~~-~g~--------Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~ 69 (603)
..+|++||+ .+| |+ |||||++ |||||||++.++|+|+++|||..|++|++.++|+.+|+|+||+.++
T Consensus 33 ~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~-f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp 111 (170)
T 1qng_A 33 CENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQ-FMCQGGDITNGNGSGGESIYGRSFTDENFNMKHDQPGLLSMANAGP 111 (170)
T ss_dssp HHHHHHHHHTCEECTTSSEECCTTCBCCEEETT-TEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSST
T ss_pred HHHHHHHhccCCcCccCccceECCCEEEEEECC-CEEEcCCccCCCCCCCccccCCcccccccccccCCCCEEEEeecCC
Confidence 468999998 477 88 9999999 9999999988999999999999999999999999999999999999
Q ss_pred CCCCceEEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCCCCCCCCeEEeeeeec
Q 007440 70 NTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEF 128 (603)
Q Consensus 70 ns~GSQFFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~grP~~~I~I~~cGvl 128 (603)
|+++|||||||.+++|||++|||||+||+|||||++|+.+++.+++|..+|+|.+||+|
T Consensus 112 ~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~v~I~~cG~l 170 (170)
T 1qng_A 112 NTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVKRSVVITDCGEL 170 (170)
T ss_dssp TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEEEEEC
T ss_pred CCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCCCCeEEEeceeC
Confidence 99999999999999999999999999999999999999999988999999999999986
No 5
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=9.4e-36 Score=286.01 Aligned_cols=127 Identities=56% Similarity=0.935 Sum_probs=121.7
Q ss_pred hhhHHHhhhc--C--------ceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccC
Q 007440 2 SSFFFFSFTV--H--------LFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSG 68 (603)
Q Consensus 2 ~slF~kL~~~--g--------~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g 68 (603)
..+|++||+. + ||+ |||||++ |||||||++.++|+||++|||..|+||++.++|+.+|+|+||+.+
T Consensus 33 ~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~-f~iQgGd~~~~~G~gg~siyg~~f~dE~~~l~h~~~G~lsmAn~g 111 (173)
T 2igv_A 33 AGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPN-FMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAG 111 (173)
T ss_dssp HHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETT-TEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSS
T ss_pred HHHHHHHhcCCCCCCccCccceECCCEEEEEECC-CEEEcCCCCCCCCCCCCccCCCcccCcccccCCCCCeEEEEeeCC
Confidence 4689999986 4 688 9999999 999999998899999999999999999999999999999999999
Q ss_pred CCCCCceEEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCCCCCCCCeEEeeeeecc
Q 007440 69 ANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEFS 129 (603)
Q Consensus 69 ~ns~GSQFFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~grP~~~I~I~~cGvl~ 129 (603)
+|+++|||||||.+++|||++|||||+||+|||||++|+.+++.+++|+.+|+|.+||+|.
T Consensus 112 p~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~v~I~~~g~l~ 172 (173)
T 2igv_A 112 PNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIADCGQLK 172 (173)
T ss_dssp TTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSCEEEEEEEEEC
T ss_pred CCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCCEEEEEeEEEc
Confidence 9999999999999999999999999999999999999999999989999999999999984
No 6
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.5e-35 Score=285.47 Aligned_cols=127 Identities=50% Similarity=0.845 Sum_probs=120.8
Q ss_pred hhhHHHhhhc--------C---ceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEeccc
Q 007440 2 SSFFFFSFTV--------H---LFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANS 67 (603)
Q Consensus 2 ~slF~kL~~~--------g---~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~ 67 (603)
..+|++||+. + ||+ |||||++ |||||||++.++|+||++|||..|+||++.++|+.+|+|+||+.
T Consensus 36 ~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~-f~iQgGd~~~~~g~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~ 114 (177)
T 1a58_A 36 CNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKN-FMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANK 114 (177)
T ss_dssp HHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETT-TEEEECCCSSSSSSCCCCTTSSCBCCCCCCSCCCSSSEEEECCS
T ss_pred HHHHHHHhcCCcCcccccCCcceeCCCEEEEEECC-CEEEeCCccCCCCCCCCcccCCcccCcccCcccCCCeEEEEeeC
Confidence 4689999984 3 888 9999999 99999999889999999999999999999999999999999999
Q ss_pred CCCCCCceEEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC-CCCCCCCeEEeeeeecc
Q 007440 68 GANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVKIIDCGEFS 129 (603)
Q Consensus 68 g~ns~GSQFFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~-~grP~~~I~I~~cGvl~ 129 (603)
++|+++|||||||.+++|||++|||||+||+|||||++|+.++++ +++|+.+|+|.+||+|.
T Consensus 115 gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 115 GPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGELV 177 (177)
T ss_dssp STTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEC
T ss_pred CCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCCCCeEEEEeEEEC
Confidence 999999999999999999999999999999999999999999987 58999999999999984
No 7
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=1.6e-35 Score=285.80 Aligned_cols=126 Identities=50% Similarity=0.835 Sum_probs=120.6
Q ss_pred hhhHHHhhh-----------cCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEeccc
Q 007440 2 SSFFFFSFT-----------VHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANS 67 (603)
Q Consensus 2 ~slF~kL~~-----------~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~ 67 (603)
..+|++||+ .+||+ |||||++ |||||||++.++|+|+++|||..|+||++.++|+.+|+|+||+.
T Consensus 39 ~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~-f~iQgGd~~~~~g~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~ 117 (179)
T 2wfi_A 39 CENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKD-FMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANR 117 (179)
T ss_dssp HHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETT-TEEEECCTTTSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCS
T ss_pred HHHHHHHhcCCcCcccccccCCeECCCEEEEEECC-CEEEcccccCCCCCCCCcccCCcccccccCcCcCCCeEEEEEeC
Confidence 468999996 67899 9999999 99999999889999999999999999999999999999999999
Q ss_pred CCCCCCceEEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC-CCCCCCCeEEeeeeec
Q 007440 68 GANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVKIIDCGEF 128 (603)
Q Consensus 68 g~ns~GSQFFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~-~grP~~~I~I~~cGvl 128 (603)
++|+++|||||||.+++|||++|||||+||+|||||++|+.++++ +++|+.+|+|.+||+|
T Consensus 118 gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 118 GKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGEL 179 (179)
T ss_dssp STTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCBSSCEEEEEEEEC
T ss_pred CCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCCCCCeEEEeCeeC
Confidence 999999999999999999999999999999999999999999987 5899999999999986
No 8
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.1e-35 Score=286.44 Aligned_cols=126 Identities=54% Similarity=0.901 Sum_probs=121.3
Q ss_pred hhhHHHhhhcCc--------eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCCC
Q 007440 2 SSFFFFSFTVHL--------FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGAN 70 (603)
Q Consensus 2 ~slF~kL~~~g~--------Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~n 70 (603)
..+|++||+.+| |+ |||||++ |||||||++.++|+|+++|||..|++|++.++|+.+|+|+||+.++|
T Consensus 40 ~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~-f~iQgGd~~~~~G~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~ 118 (177)
T 1mzw_A 40 AENFRQFCTGEFRKDGVPIGYKGSTFHRVIKD-FMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPS 118 (177)
T ss_dssp HHHHHHHHHTCCEETTEECSSTTCBCCEEETT-TEEEECCTTTSSSCCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTT
T ss_pred HHHHHHHHhcccCCcCccceECCCEEEEEECC-CEEEcCCcccCCCCCCCccCCCcccCcccccccCCCCEEEEccCCCC
Confidence 468999999998 88 9999999 99999999889999999999999999999999999999999999999
Q ss_pred CCCceEEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC-CCCCCCCeEEeeeeec
Q 007440 71 TNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVKIIDCGEF 128 (603)
Q Consensus 71 s~GSQFFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~-~grP~~~I~I~~cGvl 128 (603)
+++|||||||.+++|||++|||||+||+|||||++|+.++++ +++|..+|+|.+||+|
T Consensus 119 tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 119 TNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177 (177)
T ss_dssp CBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred CcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCCCEEEEeceeC
Confidence 999999999999999999999999999999999999999995 7899999999999986
No 9
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=3e-35 Score=280.12 Aligned_cols=127 Identities=54% Similarity=0.902 Sum_probs=122.2
Q ss_pred hhhHHHhhh--cCc-eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCCCCCCce
Q 007440 2 SSFFFFSFT--VHL-FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQ 75 (603)
Q Consensus 2 ~slF~kL~~--~g~-Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~ns~GSQ 75 (603)
..+|++||+ .+| |+ |||||++ |||||||++.++|.|+.++||..|++|++.++|+.+|+|+||+.++++++||
T Consensus 32 ~~nF~~L~~g~~g~~Y~g~~fhRvi~~-f~iQgGd~~~~~g~gg~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQ 110 (164)
T 3pmp_A 32 AKNFRELATGQHGFGYKDSIFHRVIPQ-FMLQGGDFTRHNGTGGKSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQ 110 (164)
T ss_dssp HHHHHHHHHTTTSCSSTTCBEEEEETT-TEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSC
T ss_pred HHHHHHHhcccCCCcccCCEEEEEECC-CeEEeCCCCCCCCCCCcccCCccccccccccCcCCCcEEEEeeCCCCCcccE
Confidence 468999999 888 99 9999999 9999999888999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCCCCCCCCeEEeeeeecc
Q 007440 76 FFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEFS 129 (603)
Q Consensus 76 FFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~grP~~~I~I~~cGvl~ 129 (603)
|||||.+++|||++|||||+||+|||||++|+.+++.+++|..+|+|.+||+|.
