BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007442
(603 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 175/301 (58%), Gaps = 18/301 (5%)
Query: 249 IPIYPYR----EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQ 304
+P YR ++E+AT F K +G G FG VY G L++ VA+KR + GI++
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 305 VVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIR 362
EI+ +S HP+LV L+G ER E IL+Y++M NG L +HL +SW R
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEI--SHI 420
L + + A+ + +LH+ I HRD+KS NILLD NF K+ DFG+S+ G TE+ +H+
Sbjct: 142 LEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKG-TELGQTHL 197
Query: 421 STAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAA 480
+GT GY+DP+Y L++KSDVYSFGVVL E++ A + S P VNLA A
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 481 DRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELE 540
+ + G+L++I+DP + +D S+ K + A +CLA + RPSM +V +LE
Sbjct: 258 ESHNNGQLEQIVDPNL------ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
Query: 541 H 541
+
Sbjct: 312 Y 312
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 175/301 (58%), Gaps = 18/301 (5%)
Query: 249 IPIYPYR----EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQ 304
+P YR ++E+AT F K +G G FG VY G L++ VA+KR + GI++
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 305 VVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIR 362
EI+ +S HP+LV L+G ER E IL+Y++M NG L +HL +SW R
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEI--SHI 420
L + + A+ + +LH+ I HRD+KS NILLD NF K+ DFG+S+ G TE+ +H+
Sbjct: 142 LEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKG-TELDQTHL 197
Query: 421 STAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAA 480
+GT GY+DP+Y L++KSDVYSFGVVL E++ A + S P VNLA A
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 481 DRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELE 540
+ + G+L++I+DP + +D S+ K + A +CLA + RPSM +V +LE
Sbjct: 258 ESHNNGQLEQIVDPNL------ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
Query: 541 H 541
+
Sbjct: 312 Y 312
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 172/301 (57%), Gaps = 13/301 (4%)
Query: 246 ISNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKH-RDTDGIQQ 304
+ + + RE++ A+ FS K LG G FG VY G+L + LVA+KR+K R G Q
Sbjct: 22 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ 81
Query: 305 VVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDG---LSWPI 361
E+++IS H NL+RL G + E++LVY +M NG++ L RER + L WP
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPESQPPLDWPK 140
Query: 362 RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS 421
R +A+ +A+ +A+LH +P I HRD+K++NILLD F++ V DFGL++L + H+
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 422 TAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPN--EVNLAALA 479
A +GT G++ P+Y S+K+DV+ +GV+L+E+IT + D +R N +V L
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 480 ADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATEL 539
+ + +L+ ++D ++ +G+ V ++ ++A C RP M+EV L
Sbjct: 261 KGLLKEKKLEALVD---VDLQGNYKD---EEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
Query: 540 E 540
E
Sbjct: 315 E 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 171/301 (56%), Gaps = 13/301 (4%)
Query: 246 ISNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQ-Q 304
+ + + RE++ A+ F K LG G FG VY G+L + LVA+KR+K T G + Q
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ 73
Query: 305 VVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDG---LSWPI 361
E+++IS H NL+RL G + E++LVY +M NG++ L RER + L WP
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPESQPPLDWPK 132
Query: 362 RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS 421
R +A+ +A+ +A+LH +P I HRD+K++NILLD F++ V DFGL++L + H+
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 422 TAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPN--EVNLAALA 479
A +G G++ P+Y S+K+DV+ +GV+L+E+IT + D +R N +V L
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 480 ADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATEL 539
+ + +L+ ++D ++ +G+ V ++ ++A C RP M+EV L
Sbjct: 253 KGLLKEKKLEALVD---VDLQGNYKD---EEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
Query: 540 E 540
E
Sbjct: 307 E 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 160/303 (52%), Gaps = 25/303 (8%)
Query: 252 YPYREIEKATIGFSEK------QRLGTGAFGTVYAGKLQNDLLVAIKRIKHR---DTDGI 302
+ + E++ T F E+ ++G G FG VY G + N+ VA+K++ T+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 303 -QQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGD-GLSWP 360
QQ EIK+++ H NLV LLG S + + LVY +MPNG+L L G LSW
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 361 IRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
+R +A A I LH N I HRDIKS+NILLD F +K++DFGL+R +
Sbjct: 134 MRCKIAQGAANGINFLHE--NHHI-HRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 421 STAP-QGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALA 479
+ GT Y+ P+ + ++ KSD+YSFGVVL+EIIT L VD R P ++ L
Sbjct: 191 MXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKE 248
Query: 480 ADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATEL 539
+ +++ ID + +DA + SV + +A +CL ++ RP + +V L
Sbjct: 249 EIEDEEKTIEDYID------KKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
Query: 540 EHI 542
+ +
Sbjct: 302 QEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 25/303 (8%)
Query: 252 YPYREIEKATIGFSEK------QRLGTGAFGTVYAGKLQNDLLVAIKRIKHR---DTDGI 302
+ + E++ T F E+ ++G G FG VY G + N+ VA+K++ T+ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 303 -QQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGD-GLSWP 360
QQ EIK+++ H NLV LLG S + + LVY +MPNG+L L G LSW
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 361 IRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
+R +A A I LH N I HRDIKS+NILLD F +K++DFGL+R +
Sbjct: 128 MRCKIAQGAANGINFLHE--NHHI-HRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 421 STAP-QGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALA 479
GT Y+ P+ + ++ KSD+YSFGVVL+EIIT L VD R P ++ L
Sbjct: 185 MXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKE 242
Query: 480 ADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATEL 539
+ +++ ID + +DA + SV + +A +CL ++ RP + +V L
Sbjct: 243 EIEDEEKTIEDYID------KKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
Query: 540 EHI 542
+ +
Sbjct: 296 QEM 298
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 25/303 (8%)
Query: 252 YPYREIEKATIGFSEK------QRLGTGAFGTVYAGKLQNDLLVAIKRIKHR---DTDGI 302
+ + E++ T F E+ ++G G FG VY G + N+ VA+K++ T+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 303 -QQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGD-GLSWP 360
QQ EIK+++ H NLV LLG S + + LVY +MPNG+L L G LSW
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 361 IRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
+R +A A I LH N I HRDIKS+NILLD F +K++DFGL+R +
Sbjct: 134 MRCKIAQGAANGINFLHE--NHHI-HRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 421 STAP-QGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALA 479
GT Y+ P+ + ++ KSD+YSFGVVL+EIIT L VD R P ++ L
Sbjct: 191 MXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKE 248
Query: 480 ADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATEL 539
+ +++ ID + +DA + SV + +A +CL ++ RP + +V L
Sbjct: 249 EIEDEEKTIEDYID------KKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
Query: 540 EHI 542
+ +
Sbjct: 302 QEM 304
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 153/301 (50%), Gaps = 25/301 (8%)
Query: 252 YPYREIEKATIGFSEK------QRLGTGAFGTVYAGKLQNDLLVAIKRIKHR---DTDGI 302
+ + E++ T F E+ + G G FG VY G + N+ VA+K++ T+ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 303 -QQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDG-LSWP 360
QQ EIK+ + H NLV LLG S + + LVY + PNG+L L G LSW
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 361 IRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
R +A A I LH N I HRDIKS+NILLD F +K++DFGL+R +
Sbjct: 125 XRCKIAQGAANGINFLHE--NHHI-HRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 421 STAP-QGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALA 479
+ GT Y P+ + ++ KSD+YSFGVVL+EIIT L VD R P ++ L
Sbjct: 182 XXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKE 239
Query: 480 ADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATEL 539
+ +++ ID + +DA + SV +A +CL ++ RP + +V L
Sbjct: 240 EIEDEEKTIEDYID------KKXNDADS-TSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
Query: 540 E 540
+
Sbjct: 293 Q 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 116/199 (58%), Gaps = 12/199 (6%)
Query: 267 KQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRD--TDGIQQVVNEIKLISCVSHPNLVRLL 324
K+++G G+FGTV+ + VA+K + +D + + + + E+ ++ + HPN+V +
Sbjct: 42 KEKIGAGSFGTVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQ----RERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
G + +V E++ G+L + L RE+ D RL++A + A+ + +LH+
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR---RLSMAYDVAKGMNYLHNR- 156
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
NPPI HRD+KS N+L+D + KV DFGLSRL + A GTP ++ P+ ++
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA-AGTPEWMAPEVLRDEP 215
Query: 441 LSDKSDVYSFGVVLVEIIT 459
++KSDVYSFGV+L E+ T
Sbjct: 216 SNEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 119/200 (59%), Gaps = 14/200 (7%)
Query: 267 KQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRD--TDGIQQVVNEIKLISCVSHPNLVRLL 324
K+++G G+FGTV+ + VA+K + +D + + + + E+ ++ + HPN+V +
Sbjct: 42 KEKIGAGSFGTVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQ----RERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
G + +V E++ G+L + L RE+ D RL++A + A+ + +LH+
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR---RLSMAYDVAKGMNYLHNR- 156
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQYHQNF 439
NPPI HR++KS N+L+D + KV DFGLSRL T +S S A GTP ++ P+ ++
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--GTPEWMAPEVLRDE 214
Query: 440 HLSDKSDVYSFGVVLVEIIT 459
++KSDVYSFGV+L E+ T
Sbjct: 215 PSNEKSDVYSFGVILWELAT 234
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 5/221 (2%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
Q +G+G FG V+ G N VAIK IK + E +++ +SHP LV+L G
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+E+ LV+EFM +G L +L+ +RG + L + ++ + +A+L A + HR
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L+ N KV+DFG++R + + ST + + P+ S KSDV
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
+SFGV++ E+ + K+ +R +EV R+ K RL
Sbjct: 208 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL 248
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 5/221 (2%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
Q +G+G FG V+ G N VAIK I+ + + E +++ +SHP LV+L G
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+E+ LV+EFM +G L +L+ +RG + L + ++ + +A+L A + HR
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L+ N KV+DFG++R + + ST + + P+ S KSDV
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
+SFGV++ E+ + K+ +R +EV R+ K RL
Sbjct: 191 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL 231
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 5/221 (2%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
Q +G+G FG V+ G N VAIK I+ + + E +++ +SHP LV+L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+E+ LV+EFM +G L +L+ +RG + L + ++ + +A+L A + HR
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA---SVIHR 127
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L+ N KV+DFG++R + + ST + + P+ S KSDV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
+SFGV++ E+ + K+ +R +EV R+ K RL
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL 228
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 5/221 (2%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
Q +G+G FG V+ G N VAIK I+ + + E +++ +SHP LV+L G
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+E+ LV+EFM +G L +L+ +RG + L + ++ + +A+L A + HR
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L+ N KV+DFG++R + + ST + + P+ S KSDV
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
+SFGV++ E+ + K+ +R +EV R+ K RL
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL 226
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 5/221 (2%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
Q +G+G FG V+ G N VAIK I+ + + E +++ +SHP LV+L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+E+ LV+EFM +G L +L+ +RG + L + ++ + +A+L A + HR
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L+ N KV+DFG++R + + ST + + P+ S KSDV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
+SFGV++ E+ + K+ +R +EV R+ K RL
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL 228
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 5/221 (2%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
Q +G+G FG V+ G N VAIK I+ + + E +++ +SHP LV+L G
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+E+ LV EFM +G L +L+ +RG + L + ++ + +A+L A + HR
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L+ N KV+DFG++R + + ST + + P+ S KSDV
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
+SFGV++ E+ + K+ +R +EV R+ K RL
Sbjct: 189 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL 229
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 8 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKE 64
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ +S + L +A +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 124
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 125 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 180
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 3 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 59
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ +S + L +A +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 120 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 175
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 3 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKE 59
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ +S + L +A +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 120 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 175
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 3 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKE 59
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ +S + L +A +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 120 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 175
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 3 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 59
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ +S + L +A +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 120 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 175
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 11/207 (5%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNEIKLISC 314
E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E ++
Sbjct: 28 EMERTDI--TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKE 84
Query: 315 VSHPNLVRLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAI 373
+ HPNLV+LLG C++E I V E+MP G L +L+ + ++ + L +A + + A+
Sbjct: 85 IKHPNLVQLLGVCTLEPPFYI-VTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAM 143
Query: 374 AHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLD 432
+L HRD+ + N L+ N KVADFGLSRL MT ++ + A P +
Sbjct: 144 EYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTA 199
Query: 433 PQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P+ S KSDV++FGV+L EI T
Sbjct: 200 PESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 13/214 (6%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 4 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKE 60
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 120
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ TAP G
Sbjct: 121 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY--TAPAGAK 174
Query: 429 ---GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 175 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 112/214 (52%), Gaps = 13/214 (6%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 5 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 61
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ TAP G
Sbjct: 122 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTY--TAPAGAK 175
Query: 429 ---GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 176 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 5 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 61
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 122 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 177
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 8 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 64
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 125 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 180
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 3 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 59
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 119
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 120 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 175
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 5 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 61
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 121
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 122 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 177
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 11/225 (4%)
Query: 237 KRCLKEARGISNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIK 295
KR G+S P Y E+E+ I + K +LG G +G VY G + L VA+K +K
Sbjct: 199 KRNKPTIYGVS--PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK 254
Query: 296 HRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGD 355
DT +++ + E ++ + HPNLV+LLG ++ EFM G L +L+
Sbjct: 255 -EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 313
Query: 356 GLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
+S + L +A + + A+ +L HR++ + N L+ N KVADFGLSRL MT
Sbjct: 314 EVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL-MT 369
Query: 416 EISHISTAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
++ + A P + P+ S KSDV++FGV+L EI T
Sbjct: 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 8 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 64
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 125 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 180
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 16 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 72
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 73 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 132
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 133 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 188
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 3 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 59
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 119
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 120 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 175
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 8 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 64
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 125 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 180
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 7 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 63
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 123
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT ++ + A P
Sbjct: 124 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFP 179
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 9/206 (4%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNEIKLISC 314
E+E+ I + K +LG G FG VY G + L VA+K +K DT +++ + E ++
Sbjct: 7 EMERTDI--TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 63
Query: 315 VSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIA 374
+ HPNLV+LLG ++ EFM G L +L+ +S + L +A + + A+
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 123
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDP 433
+L HRD+ + N L+ N KVADFGLSRL MT + + A P + P
Sbjct: 124 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAP 179
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV++FGV+L EI T
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 4 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 60
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 120
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT + + A P
Sbjct: 121 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFP 176
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 11/225 (4%)
Query: 237 KRCLKEARGISNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIK 295
KR G+S P Y E+E+ I + K +LG G +G VY G + L VA+K +K
Sbjct: 196 KRNKPTVYGVS--PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK 251
Query: 296 HRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGD 355
DT +++ + E ++ + HPNLV+LLG ++ EFM G L +L+
Sbjct: 252 -EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 310
Query: 356 GLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
++ + L +A + + A+ +L HR++ + N L+ N KVADFGLSRL MT
Sbjct: 311 EVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL-MT 366
Query: 416 EISHISTAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
++ + A P + P+ S KSDV++FGV+L EI T
Sbjct: 367 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 9/212 (4%)
Query: 250 PIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNE 308
P Y E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E
Sbjct: 8 PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 64
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ + HPNLV+LLG ++ EFM G L +L+ ++ + L +A +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ A+ +L HRD+ + N L+ N KVADFGLSRL MT + + A P
Sbjct: 125 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFP 180
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ S KSDV++FGV+L EI T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 11/225 (4%)
Query: 237 KRCLKEARGISNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIK 295
KR G+S P Y E+E+ I + K +LG G +G VY G + L VA+K +K
Sbjct: 238 KRNKPTVYGVS--PNYDKWEMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK 293
Query: 296 HRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGD 355
DT +++ + E ++ + HPNLV+LLG ++ EFM G L +L+
Sbjct: 294 -EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 352
Query: 356 GLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
++ + L +A + + A+ +L HR++ + N L+ N KVADFGLSRL MT
Sbjct: 353 EVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL-MT 408
Query: 416 EISHISTAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
++ + A P + P+ S KSDV++FGV+L EI T
Sbjct: 409 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 9/206 (4%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNEIKLISC 314
E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E ++
Sbjct: 7 EMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKE 63
Query: 315 VSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIA 374
+ HPNLV+LLG ++ EFM G L +L+ +S + L +A + + A+
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 123
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDP 433
+L HRD+ + N L+ N KVADFGLSRL MT + + A P + P
Sbjct: 124 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTXTAHAGAKFPIKWTAP 179
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV++FGV+L EI T
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 9/206 (4%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNEIKLISC 314
E+E+ I + K +LG G +G VY G + L VA+K +K DT +++ + E ++
Sbjct: 7 EMERTDI--TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 63
Query: 315 VSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIA 374
+ HPNLV+LLG ++ EFM G L +L+ +S + L +A + + A+
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 123
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDP 433
+L HRD+ + N L+ N KVADFGLSRL MT + + A P + P
Sbjct: 124 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL-MTGDTFTAHAGAKFPIKWTAP 179
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV++FGV+L EI T
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 29/212 (13%)
Query: 267 KQRLGTGAFGTVYAGKLQNDL-LVAIKRIKHRDTDG-------IQQVVNEIKLISCVSHP 318
++++G G FG V+ G+L D +VAIK + D++G Q+ E+ ++S ++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+L G + +V EF+P G L L ++ + W ++L + ++ A I ++ +
Sbjct: 84 NIVKLYG--LMHNPPRMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 379 AINPPIYHRDIKSSNIL---LDYNFK--SKVADFGLSRLGMTEISHI-----STAPQGTP 428
NPPI HRD++S NI LD N +KVADFGLS+ + +S + AP+ T
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPE-TI 198
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
G + Y ++K+D YSF ++L I+T
Sbjct: 199 GAEEESY------TEKADTYSFAMILYTILTG 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 109/211 (51%), Gaps = 11/211 (5%)
Query: 254 YREIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLIS 313
Y EIE + + S R+G+G+FGTVY GK D+ V I ++ + Q NE+ ++
Sbjct: 30 YWEIEASEVMLST--RIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 314 CVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAI 373
H N++ +G + + +V ++ +L +HL + + + + +A +TAQ +
Sbjct: 88 KTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTAQGM 145
Query: 374 AHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLD 432
+LH+ I HRD+KS+NI L K+ DFGL+ + S P G+ ++
Sbjct: 146 DYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 433 PQ---YHQNFHLSDKSDVYSFGVVLVEIITA 460
P+ N S +SDVYS+G+VL E++T
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 132/283 (46%), Gaps = 34/283 (12%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ + +V ++ +L HL + +A +TA+ + +LH+ I HR
Sbjct: 90 T-KPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAK---SIIHR 144
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ-----GTPGYLDPQ---YHQNF 439
D+KS+NI L + K+ DFGL+ TE S S + Q G+ ++ P+ +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEH 499
S +SDVY+FG+VL E++T P + +N + + +G L P + +
Sbjct: 201 PYSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIEMVGRGSL----SPDLSKV 250
Query: 500 RGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
R + ++ L CL RD RPS + E+E +
Sbjct: 251 RSNCPK-------RMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 29/212 (13%)
Query: 267 KQRLGTGAFGTVYAGKLQNDL-LVAIKRIKHRDTDG-------IQQVVNEIKLISCVSHP 318
++++G G FG V+ G+L D +VAIK + D++G Q+ E+ ++S ++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+L G + +V EF+P G L L ++ + W ++L + ++ A I ++ +
Sbjct: 84 NIVKLYG--LMHNPPRMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 379 AINPPIYHRDIKSSNIL---LDYNFK--SKVADFGLSRLGMTEISHI-----STAPQGTP 428
NPPI HRD++S NI LD N +KVADFG S+ + +S + AP+ T
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPE-TI 198
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
G + Y ++K+D YSF ++L I+T
Sbjct: 199 GAEEESY------TEKADTYSFAMILYTILTG 224
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 32/281 (11%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
Q +G G FG V G + + VA+K IK+ T Q + E +++ + H NLV+LLG
Sbjct: 18 QTIGKGEFGDVMLGDYRGNK-VAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 328 IE-RGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYH 386
+E +G +V E+M G+L +L+ L L +++ +A+ +L H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 131
Query: 387 RDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSD 446
RD+ + N+L+ + +KV+DFGL++ E S + + P+ + S KSD
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 447 VYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAG 506
V+SFG++L EI + F R P R+ KG ++ + G
Sbjct: 188 VWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKG------------YKMDAPDG 229
Query: 507 TLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIRTRTM 547
+V++V + C MRPS ++ +LEHI+T +
Sbjct: 230 CPPAVYEVMK---NCWHLDAAMRPSFLQLREQLEHIKTHEL 267
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 32/281 (11%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
Q +G G FG V G + + VA+K IK+ T Q + E +++ + H NLV+LLG
Sbjct: 12 QTIGKGEFGDVMLGDYRGNK-VAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 328 IE-RGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYH 386
+E +G +V E+M G+L +L+ L L +++ +A+ +L H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 125
Query: 387 RDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSD 446
RD+ + N+L+ + +KV+DFGL++ E S + + P+ + S KSD
