Citrus Sinensis ID: 007441

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600---
MAASFPLLQLTSSVNFCSRSVKFSSITCASTNGRESESADNGVKGVEQLPEKKRRAELSARIASGELTVERSGFPSRLRNGLSKLGIPHDILEALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALGAPQVEMTTGATIHTTNGLRMTVTRRIKPPIMPVLKEDASVGSSFNGDTTHGNKHDISPAHFKSL
ccccccccccccccccccccccccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccHHHHcccHHHHHHHHHHHHHccEEEEEEcccCEEEEccHHHHHHHHHHcccccccHHHHHHHHHHccccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccHHHHHHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccHHHHcccHHHHHHHHHHcccccccccccEEccccEEEccEECccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccEEECccccccccccccCEECccccEEEEEECcccccccccccccccccccccccccccccccccccccccc
*******LQLTSSVNFCSRSVKFSSIT*************************************GELTVERSGFPSRLRNGLSKLGIPHDILEALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALGAPQVEMTTGATIHTTNGLRMTVTRRIKPPIM*****************************F***
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MAASFPLLQLTSSVNFCSRSVKFSSITCASTNGRESESADNGVKGVEQLPEKKRRAELSARIASGELTVERSGFPSRLRNGLSKLGIPHDILEALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPNETNQDYCYLPFGGGPRKCVGDMFATFENIVAVAMLVRQFNFQMALGAPQVEMTTGATIHTTNGLRMTVTRRIKPPIMPVLKEDASVGSSFNGDTTHGNKHDISPAHFKSL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein LUTEIN DEFICIENT 5, chloroplastic Heme-containing cytochrome P450 involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylation of alpha- and beta-carotene. Has also a low activity toward the epsilon-rings of alpha-carotene. The beta-ring of alpha-carotene is the preferred substrate in planta.confidentQ93VK5

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3K9V, chain A
Confidence level:very confident
Coverage over the Query: 111-328,340-564
View the alignment between query and template
View the model in PyMOL
Template: 3NXU, chain A
Confidence level:very confident
Coverage over the Query: 78-94,111-326,339-564
View the alignment between query and template
View the model in PyMOL