T Consensus 111 FfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P~~~v~I~~cg~l~ 164 (164)
T 3pmp_A 111 FFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKTNATIKITDCGTVA 164 (164)
T ss_dssp EEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEEEEEC-
T ss_pred EEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCcccCEEEEeCeEEC
Confidence 999999999999999999999999999999999999999999999999999973
No 10
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-35 Score=286.51 Aligned_cols=127 Identities=48% Similarity=0.849 Sum_probs=121.4
Q ss_pred hhhHHHhhh-----------cCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEeccc
Q 007440 2 SSFFFFSFT-----------VHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANS 67 (603)
Q Consensus 2 ~slF~kL~~-----------~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~ 67 (603)
+.+|++||+ .+||+ |||||++ |||||||++.++|+||++|||..|+||++.++|+.+|+|+||+.
T Consensus 49 ~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~-fmiQgGd~~~~~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~ 127 (192)
T 2he9_A 49 CKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKN-FMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANR 127 (192)
T ss_dssp HHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETT-TEEEECCTTTSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCS
T ss_pred HHHHHHHhcCCCCcccccccCCeECCCEEEEEECC-CEEEcCcccCCCCCCCCcccCCcccCccccCCCCCCeEEEEEeC
Confidence 468999995 57899 9999999 99999999889999999999999999999999999999999999
Q ss_pred CCCCCCceEEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC-CCCCCCCeEEeeeeecc
Q 007440 68 GANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVKIIDCGEFS 129 (603)
Q Consensus 68 g~ns~GSQFFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~-~grP~~~I~I~~cGvl~ 129 (603)
++|+++|||||||.+++|||++|||||+||+|||||++|+.++++ +++|+.+|+|.+|++|.
T Consensus 128 gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~g~l~ 190 (192)
T 2he9_A 128 GKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLA 190 (192)
T ss_dssp STTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEECC
T ss_pred CCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCCCcCCeEEEEeEEEc
Confidence 999999999999999999999999999999999999999999987 58999999999999985
No 11
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=3.7e-35 Score=284.92 Aligned_cols=125 Identities=54% Similarity=0.859 Sum_probs=119.1
Q ss_pred hhhHHHhhh--cCc--------eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccC
Q 007440 2 SSFFFFSFT--VHL--------FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSG 68 (603)
Q Consensus 2 ~slF~kL~~--~g~--------Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g 68 (603)
+.+|++||+ .+| |+ |||||++ |||||||++.++|+|+++|||..|+||++.++|+.+|+|+||+.+
T Consensus 49 ~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~-f~iQgGd~~~~~G~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~g 127 (186)
T 2poy_A 49 AENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQ-FMIQGGDFTRGDGTGGESIYGSKFRDENFVYTHDAPFLLSMANAG 127 (186)
T ss_dssp HHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETT-TEEEECCTTTSSSSCCCCTTC-CBCCCCCCSCCCSTTEEEECCSS
T ss_pred HHHHHHHhcccCCccccCccceECCCEEEEEeCC-CEEEeCCCCCCCCCCCCccCCCcccCcccccccCCCcEEEEeeCC
Confidence 468999996 578 88 9999999 999999998899999999999999999999999999999999999
Q ss_pred CCCCCceEEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCCCCCCCCeEEeeeee
Q 007440 69 ANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGE 127 (603)
Q Consensus 69 ~ns~GSQFFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~grP~~~I~I~~cGv 127 (603)
+|+++|||||||.+++|||++|||||+||+|||||++|+.+++.+++|+.+|+|.+||+
T Consensus 128 pntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~P~~~v~I~~cG~ 186 (186)
T 2poy_A 128 PNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNGKPTKSVCITASGV 186 (186)
T ss_dssp TTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSSCEEEEEEEC
T ss_pred CCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCCEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999985
No 12
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=4.5e-35 Score=281.21 Aligned_cols=125 Identities=50% Similarity=0.821 Sum_probs=119.6
Q ss_pred hhhHHHhh--hcCc-eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCCCCCCce
Q 007440 2 SSFFFFSF--TVHL-FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQ 75 (603)
Q Consensus 2 ~slF~kL~--~~g~-Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~ns~GSQ 75 (603)
+.+|++|| +.+| |+ |||||++ |||||||+..++|+||++|||..|++|++.+.|. +|+|+||+.++++++||
T Consensus 41 ~~NF~~L~~g~~g~~Y~g~~FhRvi~~-f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQ 118 (172)
T 2haq_A 41 TENFRQLCTGEHGFGYKDSIFHRVIQN-FMIQGGDFTNFDGTGGKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQ 118 (172)
T ss_dssp HHHHHHHHHTTTSCCSTTCBCCEEETT-TEEEECCTTTSSSSCCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSC
T ss_pred HHHHHHHhccCCCcccCCCEEEEEECC-CEEecCCccCCCCCCCccccCCcccCcCCCcccC-ceEEEEccCCCCCcccE
Confidence 46899999 7899 99 9999999 9999999888999999999999999999999999 99999999999999999
Q ss_pred EEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCC-CCCCCCeEEeeeeec
Q 007440 76 FFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD-GKPAQPVKIIDCGEF 128 (603)
Q Consensus 76 FFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~-grP~~~I~I~~cGvl 128 (603)
|||||.++++||++|||||+||+|||||++|+++++.. ++|+.+|+|.+||+|
T Consensus 119 FfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l 172 (172)
T 2haq_A 119 FFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPVKIVASGEL 172 (172)
T ss_dssp EEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred EEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCeEEEEeEEC
Confidence 99999999999999999999999999999999999984 599999999999986
No 13
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=9.5e-35 Score=284.32 Aligned_cols=130 Identities=43% Similarity=0.698 Sum_probs=123.0
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCC-CCCCCCCCCceEEecccCCCCCCceEE
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDE-NFKLDHNGPGILSMANSGANTNGSQFF 77 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE-~~~l~H~~~GlLsMA~~g~ns~GSQFF 77 (603)
..+|++||+.+||+ |||||++ |||||||++ ++|.||++|||..|++| ++.+.|+.+|+|+||+.++|+++||||
T Consensus 44 v~NF~~L~~~g~Ydg~~FhRVi~~-f~iQgGd~~-~~g~Gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFF 121 (197)
T 1zkc_A 44 CENFIRLCKKHYYDGTIFHRSIRN-FVIQGGDPT-GTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFF 121 (197)
T ss_dssp HHHHHHHHHTTTTTTEEEEEEETT-TEEEECCTT-SSSSCCCBTTBSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEE
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCC-CEEEcCCCC-CCCCCCCccCCCccccccCcCcCCCCceEEEEecCCCCCcccEEE
Confidence 46899999999999 9999999 999999984 88999999999999999 588999999999999999999999999
Q ss_pred EEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCC--CCCCCCeEEeeeeecccccc
Q 007440 78 ITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD--GKPAQPVKIIDCGEFSESKI 133 (603)
Q Consensus 78 ItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~--grP~~~I~I~~cGvl~d~k~ 133 (603)
|||.+++|||++|||||+||+|||||++|+.++++. ++|+.+|+|.+|+++.++..