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 447 VYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAG 506
V+SFG++L EI + F R P R+ KG ++ + G
Sbjct: 182 VWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKG------------YKMDAPDG 223
Query: 507 TLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIRTRTM 547
+V++V + C MRPS ++ +LEHI+T +
Sbjct: 224 CPPAVYEVMK---NCWHLDAAMRPSFLQLREQLEHIKTHEL 261
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 32/281 (11%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
Q +G G FG V G + + VA+K IK+ T Q + E +++ + H NLV+LLG
Sbjct: 27 QTIGKGEFGDVMLGDYRGNK-VAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 328 IE-RGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYH 386
+E +G +V E+M G+L +L+ L L +++ +A+ +L H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 140
Query: 387 RDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSD 446
RD+ + N+L+ + +KV+DFGL++ E S + + P+ + S KSD
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSD 196
Query: 447 VYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAG 506
V+SFG++L EI + F R P R+ KG ++ + G
Sbjct: 197 VWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKG------------YKMDAPDG 238
Query: 507 TLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIRTRTM 547
+V++V + C MRPS ++ +LEHI+T +
Sbjct: 239 CPPAVYEVMK---NCWHLDAAMRPSFLQLREQLEHIKTHEL 276
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 114/209 (54%), Gaps = 23/209 (11%)
Query: 267 KQRLGTGAFGTVYAGKLQNDL-LVAIKRIKHRDTDG-------IQQVVNEIKLISCVSHP 318
++++G G FG V+ G+L D +VAIK + D++G Q+ E+ ++S ++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+L G + +V EF+P G L L ++ + W ++L + ++ A I ++ +
Sbjct: 84 NIVKLYG--LMHNPPRMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 379 AINPPIYHRDIKSSNIL---LDYNFK--SKVADFGLSRLGMTEISHISTAPQGTPGYLDP 433
NPPI HRD++S NI LD N +KVADF LS+ + +S + G ++ P
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL----LGNFQWMAP 195
Query: 434 QY--HQNFHLSDKSDVYSFGVVLVEIITA 460
+ + ++K+D YSF ++L I+T
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 34/283 (12%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ +V ++ +L HL + +A +TA+ + +LH+ I HR
Sbjct: 90 TA-PQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAK---SIIHR 144
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ-----GTPGYLDPQ---YHQNF 439
D+KS+NI L + K+ DFGL+ TE S S + Q G+ ++ P+ +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEH 499
S +SDVY+FG+VL E++T P + +N + + +G L P + +
Sbjct: 201 PYSFQSDVYAFGIVLYELMTG------QLPYSNINNRDQIIEMVGRGSL----SPDLSKV 250
Query: 500 RGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
R + ++ L CL RD RPS + E+E +
Sbjct: 251 RSNCPK-------RMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 8/212 (3%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLI 312
P EI + +I +K LG G FG V+ G N VA+K +K T +Q + E L+
Sbjct: 5 PAWEIPRESIKLVKK--LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLM 61
Query: 313 SCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQA 372
+ H LVRL + ++ EFM G+L L+ + G + P + + + A+
Sbjct: 62 KTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG 121
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLD 432
+A++ HRD++++N+L+ + K+ADFGL+R+ + + + + P
Sbjct: 122 MAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARV-IEDNEYTAREGAKFPIKWT 177
Query: 433 PQYHQNFH-LSDKSDVYSFGVVLVEIITALKV 463
NF + KS+V+SFG++L EI+T K+
Sbjct: 178 APEAINFGCFTIKSNVWSFGILLYEIVTYGKI 209
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 26/279 (9%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ + +V ++ +L HL + +A +TA+ + +LH+ I HR
Sbjct: 78 T-KPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAK---SIIHR 132
Query: 388 DIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQ---YHQNFHLSD 443
D+KS+NI L + K+ DFGL+ + SH G+ ++ P+ + S
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 444 KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHRGHS 503
+SDVY+FG+VL E++T P + +N + + +G L P + + R +
Sbjct: 193 QSDVYAFGIVLYELMTG------QLPYSNINNRDQIIEMVGRGSL----SPDLSKVRSNC 242
Query: 504 DAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
++ L CL RD RPS + E+E +
Sbjct: 243 PK-------RMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 6/197 (3%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
+RLG G FG V+ G N VA+K +K T +Q + E L+ + H LVRL
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
++ E+M G+L L+ + G + P + + + A+ +A++ HR
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHR 134
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH-LSDKSD 446
D++++N+L+ + K+ADFGL+R+ + + + + P NF + KSD
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARV-IEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 447 VYSFGVVLVEIITALKV 463
V+SFG++L EI+T K+
Sbjct: 194 VWSFGILLYEIVTYGKI 210
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 28/279 (10%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
+ LG+G FG V GK + VA+K IK + E + + +SHP LV+ G
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ +V E++ NG L +L R G GL L + + + +A L S HR
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L+D + KV+DFG++R + + S + + P+ F S KSDV
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG-RLDEIIDPLIIEHRGHSDAG 506
++FG+++ E+ + K+ P ++ + ++S+G RL +R H +
Sbjct: 189 WAFGILMWEVFSLGKM------PYDLYTNSEVVLKVSQGHRL----------YRPHLASD 232
Query: 507 TLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIRTR 545
T + ++ + C + RP+ ++ + +E +R +
Sbjct: 233 T------IYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 108/214 (50%), Gaps = 22/214 (10%)
Query: 262 IGFSE---KQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVV----NEIKLISC 314
I F+E ++ +G G FG VY D VA+K +H + I Q + E KL +
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 315 VSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIA 374
+ HPN++ L G ++ LV EF G L + L +R + I + A++ A+ +
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMN 119
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKS--------KVADFGLSRLGMTEISHISTAPQG 426
+LH PI HRD+KSSNIL+ ++ K+ DFGL+R + +S A G
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-EWHRTTKMSAA--G 176
Query: 427 TPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
++ P+ + S SDV+S+GV+L E++T
Sbjct: 177 AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 32/281 (11%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
Q +G G FG V G + + VA+K IK+ T Q + E +++ + H NLV+LLG
Sbjct: 199 QTIGKGEFGDVMLGDYRGNK-VAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 328 IE-RGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYH 386
+E +G +V E+M G+L +L+ L L +++ +A+ +L H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 312
Query: 387 RDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSD 446
RD+ + N+L+ + +KV+DFGL++ E S + + P+ + S KSD
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSD 368
Query: 447 VYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAG 506
V+SFG++L EI + F R P R+ KG ++ + G
Sbjct: 369 VWSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKG------------YKMDAPDG 410
Query: 507 TLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIRTRTM 547
+V+ V + C RP+ ++ +LEHIRT +
Sbjct: 411 CPPAVYDVMK---NCWHLDAATRPTFLQLREQLEHIRTHEL 448
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 269 RLGTGAFGTVYAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
LG GAFG VY K + L A K I+ + + ++ + EI++++ HP +V+LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
G+ ++ EF P G + + E GL+ P V + +A+ LHS I HR
Sbjct: 78 YHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHR 133
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSD---- 443
D+K+ N+L+ ++ADFG+S + + + GTP ++ P+ + D
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-IGTPYWMAPEVVMCETMKDTPYD 192
Query: 444 -KSDVYSFGVVLVEI 457
K+D++S G+ L+E+
Sbjct: 193 YKADIWSLGITLIEM 207
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I++ E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 139
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIE---DNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 197 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 231
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 74 EEPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 129
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIE---DNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 187 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 221
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 269 RLGTGAFGTVYAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
LG GAFG VY K + L A K I+ + + ++ + EI++++ HP +V+LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
G+ ++ EF P G + + E GL+ P V + +A+ LHS I HR
Sbjct: 86 YHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHR 141
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSD---- 443
D+K+ N+L+ ++ADFG+S + + + GTP ++ P+ + D
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-IGTPYWMAPEVVMCETMKDTPYD 200
Query: 444 -KSDVYSFGVVLVEI 457
K+D++S G+ L+E+
Sbjct: 201 YKADIWSLGITLIEM 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 113/222 (50%), Gaps = 19/222 (8%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 329 ERGEQI-LVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
E E I +V E+M G+L L+ E G L P + +A + A +A++ +N HR
Sbjct: 333 E--EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHR 387
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDK 444
D++++NIL+ N KVADFGL+RL E + TA QG + P+ + K
Sbjct: 388 DLRAANILVGENLVCKVADFGLARL--IEDNEY-TARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
SDV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 445 SDVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 480
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 112/221 (50%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I++ E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 139
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL E + TA QG + P+ + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARL--IEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 197 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 231
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 84 EEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 139
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 197 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 231
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 28/266 (10%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
+ LGTG FG V GK + VAIK IK + + E K++ +SH LV+L G
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
++ ++ E+M NG L +L RE L + + +A+ +L S HR
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L++ KV+DFGLSR + + S + + P+ S KSD+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG-RLDEIIDPLIIEHRGHSDAG 506
++FGV++ EI + K+ P E + A+ I++G RL +R H
Sbjct: 205 WAFGVLMWEIYSLGKM------PYERFTNSETAEHIAQGLRL----------YRPH---- 244
Query: 507 TLASVHKVAELAFRCLAFHRDMRPSM 532
LAS KV + + C D RP+
Sbjct: 245 -LAS-EKVYTIMYSCWHEKADERPTF 268
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 27/206 (13%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 328 IERGEQILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + +V ++ +L HL + + + + +A +TAQ + +LH+ I
Sbjct: 102 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAK---SII 154
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ-----GTPGYLDPQYHQNFH 440
HRD+KS+NI L + K+ DFGL+ TE S S + Q G+ ++ P+
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEV---IR 207
Query: 441 LSDK------SDVYSFGVVLVEIITA 460
+ DK SDVY+FG+VL E++T
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTG 233
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 27/206 (13%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 328 IERGEQILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + +V ++ +L HL + + + + +A +TAQ + +LH+ I
Sbjct: 94 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAK---SII 146
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ-----GTPGYLDPQYHQNFH 440
HRD+KS+NI L + K+ DFGL+ TE S S + Q G+ ++ P+
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEV---IR 199
Query: 441 LSDK------SDVYSFGVVLVEIITA 460
+ DK SDVY+FG+VL E++T
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTG 225
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 250 EEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 305
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 363 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 397
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 27/206 (13%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 328 IERGEQILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + +V ++ +L HL + + + + +A +TAQ + +LH+ I
Sbjct: 74 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAK---SII 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ-----GTPGYLDPQYHQNFH 440
HRD+KS+NI L + K+ DFGL+ TE S S + Q G+ ++ P+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEV---IR 179
Query: 441 LSDK------SDVYSFGVVLVEIITA 460
+ DK SDVY+FG+VL E++T
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTG 205
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
+RLG G FG V+ G + VAIK +K T + + E +++ + H LV+L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
E I V E+M G+L L+ G L P + +A + A +A++ +N HR
Sbjct: 74 SEEPIYI-VTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER-MN--YIHR 129
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDK 444
D++S+NIL+ K+ADFGL+RL + TA QG + P+ + K
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIE---DNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 445 SDVYSFGVVLVEIITALKV 463
SDV+SFG++L E++T +V
Sbjct: 187 SDVWSFGILLTELVTKGRV 205
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 250 EEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 305
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 363 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 397
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 73 EEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 128
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 186 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 220
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 75 EEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 130
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 188 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 222
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 77 EEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 132
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 190 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 224
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 84 EEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 139
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL E + TA QG + P+ + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARL--IEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 197 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 231
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 270 LGTGAFG-TVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
LG G FG + + ++ +K + D + + + E+K++ C+ HPN+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
+ + E++ GTL + + + W R++ A + A +A+LHS I HRD
Sbjct: 78 KDKRLNFITEYIKGGTL-RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRD 133
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ-----------------GTPGYL 431
+ S N L+ N VADFGL+RL + E T P+ G P ++
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDE----KTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ +K DV+SFG+VL EII
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 28/266 (10%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
+ LGTG FG V GK + VAIK IK + + E K++ +SH LV+L G
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
++ ++ E+M NG L +L RE L + + +A+ +L S HR
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L++ KV+DFGLSR + + S + + P+ S KSD+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG-RLDEIIDPLIIEHRGHSDAG 506
++FGV++ EI + K+ P E + A+ I++G RL +R H
Sbjct: 205 WAFGVLMWEIYSLGKM------PYERFTNSETAEHIAQGLRL----------YRPH---- 244
Query: 507 TLASVHKVAELAFRCLAFHRDMRPSM 532
LAS KV + + C D RP+
Sbjct: 245 -LAS-EKVYTIMYSCWHEKADERPTF 268
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 28/266 (10%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
+ LGTG FG V GK + VAIK IK + + E K++ +SH LV+L G
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
++ ++ E+M NG L +L RE L + + +A+ +L S HR
Sbjct: 80 TKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 135
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L++ KV+DFGLSR + + S + + P+ S KSD+
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 195
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG-RLDEIIDPLIIEHRGHSDAG 506
++FGV++ EI + K+ P E + A+ I++G RL +R H
Sbjct: 196 WAFGVLMWEIYSLGKM------PYERFTNSETAEHIAQGLRL----------YRPH---- 235
Query: 507 TLASVHKVAELAFRCLAFHRDMRPSM 532
LAS KV + + C D RP+
Sbjct: 236 -LAS-EKVYTIMYSCWHEKADERPTF 259
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 28/266 (10%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
+ LGTG FG V GK + VAIK IK + + E K++ +SH LV+L G
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
++ ++ E+M NG L +L+ R + + L + + +A+ +L S HR
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK---QFLHR 124
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L++ KV+DFGLSR + + S + + P+ S KSD+
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 184
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG-RLDEIIDPLIIEHRGHSDAG 506
++FGV++ EI + K+ P E + A+ I++G RL +R H
Sbjct: 185 WAFGVLMWEIYSLGKM------PYERFTNSETAEHIAQGLRL----------YRPH---- 224
Query: 507 TLASVHKVAELAFRCLAFHRDMRPSM 532
LAS KV + + C D RP+
Sbjct: 225 -LAS-EKVYTIMYSCWHEKADERPTF 248
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 28/266 (10%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
+ LGTG FG V GK + VAIK IK + + E K++ +SH LV+L G
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
++ ++ E+M NG L +L+ R + + L + + +A+ +L S HR
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK---QFLHR 128
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L++ KV+DFGLSR + + S + + P+ S KSD+
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 188
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG-RLDEIIDPLIIEHRGHSDAG 506
++FGV++ EI + K+ P E + A+ I++G RL +R H
Sbjct: 189 WAFGVLMWEIYSLGKM------PYERFTNSETAEHIAQGLRL----------YRPH---- 228
Query: 507 TLASVHKVAELAFRCLAFHRDMRPSM 532
LAS KV + + C D RP+
Sbjct: 229 -LAS-EKVYTIMYSCWHEKADERPTF 252
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 250 EEPIYI-VGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 305
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 363 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 397
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 84 EEPIYI-VCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 139
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 197 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 231
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 28/266 (10%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
+ LGTG FG V GK + VAIK IK + + E K++ +SH LV+L G
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
++ ++ E+M NG L +L RE L + + +A+ +L S HR
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L++ KV+DFGLSR + + S + + P+ S KSD+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG-RLDEIIDPLIIEHRGHSDAG 506
++FGV++ EI + K+ P E + A+ I++G RL +R H
Sbjct: 190 WAFGVLMWEIYSLGKM------PYERFTNSETAEHIAQGLRL----------YRPH---- 229
Query: 507 TLASVHKVAELAFRCLAFHRDMRPSM 532
LAS KV + + C D RP+
Sbjct: 230 -LAS-EKVYTIMYSCWHEKADERPTF 253
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 84 EEPIYI-VMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 139
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL E + TA QG + P+ + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARL--IEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 197 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 231
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 328 IERGEQILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + +V ++ +L HL + + + + +A +TAQ + +LH+ I
Sbjct: 102 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAK---SII 154
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRD+KS+NI L + K+ DFGL+ + SH G+ ++ P+ + DK
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 211
Query: 445 ------SDVYSFGVVLVEIITA 460
SDVY+FG+VL E++T
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTG 233
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 28/266 (10%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
+ LGTG FG V GK + VAIK IK + + E K++ +SH LV+L G
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
++ ++ E+M NG L +L RE L + + +A+ +L S HR
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
D+ + N L++ KV+DFGLSR + + S + + P+ S KSD+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 448 YSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG-RLDEIIDPLIIEHRGHSDAG 506
++FGV++ EI + K+ P E + A+ I++G RL +R H
Sbjct: 190 WAFGVLMWEIYSLGKM------PYERFTNSETAEHIAQGLRL----------YRPH---- 229
Query: 507 TLASVHKVAELAFRCLAFHRDMRPSM 532
LAS KV + + C D RP+
Sbjct: 230 -LAS-EKVYTIMYSCWHEKADERPTF 253
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 84 EEPIYI-VTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 139
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 197 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 231
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 328 IERGEQILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + +V ++ +L HL + + + + +A +TAQ + +LH+ I
Sbjct: 101 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAK---SII 153
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRD+KS+NI L + K+ DFGL+ + SH G+ ++ P+ + DK
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 210
Query: 445 ------SDVYSFGVVLVEIITA 460
SDVY+FG+VL E++T
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTG 232
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 84 EEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 139
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
+ ++NIL+ N KVADFGL+RL E + TA QG + P+ + KS
Sbjct: 140 LAAANILVGENLVCKVADFGLARL--IEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 197 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 231
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 328 IERGEQILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + +V ++ +L HL + + + + +A +TAQ + +LH+ I
Sbjct: 79 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAK---SII 131
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRD+KS+NI L + K+ DFGL+ + SH G+ ++ P+ + DK
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 188
Query: 445 ------SDVYSFGVVLVEIITA 460
SDVY+FG+VL E++T
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTG 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 328 IERGEQILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + +V ++ +L HL + + + + +A +TAQ + +LH+ I
Sbjct: 79 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAK---SII 131
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRD+KS+NI L + K+ DFGL+ + SH G+ ++ P+ + DK
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 188
Query: 445 ------SDVYSFGVVLVEIITA 460
SDVY+FG+VL E++T
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTG 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 328 IERGEQILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + +V ++ +L HL + + + + +A +TAQ + +LH+ I
Sbjct: 74 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAK---SII 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRD+KS+NI L + K+ DFGL+ + SH G+ ++ P+ + DK
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 183
Query: 445 ------SDVYSFGVVLVEIITA 460
SDVY+FG+VL E++T
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTG 205
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 328 IERGEQILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + +V ++ +L HL + + + + +A +TAQ + +LH+ I
Sbjct: 76 -TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAK---SII 128
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRD+KS+NI L + K+ DFGL+ + SH G+ ++ P+ + DK
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 185
Query: 445 ------SDVYSFGVVLVEIITA 460
SDVY+FG+VL E++T
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTG 207
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 109/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K + + + E +++ + H LV+L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + +A + A +A++ +N HRD
Sbjct: 251 EEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER-MN--YVHRD 306
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL RL + TA QG + P+ + KS
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 364 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 398
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + ++ + A +A++ +N HRD
Sbjct: 81 EEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER-MN--YVHRD 136
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIE---DNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 194 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 228
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 269 RLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+LG G FG V+ G VAIK +K T + + E +++ + H LV+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
E I V E+M G+L L+ E G L P + ++ + A +A++ +N HRD
Sbjct: 81 EEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER-MN--YVHRD 136
Query: 389 IKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQNFHLSDKS 445
++++NIL+ N KVADFGL+RL + TA QG + P+ + KS
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIE---DNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
DV+SFG++L E+ T +V P VN L D++ +G
Sbjct: 194 DVWSFGILLTELTTKGRVPY----PGMVNREVL--DQVERG 228
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 21/221 (9%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQR-ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+ L+ E+ P GT+ + LQ+ R D +T E A A+++ HS +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT---ELANALSYCHSK---RV 133
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRDIK N+LL N + K+ADFG S + S T GT YL P+ + +K
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + + PP E + RIS+
Sbjct: 191 VDLWSLGVLCYEFLVGM-------PPFEAHTYQETYRRISR 224
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
QR+G+G+FGTVY GK D+ V + + +Q NE+ ++ H N++ +G S
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 328 IERGEQILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ +V ++ +L HL + + + + +A +TAQ + +LH+ I
Sbjct: 74 TA-PQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAK---SII 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRD+KS+NI L + K+ DFGL+ + SH G+ ++ P+ + DK
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV---IRMQDK 183
Query: 445 ------SDVYSFGVVLVEIITA 460
SDVY+FG+VL E++T
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTG 205
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 135
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKV 192
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDA 505
D++S GV+ E + +PP E N RIS R++ + E G D
Sbjct: 193 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--RVEFTFPDFVTE--GARD- 240
Query: 506 GTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEH--IRTRTMEDINCTASLEAS 559
L R L + RP + EV LEH I + + NC AS
Sbjct: 241 -----------LISRLLKHNPSQRPXLREV---LEHPWITANSSKPSNCQNKESAS 282
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G FG V+ G VA+K +K + E L+ +
Sbjct: 10 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 66
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 67 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 125
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 126 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 182
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G FG V+ G VA+K +K + E L+ +
Sbjct: 9 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 65
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 125 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G FG V+ G VA+K +K + E L+ +
Sbjct: 11 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 67
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 68 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 126