T Consensus 122 It~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~~dPf~ 179 (197)
T 1zkc_A 122 ITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDPYE 179 (197)
T ss_dssp EESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEEEECTTH
T ss_pred EEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEEEcCCcc
Confidence 999999999999999999999999999999999874 89999999999999988743
No 14
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=9.5e-35 Score=281.62 Aligned_cols=127 Identities=54% Similarity=0.894 Sum_probs=121.3
Q ss_pred hhhHHHhhhcCc---eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCCCCCCce
Q 007440 2 SSFFFFSFTVHL---FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQ 75 (603)
Q Consensus 2 ~slF~kL~~~g~---Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~ns~GSQ 75 (603)
..+|++||+.++ |+ |||||++ |||||||++.++|.|+.+|||..|++|++.+.|+.+|+|+||+.++++++||
T Consensus 52 ~~NF~~L~~~~~g~~Y~g~~FhRvi~~-f~iQgGd~~~~~g~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQ 130 (184)
T 3rdd_A 52 AENFRALSTGEKGFGYKGSCFHRIIPG-FMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQ 130 (184)
T ss_dssp HHHHHHHHHTTTSCSSTTCBCCEEETT-TEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSC
T ss_pred HHHHHHHhccCcCcccCCCEEEEccCC-cEEEeCCCCCCCCCCCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccE
Confidence 468999996654 99 9999999 9999999989999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCCCCCCCCeEEeeeeecc
Q 007440 76 FFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEFS 129 (603)
Q Consensus 76 FFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~grP~~~I~I~~cGvl~ 129 (603)
|||||.++++||++|||||+||+|||||++|+++++.+++|..+|+|.+||+|.
T Consensus 131 FfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 131 FFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE 184 (184)
T ss_dssp EEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSCEEEEEEEECC
T ss_pred EEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCCCCcCCeEEEeCeEEC
Confidence 999999999999999999999999999999999999999999999999999983
No 15
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=9.9e-35 Score=281.74 Aligned_cols=129 Identities=39% Similarity=0.602 Sum_probs=122.1
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCC-CCCCCCCCceEEecccC----CCCCC
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDEN-FKLDHNGPGILSMANSG----ANTNG 73 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~-~~l~H~~~GlLsMA~~g----~ns~G 73 (603)
..+|++||+.+||+ |||||++ |||||||++ ++|+||++|||..|++|+ +.+.|+.+|+|+||+.+ +++++
T Consensus 41 ~~NF~~L~~~g~Y~g~~FhRvi~~-f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~g 118 (185)
T 2poe_A 41 CKNFLALSASGYYKNTIFHKNIKG-FIIQGGDPT-GTGKGGESIYGRYFDDEIYPELKYDRRGILSMASKGASKKPNTNG 118 (185)
T ss_dssp HHHHHHHHHTTTTTTEEEEEECTT-SEEEEEETT-SSSSCCCBTTBSCBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBC
T ss_pred HHHHHHHhccCCCCCCEEEEEECC-CEEEcCCCC-CCCCCCCccCCCcccccccCCCccCCCeEEEEecCCCCCCCCCcc
Confidence 46899999999999 9999999 999999985 889999999999999997 78999999999999998 99999
Q ss_pred ceEEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC-CCCCCCCeEEeeeeeccccc
Q 007440 74 SQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVKIIDCGEFSESK 132 (603)
Q Consensus 74 SQFFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~-~grP~~~I~I~~cGvl~d~k 132 (603)
|||||||.+++|||++|||||+||+|||||++|+.++++ +++|+.+|+|.+|+++.++.
T Consensus 119 SQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~i~~dPf 178 (185)
T 2poe_A 119 SQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVIHSNPI 178 (185)
T ss_dssp SCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEEEEECCC-
T ss_pred ceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEECCCC
Confidence 999999999999999999999999999999999999987 58999999999999998874
No 16
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=7.9e-35 Score=285.70 Aligned_cols=130 Identities=38% Similarity=0.588 Sum_probs=116.3
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeC-----CCCCCCCCCCCccC-------CCCCCCC-CCCCCCCCCceEEec
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGG-----DFSKGNGTGGESIY-------GGKFTDE-NFKLDHNGPGILSMA 65 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgG-----D~~~g~G~GG~Siy-------G~~f~dE-~~~l~H~~~GlLsMA 65 (603)
..+|++||..+||+ |||||++ |||||| |++ ++|.||++|| |..|++| ++.+.|+.+|+|+||
T Consensus 31 ~~NF~~L~~~g~Ydg~~FhRvi~~-f~iQgG~~~~~Dp~-~~g~gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA 108 (201)
T 3bo7_A 31 CDSFLRLCAVKYFDDTIFHRCIRN-FMIQGGRAELRQPS-KKKEVQQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMA 108 (201)
T ss_dssp HHHHHHHHHTTTTTTCBEEEEETT-TEEEECCGGGCCC--------CCSSCCCSSTTCCCBCCCCCTTCCCCSTTEEEEC
T ss_pred HHHHHHHHhcCccCCCEEEEeeCC-CEEEcCcccccCCC-CCCCCCccccccccccCCCcccCcccCCCCcCCCcEEEEe
Confidence 46899999999999 9999999 999999 984 8899999999 8999999 578899999999999
Q ss_pred ccCCCCCCceEEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC-CCCCCCCeEEeeeeecccccc
Q 007440 66 NSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVKIIDCGEFSESKI 133 (603)
Q Consensus 66 ~~g~ns~GSQFFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~-~grP~~~I~I~~cGvl~d~k~ 133 (603)
+.++|+++|||||||.+++|||++|||||+||+|||||++|+.+++. +++|+.+|+|.+|++|.++..
T Consensus 109 ~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~~~v~~dPf~ 177 (201)
T 3bo7_A 109 NDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPPKVEEIIVFKNPFE 177 (201)
T ss_dssp CSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSSCCBEEEEEEEECCC-
T ss_pred eCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEEcCCcc
Confidence 99999999999999999999999999999999999999999999987 589999999999999998743
No 17
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1e-34 Score=282.31 Aligned_cols=127 Identities=52% Similarity=0.901 Sum_probs=120.7
Q ss_pred hhhHHHhhh--cCc-eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCCCCCCce
Q 007440 2 SSFFFFSFT--VHL-FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQ 75 (603)
Q Consensus 2 ~slF~kL~~--~g~-Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~ns~GSQ 75 (603)
..+|++||+ .+| |+ |||||++ |||||||+..++|+||.+|||..|++|++.+.|+.+|+|+||+.++|+++||
T Consensus 45 ~~NF~~L~~g~~g~~Y~g~~FhRvi~~-f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQ 123 (188)
T 3ich_A 45 VDNFVALATGEKGFGYKNSKFHRVIKD-FMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQ 123 (188)
T ss_dssp HHHHHHHHHTTTSCSSTTCBCCEEETT-TEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSC
T ss_pred HHHHHHHhcccCCccccCCEEEEEECC-CEEEcCCccCCCCCCCccccCCcccccccCcccCCCeEEEEccCCCCCcccE
Confidence 468999995 788 98 9999999 9999999888999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC-CCCCCCCeEEeeeeecc
Q 007440 76 FFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVKIIDCGEFS 129 (603)
Q Consensus 76 FFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~-~grP~~~I~I~~cGvl~ 129 (603)
|||||.+++|||++|||||+||+|||||++|+.+++. +++|+.+|+|.+|++|.
T Consensus 124 FfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~~~~l~ 178 (188)
T 3ich_A 124 FFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIE 178 (188)
T ss_dssp EEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEE
T ss_pred EEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCEEEEEeEEEe
Confidence 9999999999999999999999999999999999988 45999999999999983
No 18
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.2e-34 Score=275.43 Aligned_cols=129 Identities=41% Similarity=0.635 Sum_probs=121.8
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCC-CCCCCCCceEEecccCCCCCCceEE
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFF 77 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~-~l~H~~~GlLsMA~~g~ns~GSQFF 77 (603)
+.+|++||+.+||+ |||||+| |||||||++ ++|.||++|||..|++|+. .+.|+.+|+|+||+.++++++||||
T Consensus 25 ~~NF~~L~~~g~Y~g~~fhRvi~~-f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsma~~gp~s~~SQFf 102 (161)
T 2ok3_A 25 CENFLALCASNYYNGCIFHRNIKG-FMVQTGDPT-GTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFF 102 (161)
T ss_dssp HHHHHHHHHTTTTTTCBCCEEETT-TEEEECCTT-SSSSCCCCTTSSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEE
T ss_pred HHHHHHHhhhcccCCCEEEEEECC-CEEecCCCC-CCCCCCCcccCCccccccCcCcCcCCCeEEEEecCCCCCcceEEE
Confidence 46899999999999 9999999 999999985 8899999999999999974 7899999999999999999999999
Q ss_pred EEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCC--CCCCCCeEEeeeeeccccc
Q 007440 78 ITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD--GKPAQPVKIIDCGEFSESK 132 (603)
Q Consensus 78 ItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~--grP~~~I~I~~cGvl~d~k 132 (603)
|||.+++|||++|||||+||+|||||++|+.+++.. ++|+.+|+|.+|.|+.++.
T Consensus 103 I~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~~~Pf 159 (161)
T 2ok3_A 103 ITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPF 159 (161)
T ss_dssp EESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEECCSC
T ss_pred EEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEecCCC
Confidence 999999999999999999999999999999999874 7999999999999998863
No 19
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.1e-34 Score=281.79 Aligned_cols=128 Identities=43% Similarity=0.709 Sum_probs=118.3
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCC-CCCCCCCCCceEEecccCCCCCCceEE
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDE-NFKLDHNGPGILSMANSGANTNGSQFF 77 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE-~~~l~H~~~GlLsMA~~g~ns~GSQFF 77 (603)
..+|++||+.+||+ |||||+| |||||||++ ++|.||++|||..|++| ++.+.|+.+|+|+||+.++|+++||||
T Consensus 63 v~NF~~L~~~g~Y~g~~FhRVi~~-f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFF 140 (196)
T 2b71_A 63 CLNFYTLCEMGFYDNTIFHRVIPN-FVIQGGDPT-GTGKGGKSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFF 140 (196)
T ss_dssp HHHHHHHHHTTTTTTEEEEEEETT-TEEEEEETT-SSSSCCCBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEE
T ss_pred HHHHHHHhhcCCcCCCEEEEEeCC-cEEEcCCCC-CCCCCCCccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEE
Confidence 46899999999999 9999999 999999985 88999999999999999 467899999999999999999999999
Q ss_pred EEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC-CCCCCCCeEEeeeeecccc
Q 007440 78 ITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVKIIDCGEFSES 131 (603)
Q Consensus 78 ItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~-~grP~~~I~I~~cGvl~d~ 131 (603)
|||.+++|||++|||||+||+|||||++|+.+++. +++|+.+|+|.+|.|+.++
T Consensus 141 It~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~~~i~~dP 195 (196)
T 2b71_A 141 ITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILRTSTAVNA 195 (196)
T ss_dssp EESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEEEEEC----
T ss_pred EECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEEEEEEecCC
Confidence 99999999999999999999999999999999987 5899999999999999875
No 20
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=3.8e-34 Score=279.28 Aligned_cols=127 Identities=50% Similarity=0.813 Sum_probs=122.1
Q ss_pred hhhHHHhhh--cCc-eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCCCCCCce
Q 007440 2 SSFFFFSFT--VHL-FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQ 75 (603)
Q Consensus 2 ~slF~kL~~--~g~-Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~ns~GSQ 75 (603)
..+|++||+ .+| |+ |||||++ |||||||+..++|.++.+|||..|++|++.++|+.+|+|+||+.++++++||
T Consensus 57 v~NF~~L~~g~~g~~Y~g~~FhRvi~~-f~iQgGd~~~~~g~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQ 135 (193)
T 3k2c_A 57 AKNFRTLCERPKGEGYKGSTFHRIIPG-FMVQGGDYTAHNGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQ 135 (193)
T ss_dssp HHHHHHHHHSCTTSSSTTCBEEEEETT-TEEEECCTTTSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSC
T ss_pred HHHHHHHhccccCCcccCCEEEEEeCC-CEEEeCCCCCCCCcCCcccCCCcccccccccccCCCcEEEEEeCCCCCCccE
Confidence 468999999 777 88 9999999 9999999989999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCCCCCC--CCeEEeeeeecc
Q 007440 76 FFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPA--QPVKIIDCGEFS 129 (603)
Q Consensus 76 FFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~grP~--~~I~I~~cGvl~ 129 (603)
|||||.++++||++|||||+||+|||||++|+++++.+++|. .+|+|.+||+|.
T Consensus 136 FFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~g~P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 136 FFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKKGYRIEIRDCGVLG 191 (193)
T ss_dssp EEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCCTTCCEEEEEEEECC
T ss_pred EEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCCCcCccCccEEEEEceEeC
Confidence 999999999999999999999999999999999999999999 999999999985
No 21
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.7e-34 Score=278.50 Aligned_cols=128 Identities=52% Similarity=0.874 Sum_probs=121.7
Q ss_pred hhhHHHhhhc--C-ceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCCCCCCce
Q 007440 2 SSFFFFSFTV--H-LFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQ 75 (603)
Q Consensus 2 ~slF~kL~~~--g-~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~ns~GSQ 75 (603)
..+|++||+. + +|+ |||||++ |||||||++.++|.|+.+|||..|++|++.++|+.+|+|+||+.++++++||
T Consensus 42 ~~NF~~L~~~~~g~~Y~g~~FhRvi~~-f~iQgGd~~~~~g~gg~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQ 120 (185)
T 4fru_A 42 VDNFVALATGEKGFGYKDSKFHRVIKD-FMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQ 120 (185)
T ss_dssp HHHHHHHHHTTTSCCSTTCBCCEEETT-TEEEECCTTTSSSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSC
T ss_pred HHHHHHHHhcCCCCeEcCCEEEEeeCC-CeEEECCCCCCCCCCCccccCCccCccccccCcCCCeEEEEeeCCCCCcceE
Confidence 4689999976 5 688 9999999 9999999988999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC-CCCCCCCeEEeeeeeccc
Q 007440 76 FFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVKIIDCGEFSE 130 (603)
Q Consensus 76 FFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~-~grP~~~I~I~~cGvl~d 130 (603)
|||||.+++|||++|||||+||+|||||++|+.+++. +++|+.+|+|.+||+|..