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 127 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 183
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVT 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 135
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 193 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 225
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 156
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 213
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDA 505
D++S GV+ E + +PP E N RIS R++ + E G D
Sbjct: 214 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRIS--RVEFTFPDFVTE--GARD- 261
Query: 506 GTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEH--IRTRTMEDINCTASLEAS 559
L R L + RP + EV LEH I + + NC AS
Sbjct: 262 -----------LISRLLKHNPSQRPMLREV---LEHPWITANSSKPSNCQNKESAS 303
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 21/225 (9%)
Query: 267 KQRLGTGAFGTVYAGKL------QNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
K+ LG GAFG V+ + Q+ +LVA+K +K + + E +L++ + H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSW-----PIRLT------VAMET 369
V+ G +E I+V+E+M +G L + L+ D + P LT +A +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 370 AQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP 428
A + +L S HRD+ + N L+ N K+ DFG+SR + T+ +
Sbjct: 138 AAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEV 473
++ P+ + +SDV+S GVVL EI T K + NEV
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 147
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 204
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 205 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 237
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 23/219 (10%)
Query: 246 ISNIPIYPYR----EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDG 301
+S+ P P+ EI + ++ +K LG G FG V+ VA+K +K +
Sbjct: 164 MSSKPQKPWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMS 220
Query: 302 IQQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI 361
++ + E ++ + H LV+L + + ++ EFM G+L L+ + G P
Sbjct: 221 VEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK 279
Query: 362 RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS 421
+ + + A+ +A + HRD++++NIL+ + K+ADFGL+R+G +
Sbjct: 280 LIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVG-AKFPIKW 335
Query: 422 TAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
TAP+ NF + KSDV+SFG++L+EI+T
Sbjct: 336 TAPEAI----------NFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G FG V+ G VA+K +K + E L+ +
Sbjct: 18 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 74
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 75 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 133
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 134 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 190
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G FG V+ G VA+K +K + E L+ +
Sbjct: 9 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 65
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 125 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 131
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S S T GT YL P+ + +K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKV 188
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 189 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 221
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 133
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 191 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 223
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G FG V+ G VA+K +K + E L+ +
Sbjct: 9 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 65
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 125 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G FG V+ G VA+K +K + E L+ +
Sbjct: 4 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 60
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 61 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 119
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 120 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 176
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVT 200
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G FG V+ G VA+K +K + E L+ +
Sbjct: 17 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 73
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 74 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 132
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 133 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 189
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G FG V+ G VA+K +K + E L+ +
Sbjct: 14 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 70
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 71 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 129
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 130 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 186
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G FG V+ G VA+K +K + E L+ +
Sbjct: 15 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 71
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 72 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 131 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 187
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G FG V+ G VA+K +K + E L+ +
Sbjct: 15 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 71
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 72 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 131 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 187
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVT 211
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 134/298 (44%), Gaps = 52/298 (17%)
Query: 254 YREIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLIS 313
Y+EIE + +G GAFG V K + VAIK+I+ + + E++ +S
Sbjct: 8 YKEIEVEEV-------VGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLS 57
Query: 314 CVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRER-------GDGLSWPIRLTVA 366
V+HPN+V+L G + LV E+ G+L L +SW
Sbjct: 58 RVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------C 109
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRLGMTEISHISTAPQ 425
++ +Q +A+LHS + HRD+K N+LL K+ DFG + +I T +
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNK 165
Query: 426 GTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
G+ ++ P+ + + S+K DV+S+G++L E+IT K P +E+ A RI
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK------PFDEIGGPAF---RIMW 216
Query: 486 GRLDEIIDPLIIEHRGHSDAGTLASVHKVAE-LAFRCLAFHRDMRPSMTEVATELEHI 542
+ PLI ++ K E L RC + RPSM E+ + H+
Sbjct: 217 AVHNGTRPPLI------------KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 133
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S A GT YL P+ + +K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 190
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 191 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 223
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 130
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 187
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 188 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 220
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 134/298 (44%), Gaps = 52/298 (17%)
Query: 254 YREIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLIS 313
Y+EIE + +G GAFG V K + VAIK+I+ + + E++ +S
Sbjct: 7 YKEIEVEEV-------VGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLS 56
Query: 314 CVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRER-------GDGLSWPIRLTVA 366
V+HPN+V+L G + LV E+ G+L L +SW
Sbjct: 57 RVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------C 108
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRLGMTEISHISTAPQ 425
++ +Q +A+LHS + HRD+K N+LL K+ DFG + +I T +
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNK 164
Query: 426 GTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
G+ ++ P+ + + S+K DV+S+G++L E+IT K P +E+ A RI
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK------PFDEIGGPAF---RIMW 215
Query: 486 GRLDEIIDPLIIEHRGHSDAGTLASVHKVAE-LAFRCLAFHRDMRPSMTEVATELEHI 542
+ PLI ++ K E L RC + RPSM E+ + H+
Sbjct: 216 AVHNGTRPPLI------------KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 130
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKV 187
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 188 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 220
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P G + + LQ + T E A A+++ HS +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 135
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 193 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 225
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 135
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 192
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 193 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 225
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ+ T E A A+++ HS +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK---RVI 134
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 135 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 192 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 224
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 133
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 191 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 223
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G FG V+ G VA+K +K + E L+ +
Sbjct: 19 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 75
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 76 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 134
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 135 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 191
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVT 215
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 131
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 188
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 189 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 221
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 123/285 (43%), Gaps = 36/285 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHR-DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
+++G G FG V++G+L+ D LVA+K + D + + E +++ SHPN+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
++ +V E + G L+ E G L L + + A + +L S
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDK 444
HRD+ + N L+ K++DFG+SR + S + P + P+ S +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHRGHSD 504
SDV+SFG++L E + L A +S + E ++
Sbjct: 296 SDVWSFGILLWETFS---------------LGASPYPNLSNQQTREFVE----------K 330
Query: 505 AGTLASVHKVAELAFR----CLAFHRDMRPSMTEVATELEHIRTR 545
G L + FR C A+ RPS + + EL+ IR R
Sbjct: 331 GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 7/207 (3%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLI 312
P E+ + T+ E RLG G FG V+ G VA+K +K + E L+
Sbjct: 2 PEWEVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLM 58
Query: 313 SCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQA 372
+ H LVRL + I+ E+M NG+L L+ G L+ L +A + A+
Sbjct: 59 KQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 117
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLD 432
+A + HR+++++NIL+ K+ADFGL+RL + +
Sbjct: 118 MAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 174
Query: 433 PQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P+ + KSDV+SFG++L EI+T
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 130
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 188 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 220
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 29/225 (12%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQR-ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+ L+ E+ P GT+ + LQ+ R D +T E A A+++ HS +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT---ELANALSYCHSK---RV 133
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ----GTPGYLDPQYHQNFH 440
HRDIK N+LL N + K+ADFG S H ++ + GT YL P+ +
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPPEMIEGRM 186
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
+K D++S GV+ E + + PP E + RIS+
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGM-------PPFEAHTYQETYRRISR 224
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 129
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 130 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 186
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 187 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 219
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 130
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 188 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 220
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQR-ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+ L+ E+ P GT+ + LQ+ + D T E A A+++ HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR---TATYITELANALSYCHSK---RV 129
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRDIK N+LL + K+ADFG S + S A GT YL P+ + +K
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 187 VDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 220
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 21/221 (9%)
Query: 270 LGTGAFGTVYAGKLQND-LLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY + +N ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQR-ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+ L+ E+ P GT+ + LQ+ + D T E A A+++ HS +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQR---TATYITELANALSYCHSK---KV 129
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRDIK N+LL + K+ADFG S + S A GT YL P+ + +K
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 187 VDLWSLGVLCYEFLVG-------KPPFEANTYQDTYKRISR 220
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQR-ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+ L+ E+ P GT+ + LQ+ + D T E A A+++ HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR---TATYITELANALSYCHSK---RV 129
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEK 186
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 187 VDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 220
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 129
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 247 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 123/285 (43%), Gaps = 36/285 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHR-DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
+++G G FG V++G+L+ D LVA+K + D + + E +++ SHPN+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
++ +V E + G L+ E G L L + + A + +L S
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDK 444
HRD+ + N L+ K++DFG+SR + S + P + P+ S +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHRGHSD 504
SDV+SFG++L E + L A +S + E ++
Sbjct: 296 SDVWSFGILLWETFS---------------LGASPYPNLSNQQTREFVE----------K 330
Query: 505 AGTLASVHKVAELAFR----CLAFHRDMRPSMTEVATELEHIRTR 545
G L + FR C A+ RPS + + EL+ IR R
Sbjct: 331 GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 127
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S T GT YL P+ + +K
Sbjct: 128 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 184
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 185 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 217
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 136/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
++LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ EF+P G+L ++LQ +ER D + + T+Q +
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERID------HIKLLQYTSQICKGMEY 132
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 249
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 250 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 147
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 264
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 265 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 129
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 247 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 132
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 249
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 250 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 136
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 137 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 253
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 254 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 297
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 129
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 247 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 136/289 (47%), Gaps = 23/289 (7%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 160
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIRTR 545
R G ++ + C + + RPS ++A ++ IR +
Sbjct: 278 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIRDQ 323
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 128
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 129 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 245
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 246 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 289
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 134
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 135 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 251
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 252 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 295
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 135
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 136 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 252
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 253 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 296
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 136/289 (47%), Gaps = 23/289 (7%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 127
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 128 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 244
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIRTR 545
R G ++ + C + + RPS ++A ++ IR +
Sbjct: 245 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIRDQ 290
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 133
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 134 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 250
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 251 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 294
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 147
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 264
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 265 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P G + + LQ + T E A A+++ HS +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 135
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S GT YL P+ + +K
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKV 192
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 193 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 225
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 270 LGTGAFGTVYAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
LG G +G VYAG+ L N + +AIK I RD+ Q + EI L + H N+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR---LTVAMETAQAIAHLHSAINPPIY 385
E G + E +P G+L L+ + G P++ T+ T Q + L + I
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWG-----PLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 386 HRDIKSSNILLD-YNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRDIK N+L++ Y+ K++DFG S+ + I+ + GT Y+ P+ + DK
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKR-LAGINPCTETFTGTLQYMAPE------IIDK 197
Query: 445 --------SDVYSFGVVLVEIITA 460
+D++S G ++E+ T
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATG 221
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 132
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ----GTPGYLDPQYHQNFHL 441
HRDIK N+LL + K+ADFG S H ++ + GT YL P+ +
Sbjct: 133 HRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPPEMIEGRMH 185
Query: 442 SDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
+K D++S GV+ E + +PP E N RIS+
Sbjct: 186 DEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 222
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 132
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+A+FG S + S T GT YL P+ + +K
Sbjct: 133 HRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 189
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 190 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 222
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 20/219 (9%)
Query: 268 QRLGTGAFGTVYAGKLQND---LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLL 324
Q++G G+FG K D ++ I + ++ E+ +++ + HPN+V+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
E G +V ++ G L + + ++G L ++ A+ H+H + I
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKI 146
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRDIKS NI L + ++ DFG++R+ + ++ A GTP YL P+ +N ++K
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARV-LNSTVELARACIGTPYYLSPEICENKPYNNK 205
Query: 445 SDVYSFGVVLVEIIT-------------ALKVVDFSRPP 470
SD+++ G VL E+ T LK++ S PP
Sbjct: 206 SDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP 244
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 14/204 (6%)
Query: 265 SEKQRLGTGAFGTVYAGKLQN-----DLLVAIKRIKHRDTDGIQQV--VNEIKLISCVSH 317
+ ++ +G G FG VY G L+ ++ VAIK +K T+ Q+V + E ++ SH
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK-QRVDFLGEAGIMGQFSH 105
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
N++RL G + +++ E+M NG L + L+ + G+ + + V M A A +
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE---FSVLQLVGMLRGIA-AGMK 161
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQY 435
N HRD+ + NIL++ N KV+DFGLSR+ E ++ ++ + + P+
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ SDV+SFG+V+ E++T
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 20/283 (7%)
Query: 269 RLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRL 323
+LG G FG+V + LVA+K+++H D + EI+++ + +V+
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 324 LGCSIERGEQIL--VYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G S G Q L V E++P+G L LQR R L L + + + + +L S
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGSRR- 134
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQNF 439
HRD+ + NIL++ K+ADFGL++ L + + ++ P +P + P+ +
Sbjct: 135 --CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 192
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEH 499
S +SDV+SFGVVL E+ T D S P+ L + ++R L +++ L
Sbjct: 193 IFSRQSDVWSFGVVLYELFT---YCDKSCSPSAEFLRMMGSERDVPA-LSRLLELLEEGQ 248
Query: 500 RGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
R + A VH++ +L C A RPS + + +L+ +
Sbjct: 249 RLPAPPACPAEVHELMKL---CWAPSPQDRPSFSALGPQLDML 288
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 131
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ----GTPGYLDPQYHQNFHL 441
HRDIK N+LL + K+ADFG S H ++ + GT YL P+ +
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPPEMIEGRMH 184
Query: 442 SDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
+K D++S GV+ E + +PP E N RIS+
Sbjct: 185 DEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 221
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKR---VI 156
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ----GTPGYLDPQYHQNFHL 441
HRDIK N+LL + K+ADFG S H ++ + GT YL P+ +
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYLPPEMIEGRMH 209
Query: 442 SDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
+K D++S GV+ E + +PP E N RIS+
Sbjct: 210 DEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 246
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 270 LGTGAFGTVYAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
LG G +G VYAG+ L N + +AIK I RD+ Q + EI L + H N+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR---LTVAMETAQAIAHLHSAINPPIY 385
E G + E +P G+L L+ + G P++ T+ T Q + L + I
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWG-----PLKDNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 386 HRDIKSSNILLD-YNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRDIK N+L++ Y+ K++DFG S+ + I+ + GT Y+ P+ + DK
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKR-LAGINPCTETFTGTLQYMAPE------IIDK 183
Query: 445 --------SDVYSFGVVLVEIITA 460
+D++S G ++E+ T
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATG 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 19/220 (8%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 133
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+A+FG S + S T GT YL P+ + +K
Sbjct: 134 HRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 446 DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
D++S GV+ E + +PP E N RIS+
Sbjct: 191 DLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 223
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ + T E A A+++ HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK---RVI 133
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ----GTPGYLDPQYHQNFHL 441
HRDIK N+LL + K+ADFG S H ++ + GT YL P+ +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPPEMIEGRMH 186
Query: 442 SDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
+K D++S GV+ E + +PP E N RIS+
Sbjct: 187 DEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 223
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 20/283 (7%)
Query: 269 RLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRL 323
+LG G FG+V + LVA+K+++H D + EI+++ + +V+
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 324 LGCSIERGEQIL--VYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G S G Q L V E++P+G L LQR R L L + + + + +L S
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGSRR- 147
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQNF 439
HRD+ + NIL++ K+ADFGL++ L + + ++ P +P + P+ +
Sbjct: 148 --CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEH 499
S +SDV+SFGVVL E+ T D S P+ L + +R L +++ L
Sbjct: 206 IFSRQSDVWSFGVVLYELFT---YCDKSCSPSAEFLRMMGCERDVPA-LSRLLELLEEGQ 261
Query: 500 RGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
R + A VH++ +L C A RPS + + +L+ +
Sbjct: 262 RLPAPPACPAEVHELMKL---CWAPSPQDRPSFSALGPQLDML 301
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 29/225 (12%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQR-ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+ L+ E+ P GT+ + LQ+ + D T E A A+++ HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR---TATYITELANALSYCHSK---RV 129
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ----GTPGYLDPQYHQNFH 440
HRDIK N+LL + K+ADFG S H ++ + GT YL P+ +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
+K D++S GV+ E + +PP E N RIS+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 220
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ +ER D + + T+Q +
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID------HIKLLQYTSQICKGMEY 130
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG--YLDPQYH 436
HR++ + NIL++ + K+ DFGL+++ + + G + P+
Sbjct: 131 LGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 247
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 248 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 291
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + Q+ ++A+K + + G++ Q+ E+++ S + HPN++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ L+ E+ P GT+ + LQ+ T E A A+++ HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK---RVI 133
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ----GTPGYLDPQYHQNFHL 441
HRDIK N+LL + K+ADFG S H ++ + GT YL P+ +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYLPPEMIEGRMH 186
Query: 442 SDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
+K D++S GV+ E + +PP E N RIS+
Sbjct: 187 DEKVDLWSLGVLCYEFLVG-------KPPFEANTYQETYKRISR 223
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 134/287 (46%), Gaps = 23/287 (8%)
Query: 268 QRLGTGAFGTVYAGK---LQNDL--LVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
Q+LG G FG+V + LQ++ +VA+K+++H + ++ EI+++ + H N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 323 LLGCSIERGEQ--ILVYEFMPNGTLCQHLQ--RERGDGLSWPIRLTVAMETAQAIAHLHS 378
G G + L+ E++P G+L +LQ ER D + + T+Q +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERID------HIKLLQYTSQICKGMEY 132