T Consensus 121 FfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l~~ 176 (185)
T 4fru_A 121 FFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDVTIADCGKIEV 176 (185)
T ss_dssp EEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEEE
T ss_pred EEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCEEEEEceEEec
Confidence 9999999999999999999999999999999999987 689999999999999854
No 22
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=2.5e-34 Score=273.02 Aligned_cols=125 Identities=46% Similarity=0.651 Sum_probs=119.0
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCC-CCCCCCCceEEecccCCCCCCceEE
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFF 77 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~-~l~H~~~GlLsMA~~g~ns~GSQFF 77 (603)
..+|++||+.+||+ |||||++ |||||||+ .++|+|+++|||..|++|++ .+.|+.+|+|+||+.++++++||||
T Consensus 30 ~~NF~~L~~~g~Y~g~~fhRvi~~-f~iQgGd~-~~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFf 107 (160)
T 2fu0_A 30 VQNFSVHSINGYYNNCIFHRVIKH-FMVQTGDP-SGDGTGGESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFF 107 (160)
T ss_dssp HHHHHHHHHTTTTTTCBCCEEETT-TEEEECCT-TSSSSCCCCTTSSCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEE
T ss_pred HHHHHHHhccCccCCCEEEEEECC-CEEEeCCc-CCCCCCCCcccCCCccccccCCcccCCceEEEEecCCCCCcccEEE
Confidence 46899999999999 9999999 99999998 58899999999999999987 6899999999999999999999999
Q ss_pred EEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC-CCCCCCCeEEeeeeec
Q 007440 78 ITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVKIIDCGEF 128 (603)
Q Consensus 78 ItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~-~grP~~~I~I~~cGvl 128 (603)
|||.+++|||++|||||+||+|||||++|+.+++. +++|+.+|+|.+|.++
T Consensus 108 I~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~ 159 (160)
T 2fu0_A 108 ITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKIN 159 (160)
T ss_dssp EESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEEC
T ss_pred EECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEe
Confidence 99999999999999999999999999999999987 6899999999999885
No 23
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=2.7e-34 Score=274.29 Aligned_cols=125 Identities=42% Similarity=0.707 Sum_probs=118.6
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCC-CCCCCCCCceEEecccCCCCCCceEE
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDEN-FKLDHNGPGILSMANSGANTNGSQFF 77 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~-~~l~H~~~GlLsMA~~g~ns~GSQFF 77 (603)
..+|++||+.+||+ |||||++ |||||||++ ++|.||++|||..|++|+ +.+.|..+|+|+||+.++|+++||||
T Consensus 36 ~~NF~~L~~~g~Y~g~~fhRvi~~-f~iQgGd~~-~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFf 113 (166)
T 2x7k_A 36 CKNFAELARRGYYNGTKFHRIIKD-FMIQGGDPT-GTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFF 113 (166)
T ss_dssp HHHHHHHHHHTTTTTEECCEEETT-TEEEECCTT-SSSSCCCCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEE
T ss_pred HHHHHHHHhcCCCCCCEEEEEECC-CEEEcCCCC-CCCCCCCccCCCccccccccccCCCCCeEEEEeeCCCCCccceEE
Confidence 46899999999999 9999999 999999984 889999999999999997 58899999999999999999999999
Q ss_pred EEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC-CCCCCCCeEEeeeeec
Q 007440 78 ITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVKIIDCGEF 128 (603)
Q Consensus 78 ItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~-~grP~~~I~I~~cGvl 128 (603)
|||.+++|||++|||||+||+|||||++|+.++++ +++|+.+|+|.+|.|+
T Consensus 114 I~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 114 VTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPS 165 (166)
T ss_dssp EESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEEEEEEC
T ss_pred EECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEe
Confidence 99999999999999999999999999999999987 4799999999999986
No 24
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2e-34 Score=287.67 Aligned_cols=126 Identities=48% Similarity=0.810 Sum_probs=120.9
Q ss_pred hhhHHHhhhcC--------ceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCCC
Q 007440 2 SSFFFFSFTVH--------LFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGAN 70 (603)
Q Consensus 2 ~slF~kL~~~g--------~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~n 70 (603)
..+|++||+.+ ||+ |||||++ |||||||++.++|+|+++|||..|++|++.++|+.+|+|+||+.++|
T Consensus 89 v~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~-FmiQgGD~~~g~G~Gg~siyg~~f~dE~~~l~h~~~G~LsMAn~gpn 167 (229)
T 1z81_A 89 SENFRQFCTGEYKVNNLPVGYKNTIFHRVIKE-FMIQGGDFINHNGSGSLSIYGEKFDDENFDIKHDKEGLLSMANSGPN 167 (229)
T ss_dssp HHHHHHHHHTCCBSSSSBCSSTTEECCEEETT-TEEEECCTTTSSSCCCCBTTBSCCCCCCCCSCCCSTTEEEECCSSSS
T ss_pred HHHHHHHhhCCCCCcCCCceECCCEEEEEeCC-CEEEcCCCcCCCCCCCCccCCCcccccccccccCCCcEEEeccCCCC
Confidence 46899999987 688 9999999 99999999889999999999999999999999999999999999999
Q ss_pred CCCceEEEEccCCCCCCCCCcEEEEEE--eCHHHHHHHHhcCCCC--CCCCCCeEEeeeeec
Q 007440 71 TNGSQFFITFRRQHHLDGKHVVFGKVV--KGLNIVKKIEQVGTGD--GKPAQPVKIIDCGEF 128 (603)
Q Consensus 71 s~GSQFFItL~~~p~LDGk~vVFGrVV--eGmEVL~kIe~v~t~~--grP~~~I~I~~cGvl 128 (603)
+++|||||||.+++|||++|||||+|| +|||||++|+.+++.. ++|+.+|+|.+||+|
T Consensus 168 tngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 168 TNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYKPKIPINVVECGEL 229 (229)
T ss_dssp CCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCCBSSCEEEEEEEEC
T ss_pred CcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCCCCCCeEEEeCeeC
Confidence 999999999999999999999999999 9999999999999985 899999999999986
No 25
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=4.2e-35 Score=281.28 Aligned_cols=126 Identities=52% Similarity=0.850 Sum_probs=90.6
Q ss_pred hhhHHHhhh--cCc-eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecccCCCCCCce
Q 007440 2 SSFFFFSFT--VHL-FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQ 75 (603)
Q Consensus 2 ~slF~kL~~--~g~-Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~g~ns~GSQ 75 (603)
..+|++||+ .+| |+ |||||++ |||||||+..++|+||++|||..|++|++.++|+.+|+|+||+.++|+++||
T Consensus 37 ~~NF~~L~~g~~g~~Y~g~~fhRvi~~-f~iQgGd~~~~~g~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQ 115 (172)
T 2c3b_A 37 AKNFRELCKRPAGEGYRESTFHRIIPN-FMIQGGDFTRGNGTGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQ 115 (172)
T ss_dssp HHHHHHHHHSCTTTSSTTCBCCEEETT-TEEEECC----------------------CHHHHHTCEEEEC---------C
T ss_pred HHHHHHHhccCCCcccCCCEEEEEeCC-CEEEeCCcCCCCCCCCcccCCCcccCcccccccCCCeEEEEeeCCCCCcccE
Confidence 468999999 778 88 9999999 9999999878999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCcEEEEEEe--CHHHHHHHHhcCCCCC--CCCCCeEEeeeeec
Q 007440 76 FFITFRRQHHLDGKHVVFGKVVK--GLNIVKKIEQVGTGDG--KPAQPVKIIDCGEF 128 (603)
Q Consensus 76 FFItL~~~p~LDGk~vVFGrVVe--GmEVL~kIe~v~t~~g--rP~~~I~I~~cGvl 128 (603)
|||||.+++|||++|||||+||+ |||||++|+++++..+ +|..+|+|.+||+|
T Consensus 116 FfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 116 FFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp EEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCSSSCCEEEEEEEC
T ss_pred EEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccCCCCeEEEeCeeC