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYH 436
HRD+ + NIL++ + K+ DFGL+++ E + + + P+
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLI 496
S SDV+SFGVVL E+ T ++ S+ P + + D+ + + +I+ L
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 249
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIR 543
R G ++ + C + + RPS ++A ++ IR
Sbjct: 250 NNGRLPRPDGCPDEIYMIMT---ECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 147/311 (47%), Gaps = 39/311 (12%)
Query: 255 REIEKATIGFSEKQRLGTGAFGTVYAGKL----QNDLLVAIKRIKHRDTDGIQQ-VVNEI 309
REIE + I ++ +G+G G V G+L Q D+ VAIK +K T+ ++ ++E
Sbjct: 44 REIEASRIHI--EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA 101
Query: 310 KLISCVSHPNLVRLLGCSIERGE-QILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ HPN++RL G + RG ++V E+M NG+L L+ DG ++L +
Sbjct: 102 SIMGQFDHPNIIRLEGV-VTRGRLAMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLR 158
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQG 426
A S + HRD+ + N+L+D N KV+DFGLSR+ + ++ +T +
Sbjct: 159 GVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI 216
Query: 427 TPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRP-PNEVNLAALAADRISK 485
+ P+ S SDV+SFGVV+ E++ + RP N N +++
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE-----RPYWNMTNRDVISS----- 266
Query: 486 GRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIRTR 545
+E G+ + H + +L C R RP +++ + L+ + R
Sbjct: 267 -----------VEE-GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL-IR 313
Query: 546 TMEDINCTASL 556
+ E + TA++
Sbjct: 314 SPESLRATATV 324
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 29/241 (12%)
Query: 267 KQRLGTGAFGTVYAGKL------QNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
K LG GAFG V+ + Q+ +LVA+K +K Q E +L++ + H ++
Sbjct: 17 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDG-------------LSWPIRLTVAM 367
VR G E ++V+E+M +G L + L+ D L L VA
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 368 ETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQG 426
+ A + +L HRD+ + N L+ K+ DFG+SR + T+ +
Sbjct: 137 QVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 427 TPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
++ P+ + +SDV+SFGVVL EI T K + E A D I++G
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------AIDCITQG 247
Query: 487 R 487
R
Sbjct: 248 R 248
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 29/241 (12%)
Query: 267 KQRLGTGAFGTVYAGKL------QNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
K LG GAFG V+ + Q+ +LVA+K +K Q E +L++ + H ++
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDG-------------LSWPIRLTVAM 367
VR G E ++V+E+M +G L + L+ D L L VA
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 368 ETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQG 426
+ A + +L HRD+ + N L+ K+ DFG+SR + T+ +
Sbjct: 166 QVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 427 TPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
++ P+ + +SDV+SFGVVL EI T K + E A D I++G
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------AIDCITQG 276
Query: 487 R 487
R
Sbjct: 277 R 277
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 29/241 (12%)
Query: 267 KQRLGTGAFGTVYAGKL------QNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
K LG GAFG V+ + Q+ +LVA+K +K Q E +L++ + H ++
Sbjct: 23 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 82
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDG-------------LSWPIRLTVAM 367
VR G E ++V+E+M +G L + L+ D L L VA
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 368 ETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQG 426
+ A + +L HRD+ + N L+ K+ DFG+SR + T+ +
Sbjct: 143 QVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 427 TPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
++ P+ + +SDV+SFGVVL EI T K + E A D I++G
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE------AIDCITQG 253
Query: 487 R 487
R
Sbjct: 254 R 254
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 22/205 (10%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + QN ++A+K + + +G++ Q+ EI++ S + HPN++R+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRE-RGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+R L+ EF P G L + LQ+ R D T E A A+ + H +
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR---SATFMEELADALHYCHER---KV 136
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ----GTPGYLDPQYHQNFH 440
HRDIK N+L+ Y + K+ADFG S H + + GT YL P+ +
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEMIEGKT 189
Query: 441 LSDKSDVYSFGVVLVEIITALKVVD 465
+K D++ GV+ E + + D
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 22/205 (10%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + QN ++A+K + + +G++ Q+ EI++ S + HPN++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRE-RGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+R L+ EF P G L + LQ+ R D T E A A+ + H +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR---SATFMEELADALHYCHER---KV 135
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ----GTPGYLDPQYHQNFH 440
HRDIK N+L+ Y + K+ADFG S H + + GT YL P+ +
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEMIEGKT 188
Query: 441 LSDKSDVYSFGVVLVEIITALKVVD 465
+K D++ GV+ E + + D
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 22/205 (10%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + QN ++A+K + + +G++ Q+ EI++ S + HPN++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRE-RGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+R L+ EF P G L + LQ+ R D T E A A+ + H +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR---SATFMEELADALHYCHER---KV 135
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ----GTPGYLDPQYHQNFH 440
HRDIK N+L+ Y + K+ADFG S H + + GT YL P+ +
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLPPEMIEGKT 188
Query: 441 LSDKSDVYSFGVVLVEIITALKVVD 465
+K D++ GV+ E + + D
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 267 KQRLGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLV 321
+Q +G G FG V +G L+ ++ VAIK +K T+ ++ ++E ++ HPN++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
L G + +++ EFM NG+L L++ DG I+L + A + +N
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLADMN 155
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRL---GMTEISHISTAPQGTP-GYLDPQYHQ 437
HRD+ + NIL++ N KV+DFGLSR ++ ++ S P + P+ Q
Sbjct: 156 --YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+V+ E+++
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMS 235
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 20/283 (7%)
Query: 269 RLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRL 323
+LG G FG+V + LVA+K+++H D + EI+++ + +V+
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 324 LGCSIERGEQIL--VYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G S G Q L V E++P+G L LQR R L L + + + + +L S
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGSRR- 135
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQNF 439
HRD+ + NIL++ K+ADFGL++ L + + ++ P +P + P+ +
Sbjct: 136 --CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 193
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEH 499
S +SDV+SFGVVL E+ T D S P+ L + +R L +++ L
Sbjct: 194 IFSRQSDVWSFGVVLYELFT---YCDKSCSPSAEFLRMMGCERDVPA-LCRLLELLEEGQ 249
Query: 500 RGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
R + A VH++ +L C A RPS + + +L+ +
Sbjct: 250 RLPAPPACPAEVHELMKL---CWAPSPQDRPSFSALGPQLDML 289
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 7/204 (3%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
E+ + T+ E RLG G G V+ G VA+K +K + E L+ +
Sbjct: 9 EVPRETLKLVE--RLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 65
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
H LVRL + I+ E+M NG+L L+ G L+ L +A + A+ +A
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ HRD++++NIL+ K+ADFGL+RL + + P+
Sbjct: 125 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEA 181
Query: 436 HQNFHLSDKSDVYSFGVVLVEIIT 459
+ KSDV+SFG++L EI+T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ D+ VAIK +K T+ ++ + E ++ HPN+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 325 GCSIERGEQIL-VYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G + RG+ ++ V EFM NG L L++ DG I+L V M A A + +
Sbjct: 111 GV-VTRGKPVMIVIEFMENGALDAFLRKH--DGQFTVIQL-VGMLRGIA-AGMRYLADMG 165
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGLSR+ E + +T + + P+ Q
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+V+ E+++
Sbjct: 226 TSASDVWSYGIVMWEVMS 243
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 144/311 (46%), Gaps = 39/311 (12%)
Query: 255 REIEKATIGFSEKQRLGTGAFGTVYAGKL----QNDLLVAIKRIKHRDTDGIQQ-VVNEI 309
REIE + I ++ +G+G G V G+L Q D+ VAIK +K T+ ++ ++E
Sbjct: 44 REIEASRIHI--EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA 101
Query: 310 KLISCVSHPNLVRLLGCSIERGE-QILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
++ HPN++RL G + RG ++V E+M NG+L L+ DG ++L +
Sbjct: 102 SIMGQFDHPNIIRLEGV-VTRGRLAMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLR 158
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
A S + HRD+ + N+L+D N KV+DFGLSR+ + T G
Sbjct: 159 GVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI 216
Query: 429 G--YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRP-PNEVNLAALAADRISK 485
+ P+ S SDV+SFGVV+ E++ + RP N N +++
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE-----RPYWNMTNRDVISS----- 266
Query: 486 GRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHIRTR 545
+E G+ + H + +L C R RP +++ + L+ + R
Sbjct: 267 -----------VEE-GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL-IR 313
Query: 546 TMEDINCTASL 556
+ E + TA++
Sbjct: 314 SPESLRATATV 324
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 29/203 (14%)
Query: 270 LGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSH 317
LGTG+FG V YA K L+ +++V +K+++H + +E ++S V+H
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN--------DERLMLSIVTH 65
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P ++R+ G + + ++ +++ G L L++ + P+ A E A+ +LH
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR--FPNPVAKFYAAEVCLALEYLH 123
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
S I +RD+K NILLD N K+ DFG ++ + ++ GTP Y+ P+
Sbjct: 124 SK---DIIYRDLKPENILLDKNGHIKITDFGFAKY----VPDVTYXLCGTPDYIAPEVVS 176
Query: 438 NFHLSDKSDVYSFGVVLVEIITA 460
+ D +SFG+++ E++
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 22/202 (10%)
Query: 270 LGTGAFGTVYAGKLQND-----LLVAIKRIKHRDT-DGIQQVVNEIKLISCVSHPNLVRL 323
LG+GAFGTVY G D + VAIK ++ + +++++E +++ V P + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERG-----DGLSWPIRLTVAMETAQAIAHLHS 378
LG + Q LV + MP G L H++ RG D L+W M+ A+ +++L
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYLED 137
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYHQ 437
+ HRD+ + N+L+ K+ DFGL+R L + E + + + ++ +
Sbjct: 138 V---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ +SDV+S+GV + E++T
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMT 216
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 44/287 (15%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + +L S
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK---K 145
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS----TAPQGTPGYLDPQYHQNF 439
HRD+ + N +LD F KVADFGL+R M + + S T + ++ + Q
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPL 495
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 205 KFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 258
Query: 496 IIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 259 Y-------------------EVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 44/287 (15%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + +L S
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK---K 153
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS----TAPQGTPGYLDPQYHQNF 439
HRD+ + N +LD F KVADFGL+R M + + S T + ++ + Q
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPL 495
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 213 KFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
Query: 496 IIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 267 Y-------------------EVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 44/287 (15%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + +L S
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK---K 148
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS----TAPQGTPGYLDPQYHQNF 439
HRD+ + N +LD F KVADFGL+R M + + S T + ++ + Q
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 207
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPL 495
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 208 KFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 261
Query: 496 IIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 262 Y-------------------EVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 44/287 (15%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + +L S
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK---K 151
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS----TAPQGTPGYLDPQYHQNF 439
HRD+ + N +LD F KVADFGL+R M + + S T + ++ + Q
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 210
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPL 495
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 211 KFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 264
Query: 496 IIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 265 Y-------------------EVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 44/287 (15%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + +L S
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK---K 171
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS----TAPQGTPGYLDPQYHQNF 439
HRD+ + N +LD F KVADFGL+R M + + S T + ++ + Q
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPL 495
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 231 KFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 284
Query: 496 IIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 285 Y-------------------EVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
Query: 267 KQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGC 326
+++LG G FG V+ VA+K +K + ++ + E ++ + H LV+L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 327 SIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYH 386
+ + ++ EFM G+L L+ + G P + + + A+ +A + H
Sbjct: 79 -VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIH 134
Query: 387 RDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSD 446
RD++++NIL+ + K+ADFGL+R+ + + P+ + KSD
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 194
Query: 447 VYSFGVVLVEIIT 459
V+SFG++L+EI+T
Sbjct: 195 VWSFGILLMEIVT 207
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 44/287 (15%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + +L S
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK---K 153
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS----TAPQGTPGYLDPQYHQNF 439
HRD+ + N +LD F KVADFGL+R M + + S T + ++ + Q
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPL 495
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 213 KFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 266
Query: 496 IIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 267 Y-------------------EVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 44/287 (15%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + +L S
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK---K 150
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS----TAPQGTPGYLDPQYHQNF 439
HRD+ + N +LD F KVADFGL+R M + + S T + ++ + Q
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPL 495
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 210 KFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 263
Query: 496 IIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 264 Y-------------------EVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 44/287 (15%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + +L S
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK---K 172
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS----TAPQGTPGYLDPQYHQNF 439
HRD+ + N +LD F KVADFGL+R M + + S T + ++ + Q
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPL 495
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 232 KFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 285
Query: 496 IIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 286 -------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 44/287 (15%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + +L S
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK---K 152
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS----TAPQGTPGYLDPQYHQNF 439
HRD+ + N +LD F KVADFGL+R M + + S T + ++ + Q
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 211
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPL 495
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 212 KFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 265
Query: 496 IIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 266 Y-------------------EVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 36/219 (16%)
Query: 270 LGTGAFGTVYAGK---LQND-----LLVAIKRIKHRDTD-GIQQVVNEIKLISCV-SHPN 319
LG GAFG V + L D VA+K +K T+ + +++E++++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTV 365
++ LLG + G ++ E+ G L ++LQ R GL + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 366 AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ 425
A + A+ + +L S HRD+ + N+L+ + K+ADFGL+R +I HI +
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXKK 208
Query: 426 GTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
T G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 44/287 (15%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + +L S
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK---K 152
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEIS----HISTAPQGTPGYLDPQYHQNF 439
HRD+ + N +LD F KVADFGL+R M + H T + ++ + Q
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPL 495
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 212 KFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL 265
Query: 496 IIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 266 Y-------------------EVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 246 ISNIPIYPYR----EIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDG 301
+S+ P P+ EI + ++ +K LG G FG V+ VA+K +K +
Sbjct: 170 MSSKPQKPWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMS 226
Query: 302 IQQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI 361
++ + E ++ + H LV+L + + ++ EFM G+L L+ + G P
Sbjct: 227 VEAFLAEANVMKTLQHDKLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK 285
Query: 362 RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS 421
+ + + A+ +A + HRD++++NIL+ + K+ADFGL+R+
Sbjct: 286 LIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342
Query: 422 TAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ + P+ + KSDV+SFG++L+EI+T
Sbjct: 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 127/286 (44%), Gaps = 42/286 (14%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + L S
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK---K 154
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMT---EISHISTAPQGTPGYLDPQYHQNFH 440
HRD+ + N +LD F KVADFGL+R + + H T + ++ + Q
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPLI 496
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 215 FTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 268
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 269 -------------------EVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 20/283 (7%)
Query: 269 RLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRL 323
+LG G FG+V + LVA+K+++H D + EI+++ + +V+
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 324 LGCSIERG--EQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G S G E LV E++P+G L LQR R L L + + + + +L S
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICKGMEYLGSRR- 131
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQNF 439
HRD+ + NIL++ K+ADFGL++ L + + + P +P + P+ +
Sbjct: 132 --CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEH 499
S +SDV+SFGVVL E+ T D S P+ L + +R L +++ L
Sbjct: 190 IFSRQSDVWSFGVVLYELFT---YCDKSCSPSAEFLRMMGCERDVPA-LCRLLELLEEGQ 245
Query: 500 RGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
R + A VH++ +L C A RPS + + +L+ +
Sbjct: 246 RLPAPPACPAEVHELMKL---CWAPSPQDRPSFSALGPQLDML 285
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 36/219 (16%)
Query: 270 LGTGAFGTVYAGK---LQND-----LLVAIKRIKHRDTD-GIQQVVNEIKLISCV-SHPN 319
LG GAFG V + L D VA+K +K T+ + +++E++++ + H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTV 365
++ LLG + G ++ E+ G L ++LQ R GL + ++
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 366 AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ 425
A + A+ + +L S HRD+ + N+L+ + K+ADFGL+R +I HI +
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 197
Query: 426 GTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
T G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 42/286 (14%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + L S
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK---K 154
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEIS--HISTAPQGTPGYLDPQYHQNFH 440
HRD+ + N +LD F KVADFGL+R + E H T + ++ + Q
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPLI 496
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 215 FTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 268
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 269 -------------------EVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 268 QRLGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVR 322
+ +G G FG VY G L ND + A+K + D + Q + E ++ SHPN++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 323 LLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
LLG C G ++V +M +G L ++ E + + + ++ A+ + L S
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK-- 211
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEIS--HISTAPQGTPGYLDPQYHQN 438
HRD+ + N +LD F KVADFGL+R + E H T + ++ + Q
Sbjct: 212 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 439 FHLSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDP 494
+ KSDV+SFGV+L E++T PP +VN + + RL + DP
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 324
Query: 495 LIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
L E+ +C +MRPS +E+ + + I
Sbjct: 325 LY-------------------EVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 42/286 (14%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + L S
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK---K 153
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEIS--HISTAPQGTPGYLDPQYHQNFH 440
HRD+ + N +LD F KVADFGL+R + E H T + ++ + Q
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPLI 496
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 214 FTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 267
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 268 -------------------EVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 36/219 (16%)
Query: 270 LGTGAFGTVYAGK---LQND-----LLVAIKRIKHRDTD-GIQQVVNEIKLISCV-SHPN 319
LG GAFG V + L D VA+K +K T+ + +++E++++ + H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTV 365
++ LLG + G ++ E+ G L ++LQ R GL + ++
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 366 AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ 425
A + A+ + +L S HRD+ + N+L+ + K+ADFGL+R +I HI +
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 201
Query: 426 GTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
T G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 36/219 (16%)
Query: 270 LGTGAFGTVYAGK---LQND-----LLVAIKRIKHRDTD-GIQQVVNEIKLISCV-SHPN 319
LG GAFG V + L D VA+K +K T+ + +++E++++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTV 365
++ LLG + G ++ E+ G L ++LQ R GL + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 366 AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ 425
A + A+ + +L S HRD+ + N+L+ + K+ADFGL+R +I HI +
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 426 GTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
T G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 42/286 (14%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + L S
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK---K 151
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEIS--HISTAPQGTPGYLDPQYHQNFH 440
HRD+ + N +LD F KVADFGL+R + E H T + ++ + Q
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 211
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPLI 496
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 212 FTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 265
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 266 -------------------EVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 42/286 (14%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + L S
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK---K 158
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEIS--HISTAPQGTPGYLDPQYHQNFH 440
HRD+ + N +LD F KVADFGL+R + E H T + ++ + Q
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 218
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPLI 496
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 219 FTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 272
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 273 -------------------EVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 36/219 (16%)
Query: 270 LGTGAFGTVYAGK---LQND-----LLVAIKRIKHRDTD-GIQQVVNEIKLISCV-SHPN 319
LG GAFG V + L D VA+K +K T+ + +++E++++ + H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTV 365
++ LLG + G ++ E+ G L ++LQ R GL + ++
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 366 AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ 425
A + A+ + +L S HRD+ + N+L+ + K+ADFGL+R +I HI +
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 249
Query: 426 GTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
T G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 13/212 (6%)
Query: 255 REIEKATIGFSEKQRLGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEI 309
+EIE + I ++ +G G FG V +G+L+ +L VAIK +K T+ ++ + E
Sbjct: 17 KEIEASCITI--ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEA 74
Query: 310 KLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET 369
++ HPN++ L G + ++V E+M NG+L L++ DG I+L +
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKK--NDGQFTVIQLVGMLRG 132
Query: 370 AQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGT 427
A S + HRD+ + NIL++ N KV+DFGLSR+ E ++ + +
Sbjct: 133 ISAGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
Query: 428 PGYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P+ + SDV+S+G+V+ E+++
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 270 LGTGAFGTVYAGKLQNDLL---VAIKRIK-------HRDTDGIQQVVNEIKLISCVSHPN 319
+G G FG V +++ D L AIKR+K HRD G +V L HPN
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-----LCKLGHHPN 87
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRER--------------GDGLSWPIRLTV 365
++ LLG RG L E+ P+G L L++ R LS L
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 366 AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ 425
A + A+ + +L HRD+ + NIL+ N+ +K+ADFGLSR E+ T +
Sbjct: 148 AADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGR 202
Query: 426 GTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
++ + + SDV+S+GV+L EI++
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 36/219 (16%)
Query: 270 LGTGAFGTVYAGK---LQND-----LLVAIKRIKHRDTD-GIQQVVNEIKLISCV-SHPN 319
LG GAFG V + L D VA+K +K T+ + +++E++++ + H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTV 365
++ LLG + G ++ E+ G L ++LQ R GL + ++
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 366 AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ 425
A + A+ + +L S HRD+ + N+L+ + K+ADFGL+R +I HI +
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 200
Query: 426 GTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
T G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 34/214 (15%)
Query: 270 LGTGAFGTVYAGKLQNDLL---VAIKRIK-------HRDTDGIQQVVNEIKLISCVSHPN 319
+G G FG V +++ D L AIKR+K HRD G +V+ ++ HPN
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPN 77
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRER--------------GDGLSWPIRLTV 365
++ LLG RG L E+ P+G L L++ R LS L