Confidence 99999999999999999999999 9999999999999865 99999999999986
No 26
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=6.6e-34 Score=274.01 Aligned_cols=124 Identities=45% Similarity=0.697 Sum_probs=118.0
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCC-CCCCCCCceEEecccCCCCCCceEE
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFF 77 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~-~l~H~~~GlLsMA~~g~ns~GSQFF 77 (603)
..+|++||+.+||+ |||||++ |||||||+ .++|+|+++|||..|++|++ .+.|+.+|+|+||+.++|+++||||
T Consensus 46 ~~NF~~L~~~g~Y~g~~FhRvi~~-f~iQgGd~-~~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFF 123 (176)
T 2a2n_A 46 VENFCVHSRNGYYNGHTFHRIIKG-FMIQTGDP-TGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFF 123 (176)
T ss_dssp HHHHHHHHHTTTTTTCBCCEEETT-TEEEECCT-TSSSSCCCCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEE
T ss_pred HHHHHHHhhcCccCCCEEEEEECC-cEEEccCC-CCCCCCCCcccCCccccccccccccCCceEEEEEeCCCCCcccEEE
Confidence 36899999999999 9999999 99999998 58899999999999999987 6899999999999999999999999
Q ss_pred EEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC--CCCCCCCeEEeeeee
Q 007440 78 ITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG--DGKPAQPVKIIDCGE 127 (603)
Q Consensus 78 ItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~--~grP~~~I~I~~cGv 127 (603)
|||.+++|||++|||||+||+|||||++|+.+++. +++|+.+|+|.+|.|
T Consensus 124 It~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 124 ITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp EESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred EECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 99999999999999999999999999999999987 789999999999976
No 27
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=7.9e-34 Score=278.92 Aligned_cols=129 Identities=41% Similarity=0.683 Sum_probs=121.7
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCC-CCCCCCCCceEEecccCCCCCCceEE
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDEN-FKLDHNGPGILSMANSGANTNGSQFF 77 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~-~~l~H~~~GlLsMA~~g~ns~GSQFF 77 (603)
..+|++||+.+||+ |||||++ |||||||++ ++|.++++|||..|++|+ +.++|..+|+|+||+.++|++++|||
T Consensus 36 v~NF~~L~~~g~Ydg~~FhRVi~~-F~iQgGd~~-~~g~gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFF 113 (203)
T 2k7n_A 36 CKNFAELARRGYYNGTKFHRIIKD-FMIQGGDPT-GTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFF 113 (203)
T ss_dssp HHHHHHHHHHTCGGGCEEEEEETT-TEEEEECSS-SSSSCCCTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEE
T ss_pred HHHHHHHHhcCccCCCEEEEEeCC-cEEEcCCCC-CCCCCCCccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEE
Confidence 46899999999999 9999999 999999984 889999999999999997 58899999999999999999999999
Q ss_pred EEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCC-CCCCCCCeEEeeeeeccccc
Q 007440 78 ITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPAQPVKIIDCGEFSESK 132 (603)
Q Consensus 78 ItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~-~grP~~~I~I~~cGvl~d~k 132 (603)
|||.+++|||++|||||+||+|||||++|+.++++ +++|+.+|+|.+|+|+..++
T Consensus 114 It~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~~~~v~~~~~ 169 (203)
T 2k7n_A 114 VTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSGGGG 169 (203)
T ss_dssp EESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEEEEEECCCCC
T ss_pred EEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEEecCC
Confidence 99999999999999999999999999999999987 57999999999999998763
No 28
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=2e-33 Score=281.52 Aligned_cols=128 Identities=26% Similarity=0.450 Sum_probs=114.6
Q ss_pred hhhHHHhhhc-----------------C--c-eE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCC-----CCCCCCC
Q 007440 2 SSFFFFSFTV-----------------H--L-FD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGK-----FTDENFK 53 (603)
Q Consensus 2 ~slF~kL~~~-----------------g--~-Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~-----f~dE~~~ 53 (603)
..+|++||+. + | |+ |||||++ |||||||+..++|+||++|||.. |+ ++.
T Consensus 44 v~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~-FmiQgGd~~~g~G~Gg~siyg~~~~p~~f~--~~~ 120 (234)
T 2ose_A 44 VENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHN-NYIVSGDIYNSNGSSAGTVYCDEPIPPVFG--DYF 120 (234)
T ss_dssp HHHHHHHHHTCCCC---------------CCCSTTCBCCEEETT-TEEEECCCC----CCCCCTTTTCCBCCCCC--SCC
T ss_pred HHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECC-CEEEcCCccCCCCCCCccccCCccCccccc--CcC
Confidence 4689999994 4 6 88 9999999 99999998889999999999987 66 568
Q ss_pred CCCCCCceEEecc----cCCCCCCceEEEEccC------CCCCCCCCcEEEEEEeCHHHHHHHHhcCCCC-CCCCCCeEE
Q 007440 54 LDHNGPGILSMAN----SGANTNGSQFFITFRR------QHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD-GKPAQPVKI 122 (603)
Q Consensus 54 l~H~~~GlLsMA~----~g~ns~GSQFFItL~~------~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~-grP~~~I~I 122 (603)
+.|+.+|+|+||+ .++++++|||||||.+ ++||||+|||||+||+|||||++|+.+++.. ++|+.+|+|
T Consensus 121 l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I 200 (234)
T 2ose_A 121 YPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLDKINSMIKPYAGRKYPTFSI 200 (234)
T ss_dssp CCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHHHHHHHHHHTCCCTTCCCCCEEE
T ss_pred ccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCccCCEEE
Confidence 9999999999999 8999999999999999 9999999999999999999999999999984 899999999
Q ss_pred eeeeeccccc
Q 007440 123 IDCGEFSESK 132 (603)
Q Consensus 123 ~~cGvl~d~k 132 (603)
.+|++|.++.
T Consensus 201 ~~~~~l~~p~ 210 (234)
T 2ose_A 201 GKCGAYLDSS 210 (234)
T ss_dssp EEEEECCCHH
T ss_pred EEEEEecCCc
Confidence 9999998763
No 29
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.98 E-value=1.2e-32 Score=288.78 Aligned_cols=129 Identities=54% Similarity=0.846 Sum_probs=123.0
Q ss_pred hhhHHHhhhc--------C---ceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEeccc
Q 007440 2 SSFFFFSFTV--------H---LFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANS 67 (603)
Q Consensus 2 ~slF~kL~~~--------g---~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~ 67 (603)
..+|++||+. | ||+ |||||+| |||||||++.++|+||++|||..|++|++.++|+.+|+|+||+.
T Consensus 45 ~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~-f~~q~Gd~~~~~g~g~~~~~~~~~~~e~~~~~~~~~g~l~ma~~ 123 (370)
T 1ihg_A 45 AENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKK-FMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANA 123 (370)
T ss_dssp HHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETT-TEEEECCTTTSSSSCCCBTTBSCBCCCCCCBCCCSTTEEEECCS
T ss_pred HHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECC-cEEECCCCCCCCCCCCCCCCCCCcCCCcCCcCCCCCeEEEEeeC
Confidence 4689999998 5 688 9999999 99999999889999999999999999999999999999999999
Q ss_pred CCCCCCceEEEEccCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCCCCCCCCeEEeeeeecccc
Q 007440 68 GANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIIDCGEFSES 131 (603)
Q Consensus 68 g~ns~GSQFFItL~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~grP~~~I~I~~cGvl~d~ 131 (603)
++|++||||||||.+++||||+|||||+||+||+||++|+.+++..++|..+|+|..|+++.+.