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 366 AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ 425
A + A+ + +L HRD+ + NIL+ N+ +K+ADFGLSR E+ T +
Sbjct: 138 AADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGR 192
Query: 426 GTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
++ + + SDV+S+GV+L EI++
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 42/286 (14%)
Query: 270 LGTGAFGTVYAGKL-QND---LLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G L ND + A+K + D + Q + E ++ SHPN++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 325 G-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G C G ++V +M +G L ++ E + + + ++ A+ + L S
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASK---K 153
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEIS--HISTAPQGTPGYLDPQYHQNFH 440
HRD+ + N +LD F KVADFGL+R + E H T + ++ + Q
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPN-EVNLAALAADRISKGRL---DEIIDPLI 496
+ KSDV+SFGV+L E++T PP +VN + + RL + DPL
Sbjct: 214 FTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY 267
Query: 497 IEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
E+ +C +MRPS +E+ + + I
Sbjct: 268 -------------------EVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG GAFG V K + + VA+K +K T+ + +V+E
Sbjct: 35 DKLTLG----KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
++++ + H N++ LLG + G ++ E+ G L ++L+ R G+ + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 368 E-----------TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTE 416
E T Q + + HRD+ + N+L+ N K+ADFGL+R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----D 206
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
I++I + T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 269 RLGTGAFGTVY-AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
LG GAFG VY A + +L A K I + + ++ + EI +++ HPN+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 328 IERGEQILVYEFMPNGTL-CQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYH 386
++ EF G + L+ ER L+ V +T A+ +LH + I H
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 387 RDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY-----HQNFHL 441
RD+K+ NIL + K+ADFG+S I + GTP ++ P+ ++
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF-IGTPYWMAPEVVMCETSKDRPY 217
Query: 442 SDKSDVYSFGVVLVEI 457
K+DV+S G+ L+E+
Sbjct: 218 DYKADVWSLGITLIEM 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 267 KQRLGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLV 321
+Q +G G FG V +G L+ ++ VAIK +K T+ ++ ++E ++ HPN++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
L G + +++ EFM NG+L L+ + DG I+L + A + +N
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLR--QNDGQFTVIQLVGMLRGIAAGMKYLADMN 129
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRL---GMTEISHISTAPQGTP-GYLDPQYHQ 437
HR + + NIL++ N KV+DFGLSR ++ ++ S P + P+ Q
Sbjct: 130 --YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+V+ E+++
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS 209
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 269 RLGTGAFGTVY-AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
LG GAFG VY A + +L A K I + + ++ + EI +++ HPN+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 328 IERGEQILVYEFMPNGTL-CQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYH 386
++ EF G + L+ ER L+ V +T A+ +LH + I H
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 387 RDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY-----HQNFHL 441
RD+K+ NIL + K+ADFG+S I + GTP ++ P+ ++
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF-IGTPYWMAPEVVMCETSKDRPY 217
Query: 442 SDKSDVYSFGVVLVEI 457
K+DV+S G+ L+E+
Sbjct: 218 DYKADVWSLGITLIEM 233
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 135/297 (45%), Gaps = 56/297 (18%)
Query: 268 QRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNL 320
+ LG G+FG VY G K + + VA+K + + + + +NE ++ + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------LTVAMETAQA 372
VRLLG + ++V E M +G L +L+ R + + P R + +A E A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG--- 429
+A+L++ HRD+ + N ++ ++F K+ DFG++R +I +G G
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLP 195
Query: 430 --YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
++ P+ ++ + SD++SFGVVL EI + A++ +G
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------------LAEQPYQGL 236
Query: 488 LDEIIDPLIIEHRGHSDAGTLAS----VHKVAELAFRCLAFHRDMRPSMTEVATELE 540
+E + ++ D G L +V +L C F+ +MRP+ E+ L+
Sbjct: 237 SNEQVLKFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 36/219 (16%)
Query: 270 LGTGAFGTVYAGK---LQND-----LLVAIKRIKHRDTD-GIQQVVNEIKLISCV-SHPN 319
LG GAFG V + L D VA+K +K T+ + +++E++++ + H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTV 365
++ LLG + G ++ E+ G L ++LQ R GL + ++
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 366 AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ 425
A + A+ + +L S HRD+ + N+L+ + K+ADFGL+R +I HI +
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 193
Query: 426 GTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
T G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 30/245 (12%)
Query: 267 KQRLGTGAFGTVYAGKLQN------DLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
K+ LG GAFG V+ + N +LVA+K +K + E +L++ + H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQ--------------RERGDGLSWPIRLTVA 366
V+ G + I+V+E+M +G L + L+ R+ L L +A
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQ 425
+ A + +L S HRD+ + N L+ N K+ DFG+SR + T+ +
Sbjct: 140 SQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 426 GTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
++ P+ + +SDV+SFGV+L EI T K F EV + I++
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV------IECITQ 250
Query: 486 GRLDE 490
GR+ E
Sbjct: 251 GRVLE 255
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 41/243 (16%)
Query: 244 RGISNIP---IYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLL---VAIKRIK-- 295
R + N P IYP ++ I F + +G G FG V +++ D L AIKR+K
Sbjct: 5 RKVKNNPDPTIYPV--LDWNDIKFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEY 60
Query: 296 -----HRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQ 350
HRD G +V L HPN++ LLG RG L E+ P+G L L+
Sbjct: 61 ASKDDHRDFAGELEV-----LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR 115
Query: 351 RER--------------GDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILL 396
+ R LS L A + A+ + +L HR++ + NIL+
Sbjct: 116 KSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILV 172
Query: 397 DYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVE 456
N+ +K+ADFGLSR E+ T + ++ + + SDV+S+GV+L E
Sbjct: 173 GENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 230
Query: 457 IIT 459
I++
Sbjct: 231 IVS 233
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG GAFG V K + + VA+K +K T+ + +V+E
Sbjct: 35 DKLTLG----KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
++++ + H N++ LLG + G ++ E+ G L ++L+ R G+ + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 368 E-----------TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTE 416
E T Q + + HRD+ + N+L+ N K+ADFGL+R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----D 206
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
I++I + T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG GAFG V K + + VA+K +K T+ + +V+E
Sbjct: 35 DKLTLG----KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
++++ + H N++ LLG + G ++ E+ G L ++L+ R G+ + +
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 368 E-----------TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTE 416
E T Q + + HRD+ + N+L+ N K+ADFGL+R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----D 206
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
I++I + T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 36/219 (16%)
Query: 270 LGTGAFGTVYAGK---LQND-----LLVAIKRIKHRDTD-GIQQVVNEIKLISCV-SHPN 319
LG GAFG V + L D VA+K +K T+ + +++E++++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTV 365
++ LLG + G ++ E+ G L ++LQ R GL + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 366 AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ 425
A + A+ + +L S HRD+ + N+L+ + K+ADFGL+R +I HI +
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 426 GTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
T G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 270 LGTGAFGTVYAGKLQN----DLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSHPNLVRLL 324
LG G FG VY G N + VA+K K T D ++ ++E ++ + HP++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G IE ++ E P G L +L+R + + L + +++ +A+A+L S IN
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLES-IN--C 134
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRDI NIL+ K+ DFGLSR E + ++ + ++ P+ +
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
SDV+ F V + EI++ K F +V DR+ K L
Sbjct: 195 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL 238
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 270 LGTGAFGTVYAGKLQN----DLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSHPNLVRLL 324
LG G FG VY G N + VA+K K T D ++ ++E ++ + HP++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G IE ++ E P G L +L+R + + L + +++ +A+A+L S IN
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLES-IN--C 130
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRDI NIL+ K+ DFGLSR E + ++ + ++ P+ +
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
SDV+ F V + EI++ K F +V DR+ K L
Sbjct: 191 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL 234
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 270 LGTGAFGTVYAGKLQN----DLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSHPNLVRLL 324
LG G FG VY G N + VA+K K T D ++ ++E ++ + HP++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G IE ++ E P G L +L+R + + L + +++ +A+A+L S IN
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLES-IN--C 146
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
HRDI NIL+ K+ DFGLSR E + ++ + ++ P+ +
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
SDV+ F V + EI++ K F +V DR+ K L
Sbjct: 207 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL 250
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 269 RLGTGAFGTVY-AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
LG GAFG VY A + +L A K I + + ++ + EI +++ HPN+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 328 IERGEQILVYEFMPNGTL-CQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYH 386
++ EF G + L+ ER L+ V +T A+ +LH + I H
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 387 RDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY-----HQNFHL 441
RD+K+ NIL + K+ADFG+S I GTP ++ P+ ++
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXF-IGTPYWMAPEVVMCETSKDRPY 217
Query: 442 SDKSDVYSFGVVLVEI 457
K+DV+S G+ L+E+
Sbjct: 218 DYKADVWSLGITLIEM 233
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG GAFG V K + + VA+K +K T+ + +V+E
Sbjct: 35 DKLTLG----KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
++++ + H N++ LLG + G ++ E+ G L ++L+ R G+ + +
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 368 E-----------TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTE 416
E T Q + + HRD+ + N+L+ N K+ADFGL+R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----D 206
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
I++I + T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 17/218 (7%)
Query: 264 FSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
++ +++G GA GTVY A + VAI+++ + + ++NEI ++ +PN+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINP 382
L + E +V E++ G+L + D V E QA+ LHS
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA---AVCRECLQALEFLHSN--- 135
Query: 383 PIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLS 442
+ HRDIKS NILL + K+ DFG E S ST GTP ++ P+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKAYG 194
Query: 443 DKSDVYSFGVVLVEIITALKVVDFSRPP--NEVNLAAL 478
K D++S G++ +E+I PP NE L AL
Sbjct: 195 PKVDIWSLGIMAIEMIEG-------EPPYLNENPLRAL 225
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 264 FSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPN 319
F LG G+F VY A + L VAIK I + +Q+V NE+K+ + HP+
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
++ L + LV E NG + ++L + R S + + +LHS
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGL-SRLGMTEISHISTAPQGTPGYLDPQYHQN 438
I HRD+ SN+LL N K+ADFGL ++L M H + GTP Y+ P+
Sbjct: 132 ---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GTPNYISPEIATR 186
Query: 439 FHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALA 479
+SDV+S G + ++ D N +N LA
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 28/236 (11%)
Query: 247 SNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHR-DT 299
+ +P E + + F + LG GAFG V GK L VA+K +K
Sbjct: 33 TQLPYNEKWEFPRNNLQFG--KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 300 DGIQQVVNEIKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLS 358
D + +++E+K++S + H N+V LLG G +++ E+ G L L+R+R GL
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLE 150
Query: 359 WPIR--------------LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKV 404
+ L + + AQ +A L S HRD+ + N+LL +K+
Sbjct: 151 YSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKI 207
Query: 405 ADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
DFGL+R M + ++I P ++ P+ + + +SDV+S+G++L EI +
Sbjct: 208 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG GAFG V K + + VA+K +K T+ + +V+E
Sbjct: 35 DKLTLG----KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
++++ + H N++ LLG + G ++ E+ G L ++L+ R G+ + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 368 E-----------TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTE 416
E T Q + + HRD+ + N+L+ N K+ADFGL+R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----D 206
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
I++I T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 207 INNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 48/293 (16%)
Query: 268 QRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNL 320
+ LG G+FG VY G K + + VA+K + + + + +NE ++ + ++
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------LTVAMETAQA 372
VRLLG + ++V E M +G L +L+ R + + P R + +A E A
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG--- 429
+A+L++ HRD+ + N ++ ++F K+ DFG++R +I +G G
Sbjct: 140 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLP 192
Query: 430 --YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
++ P+ ++ + SD++SFGVVL E IT+L + NE L + + G
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFV----MDGGY 247
Query: 488 LDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELE 540
LD+ + +V +L C F+ MRP+ E+ L+
Sbjct: 248 LDQPDN----------------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 134/297 (45%), Gaps = 56/297 (18%)
Query: 268 QRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNL 320
+ LG G+FG VY G K + + VA+K + + + + +NE ++ + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------LTVAMETAQA 372
VRLLG + ++V E M +G L +L+ R + + P R + +A E A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG--- 429
+A+L++ HRD+ + N ++ ++F K+ DFG++R +I +G G
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLP 195
Query: 430 --YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
++ P+ ++ + SD++SFGVVL EI + A++ +G
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------------LAEQPYQGL 236
Query: 488 LDEIIDPLIIEHRGHSDAGTLAS----VHKVAELAFRCLAFHRDMRPSMTEVATELE 540
+E + ++ D G L +V +L C F+ MRP+ E+ L+
Sbjct: 237 SNEQVLKFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E+M NG+L L++ D I+L + A + +L +
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLS---DMG 138
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGLSR+ E ++ + + + P+
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 199 TSASDVWSYGIVLWEVMS 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E+M NG+L L++ D I+L + A + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGLSR+ E ++ + + + P+
Sbjct: 168 FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 228 TSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E+M NG+L L++ D I+L + A + +L +
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLS---DMG 155
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGLSR+ E ++ + + + P+
Sbjct: 156 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 215
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 216 TSASDVWSYGIVLWEVMS 233
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 22/230 (9%)
Query: 247 SNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHR-DT 299
+ +P E + + F + LG GAFG V GK L VA+K +K
Sbjct: 25 TQLPYNEKWEFPRNNLQFG--KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 82
Query: 300 DGIQQVVNEIKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQR------E 352
D + +++E+K++S + H N+V LLG G +++ E+ G L L+R +
Sbjct: 83 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 142
Query: 353 RGDGLSWPIR--LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLS 410
+ DG +R L + + AQ +A L S HRD+ + N+LL +K+ DFGL+
Sbjct: 143 KEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLA 199
Query: 411 RLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
R M + ++I P ++ P+ + + +SDV+S+G++L EI +
Sbjct: 200 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG GAFG V K + + VA+K +K T+ + +V+E
Sbjct: 35 DKLTLG----KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
++++ + H N++ LLG + G ++ E+ G L ++L+ R G+ + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 368 E-----------TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTE 416
E T Q + + HRD+ + N+L+ N ++ADFGL+R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR----D 206
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
I++I + T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 40/231 (17%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG GAFG V K + + VA+K +K T+ + +V+E
Sbjct: 35 DKLTLG----KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGL--SWPIR--- 362
++++ + H N++ LLG + G ++ E+ G L ++L+ R G+ S+ I
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 363 ---------LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLG 413
++ + A+ + +L S HRD+ + N+L+ N K+ADFGL+R
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR-- 205
Query: 414 MTEISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
+I++I + T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 206 --DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 36/219 (16%)
Query: 270 LGTGAFGTVYAGK---LQND-----LLVAIKRIKHRDTD-GIQQVVNEIKLISCV-SHPN 319
LG GAFG V + L D VA+K +K T+ + +++E++++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTV 365
++ LLG + G ++ E+ G L ++LQ GL + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 366 AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ 425
A + A+ + +L S HRD+ + N+L+ + K+ADFGL+R +I HI +
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 426 GTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
T G L ++ L D+ SDV+SFGV+L EI T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 135/297 (45%), Gaps = 56/297 (18%)
Query: 268 QRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNL 320
+ LG G+FG VY G K + + VA+K + + + + +NE ++ + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------LTVAMETAQA 372
VRLLG + ++V E M +G L +L+ R + + P R + +A E A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG--- 429
+A+L++ HRD+ + N ++ ++F K+ DFG++R +I + +G G
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETAYYRKGGKGLLP 195
Query: 430 --YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
++ P+ ++ + SD++SFGVVL EI + A++ +G
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------------LAEQPYQGL 236
Query: 488 LDEIIDPLIIEHRGHSDAGTLAS----VHKVAELAFRCLAFHRDMRPSMTEVATELE 540
+E + ++ D G L +V +L C F+ MRP+ E+ L+
Sbjct: 237 SNEQVLKFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 22/230 (9%)
Query: 247 SNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHR-DT 299
+ +P E + + F + LG GAFG V GK L VA+K +K
Sbjct: 33 TQLPYNEKWEFPRNNLQFG--KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 300 DGIQQVVNEIKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQR------E 352
D + +++E+K++S + H N+V LLG G +++ E+ G L L+R +
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 150
Query: 353 RGDGLSWPIR--LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLS 410
+ DG +R L + + AQ +A L S HRD+ + N+LL +K+ DFGL+
Sbjct: 151 KEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLA 207
Query: 411 RLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
R M + ++I P ++ P+ + + +SDV+S+G++L EI +
Sbjct: 208 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E+M NG+L L++ D I+L + A + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGLSR+ E ++ + + + P+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 228 TSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E+M NG+L L++ D I+L + A + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGLSR+ E ++ + + + P+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 228 TSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E+M NG+L L++ D I+L + A + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGLSR+ E ++ + + + P+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 228 TSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E+M NG+L L++ D I+L + A + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGLSR+ E ++ + + + P+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 228 TSASDVWSYGIVLWEVMS 245
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 48/293 (16%)
Query: 268 QRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNL 320
+ LG G+FG VY G K + + VA+K + + + + +NE ++ + ++
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------LTVAMETAQA 372
VRLLG + ++V E M +G L +L+ R + + P R + +A E A
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG--- 429
+A+L++ HRD+ + N ++ ++F K+ DFG++R +I +G G
Sbjct: 142 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 194
Query: 430 --YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
++ P+ ++ + SD++SFGVVL E IT+L + NE L + + G
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFV----MDGGY 249
Query: 488 LDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELE 540
LD+ + +V +L C F+ MRP+ E+ L+
Sbjct: 250 LDQPDN----------------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 112/216 (51%), Gaps = 21/216 (9%)
Query: 255 REIEKATIGFSEKQRLGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEI 309
+EI+ + I ++ +G G FG V +G+L+ ++ VAIK +K TD ++ ++E
Sbjct: 3 KEIDASCIKI--EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 60
Query: 310 KLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET 369
++ HPN++ L G + +++ E+M NG+L L++ G R TV ++
Sbjct: 61 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-------RFTV-IQL 112
Query: 370 AQAIAHLHSAI----NPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTA 423
+ + S + + HRD+ + NIL++ N KV+DFG+SR+ E ++ +
Sbjct: 113 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 424 PQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ + P+ + SDV+S+G+V+ E+++
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E+M NG+L L++ D I+L + A + +L
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---G 165
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGLSR+ E ++ + + + P+
Sbjct: 166 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 225
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 226 TSASDVWSYGIVLWEVMS 243
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 112/216 (51%), Gaps = 21/216 (9%)
Query: 255 REIEKATIGFSEKQRLGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEI 309
+EI+ + I ++ +G G FG V +G+L+ ++ VAIK +K TD ++ ++E
Sbjct: 9 KEIDASCIKI--EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 66
Query: 310 KLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET 369
++ HPN++ L G + +++ E+M NG+L L++ G R TV ++
Sbjct: 67 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-------RFTV-IQL 118
Query: 370 AQAIAHLHSAI----NPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTA 423
+ + S + + HRD+ + NIL++ N KV+DFG+SR+ E ++ +
Sbjct: 119 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 424 PQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ + P+ + SDV+S+G+V+ E+++
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 134/297 (45%), Gaps = 56/297 (18%)
Query: 268 QRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNL 320
+ LG G+FG VY G K + + VA+K + + + + +NE ++ + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------LTVAMETAQA 372
VRLLG + ++V E M +G L +L+ R + + P R + +A E A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG--- 429
+A+L++ HRD+ + N ++ ++F K+ DFG++R +I +G G
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 195
Query: 430 --YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
++ P+ ++ + SD++SFGVVL EI + A++ +G
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------------LAEQPYQGL 236
Query: 488 LDEIIDPLIIEHRGHSDAGTLAS----VHKVAELAFRCLAFHRDMRPSMTEVATELE 540
+E + ++ D G L +V +L C F+ MRP+ E+ L+
Sbjct: 237 SNEQVLKFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 264 FSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRIK---HRDTDGIQQVVNEIKLISCVSHPN 319
F ++++G G F VY A L + + VA+K+++ D + EI L+ ++HPN
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--LTVAMETAQAIAHLH 377
+++ IE E +V E G L + ++ + P R ++ A+ H+H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLDPQ 434
S + HRDIK +N+ + K+ D GL R S +TA GTP Y+ P+
Sbjct: 154 SR---RVMHRDIKPANVFITATGVVKLGDLGLGRF----FSSKTTAAHSLVGTPYYMSPE 206
Query: 435 -YHQNFHLSDKSDVYSFGVVLVEI 457
H+N + + KSD++S G +L E+
Sbjct: 207 RIHENGY-NFKSDIWSLGCLLYEM 229
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG G FG V K + + VA+K +K T+ + +V+E
Sbjct: 22 DKLTLG----KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
++++ + H N++ LLG + G ++ E+ G L ++L+ R G+ + +
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 368 E-----------TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTE 416
E T Q + + HRD+ + N+L+ N K+ADFGL+R +
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR----D 193
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
I++I + T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 194 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 115/239 (48%), Gaps = 27/239 (11%)
Query: 270 LGTGAFGTV--YAGKLQND---LLVAIKRIK------HRDTDGIQQVVNEIKLISCVSHP 318
LG G FG V Y ND +VA+K +K HR G +Q EI ++ + H
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS--GWKQ---EIDILRTLYHE 76
Query: 319 NLVRLLGCSIERGEQIL--VYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHL 376
++++ GC ++GE+ L V E++P G+L +L R + L A + + +A+L
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYL 133
Query: 377 HSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG--YLDPQ 434
HS HR++ + N+LLD + K+ DFGL++ + G + P+
Sbjct: 134 HSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 435 YHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIID 493
+ + SDV+SFGV L E++T S P + L +A +++ RL E+++
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQ-SPPTKFLELIGIAQGQMTVLRLTELLE 248
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 41/284 (14%)
Query: 270 LGTGAFGTVYAGKLQND-----LLVAIKRIKHRDTDGIQ---QVVNEIKLISCVSHPNLV 321
LG+GAFGTVY G + + VAIK + +T G + + ++E +++ + HP+LV
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILN--ETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
RLLG + Q LV + MP+G L +++ E D + + L ++ A+ + +L
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAKGMMYLEERR- 160
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQN 438
+ HRD+ + N+L+ K+ DFGL+RL + + P L+ +++
Sbjct: 161 --LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK 218
Query: 439 FHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIE 498
F + +SDV+S+GV + E++T F P + D + KG + + P I
Sbjct: 219 F--THQSDVWSYGVTIWELMT------FGGKPYDGIPTREIPDLLEKG--ERLPQPPI-- 266
Query: 499 HRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
V + +C D RP E+A E +
Sbjct: 267 -----------CTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 299
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG G FG V K + + VA+K +K T+ + +V+E
Sbjct: 27 DKLTLG----KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
++++ + H N++ LLG + G ++ E+ G L ++L+ R G+ + +
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 368 E-----------TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTE 416
E T Q + + HRD+ + N+L+ N K+ADFGL+R +
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----D 198
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
I++I + T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 199 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 138/315 (43%), Gaps = 56/315 (17%)
Query: 251 IYPYREIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ- 303
+Y E E A + + LG G+FG VY G K + + VAIK + + +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 304 QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI-- 361
+ +NE ++ + ++VRLLG + +++ E M G L +L+ R + + P+
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 362 ------RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
+ +A E A +A+L++ HRD+ + N ++ +F K+ DFG++R
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR---- 180
Query: 416 EISHISTAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPP 470
+I +G G ++ P+ ++ + SDV+SFGVVL EI T
Sbjct: 181 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 229
Query: 471 NEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFR----CLAFHR 526
A++ +G +E + ++E G L ++ F C ++
Sbjct: 230 --------LAEQPYQGLSNEQVLRFVME------GGLLDKPDNCPDMLFELMRMCWQYNP 275
Query: 527 DMRPSMTEVATELEH 541
MRPS E+ + ++
Sbjct: 276 KMRPSFLEIISSIKE 290
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 33/239 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI-----QQVVNEIKLISCVSHPNLVRLL 324
+GTG++G + ++D + + K D + Q +V+E+ L+ + HPN+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILV--WKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 325 GCSIERGEQIL--VYEFMPNGTLC----------QHLQRERGDGLSWPIRLTVAMETAQA 372
I+R L V E+ G L Q+L E + +R+ + A
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE------FVLRVMTQLTLALK 125
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLD 432
H S + HRD+K +N+ LD K+ DFGL+R+ + + + A GTP Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI-LNHDTSFAKAFVGTPYYMS 184
Query: 433 PQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEI 491
P+ ++KSD++S G +L E+ + PP A +I +G+ I
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALM-------PPFTAFSQKELAGKIREGKFRRI 236
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG G FG V K + + VA+K +K T+ + +V+E
Sbjct: 24 DKLTLG----KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
++++ + H N++ LLG + G ++ E+ G L ++L+ R G+ + +
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 368 E-----------TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTE 416
E T Q + + HRD+ + N+L+ N K+ADFGL+R +
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----D 195
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
I++I + T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 196 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 15/203 (7%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 5 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYHQ 437
+ HRD+K N+L++ K+ADFGL+R G+ ++ T T Y P+
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 176
Query: 438 NF-HLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG G FG V K + + VA+K +K T+ + +V+E
Sbjct: 81 DKLTLG----KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
++++ + H N++ LLG + G ++ E+ G L ++L+ R G+ + +
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 368 E-----------TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTE 416
E T Q + + HRD+ + N+L+ N K+ADFGL+R +
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----D 252
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
I++I + T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 253 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 112/216 (51%), Gaps = 21/216 (9%)
Query: 255 REIEKATIGFSEKQRLGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEI 309
+EI+ + I ++ +G G FG V +G+L+ ++ VAIK +K TD ++ ++E
Sbjct: 24 KEIDASCIKI--EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 81
Query: 310 KLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET 369
++ HPN++ L G + +++ E+M NG+L L++ G R TV ++
Sbjct: 82 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-------RFTV-IQL 133
Query: 370 AQAIAHLHSAI----NPPIYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTA 423
+ + S + + HRD+ + NIL++ N KV+DFG+SR+ E ++ +
Sbjct: 134 VGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 424 PQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ + P+ + SDV+S+G+V+ E+++
Sbjct: 194 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGIQQV-VNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 12 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K N+L++ K+ADFGL+R + T T Y P+
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 184
Query: 439 F-HLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG GAFG V K + + VA+K +K T+ + +V+E
Sbjct: 35 DKLTLG----KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
++++ + H N++ LLG + G ++ + G L ++L+ R G+ + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 368 E-----------TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTE 416
E T Q + + HRD+ + N+L+ N K+ADFGL+R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----D 206
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
I++I + T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E+M NG+L L++ D I+L + A + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGL+R+ E ++ + + + P+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 228 TSASDVWSYGIVLWEVMS 245
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 107/201 (53%), Gaps = 20/201 (9%)
Query: 270 LGTGAFGTVYAGKLQND-----LLVAIKRIKHRDTDGIQ---QVVNEIKLISCVSHPNLV 321
LG+GAFGTVY G + + VAIK + +T G + + ++E +++ + HP+LV
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILN--ETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
RLLG + Q LV + MP+G L +++ E D + + L ++ A+ + +L
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAKGMMYLEER-- 136
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP---GYLDPQYHQN 438
+ HRD+ + N+L+ K+ DFGL+RL + + P L+ +++
Sbjct: 137 -RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK 195
Query: 439 FHLSDKSDVYSFGVVLVEIIT 459
F + +SDV+S+GV + E++T
Sbjct: 196 F--THQSDVWSYGVTIWELMT 214
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 6 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K N+L++ K+ADFGL+R + T T Y P+
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 178
Query: 439 -FHLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 264 FSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
++ +++G GA GTVY A + VAI+++ + + ++NEI ++ +PN+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINP 382
L + E +V E++ G+L + D V E QA+ LHS
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA---AVCRECLQALEFLHSN--- 136
Query: 383 PIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLS 442
+ HR+IKS NILL + K+ DFG E S ST GTP ++ P+
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKAYG 195
Query: 443 DKSDVYSFGVVLVEII 458
K D++S G++ +E+I
Sbjct: 196 PKVDIWSLGIMAIEMI 211
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 12 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K N+L++ K+ADFGL+R + T T Y P+
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 184
Query: 439 -FHLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 5 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K N+L++ K+ADFGL+R + T T Y P+
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177
Query: 439 -FHLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 264 FSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
++ +++G GA GTVY A + VAI+++ + + ++NEI ++ +PN+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINP 382
L + E +V E++ G+L + D V E QA+ LHS
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA---AVCRECLQALEFLHSN--- 135
Query: 383 PIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLS 442
+ HRDIKS NILL + K+ DFG E S S GTP ++ P+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVTRKAYG 194
Query: 443 DKSDVYSFGVVLVEIITALKVVDFSRPP--NEVNLAAL 478
K D++S G++ +E+I PP NE L AL
Sbjct: 195 PKVDIWSLGIMAIEMIEG-------EPPYLNENPLRAL 225
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 4 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K N+L++ K+ADFGL+R + T T Y P+
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 176
Query: 439 -FHLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 43/229 (18%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
+ F E + +G+G FG V+ K + D I+R+K+ + ++ E+K ++ + H N+
Sbjct: 12 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNI 67
Query: 321 VRLLGC-------------SIERGEQ----------------ILVYEFMPNGTLCQHLQR 351
V GC S+E + + EF GTL Q +++
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 352 ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
RG+ L + L + + + + ++HS + HRD+K SNI L + K+ DFGL
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGL-- 182
Query: 412 LGMTEISHIS--TAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
+T + + T +GT Y+ P+ + + D+Y+ G++L E++
Sbjct: 183 --VTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 5 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K N+L++ K+ADFGL+R + T T Y P+
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177
Query: 439 -FHLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E M NG+L L++ D I+L + A + +L +
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLS---DMG 138
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGLSR+ E ++ + + + P+
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 199 TSASDVWSYGIVLWEVMS 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 4 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K N+L++ K+ADFGL+R + T T Y P+
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 176
Query: 439 -FHLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 140/320 (43%), Gaps = 56/320 (17%)
Query: 246 ISNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDT 299
+S +Y E E A + + LG G+FG VY G K + + VAIK + +
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 61
Query: 300 DGIQ-QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLS 358
+ + +NE ++ + ++VRLLG + +++ E M G L +L+ R + +
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 359 WPI--------RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLS 410
P+ + +A E A +A+L++ HRD+ + N ++ +F K+ DFG++
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 411 RLGMTEISHISTAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVD 465
R +I +G G ++ P+ ++ + SDV+SFGVVL EI T
Sbjct: 179 R----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------ 228
Query: 466 FSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFR----C 521
A++ +G +E + ++E G L ++ F C
Sbjct: 229 -------------LAEQPYQGLSNEQVLRFVME------GGLLDKPDNCPDMLFELMRMC 269
Query: 522 LAFHRDMRPSMTEVATELEH 541
++ MRPS E+ + ++
Sbjct: 270 WQYNPKMRPSFLEIISSIKE 289
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 264 FSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
++ +++G GA GTVY A + VAI+++ + + ++NEI ++ +PN+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINP 382
L + E +V E++ G+L + D V E QA+ LHS
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA---AVCRECLQALEFLHSN--- 135
Query: 383 PIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLS 442
+ HRDIKS NILL + K+ DFG E S S GTP ++ P+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM-VGTPYWMAPEVVTRKAYG 194
Query: 443 DKSDVYSFGVVLVEIITALKVVDFSRPP--NEVNLAAL 478
K D++S G++ +E+I PP NE L AL
Sbjct: 195 PKVDIWSLGIMAIEMIEG-------EPPYLNENPLRAL 225
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 11/148 (7%)
Query: 270 LGTGAFGTVYAGKLQN-DLLVAIKRIK--HRD--TDGIQQV-VNEIKLISCVSHPNLVRL 323
LG G F TVY + +N + +VAIK+IK HR DGI + + EIKL+ +SHPN++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
L + LV++FM T + + ++ L+ + T Q + +LH
Sbjct: 78 LDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW--- 132
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSR 411
I HRD+K +N+LLD N K+ADFGL++
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 264 FSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
++ +++G GA GTVY A + VAI+++ + + ++NEI ++ +PN+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINP 382
L + E +V E++ G+L + D V E QA+ LHS
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA---AVCRECLQALEFLHSN--- 136
Query: 383 PIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLS 442
+ HRDIKS NILL + K+ DFG E S S GTP ++ P+
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVTRKAYG 195
Query: 443 DKSDVYSFGVVLVEIITALKVVDFSRPP--NEVNLAAL 478
K D++S G++ +E+I PP NE L AL
Sbjct: 196 PKVDIWSLGIMAIEMIEG-------EPPYLNENPLRAL 226
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 9 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K N+L++ K+ADFGL+R + T T Y P+
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 181
Query: 439 -FHLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 143/320 (44%), Gaps = 56/320 (17%)
Query: 245 GISNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRD 298
G+ +Y E E + + + LG G+FG VY G K + + VA+K +
Sbjct: 1 GVFPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA 60
Query: 299 TDGIQ-QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGL 357
+ + + +NE ++ + ++VRLLG + ++V E M +G L +L+ R +
Sbjct: 61 SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE 120
Query: 358 SWPIR--------LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGL 409
+ P R + +A E A +A+L++ HR++ + N ++ ++F K+ DFG+
Sbjct: 121 NNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGM 177
Query: 410 SRLGMTEISHISTAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVV 464
+R +I +G G ++ P+ ++ + SD++SFGVVL EI +
Sbjct: 178 TR----DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS----- 228
Query: 465 DFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAGTLAS----VHKVAELAFR 520
A++ +G +E + ++ D G L +V +L
Sbjct: 229 --------------LAEQPYQGLSNEQVLKFVM------DGGYLDQPDNCPERVTDLMRM 268
Query: 521 CLAFHRDMRPSMTEVATELE 540
C F+ +MRP+ E+ L+
Sbjct: 269 CWQFNPNMRPTFLEIVNLLK 288
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 140/320 (43%), Gaps = 56/320 (17%)
Query: 246 ISNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDT 299
+S +Y E E A + + LG G+FG VY G K + + VAIK + +
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 61
Query: 300 DGIQ-QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLS 358
+ + +NE ++ + ++VRLLG + +++ E M G L +L+ R + +
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 359 WPI--------RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLS 410
P+ + +A E A +A+L++ HRD+ + N ++ +F K+ DFG++
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 411 RLGMTEISHISTAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVD 465
R +I +G G ++ P+ ++ + SDV+SFGVVL EI T
Sbjct: 179 R----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------ 228
Query: 466 FSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFR----C 521
A++ +G +E + ++E G L ++ F C
Sbjct: 229 -------------LAEQPYQGLSNEQVLRFVME------GGLLDKPDNCPDMLFELMRMC 269
Query: 522 LAFHRDMRPSMTEVATELEH 541
++ MRPS E+ + ++
Sbjct: 270 WQYNPKMRPSFLEIISSIKE 289
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 5 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 179 KYY-----STAVDIWSLGCIFAEMVT 199
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 135/297 (45%), Gaps = 56/297 (18%)
Query: 268 QRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNL 320
+ LG G+FG VY G K + + VA+K + + + + +NE ++ + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------LTVAMETAQA 372
VRLLG + ++V E M +G L +L+ R + + P R + +A E A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG--- 429
+A+L++ HR++ + N ++ ++F K+ DFG++R +I +G G
Sbjct: 143 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 195
Query: 430 --YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
++ P+ ++ + SD++SFGVVL EI + A++ +G
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------------LAEQPYQGL 236
Query: 488 LDEIIDPLIIEHRGHSDAGTLAS----VHKVAELAFRCLAFHRDMRPSMTEVATELE 540
+E + ++ D G L +V +L C F+ +MRP+ E+ L+
Sbjct: 237 SNEQVLKFVM------DGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E+M NG+L L++ D I+L + A + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGL R+ E ++ + + + P+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 228 TSASDVWSYGIVLWEVMS 245
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 6 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 123 H---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 180 KYY-----STAVDIWSLGCIFAEMVT 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 4 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 178 KYY-----STAVDIWSLGCIFAEMVT 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 5 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 179 KYY-----STAVDIWSLGCIFAEMVT 199
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 6 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 123 H---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 180 KYY-----STAVDIWSLGCIFAEMVT 200
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 136 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 27/239 (11%)
Query: 270 LGTGAFGTV--YAGKLQND---LLVAIKRIK------HRDTDGIQQVVNEIKLISCVSHP 318
LG G FG V Y ND +VA+K +K HR G +Q EI ++ + H
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS--GWKQ---EIDILRTLYHE 76
Query: 319 NLVRLLGCSIERGEQIL--VYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHL 376
++++ GC ++GE+ L V E++P G+L +L R + L A + + +A+L
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYL 133
Query: 377 HSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG--YLDPQ 434
H+ HR++ + N+LLD + K+ DFGL++ + G + P+
Sbjct: 134 HAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 435 YHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIID 493
+ + SDV+SFGV L E++T S P + L +A +++ RL E+++
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQ-SPPTKFLELIGIAQGQMTVLRLTELLE 248
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 7 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 124 H---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 181 KYY-----STAVDIWSLGCIFAEMVT 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 4 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 178 KYY-----STAVDIWSLGCIFAEMVT 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 6 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 180 KYY-----STAVDIWSLGCIFAEMVT 200
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 33/239 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI-----QQVVNEIKLISCVSHPNLVRLL 324
+GTG++G + ++D + + K D + Q +V+E+ L+ + HPN+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILV--WKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 325 GCSIERGEQIL--VYEFMPNGTLC----------QHLQRERGDGLSWPIRLTVAMETAQA 372
I+R L V E+ G L Q+L E + +R+ + A
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE------FVLRVMTQLTLALK 125
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLD 432
H S + HRD+K +N+ LD K+ DFGL+R+ + S T GTP Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMS 184
Query: 433 PQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEI 491
P+ ++KSD++S G +L E+ + PP A +I +G+ I
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALM-------PPFTAFSQKELAGKIREGKFRRI 236
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 6 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 180 KYY-----STAVDIWSLGCIFAEMVT 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 8 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 125 H---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 182 KYY-----STAVDIWSLGCIFAEMVT 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 5 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 179 KYY-----STAVDIWSLGCIFAEMVT 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 7 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 124 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 181 KYY-----STAVDIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 8 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 182 KYY-----STAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 7 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 124 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 181 KYY-----STAVDIWSLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 8 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 182 KYY-----STAVDIWSLGCIFAEMVT 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 9 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 126 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 182
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 183 KYY-----STAVDIWSLGCIFAEMVT 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 5 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 179 KYY-----STAVDIWSLGCIFAEMVT 199
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 139 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAG--------KLQNDLLVAIKRIKHRDTD-GIQQVVNE 308
+K T+G + LG GAFG V K + + VA+K +K T+ + +V+E
Sbjct: 35 DKLTLG----KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 309 IKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
++++ + H N++ LLG + G ++ + G L ++L+ R G+ + +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 368 E-----------TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTE 416
E T Q + + HRD+ + N+L+ N K+ADFGL+R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----D 206
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIIT 459
I++I + T G L ++ L D+ SDV+SFGV++ EI T
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQ-NDLLVAIKRIKHRDTD-GIQQVVNEIKLISCVSHPNLV 321
F Q LG G FG V+ K + +D AIKRI+ + + ++V+ E+K ++ + HP +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLS-W------------PIRLTVAME 368
R +E+ + P L +Q R + L W + L + ++
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGL-SRLGMTEISHISTAPQ-- 425
A+A+ LHS + HRD+K SNI + KV DFGL + + E P
Sbjct: 127 IAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 426 --------GTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
GT Y+ P+ S K D++S G++L E++
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 37/279 (13%)
Query: 270 LGTGAFGTVYAGKLQND-----LLVAIKRIKHRD-TDGIQQVVNEIKLISCVSHPNLVRL 323
LG+G FGTV+ G + + V IK I+ + Q V + + I + H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
LG Q LV +++P G+L H+++ RG L + L ++ A+ + +L
Sbjct: 99 LGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYYLEEH---G 153
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHL-- 441
+ HR++ + N+LL + +VADFG++ L + + + TP + ++ H
Sbjct: 154 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP--IKWMALESIHFGK 211
Query: 442 -SDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHR 500
+ +SDV+S+GV + E++T A+ + RL E+ D L +
Sbjct: 212 YTHQSDVWSYGVTVWELMT------------------FGAEPYAGLRLAEVPDLL---EK 250
Query: 501 GHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATEL 539
G A V + +C ++RP+ E+A E
Sbjct: 251 GERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 289
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 136 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E M NG+L L++ D I+L + A + +L
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGLSR+ E ++ + + + P+
Sbjct: 168 AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 228 TSASDVWSYGIVLWEVMS 245
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 138 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 270 LGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTDGIQQ-VVNEIKLISCVSHPNLVRLL 324
+G G FG V +G+L+ ++ VAIK +K T+ ++ + E ++ HPN++RL
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME-TAQAIAHLHSAINPP 383
G + ++V E M NG+L L++ D I+L + A + +L
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---G 167
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQYHQNFHL 441
HRD+ + NIL++ N KV+DFGLSR+ E ++ + + + P+
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 442 SDKSDVYSFGVVLVEIIT 459
+ SDV+S+G+VL E+++
Sbjct: 228 TSASDVWSYGIVLWEVMS 245
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAEGMNYLE 131
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 132 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 37/279 (13%)
Query: 270 LGTGAFGTVYAGKLQND-----LLVAIKRIKHRD-TDGIQQVVNEIKLISCVSHPNLVRL 323
LG+G FGTV+ G + + V IK I+ + Q V + + I + H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
LG Q LV +++P G+L H+++ RG L + L ++ A+ + +L
Sbjct: 81 LGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYYLEEH---G 135
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHL-- 441
+ HR++ + N+LL + +VADFG++ L + + + TP + ++ H
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP--IKWMALESIHFGK 193
Query: 442 -SDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIIDPLIIEHR 500
+ +SDV+S+GV + E++T A+ + RL E+ D L +
Sbjct: 194 YTHQSDVWSYGVTVWELMT------------------FGAEPYAGLRLAEVPDLL---EK 232
Query: 501 GHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATEL 539
G A V + +C ++RP+ E+A E
Sbjct: 233 GERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 271
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 13/195 (6%)
Query: 270 LGTGAFGTVYAGKL-QNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCV-SHPNLVRLL 324
LG G+FG V ++ + L A+K +K D ++ + E +++S +HP L +L
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF 90
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
C V EF+ G L H+Q+ R A E A+ LH + I
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARFYAAEIISALMFLH---DKGI 145
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ-GTPGYLDPQYHQNFHLSD 443
+RD+K N+LLD+ K+ADFG+ + G+ + ++TA GTP Y+ P+ Q
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NGVTTATFCGTPDYIAPEILQEMLYGP 203
Query: 444 KSDVYSFGVVLVEII 458
D ++ GV+L E++
Sbjct: 204 AVDWWAMGVLLYEML 218
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 138/315 (43%), Gaps = 56/315 (17%)
Query: 251 IYPYREIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ- 303
+Y E E A + + LG G+FG VY G K + + VAIK + + +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 304 QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI-- 361
+ +NE ++ + ++VRLLG + +++ E M G L +L+ R + + P+
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 362 ------RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
+ +A E A +A+L++ HRD+ + N ++ +F K+ DFG++R
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR---- 180
Query: 416 EISHISTAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPP 470
+I +G G ++ P+ ++ + SDV+SFGVVL EI T
Sbjct: 181 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 229
Query: 471 NEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFR----CLAFHR 526
A++ +G +E + ++E G L ++ F C ++
Sbjct: 230 --------LAEQPYQGLSNEQVLRFVME------GGLLDKPDNCPDMLFELMRMCWQYNP 275
Query: 527 DMRPSMTEVATELEH 541
MRPS E+ + ++
Sbjct: 276 KMRPSFLEIISSIKE 290
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 138 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 138 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 138 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ-QVVNE 308
E E A + + LG G+FG VY G K + + VAIK + + + + +NE
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI------- 361
++ + ++VRLLG + +++ E M G L +L+ R + + P+
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 362 -RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
+ +A E A +A+L++ HRD+ + N ++ +F K+ DFG++R +I
Sbjct: 124 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXET 176
Query: 421 STAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+G G ++ P+ ++ + SDV+SFGVVL EI T
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 142 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 129 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 138/315 (43%), Gaps = 56/315 (17%)
Query: 251 IYPYREIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ- 303
+Y E E A + + LG G+FG VY G K + + VAIK + + +
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 304 QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI-- 361
+ +NE ++ + ++VRLLG + +++ E M G L +L+ R + + P+
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 362 ------RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
+ +A E A +A+L++ HRD+ + N ++ +F K+ DFG++R
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR---- 208
Query: 416 EISHISTAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPP 470
+I +G G ++ P+ ++ + SDV+SFGVVL EI T
Sbjct: 209 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 257
Query: 471 NEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFR----CLAFHR 526
A++ +G +E + ++E G L ++ F C ++
Sbjct: 258 --------LAEQPYQGLSNEQVLRFVME------GGLLDKPDNCPDMLFELMRMCWQYNP 303
Query: 527 DMRPSMTEVATELEH 541
MRPS E+ + ++
Sbjct: 304 KMRPSFLEIISSIKE 318
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 140