T Consensus 124 ~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~~v~I~~~g~l~~~ 187 (370)
T 1ihg_A 124 GSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKLCVIAECGELKEG 187 (370)
T ss_dssp STTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESSCEEEEEEEEECTT
T ss_pred CCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCCCccceeEEEEEEEEeccC
Confidence 9999999999999999999999999999999999999999998887899999999999999764
No 30
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=99.98 E-value=1.5e-32 Score=267.77 Aligned_cols=122 Identities=39% Similarity=0.624 Sum_probs=113.2
Q ss_pred hhhHHHhh---------------hcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCC-CCCCCCCCCceE
Q 007440 2 SSFFFFSF---------------TVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDE-NFKLDHNGPGIL 62 (603)
Q Consensus 2 ~slF~kL~---------------~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE-~~~l~H~~~GlL 62 (603)
..+|++|| ..+||+ |||||++ |||||||+ .++|+|| ||..|++| ++.++|+.+|+|
T Consensus 48 v~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~-fmiQgGd~-~g~G~gg---~g~~f~dE~~~~l~h~~~G~l 122 (191)
T 1w74_A 48 VANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQG-FMIQGGDP-TGTGRGG---PGYKFADEFHPELQFDKPYLL 122 (191)
T ss_dssp HHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETT-TEEEECCT-TSSSSCC---SSCCBCCCCCTTCCSCSSSEE
T ss_pred HHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCC-CEEecCCC-CCCCCCC---CCCccccccccCCCcCCCcEE
Confidence 46899999 458999 9999999 99999997 5788887 58889999 578999999999
Q ss_pred EecccCCCCCCceEEEEccCCCCCCCCCcEEEEEEe--CHHHHHHHHhcCCC-CCCCCCCeEEeeeeec
Q 007440 63 SMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVK--GLNIVKKIEQVGTG-DGKPAQPVKIIDCGEF 128 (603)
Q Consensus 63 sMA~~g~ns~GSQFFItL~~~p~LDGk~vVFGrVVe--GmEVL~kIe~v~t~-~grP~~~I~I~~cGvl 128 (603)
+||+.++|+++|||||||.+++|||++|||||+||+ |||||++|+.++++ +++|+.+|+|.+|+|+
T Consensus 123 sMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 123 AMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp EECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTSCBSSCCEEEEEEEC
T ss_pred EEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEC
Confidence 999999999999999999999999999999999999 99999999999987 5899999999999985
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=99.97 E-value=2.3e-32 Score=265.17 Aligned_cols=128 Identities=38% Similarity=0.669 Sum_probs=117.9
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCC-CCCCCCCceEEecccCCCCCCceEE
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFF 77 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~-~l~H~~~GlLsMA~~g~ns~GSQFF 77 (603)
+.+|++||+.+||+ |||||++ |||||||+ .++|+||++|||..|++|+. .+.|+.+|+|+||+.++|+++||||
T Consensus 49 v~NF~~L~~~g~Y~g~~FhRvi~~-f~iQgGd~-~~~g~gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFF 126 (185)
T 2hq6_A 49 CRNFIQLCLEAYYDNTIFHRVVPG-FIVQGGDP-TGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFF 126 (185)
T ss_dssp HHHHHHHHHTTTTTTEECCEEETT-TEEEECCT-TSSSSCCCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEE
T ss_pred HHHHHHHhhcCccCCCEEEEEECC-CEEEcCCC-CCCCCCCCcccCCccccccccCcccCCCeEEEEccCCCCCccceEE
Confidence 46899999999999 9999999 99999998 58899999999999999975 6889999999999999999999999
Q ss_pred EEccCCCCCCCCCcEEEEEEeCHHHH--HHHHhcCCC-CCCCCCCeEEeeeeeccccc
Q 007440 78 ITFRRQHHLDGKHVVFGKVVKGLNIV--KKIEQVGTG-DGKPAQPVKIIDCGEFSESK 132 (603)
Q Consensus 78 ItL~~~p~LDGk~vVFGrVVeGmEVL--~kIe~v~t~-~grP~~~I~I~~cGvl~d~k 132 (603)
|||.++++||++|||||+|+ ||+|+ .+|+.++++ +++|+.+|+|.+|++|.++.
T Consensus 127 It~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~P~~~v~I~~~~v~~~Pf 183 (185)
T 2hq6_A 127 FTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPF 183 (185)
T ss_dssp EESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSCBSSCCEEEEEEEEECTT
T ss_pred EECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCCCCCCeEEEEEEEeCCCC
Confidence 99999999999999999999 88775 567788775 78999999999999998763
No 32
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=4.8e-32 Score=271.24 Aligned_cols=128 Identities=30% Similarity=0.492 Sum_probs=117.0
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccC--CCCCCCCCC-CCCCCCCceEEecccCC------
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIY--GGKFTDENF-KLDHNGPGILSMANSGA------ 69 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~Siy--G~~f~dE~~-~l~H~~~GlLsMA~~g~------ 69 (603)
..+|++||+.+||+ |||||++ |||||||++ ++|+||++|| |..|++|+. .+.|+.+|+|+||+.++
T Consensus 46 v~NF~~L~~~g~Ydgt~FhRVi~~-FmiQgGdp~-~~G~Gg~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~ 123 (232)
T 3bkp_A 46 CRNFVQLCLEGYYVNTIFHRVVKD-FIVQGGDPT-GTGRGGADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAE 123 (232)
T ss_dssp HHHHHHHHHHTTTTTCBEEEEETT-TEEEECCTT-SSSSCCCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC-------
T ss_pred HHHHHHHhhcCccCCCEEEEEeCC-CEEEcCCCC-CCCCCCCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccc
Confidence 46899999999999 9999999 999999985 8899999999 899999975 78899999999999987
Q ss_pred --------CCCCceEEEEccCCCCCCCCCcEEEEEEeCHHH--HHHHHhcCCC-CCCCCCCeEEeeeeeccccc
Q 007440 70 --------NTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNI--VKKIEQVGTG-DGKPAQPVKIIDCGEFSESK 132 (603)
Q Consensus 70 --------ns~GSQFFItL~~~p~LDGk~vVFGrVVeGmEV--L~kIe~v~t~-~grP~~~I~I~~cGvl~d~k 132 (603)
++++|||||||.+++||||+|||||+|| ||+| |++|+.++++ +++|+.+|+|.+|+||.++.
T Consensus 124 n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~dPf 196 (232)
T 3bkp_A 124 NDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNPF 196 (232)
T ss_dssp ---------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTTSCBCGGGCBSSCCBEEEEEEEECCC
T ss_pred cccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHcCCcCCCCCcCCCeEEEEEEEEcCCh
Confidence 6999999999999999999999999999 7765 8899999986 78999999999999999874
No 33
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=99.97 E-value=3.5e-32 Score=258.99 Aligned_cols=123 Identities=27% Similarity=0.354 Sum_probs=110.9
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecc-cCCCCCCceEE
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMAN-SGANTNGSQFF 77 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~-~g~ns~GSQFF 77 (603)
..+|++||+.+||+ |||||++ |||||||++.++ |.++||..|++|+....++.+|+|+||+ .++|+++||||
T Consensus 24 ~~NF~~L~~~g~Y~g~~FhRvi~~-f~iQgGd~~~~~---g~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~s~gSQFf 99 (164)
T 1lop_A 24 VKNFLDYCREGFYNNTIFHRVING-FMIQGGGFEPGM---KQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFF 99 (164)
T ss_dssp HHHHHHHHHTTTTTTEECCEEETT-TEEEESSEETTT---EECCCCCCBCCCCCSSCCCCTTEEEECCCSSTTCBCSCEE
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCC-ceEecCCcccCC---CcCCCCCccccccccccccCccEEEEeecCCCCCccceEE
Confidence 46899999999999 9999999 999999997554 4567899999998764555799999996 58999999999
Q ss_pred EEccCCCCCCCC--------CcEEEEEEeCHHHHHHHHhcCCCC-----CCCCCCeEEeeeeec