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 141 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMT 220
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 138/315 (43%), Gaps = 56/315 (17%)
Query: 251 IYPYREIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ- 303
+Y E E A + + LG G+FG VY G K + + VAIK + + +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 304 QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI-- 361
+ +NE ++ + ++VRLLG + +++ E M G L +L+ R + + P+
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 362 ------RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
+ +A E A +A+L++ HRD+ + N ++ +F K+ DFG++R
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR---- 186
Query: 416 EISHISTAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPP 470
+I +G G ++ P+ ++ + SDV+SFGVVL EI T
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 235
Query: 471 NEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFR----CLAFHR 526
A++ +G +E + ++E G L ++ F C ++
Sbjct: 236 --------LAEQPYQGLSNEQVLRFVME------GGLLDKPDNCPDMLFELMRMCWQYNP 281
Query: 527 DMRPSMTEVATELEH 541
MRPS E+ + ++
Sbjct: 282 KMRPSFLEIISSIKE 296
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 5 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + G+ P+ + + Q +A HS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 122 H---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 179 KYY-----STAVDIWSLGCIFAEMVT 199
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 144
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 145 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLV 321
F + LG G G V+ + LV +++ H + Q++ E++++ + P +V
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G GE + E M G+L Q L++ + I V++ + + +L
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 128
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHL 441
I HRD+K SNIL++ + K+ DFG+S + E+++ GT Y+ P+ Q H
Sbjct: 129 --IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV---GTRSYMSPERLQGTHY 183
Query: 442 SDKSDVYSFGVVLVEIITALKVVDFSRPP 470
S +SD++S G+ LVE + V + RPP
Sbjct: 184 SVQSDIWSMGLSLVE----MAVGRYPRPP 208
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 7 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + G+ P+ + + Q +A HS
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 124 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 181 KYY-----STAVDIWSLGCIFAEMVT 201
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 56/310 (18%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ-QVVNE 308
E E A + + LG G+FG VY G K + + VAIK + + + + +NE
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI------- 361
++ + ++VRLLG + +++ E M G L +L+ R + + P+
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 362 -RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
+ +A E A +A+L++ HRD+ + N ++ +F K+ DFG++R +I
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 178
Query: 421 STAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNL 475
+G G ++ P+ ++ + SDV+SFGVVL EI T
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------- 222
Query: 476 AALAADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFR----CLAFHRDMRPS 531
A++ +G +E + ++E G L ++ F C ++ MRPS
Sbjct: 223 ---LAEQPYQGLSNEQVLRFVME------GGLLDKPDNCPDMLFELMRMCWQYNPKMRPS 273
Query: 532 MTEVATELEH 541
E+ + ++
Sbjct: 274 FLEIISSIKE 283
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 8 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + G+ P+ + + Q +A HS
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 182 KYY-----STAVDIWSLGCIFAEMVT 202
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
+ F E + +G+G FG V+ K + D IKR+K+ + ++ E+K ++ + H N+
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66
Query: 321 VRLLGC-------------SIERGEQILVY---EFMPNGTLCQHLQRERGDGLSWPIRLT 364
V GC + R + ++ EF GTL Q +++ RG+ L + L
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 365 VAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--T 422
+ + + + ++HS + +RD+K SNI L + K+ DFGL +T + +
Sbjct: 127 LFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGL----VTSLKNDGKRX 179
Query: 423 APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
+GT Y+ P+ + + D+Y+ G++L E++
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 5 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q ++ HS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K N+L++ K+ADFGL+R + T T Y P+
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177
Query: 439 -FHLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 159
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 160 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 103/195 (52%), Gaps = 8/195 (4%)
Query: 264 FSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
F ++LG G++G+VY A + +VAIK++ ++D +Q+++ EI ++ P++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP-VESD-LQEIIKEISIMQQCDSPHVVK 88
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINP 382
G + + +V E+ G++ + R R L+ T+ T + + +LH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEYLHFMRK- 146
Query: 383 PIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLS 442
HRDIK+ NILL+ +K+ADFG++ +T+ GTP ++ P+ Q +
Sbjct: 147 --IHRDIKAGNILLNTEGHAKLADFGVAG-QLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 443 DKSDVYSFGVVLVEI 457
+D++S G+ +E+
Sbjct: 204 CVADIWSLGITAIEM 218
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 8 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + G+ P+ + + Q +A HS
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 182 KYY-----STAVDIWSLGCIFAEMVT 202
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 56/281 (19%)
Query: 273 GAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSIERG- 331
G FG V+ +L ND VA+K +D Q EI + H NL++ + +RG
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQSE-REIFSTPGMKHENLLQFIAAE-KRGS 82
Query: 332 ----EQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI------- 380
E L+ F G+L +L +G+ ++W VA ++ +++LH +
Sbjct: 83 NLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 381 -NPPIYHRDIKSSNILLDYNFKSKVADFGLS-RLGMTEISHISTAPQGTPGYLDPQYHQ- 437
P I HRD KS N+LL + + +ADFGL+ R + + GT Y+ P+ +
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEG 199
Query: 438 --NFHLSD--KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIID 493
NF + D+Y+ G+VL E+++ K D G +DE +
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWELVSRCKAAD--------------------GPVDEYML 239
Query: 494 PLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTE 534
P + G S+ ++ E + H+ MRP++ +
Sbjct: 240 PF------EEEIGQHPSLEELQE-----VVVHKKMRPTIKD 269
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 56/310 (18%)
Query: 256 EIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ-QVVNE 308
E E A + + LG G+FG VY G K + + VAIK + + + + +NE
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 309 IKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI------- 361
++ + ++VRLLG + +++ E M G L +L+ R + + P+
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 129
Query: 362 -RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
+ +A E A +A+L++ HRD+ + N ++ +F K+ DFG++R +I
Sbjct: 130 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 182
Query: 421 STAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNL 475
+G G ++ P+ ++ + SDV+SFGVVL EI T
Sbjct: 183 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------- 226
Query: 476 AALAADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFR----CLAFHRDMRPS 531
A++ +G +E + ++E G L ++ F C ++ MRPS
Sbjct: 227 ---LAEQPYQGLSNEQVLRFVME------GGLLDKPDNCPDMLFELMRMCWQYNPKMRPS 277
Query: 532 MTEVATELEH 541
E+ + ++
Sbjct: 278 FLEIISSIKE 287
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 33/239 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI-----QQVVNEIKLISCVSHPNLVRLL 324
+GTG++G + ++D + + K D + Q +V+E+ L+ + HPN+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILV--WKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 325 GCSIERGEQIL--VYEFMPNGTLC----------QHLQRERGDGLSWPIRLTVAMETAQA 372
I+R L V E+ G L Q+L E + +R+ + A
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE------FVLRVMTQLTLALK 125
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLD 432
H S + HRD+K +N+ LD K+ DFGL+R+ + + GTP Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI-LNHDEDFAKEFVGTPYYMS 184
Query: 433 PQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEI 491
P+ ++KSD++S G +L E+ + PP A +I +G+ I
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALM-------PPFTAFSQKELAGKIREGKFRRI 236
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 269 RLGTGAFGTVY-AGKLQNDLLVAIKRI---KHRDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+LG G TVY A ++ VAIK I + +++ E+ S +SH N+V ++
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
E LV E++ TL +++ E LS + + I H H I
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHDM---RI 132
Query: 385 YHRDIKSSNILLDYNFKSKVADFG----LSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
HRDIK NIL+D N K+ DFG LS +T+ +H+ GT Y P+ +
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHV----LGTVQYFSPEQAKGEA 188
Query: 441 LSDKSDVYSFGVVLVEIITA 460
+ +D+YS G+VL E++
Sbjct: 189 TDECTDIYSIGIVLYEMLVG 208
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 137/315 (43%), Gaps = 56/315 (17%)
Query: 251 IYPYREIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ- 303
+Y E E A + + LG G+FG VY G K + + VAIK + + +
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 304 QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI-- 361
+ +NE ++ + ++VRLLG + +++ E M G L +L+ R + P+
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 362 ------RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
+ +A E A +A+L++ HRD+ + N ++ +F K+ DFG++R
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR---- 176
Query: 416 EISHISTAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPP 470
+I +G G ++ P+ ++ + SDV+SFGVVL EI T
Sbjct: 177 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 225
Query: 471 NEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFR----CLAFHR 526
A++ +G +E + ++E G L ++ F C ++
Sbjct: 226 --------LAEQPYQGLSNEQVLRFVME------GGLLDKPDNCPDMLFELMRMCWQYNP 271
Query: 527 DMRPSMTEVATELEH 541
MRPS E+ + ++
Sbjct: 272 KMRPSFLEIISSIKE 286
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 31/265 (11%)
Query: 269 RLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
++G G+ G V +++ LVA+K++ R + + NE+ ++ H N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ E +V EF+ G L + R + V + QA++ LH+ + HR
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI---AAVCLAVLQALSVLHAQG---VIHR 271
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
DIKS +ILL ++ + K++DFG E+ GTP ++ P+ + D+
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDI 330
Query: 448 YSFGVVLVEII------------TALKVVDFSRPPNEVNLAALAADRISKGRLDEII--D 493
+S G++++E++ A+K++ + PP NL ++ KG LD ++ D
Sbjct: 331 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS--LKGFLDRLLVRD 388
Query: 494 PL-------IIEHRGHSDAGTLASV 511
P +++H + AG AS+
Sbjct: 389 PAQRATAAELLKHPFLAKAGPPASI 413
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 137/315 (43%), Gaps = 56/315 (17%)
Query: 251 IYPYREIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ- 303
+Y E E A + + LG G+FG VY G K + + VAIK + + +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 304 QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI-- 361
+ +NE ++ + ++VRLLG + +++ E M G L +L+ R + P+
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 362 ------RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
+ +A E A +A+L++ HRD+ + N ++ +F K+ DFG++R
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR---- 186
Query: 416 EISHISTAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPP 470
+I +G G ++ P+ ++ + SDV+SFGVVL EI T
Sbjct: 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 235
Query: 471 NEVNLAALAADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFR----CLAFHR 526
A++ +G +E + ++E G L ++ F C ++
Sbjct: 236 --------LAEQPYQGLSNEQVLRFVME------GGLLDKPDNCPDMLFELMRMCWQYNP 281
Query: 527 DMRPSMTEVATELEH 541
MRPS E+ + ++
Sbjct: 282 KMRPSFLEIISSIKE 296
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 13/202 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+ +I+ +T+G+ + EI L+ ++HP
Sbjct: 5 FQKVEKIGEGTYGVVY--KARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K N+L++ K+ADFGL+R + T T Y P+
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 177
Query: 439 -FHLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 13/202 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+ +I+ +T+G+ + EI L+ ++HP
Sbjct: 4 FQKVEKIGEGTYGVVY--KARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+EF+ + L + + G+ P+ + + Q +A HS
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K N+L++ K+ADFGL+R + T T Y P+
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 176
Query: 439 -FHLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 30/231 (12%)
Query: 247 SNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVV 306
S +P+ R I + + ++ +G G FG V+ GK + + VA+K R+ +
Sbjct: 17 SGLPLLVQRTIARTIV---LQESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREA 72
Query: 307 NEIKLISCVSHPNLVRLLGCSIERG----EQILVYEFMPNGTLCQHLQRERG--DGLSWP 360
EI + H N++ + + + LV ++ +G+L +L R +G+
Sbjct: 73 -EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 128
Query: 361 IRLTVAMETAQAIAHLHSAI-----NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
+ +A+ TA +AHLH I P I HRD+KS NIL+ N +AD GL+ +
Sbjct: 129 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 186
Query: 416 EISHISTAPQ---GTPGYLDPQY------HQNFHLSDKSDVYSFGVVLVEI 457
I AP GT Y+ P+ ++F ++D+Y+ G+V EI
Sbjct: 187 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 31/265 (11%)
Query: 269 RLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
++G G+ G V +++ LVA+K++ R + + NE+ ++ H N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ E +V EF+ G L + R + V + QA++ LH+ + HR
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQ---GVIHR 140
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
DIKS +ILL ++ + K++DFG E+ GTP ++ P+ + D+
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDI 199
Query: 448 YSFGVVLVEII------------TALKVVDFSRPPNEVNLAALAADRISKGRLDEII--D 493
+S G++++E++ A+K++ + PP NL ++ KG LD ++ D
Sbjct: 200 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS--LKGFLDRLLVRD 257
Query: 494 PL-------IIEHRGHSDAGTLASV 511
P +++H + AG AS+
Sbjct: 258 PAQRATAAELLKHPFLAKAGPPASI 282
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 31/265 (11%)
Query: 269 RLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
++G G+ G V +++ LVA+K++ R + + NE+ ++ H N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ E +V EF+ G L + R + V + QA++ LH+ + HR
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI---AAVCLAVLQALSVLHAQ---GVIHR 149
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
DIKS +ILL ++ + K++DFG E+ GTP ++ P+ + D+
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDI 208
Query: 448 YSFGVVLVEII------------TALKVVDFSRPPNEVNLAALAADRISKGRLDEII--D 493
+S G++++E++ A+K++ + PP NL ++ KG LD ++ D
Sbjct: 209 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS--LKGFLDRLLVRD 266
Query: 494 PL-------IIEHRGHSDAGTLASV 511
P +++H + AG AS+
Sbjct: 267 PAQRATAAELLKHPFLAKAGPPASI 291
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 31/265 (11%)
Query: 269 RLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
++G G+ G V +++ LVA+K++ R + + NE+ ++ H N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ E +V EF+ G L + R + V + QA++ LH+ + HR
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI---AAVCLAVLQALSVLHAQ---GVIHR 151
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
DIKS +ILL ++ + K++DFG E+ GTP ++ P+ + D+
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDI 210
Query: 448 YSFGVVLVEII------------TALKVVDFSRPPNEVNLAALAADRISKGRLDEII--D 493
+S G++++E++ A+K++ + PP NL ++ KG LD ++ D
Sbjct: 211 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS--LKGFLDRLLVRD 268
Query: 494 PL-------IIEHRGHSDAGTLASV 511
P +++H + AG AS+
Sbjct: 269 PAQRATAAELLKHPFLAKAGPPASI 293
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
+++G G +G V+ GK + + + + ++ EI + H N++ +
Sbjct: 43 KQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAAD 100
Query: 328 IE----RGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI--- 380
I+ + L+ ++ NG+L +L+ D S L +A + + HLH+ I
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKS---MLKLAYSSVSGLCHLHTEIFST 157
Query: 381 --NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLDPQY 435
P I HRD+KS NIL+ N +AD GL+ +++ + + P GT Y+ P+
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEV 217
Query: 436 ------HQNFHLSDKSDVYSFGVVLVEI 457
+F +D+YSFG++L E+
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 255 REIEKATIGFSEKQRLGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTD-GIQQVVNEI 309
+EI+ + + E +G G FG V G+L+ + VAIK +K T+ ++ ++E
Sbjct: 11 KEIDVSYVKIEEV--IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 68
Query: 310 KLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME- 368
++ HPN++RL G +++ EFM NG L L+ DG I+L +
Sbjct: 69 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL--NDGQFTVIQLVGMLRG 126
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
A + +L HRD+ + NIL++ N KV+DFGLSR + E S T
Sbjct: 127 IASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRF-LEENSSDPTETSSLG 182
Query: 429 G-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
G + P+ + SD +S+G+V+ E+++
Sbjct: 183 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 30/231 (12%)
Query: 247 SNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVV 306
S +P+ R I + + ++ +G G FG V+ GK + + VA+K R+ +
Sbjct: 30 SGLPLLVQRTIARTIV---LQESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREA 85
Query: 307 NEIKLISCVSHPNLVRLLGCSIERG----EQILVYEFMPNGTLCQHLQRERG--DGLSWP 360
EI + H N++ + + + LV ++ +G+L +L R +G+
Sbjct: 86 -EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--- 141
Query: 361 IRLTVAMETAQAIAHLHSAI-----NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
+ +A+ TA +AHLH I P I HRD+KS NIL+ N +AD GL+ +
Sbjct: 142 --IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 199
Query: 416 EISHISTAPQ---GTPGYLDPQY------HQNFHLSDKSDVYSFGVVLVEI 457
I AP GT Y+ P+ ++F ++D+Y+ G+V EI
Sbjct: 200 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 31/265 (11%)
Query: 269 RLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
++G G+ G V +++ LVA+K++ R + + NE+ ++ H N+V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ E +V EF+ G L + R + V + QA++ LH+ + HR
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI---AAVCLAVLQALSVLHAQ---GVIHR 194
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
DIKS +ILL ++ + K++DFG E+ GTP ++ P+ + D+
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDI 253
Query: 448 YSFGVVLVEII------------TALKVVDFSRPPNEVNLAALAADRISKGRLDEII--D 493
+S G++++E++ A+K++ + PP NL ++ KG LD ++ D
Sbjct: 254 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS--LKGFLDRLLVRD 311
Query: 494 PL-------IIEHRGHSDAGTLASV 511
P +++H + AG AS+
Sbjct: 312 PAQRATAAELLKHPFLAKAGPPASI 336
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 264 FSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRI-KHRDTDGIQQVVNEIKLISCVSHPNLV 321
F K++LG+GAFG V+ + + L IK I K R ++Q+ EI+++ + HPN++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHL--QRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
++ + +V E G L + + + RG LS + + A+A+ HS
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 380 INPPIYHRDIKSSNILL-DYNFKS--KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYH 436
+ H+D+K NIL D + S K+ DFGL+ L ++ H ST GT Y+ P+
Sbjct: 144 ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-EH-STNAAGTALYMAPEVF 198
Query: 437 QNFHLSDKSDVYSFGVVLVEIITA 460
+ ++ K D++S GVV+ ++T
Sbjct: 199 KR-DVTFKCDIWSAGVVMYFLLTG 221
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 264 FSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRIKH---RDTDGIQQVVNEIKLISCVSHPN 319
FS+ + +G G+FG VY A ++N +VAIK++ + + + Q ++ E++ + + HPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
++ GC + LV E+ G+ L+ + I V Q +A+LHS
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHSH 173
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY---H 436
+ HRD+K+ NILL K+ DFG + + + GTP ++ P+
Sbjct: 174 ---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAM 225
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAA 480
K DV+S G+ +E+ R P N+ A++A
Sbjct: 226 DEGQYDGKVDVWSLGITCIELA--------ERKPPLFNMNAMSA 261
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 31/265 (11%)
Query: 269 RLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
++G G+ G V +++ LVA+K++ R + + NE+ ++ H N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ E +V EF+ G L + R + V + QA++ LH+ + HR
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQALSVLHAQ---GVIHR 144
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
DIKS +ILL ++ + K++DFG E+ GTP ++ P+ + D+
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDI 203
Query: 448 YSFGVVLVEII------------TALKVVDFSRPPNEVNLAALAADRISKGRLDEII--D 493
+S G++++E++ A+K++ + PP NL ++ KG LD ++ D
Sbjct: 204 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS--LKGFLDRLLVRD 261
Query: 494 PL-------IIEHRGHSDAGTLASV 511
P +++H + AG AS+
Sbjct: 262 PAQRATAAELLKHPFLAKAGPPASI 286
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + L +GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 142 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 264 FSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRIKH---RDTDGIQQVVNEIKLISCVSHPN 319
FS+ + +G G+FG VY A ++N +VAIK++ + + + Q ++ E++ + + HPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
++ GC + LV E+ G+ L+ + I V Q +A+LHS
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHSH 134
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY---H 436
+ HRD+K+ NILL K+ DFG + + + GTP ++ P+
Sbjct: 135 ---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAM 186
Query: 437 QNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAA 480
K DV+S G+ +E+ R P N+ A++A
Sbjct: 187 DEGQYDGKVDVWSLGITCIELA--------ERKPPLFNMNAMSA 222
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 255 REIEKATIGFSEKQRLGTGAFGTVYAGKLQ----NDLLVAIKRIKHRDTD-GIQQVVNEI 309
+EI+ + + E +G G FG V G+L+ + VAIK +K T+ ++ ++E
Sbjct: 9 KEIDVSYVKIEEV--IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 66
Query: 310 KLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME- 368
++ HPN++RL G +++ EFM NG L L+ DG I+L +
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL--NDGQFTVIQLVGMLRG 124
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
A + +L HRD+ + NIL++ N KV+DFGLSR + E S T
Sbjct: 125 IASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRF-LEENSSDPTYTSSLG 180
Query: 429 G-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
G + P+ + SD +S+G+V+ E+++
Sbjct: 181 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 27/229 (11%)
Query: 251 IYPYREIEKATIGFSEKQRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQ- 303
+Y E E A + + LG G+FG VY G K + + VAIK + + +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 304 QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI-- 361
+ +NE ++ + ++VRLLG + +++ E M G L +L+ R + + P+
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 362 ------RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
+ +A E A +A+L++ HRD+ + N + +F K+ DFG++R
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR---- 173
Query: 416 EISHISTAPQGTPG-----YLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+I +G G ++ P+ ++ + SDV+SFGVVL EI T
Sbjct: 174 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 273 GAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISC--VSHPNLVRLLGCSIER 330
G FG V+ +L N+ VA+K +D Q NE ++ S + H N+++ +G +R
Sbjct: 35 GRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQ---NEYEVYSLPGMKHENILQFIGAE-KR 89
Query: 331 GEQI-----LVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI----- 380
G + L+ F G+L L + + +SW +A A+ +A+LH I
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 381 --NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ-GTPGYLDPQYHQ 437
P I HRDIKS N+LL N + +ADFGL+ S T Q GT Y+ P+ +
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 438 ---NFHLSD--KSDVYSFGVVLVEIITALKVVD 465
NF + D+Y+ G+VL E+ + D
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 20/242 (8%)
Query: 232 ARKSTKRCLKEARGISNIPIYPYREIEKATI-------GFSEKQRLGTGAFGTVYAGKL- 283
RK T R L + R + P+ P E + F + + LG+GAFGTVY G
Sbjct: 13 VRKRTLRRLLQERELVE-PLTPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWI 71
Query: 284 ----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYE 338
+ + VAI ++ + +++++E +++ V +P++ RLLG + Q L+ +
Sbjct: 72 PEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQ 130
Query: 339 FMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDY 398
MP G L ++ RE D + L ++ A+ + +L + + HRD+ + N+L+
Sbjct: 131 LMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKT 186
Query: 399 NFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEI 457
K+ DFGL++ LG E + + + ++ + + + +SDV+S+GV + E+
Sbjct: 187 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 246
Query: 458 IT 459
+T
Sbjct: 247 MT 248
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 12/192 (6%)
Query: 273 GAFGTVY-AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSIERG 331
G FG VY A + +L A K I + + ++ + EI +++ HPN+V+LL
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 332 EQILVYEFMPNGTL-CQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIK 390
++ EF G + L+ ER L+ V +T A+ +LH + I HRD+K
Sbjct: 81 NLWILIEFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLK 135
Query: 391 SSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY-----HQNFHLSDKS 445
+ NIL + K+ADFG+S + GTP ++ P+ ++ K+
Sbjct: 136 AGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 195
Query: 446 DVYSFGVVLVEI 457
DV+S G+ L+E+
Sbjct: 196 DVWSLGITLIEM 207
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFG ++ LG E + + + ++ +
Sbjct: 139 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFG ++ LG E + + + ++ +
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 18/241 (7%)
Query: 258 EKATIG------FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEI 309
+KA +G F LG G G V + + L+ +++ H + Q++ E+
Sbjct: 6 QKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIREL 65
Query: 310 KLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET 369
+++ + P +V G GE + E M G+L Q L+ + + I V++
Sbjct: 66 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSIAV 123
Query: 370 AQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG 429
+ +A+L I HRD+K SNIL++ + K+ DFG+S I ++ + GT
Sbjct: 124 LRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRS 178
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
Y+ P+ Q H S +SD++S G+ LVE+ + PP+ L A+ + G
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIP---PPDAKELEAIFGRPVVDGEEG 235
Query: 490 E 490
E
Sbjct: 236 E 236
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFG ++ LG E + + + ++ +
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + L +GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 142 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLV 321
F + LG G G V+ + LV +++ H + Q++ E++++ + P +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G GE + E M G+L Q L++ + I V++ + + +L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHL 441
I HRD+K SNIL++ + K+ DFG+S I ++ + GT Y+ P+ Q H
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 442 SDKSDVYSFGVVLVEI------ITALKVVDFSRPP 470
S +SD++S G+ LVE+ I + SRPP
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPP 215
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 270 LGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDG--IQQVVNEIKLISCVSHPNLVRL 323
LG G FG+V G L+ + L VA+K +K ++ I++ ++E + SHPN++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 324 LGCSIERGEQ-----ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIA-HLH 377
LG IE Q +++ FM G L +L R + I L ++ IA +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
N HRD+ + N +L + VADFGLS+ +I QG + ++
Sbjct: 162 YLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK----KIYSGDYYRQGRIAKMPVKWIA 217
Query: 438 NFHLSD-----KSDVYSFGVVLVEIIT 459
L+D KSDV++FGV + EI T
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFG ++ LG E + + + ++ +
Sbjct: 142 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + L +GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFGL++ LG E + + + ++ +
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 35/243 (14%)