Q 007440 78 ITFRRQHHLDGK--------HVVFGKVVKGLNIVKKIEQVGTGD-----GKPAQPVKIIDCGEF 128 (603)
Q Consensus 78 ItL~~~p~LDGk--------~vVFGrVVeGmEVL~kIe~v~t~~-----grP~~~I~I~~cGvl 128 (603)
|||.+++|||++ |||||+||+|||||++|+.+++.. ++|..+|+|.+|+++
T Consensus 100 I~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~~~v~ 163 (164)
T 1lop_A 100 INVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVIIESVTVS 163 (164)
T ss_dssp EESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCEEEEEEEC
T ss_pred EEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCCeEEEEEEEe
Confidence 999999999998 999999999999999999998863 789999999999986
No 34
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=99.97 E-value=2.3e-31 Score=253.76 Aligned_cols=123 Identities=30% Similarity=0.437 Sum_probs=110.4
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEeccc-CCCCCCceEE
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMANS-GANTNGSQFF 77 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~~-g~ns~GSQFF 77 (603)
..+|++||+.+||+ |||||++ |||||||++.+.+ ...++.+|++|+....|+.+|+|+||+. ++|+++||||
T Consensus 29 ~~NF~~L~~~g~Y~g~~FhRvi~~-f~iQgGd~~~~~~---~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFf 104 (166)
T 1v9t_A 29 VQNFVDYVNSGFYNNTTFHRVIPG-FMIQGGGFTEQMQ---QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFF 104 (166)
T ss_dssp HHHHHHHHHTTTTTTCBEEEEETT-TEEEESSBCTTCC---BCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEE
T ss_pred HHHHHHHhccCCCCCCEEEEEECC-cEEEcCCcCcCCC---CCCCCCcccccccccccCCceEEEEeecCCCCCccceEE
Confidence 46899999999999 9999999 9999999865432 2346788999987777788999999986 6999999999
Q ss_pred EEccCCCCCCCC-----CcEEEEEEeCHHHHHHHHhcCCCC-----CCCCCCeEEeeeeec
Q 007440 78 ITFRRQHHLDGK-----HVVFGKVVKGLNIVKKIEQVGTGD-----GKPAQPVKIIDCGEF 128 (603)
Q Consensus 78 ItL~~~p~LDGk-----~vVFGrVVeGmEVL~kIe~v~t~~-----grP~~~I~I~~cGvl 128 (603)
|||.+++|||++ |||||+||+|||||++|+.+++.. ++|+.+|+|.+|.++
T Consensus 105 I~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~~~v~I~~~~v~ 165 (166)
T 1v9t_A 105 INVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSATVL 165 (166)
T ss_dssp EESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCBEEEEEEC
T ss_pred EEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcCCCeEEEEEEEe
Confidence 999999999998 999999999999999999998864 689999999999986
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=99.97 E-value=4.3e-31 Score=251.95 Aligned_cols=123 Identities=28% Similarity=0.384 Sum_probs=109.8
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCceEEecc-cCCCCCCceEE
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTGGESIYGGKFTDENFKLDHNGPGILSMAN-SGANTNGSQFF 77 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~GG~SiyG~~f~dE~~~l~H~~~GlLsMA~-~g~ns~GSQFF 77 (603)
+.+|++||+.+||+ |||||++ |||||||++.+.+ ..+++..|++|.....++.+|+|+||+ .++|+++||||
T Consensus 28 ~~NF~~L~~~g~Y~g~~FhRvi~~-f~iQgGd~~~~~~---~~~~~~~~~~E~~~~l~~~~G~lsmA~~~~p~t~gSQFf 103 (167)
T 3s6m_A 28 VENFLNYVKKGHYDGTIFHRVING-FMIQGGGFEPGLK---QKPTDAPIANEANNGLKNDTYTIAMARTNDPHSATAQFF 103 (167)
T ss_dssp HHHHHHHHHHTTTTTEECCEEETT-TEEEESSEETTTE---ECCCCCCBCCCGGGCCCCCTTEEEECCCSSTTCBCSCEE
T ss_pred HHHHHHHhhhcccCCCEeEEecCC-cEEEeccccCCCC---CCCCCCccCCcccccccCCccEEEEecCCCCCCccceEE
Confidence 46899999999999 9999999 9999999865433 245678899996655566899999999 68999999999
Q ss_pred EEccCCCCCCCC--------CcEEEEEEeCHHHHHHHHhcCCCC-----CCCCCCeEEeeeeec
Q 007440 78 ITFRRQHHLDGK--------HVVFGKVVKGLNIVKKIEQVGTGD-----GKPAQPVKIIDCGEF 128 (603)
Q Consensus 78 ItL~~~p~LDGk--------~vVFGrVVeGmEVL~kIe~v~t~~-----grP~~~I~I~~cGvl 128 (603)
|||.+++|||++ |||||+||+|||||++|++++++. ++|+.+|+|.+|.||
T Consensus 104 I~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 104 INVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPNDDVVIEKAVVV 167 (167)
T ss_dssp EESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSSCCEEEEEEEC
T ss_pred EEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCCCeEEEEEEEC
Confidence 999999999999 999999999999999999999864 799999999999886
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.93 E-value=3.3e-27 Score=249.51 Aligned_cols=115 Identities=23% Similarity=0.418 Sum_probs=99.3
Q ss_pred hhhHHHhhhcCceE---EEEEeCCCceEEeCCCCCCCCCC---------------------CCccCCCCCCCCCC-----
Q 007440 2 SSFFFFSFTVHLFD---HVLIIQPFFPLQGGDFSKGNGTG---------------------GESIYGGKFTDENF----- 52 (603)
Q Consensus 2 ~slF~kL~~~g~Yd---FhRVIpg~f~IQgGD~~~g~G~G---------------------G~SiyG~~f~dE~~----- 52 (603)
+.+|++||+.+||+ |||| +| |||||||++ ++|+| +.++|+..|++|++
T Consensus 203 v~NFl~L~~~GfYdGt~FHRV-~g-FmIQgGDp~-g~G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~ 279 (369)
T 3rfy_A 203 AGNFVDLVERHFYDGMEIQRS-DG-FVVQTGDPE-GPAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQV 279 (369)
T ss_dssp HHHHHHHHHTTTTTTEECEEE-EE-EEECCCCCC-CCCSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEE
T ss_pred HHHHHHHhhcCCcCCCeeeee-CC-eeEecCCCC-CCCCCccCcccCcCcccCccccccCCCCCcCCCcccccccccccc
Confidence 46899999999999 9999 99 999999995 56655 46788888988854
Q ss_pred CCCCCCCceEEeccc--CCCCCCceEEEEc-------cCCCCCCCCCcEEEEEEeCHHHHHHHHhcCCCCCCCCCCeEEe
Q 007440 53 KLDHNGPGILSMANS--GANTNGSQFFITF-------RRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQPVKII 123 (603)
Q Consensus 53 ~l~H~~~GlLsMA~~--g~ns~GSQFFItL-------~~~p~LDGk~vVFGrVVeGmEVL~kIe~v~t~~grP~~~I~I~ 123 (603)
.++|+.+|+|+||+. ++|+++||||||| .+++||||+|||||+||+|||||++|+. +..+..|+|+
T Consensus 280 ~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgkytVFG~VveGmdVVdkI~~-----GD~I~sv~I~ 354 (369)
T 3rfy_A 280 VIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLKV-----GDVIESIQVV 354 (369)
T ss_dssp EECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCEEEEEEEEESTTGGGGCCT-----TCEEEEEEEE
T ss_pred ccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCeeEEEEEecCHHHHHHHhC-----CCceEEEEEe
Confidence 788999999999997 8999999999999 4789999999999999999999999977 4445555554
Q ss_pred e
Q 007440 124 D 124 (603)
Q Consensus 124 ~ 124 (603)
.
T Consensus 355 ~ 355 (369)
T 3rfy_A 355 S 355 (369)
T ss_dssp E
T ss_pred c
Confidence 4
No 37
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=33.42 E-value=21 Score=32.72 Aligned_cols=45 Identities=29% Similarity=0.365 Sum_probs=30.6
Q ss_pred CCCceEEecccCCCCCCceEEEEccCCCCCCC------CCcEEEEEEeCHHHHHHH
Q 007440 57 NGPGILSMANSGANTNGSQFFITFRRQHHLDG------KHVVFGKVVKGLNIVKKI 106 (603)
Q Consensus 57 ~~~GlLsMA~~g~ns~GSQFFItL~~~p~LDG------k~vVFGrVVeGmEVL~kI 106 (603)
...|-|+.-..+. -|-|-+++.|.+.+ ..++||+|+.|++.|..|
T Consensus 73 ~~~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v 123 (136)
T 1zx8_A 73 VEIGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKI 123 (136)
T ss_dssp BCTTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGC
T ss_pred CCCCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhC
Confidence 4567777654433 47777777754443 478999999998887544
Done!