Query: 247 SNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHR-DT 299
+ +P E + + F + LG GAFG V GK L VA+K +K
Sbjct: 18 TQLPYNEKWEFPRNNLQFG--KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 75
Query: 300 DGIQQVVNEIKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQR------- 351
D + +++E+K++S + H N+V LLG G +++ E+ G L L+R
Sbjct: 76 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLG 135
Query: 352 ------------ERGDGLSWPIR--LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLD 397
++ DG +R L + + AQ +A L S HRD+ + N+LL
Sbjct: 136 PSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 192
Query: 398 YNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVE 456
+K+ DFGL+R M + ++I P ++ P+ + + +SDV+S+G++L E
Sbjct: 193 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 252
Query: 457 IIT 459
I +
Sbjct: 253 IFS 255
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFG ++ LG E + + + ++ +
Sbjct: 137 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 107/203 (52%), Gaps = 12/203 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKL-----QNDLLVAIKRIKHRDT-DGIQQVVNEIKLISCVSH 317
F + + LG+GAFGTVY G + + VAIK ++ + +++++E +++ V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P++ RLLG + Q L+ + MP G L ++ RE D + L ++ A+ + +L
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYH 436
+ + HRD+ + N+L+ K+ DFG ++ LG E + + + ++ +
Sbjct: 135 ---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDV+S+GV + E++T
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 131/296 (44%), Gaps = 44/296 (14%)
Query: 256 EIEKATIGFSEKQR-------LGTGAFGTVYAGKLQNDLLVAIKRIKHRD----TDGIQQ 304
E+E +G S R +G G+F TVY G L + V + + +D Q+
Sbjct: 13 ELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQR 71
Query: 305 VVNEIKLISCVSHPNLVRLLGC--SIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWP 360
E + + + HPN+VR S +G++ +LV E +GTL +L+R + +
Sbjct: 72 FKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIK-- 129
Query: 361 IRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRLGMTEISH 419
+ + + + + LH+ PPI HRD+K NI + S K+ D GL+ L +
Sbjct: 130 VLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR---AS 185
Query: 420 ISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALA 479
+ A GTP + P+ ++ + DVY+FG +E T+ P +E AA
Sbjct: 186 FAKAVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATS------EYPYSECQNAAQI 238
Query: 480 ADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEV 535
R++ G + P + ++ +V E+ C+ ++D R S+ ++
Sbjct: 239 YRRVTSG-----VKPASFDK---------VAIPEVKEIIEGCIRQNKDERYSIKDL 280
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + +GTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E+MP G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D KVADFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 27/211 (12%)
Query: 267 KQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGC 326
++ +G G FG V+ GK + + VA+K R+ + EI + H N++ +
Sbjct: 11 QESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREA-EIYQTVMLRHENILGFIAA 68
Query: 327 SIERG----EQILVYEFMPNGTLCQHLQRERG--DGLSWPIRLTVAMETAQAIAHLHSAI 380
+ + LV ++ +G+L +L R +G+ + +A+ TA +AHLH I
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 123
Query: 381 -----NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLD 432
P I HRD+KS NIL+ N +AD GL+ + I AP GT Y+
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 433 PQY------HQNFHLSDKSDVYSFGVVLVEI 457
P+ ++F ++D+Y+ G+V EI
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 27/211 (12%)
Query: 267 KQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGC 326
++ +G G FG V+ GK + + VA+K R+ + EI + H N++ +
Sbjct: 14 QESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREA-EIYQTVMLRHENILGFIAA 71
Query: 327 SIERG----EQILVYEFMPNGTLCQHLQRERG--DGLSWPIRLTVAMETAQAIAHLHSAI 380
+ + LV ++ +G+L +L R +G+ + +A+ TA +AHLH I
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 126
Query: 381 -----NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLD 432
P I HRD+KS NIL+ N +AD GL+ + I AP GT Y+
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 433 PQY------HQNFHLSDKSDVYSFGVVLVEI 457
P+ ++F ++D+Y+ G+V EI
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + +GTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E+MP G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D KVADFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 27/211 (12%)
Query: 267 KQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGC 326
++ +G G FG V+ GK + + VA+K R+ + EI + H N++ +
Sbjct: 9 QESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREA-EIYQTVMLRHENILGFIAA 66
Query: 327 SIERG----EQILVYEFMPNGTLCQHLQRERG--DGLSWPIRLTVAMETAQAIAHLHSAI 380
+ + LV ++ +G+L +L R +G+ + +A+ TA +AHLH I
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 121
Query: 381 -----NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLD 432
P I HRD+KS NIL+ N +AD GL+ + I AP GT Y+
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 433 PQY------HQNFHLSDKSDVYSFGVVLVEI 457
P+ ++F ++D+Y+ G+V EI
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLV 321
F + LG G G V+ + LV +++ H + Q++ E++++ + P +V
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G GE + E M G+L Q L++ + I V++ + + +L
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 187
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHL 441
I HRD+K SNIL++ + K+ DFG+S I ++ + GT Y+ P+ Q H
Sbjct: 188 --IMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSPERLQGTHY 242
Query: 442 SDKSDVYSFGVVLVEI 457
S +SD++S G+ LVE+
Sbjct: 243 SVQSDIWSMGLSLVEM 258
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 26/234 (11%)
Query: 247 SNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHR-DT 299
+ +P E + + F + LG GAFG V GK L VA+K +K
Sbjct: 33 TQLPYNEKWEFPRNNLQFG--KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 300 DGIQQVVNEIKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRER----- 353
D + +++E+K++S + H N+V LLG G +++ E+ G L L+R+
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 354 -------GDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVAD 406
LS L + + AQ +A L S HRD+ + N+LL +K+ D
Sbjct: 151 DPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGD 207
Query: 407 FGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
FGL+R M + ++I P ++ P+ + + +SDV+S+G++L EI +
Sbjct: 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 27/211 (12%)
Query: 267 KQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGC 326
++ +G G FG V+ GK + + VA+K R+ + EI + H N++ +
Sbjct: 8 QESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREA-EIYQTVMLRHENILGFIAA 65
Query: 327 SIERG----EQILVYEFMPNGTLCQHLQRERG--DGLSWPIRLTVAMETAQAIAHLHSAI 380
+ + LV ++ +G+L +L R +G+ + +A+ TA +AHLH I
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 120
Query: 381 -----NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLD 432
P I HRD+KS NIL+ N +AD GL+ + I AP GT Y+
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 433 PQY------HQNFHLSDKSDVYSFGVVLVEI 457
P+ ++F ++D+Y+ G+V EI
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDT----DGIQQVVN 307
P +I+ F + LG G+FG V+ + + + AIK +K +D D ++ +
Sbjct: 9 PSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLMDDDVECTMV 67
Query: 308 EIKLISCV-SHPNLVRLLGCSIERGEQIL-VYEFMPNGTLCQHLQRERGDGLSWPIRLTV 365
E +++S HP L + C+ + E + V E++ G L H+Q LS R T
Sbjct: 68 EKRVLSLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS---RATF 123
Query: 366 -AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAP 424
A E + LHS I +RD+K NILLD + K+ADFG+ + M + +
Sbjct: 124 YAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC 180
Query: 425 QGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
GTP Y+ P+ + D +SFGV+L E++
Sbjct: 181 -GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 215
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLV 321
F + LG G G V+ + LV +++ H + Q++ E++++ + P +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G GE + E M G+L Q L++ + I V++ + + +L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHL 441
I HRD+K SNIL++ + K+ DFG+S I ++ + GT Y+ P+ Q H
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 442 SDKSDVYSFGVVLVEI 457
S +SD++S G+ LVE+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLV 321
F + LG G G V+ + LV +++ H + Q++ E++++ + P +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G GE + E M G+L Q L++ + I V++ + + +L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHL 441
I HRD+K SNIL++ + K+ DFG+S I ++ + GT Y+ P+ Q H
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 442 SDKSDVYSFGVVLVEI 457
S +SD++S G+ LVE+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLV 321
F + LG G G V+ + LV +++ H + Q++ E++++ + P +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G GE + E M G+L Q L++ + I V++ + + +L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHL 441
I HRD+K SNIL++ + K+ DFG+S I ++ + GT Y+ P+ Q H
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 442 SDKSDVYSFGVVLVEI 457
S +SD++S G+ LVE+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLV 321
F + LG G G V+ + LV +++ H + Q++ E++++ + P +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G GE + E M G+L Q L++ + I V++ + + +L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHL 441
I HRD+K SNIL++ + K+ DFG+S I ++ + GT Y+ P+ Q H
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSPERLQGTHY 180
Query: 442 SDKSDVYSFGVVLVEI 457
S +SD++S G+ LVE+
Sbjct: 181 SVQSDIWSMGLSLVEM 196
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 27/239 (11%)
Query: 270 LGTGAFGTV--YAGKLQND---LLVAIKRIK------HRDTDGIQQVVNEIKLISCVSHP 318
LG G FG V Y ND +VA+K +K HR G +Q EI ++ + H
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRS--GWKQ---EIDILRTLYHE 93
Query: 319 NLVRLLGCSIERGEQIL--VYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHL 376
++++ GC + G L V E++P G+L +L R + L A + + +A+L
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYL 150
Query: 377 HSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT--EISHISTAPQGTPGYLDPQ 434
H+ HRD+ + N+LLD + K+ DFGL++ E + + P+
Sbjct: 151 HAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE 207
Query: 435 YHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLDEIID 493
+ + SDV+SFGV L E++T S P + L +A +++ RL E+++
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQ-SPPTKFLELIGIAQGQMTVLRLTELLE 265
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 8 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+E + + L + + G+ P+ + + Q +A HS
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGM---TEISHISTAPQGTPG-YLDP 433
+ HRD+K N+L++ K+ADFGL+R G+ T + T P L
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 434 QYHQNFHLSDKSDVYSFGVVLVEIIT 459
+Y+ S D++S G + E++T
Sbjct: 182 KYY-----STAVDIWSLGCIFAEMVT 202
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 270 LGTGAFGTVYAGKLQ-NDLLVAIK---RIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G FG V G+ Q VA+K R K R D + ++ EI+ + HP++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 326 CSIERGEQILVYEFMPNGTL----CQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
+ +V E++ G L C+H + E + RL + +A H H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR----RLFQQILSAVDYCHRHMVV- 133
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY-HQNFH 440
HRD+K N+LLD + +K+ADFGLS + M++ + T+ G+P Y P+ +
Sbjct: 134 ----HRDLKPENVLLDAHMNAKIADFGLSNM-MSDGEFLRTSC-GSPNYAAPEVISGRLY 187
Query: 441 LSDKSDVYSFGVVLVEII 458
+ D++S GV+L ++
Sbjct: 188 AGPEVDIWSCGVILYALL 205
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLV 321
F + LG G G V+ + LV +++ H + Q++ E++++ + P +V
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G GE + E M G+L Q L++ + I V++ + + +L
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK 152
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHL 441
I HRD+K SNIL++ + K+ DFG+S I ++ + GT Y+ P+ Q H
Sbjct: 153 --IMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSPERLQGTHY 207
Query: 442 SDKSDVYSFGVVLVEI 457
S +SD++S G+ LVE+
Sbjct: 208 SVQSDIWSMGLSLVEM 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLV 321
F + LG G G V+ + LV +++ H + Q++ E++++ + P +V
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G GE + E M G+L Q L++ + I V++ + + +L
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLRE--K 142
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHL 441
I HRD+K SNIL++ + K+ DFG+S I ++ + GT Y+ P+ Q H
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSPERLQGTHY 199
Query: 442 SDKSDVYSFGVVLVEI 457
S +SD++S G+ LVE+
Sbjct: 200 SVQSDIWSMGLSLVEM 215
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDT----DGIQQVVN 307
P +I+ F + LG G+FG V+ + + + AIK +K +D D ++ +
Sbjct: 8 PSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLMDDDVECTMV 66
Query: 308 EIKLISCV-SHPNLVRLLGCSIERGEQIL-VYEFMPNGTLCQHLQRERGDGLSWPIRLTV 365
E +++S HP L + C+ + E + V E++ G L H+Q LS R T
Sbjct: 67 EKRVLSLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS---RATF 122
Query: 366 -AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAP 424
A E + LHS I +RD+K NILLD + K+ADFG+ + M + +
Sbjct: 123 YAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC 179
Query: 425 QGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
GTP Y+ P+ + D +SFGV+L E++
Sbjct: 180 -GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL---LVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHP 318
F + +++G G +G VY K +N L +VA+K+I+ +T+G+ + EI L+ ++HP
Sbjct: 4 FQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
N+V+LL + LV+E + + L + G+ P+ + + Q +A HS
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K N+L++ K+ADFGL+R + T T Y P+
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLG 176
Query: 439 -FHLSDKSDVYSFGVVLVEIIT 459
+ S D++S G + E++T
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 10/203 (4%)
Query: 264 FSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
F + ++LG G + TVY G + VA+K +K +G + EI L+ + H N+V
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGD---GLSWPIRLTVAMETAQAIAHLHS 378
RL + LV+EFM N R G+ GL + + Q +A H
Sbjct: 67 RLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE 126
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
I HRD+K N+L++ + K+ DFGL+R ++ S+ T Y P
Sbjct: 127 N---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMG 182
Query: 439 FHLSDKS-DVYSFGVVLVEIITA 460
S D++S G +L E+IT
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITG 205
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 17/201 (8%)
Query: 270 LGTGAFGTVYAGKL----QNDLLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G G FG VY G+ QN + AIK + + ++ + E L+ ++HPN++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 325 GCSIE-RGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G + G ++ +M +G L Q ++ + + + ++ ++ A+ + +L
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYLAEQ---K 144
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYH-----QN 438
HRD+ + N +LD +F KVADFGL+R + + + S Q L ++ Q
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLAR-DILDREYYSVQ-QHRHARLPVKWTALESLQT 202
Query: 439 FHLSDKSDVYSFGVVLVEIIT 459
+ + KSDV+SFGV+L E++T
Sbjct: 203 YRFTTKSDVWSFGVLLWELLT 223
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 26/218 (11%)
Query: 241 KEARGISNIPIYPYREIEKATIGFSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDT 299
K+A I +I Y +R++ LGTGAF V A + LVAIK I +
Sbjct: 11 KQAEDIRDI--YDFRDV------------LGTGAFSEVILAEDKRTQKLVAIKCIAKKAL 56
Query: 300 DGIQ-QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLS 358
+G + + NEI ++ + HPN+V L G L+ + + G L + +
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER 116
Query: 359 WPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNIL---LDYNFKSKVADFGLSRLGMT 415
RL + A+ +LH + I HRD+K N+L LD + K ++DFGLS+ M
Sbjct: 117 DASRLI--FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--ME 169
Query: 416 EISHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVV 453
+ + + GTPGY+ P+ S D +S GV+
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 270 LGTGAFGTVYAGKLQNDL------LVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
+G GAFG V+ + L +VA+K +K + +Q E L++ +PN+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQ-------------------RERGDG---LSWP 360
LLG L++E+M G L + L+ R G LS
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 361 IRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
+L +A + A +A+L HRD+ + N L+ N K+ADFGLSR + +
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 421 STAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P ++ P+ + +SDV+++GVVL EI +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + +GTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D KVADFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 47/273 (17%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
F E LG GAFG V + D AIK+I+H + + + +++E+ L++ ++H +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVR 66
Query: 323 LLGCSIERGEQI-------------LVYEFMPNGTL-----CQHLQRERGDGLSWPIRLT 364
+ER + + E+ NGTL ++L ++R + W
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE--YW----R 120
Query: 365 VAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAP 424
+ + +A++++HS I HRD+K NI +D + K+ DFGL++ + +
Sbjct: 121 LFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 425 QGTPGYLD--------------PQYHQNFHLSDKSDVYSFGVVLVEII----TALKVVDF 466
Q PG D H ++K D+YS G++ E+I T ++ V+
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNI 237
Query: 467 SRPPNEVNLAALAADRISKGRLDEIIDPLIIEH 499
+ V++ +K ++++ I L+I+H
Sbjct: 238 LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDH 270
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 17/231 (7%)
Query: 264 FSEKQRLGTGAFGTVYAGK-LQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLV 321
+ ++ +G+GA V A VAIKRI + + +++ EI+ +S HPN+V
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDG------LSWPIRLTVAMETAQAIAH 375
+ + E LV + + G++ ++ G L T+ E + + +
Sbjct: 77 SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 136
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL----GMTEISHISTAPQGTPGYL 431
LH N I HRD+K+ NILL + ++ADFG+S G + + GTP ++
Sbjct: 137 LHK--NGQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 432 DPQYHQNFHLSD-KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAAD 481
P+ + D K+D++SFG+ +E+ T PP +V + L D
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYPPMKVLMLTLQND 243
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHPNLV 321
+ + +++G G +G VY K +VA+KRI+ + +GI + EI L+ + HPN+V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
L+ LV+EFM + + E GL + + +AH H
Sbjct: 83 SLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-- 138
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYHQ-NF 439
I HRD+K N+L++ + K+ADFGL+R G+ S+ T T Y P +
Sbjct: 139 -RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSK 195
Query: 440 HLSDKSDVYSFGVVLVEIITA 460
S D++S G + E+IT
Sbjct: 196 KYSTSVDIWSIGCIFAEMITG 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 22/232 (9%)
Query: 247 SNIPIYPYREIEKATIGFSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHR-DT 299
+ +P E + + F + LG GAFG V GK L VA+K +K
Sbjct: 33 TQLPYNEKWEFPRNNLQFG--KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 300 DGIQQVVNEIKLISCV-SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLS 358
D + +++E+K++S + H N+V LLG G +++ E+ G L L+R + L
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR-KSRVLE 149
Query: 359 WPIRLTVAMETAQA--IAHLHSAINPPI--------YHRDIKSSNILLDYNFKSKVADFG 408
+A TA + H S + + HRD+ + N+LL +K+ DFG
Sbjct: 150 TDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG 209
Query: 409 LSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
L+R M + ++I P ++ P+ + + +SDV+S+G++L EI +
Sbjct: 210 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 17/231 (7%)
Query: 264 FSEKQRLGTGAFGTVYAGK-LQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLV 321
+ ++ +G+GA V A VAIKRI + + +++ EI+ +S HPN+V
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDG------LSWPIRLTVAMETAQAIAH 375
+ + E LV + + G++ ++ G L T+ E + + +
Sbjct: 72 SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 131
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL----GMTEISHISTAPQGTPGYL 431
LH N I HRD+K+ NILL + ++ADFG+S G + + GTP ++
Sbjct: 132 LHK--NGQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 432 DPQYHQNFHLSD-KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAAD 481
P+ + D K+D++SFG+ +E+ T PP +V + L D
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYPPMKVLMLTLQND 238
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHPNLV 321
+ + +++G G +G VY K +VA+KRI+ + +GI + EI L+ + HPN+V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
L+ LV+EFM + + E GL + + +AH H
Sbjct: 83 SLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-- 138
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTPGYLDPQYHQ-NF 439
I HRD+K N+L++ + K+ADFGL+R G+ S+ T T Y P +
Sbjct: 139 -RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSK 195
Query: 440 HLSDKSDVYSFGVVLVEIITA 460
S D++S G + E+IT
Sbjct: 196 KYSTSVDIWSIGCIFAEMITG 216
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 26/218 (11%)
Query: 241 KEARGISNIPIYPYREIEKATIGFSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDT 299
K+A I +I Y +R++ LGTGAF V A + LVAIK I
Sbjct: 11 KQAEDIRDI--YDFRDV------------LGTGAFSEVILAEDKRTQKLVAIKCIAKEAL 56
Query: 300 DGIQ-QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLS 358
+G + + NEI ++ + HPN+V L G L+ + + G L + +
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER 116
Query: 359 WPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNIL---LDYNFKSKVADFGLSRLGMT 415
RL + A+ +LH + I HRD+K N+L LD + K ++DFGLS+ M
Sbjct: 117 DASRLI--FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--ME 169
Query: 416 EISHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVV 453
+ + + GTPGY+ P+ S D +S GV+
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 26/218 (11%)
Query: 241 KEARGISNIPIYPYREIEKATIGFSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDT 299
K+A I +I Y +R++ LGTGAF V A + LVAIK I
Sbjct: 11 KQAEDIRDI--YDFRDV------------LGTGAFSEVILAEDKRTQKLVAIKCIAKEAL 56
Query: 300 DGIQ-QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLS 358
+G + + NEI ++ + HPN+V L G L+ + + G L + +
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER 116
Query: 359 WPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNIL---LDYNFKSKVADFGLSRLGMT 415
RL + A+ +LH + I HRD+K N+L LD + K ++DFGLS+ M
Sbjct: 117 DASRLI--FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--ME 169
Query: 416 EISHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVV 453
+ + + GTPGY+ P+ S D +S GV+
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 38/218 (17%)
Query: 270 LGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNE--IKLISCVSHPNLVRLLG-- 325
+G G +G VY G L ++ VA+K + Q +NE I + + H N+ R +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGD 76
Query: 326 ---CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI-- 380
+ R E +LV E+ PNG+L ++L D W +A + +A+LH+ +
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD---WVSSCRLAHSVTRGLAYLHTELPR 133
Query: 381 ----NPPIYHRDIKSSNILLDYNFKSKVADFGLS---------RLGMTEISHISTAPQGT 427
P I HRD+ S N+L+ + ++DFGLS R G + + IS GT
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV--GT 191
Query: 428 PGYLDPQYHQN-FHLSD------KSDVYSFGVVLVEII 458
Y+ P+ + +L D + D+Y+ G++ EI
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 26/218 (11%)
Query: 241 KEARGISNIPIYPYREIEKATIGFSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDT 299
K+A I +I Y +R++ LGTGAF V A + LVAIK I
Sbjct: 11 KQAEDIRDI--YDFRDV------------LGTGAFSEVILAEDKRTQKLVAIKCIAKEAL 56
Query: 300 DGIQ-QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLS 358
+G + + NEI ++ + HPN+V L G L+ + + G L + +
Sbjct: 57 EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER 116
Query: 359 WPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNIL---LDYNFKSKVADFGLSRLGMT 415
RL + A+ +LH + I HRD+K N+L LD + K ++DFGLS+ M
Sbjct: 117 DASRLI--FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--ME 169
Query: 416 EISHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVV 453
+ + + GTPGY+ P+ S D +S GV+
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 25/207 (12%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LG G FG V YA K L+ +++VA + H + E ++
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH--------TLTENRV 201
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ HP L L V E+ G L HL RER S E
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVS 259
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
A+ +LHS N + +RD+K N++LD + K+ DFGL + G+ + + + T GTP YL
Sbjct: 260 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYL 316
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ ++ D + GVV+ E++
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMM 343
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSH 317
LG G FG V YA K L+ +++VA + H + E +++ H
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH--------TLTENRVLQNSRH 210
Query: 318 PNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
P L L V E+ G L HL RER S E A+ +LH
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLH 268
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
S N + +RD+K N++LD + K+ DFGL + G+ + + + T GTP YL P+ +
Sbjct: 269 SEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLE 325
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D + GVV+ E++
Sbjct: 326 DNDYGRAVDWWGLGVVMYEMM 346
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRI--KHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLG 325
LG G FG VY A + ++ +VA+K + + +G++ Q+ EI++ + + HPN++RL
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+R L+ E+ P G L + LQ + T+ E A A+ + H +
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQ--KSCTFDEQRTATIMEELADALMYCHGK---KVI 145
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRDIK N+LL + K+ADFG S + S GT YL P+ + ++K
Sbjct: 146 HRDIKPENLLLGLKGELKIADFGWS---VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 446 DVYSFGVVLVEIITA 460
D++ GV+ E++
Sbjct: 203 DLWCIGVLCYELLVG 217
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 9/203 (4%)
Query: 269 RLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
++G G+ G V A + VA+K++ R + + NE+ ++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ E +V EF+ G L + R + TV + +A+++LH N + HR
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---TVCLSVLRALSYLH---NQGVIHR 165
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDV 447
DIKS +ILL + + K++DFG E+ GTP ++ P+ + D+
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL-VGTPYWMAPEVISRLPYGTEVDI 224
Query: 448 YSFGVVLVEIITALKVVDFSRPP 470
+S G++++E+I + F+ PP
Sbjct: 225 WSLGIMVIEMIDG-EPPYFNEPP 246
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 270 LGTGAFGTVYAGKLQ-NDLLVAIK---RIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G FG V G+ Q VA+K R K R D + ++ EI+ + HP++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 326 CSIERGEQILVYEFMPNGTL----CQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
+ +V E++ G L C+H + E + RL + +A H H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR----RLFQQILSAVDYCHRHMVV- 133
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY-HQNFH 440
HRD+K N+LLD + +K+ADFGLS + M++ + + G+P Y P+ +
Sbjct: 134 ----HRDLKPENVLLDAHMNAKIADFGLSNM-MSDGEFLRDSC-GSPNYAAPEVISGRLY 187
Query: 441 LSDKSDVYSFGVVLVEII 458
+ D++S GV+L ++
Sbjct: 188 AGPEVDIWSCGVILYALL 205
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 34/239 (14%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHR-DTDGIQQVVNEIKLISCV-SHPNLV 321
LG+GAFG V K + VA+K +K + D+ + +++E+K+++ + SH N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERG---------------------DGLSWP 360
LLG G L++E+ G L +L+ +R + L++
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 361 IRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
L A + A+ + L HRD+ + N+L+ + K+ DFGL+R M++ +++
Sbjct: 173 DLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 421 STAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAAL 478
P ++ P+ + KSDV+S+G++L EI + L V + P + N L
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS-LGVNPYPGIPVDANFYKL 287
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 270 LGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRLL 324
+G G FG V+ G + L VAIK K+ +D + ++ + E + HP++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G E I++ E G L LQ R L + A + + A+A+L S
Sbjct: 83 GVITENPVWIIM-ELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESK---RF 137
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSD 443
HRDI + N+L+ N K+ DFGLSR M + ++ + P ++ P+ +
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 444 KSDVYSFGVVLVEII 458
SDV+ FGV + EI+
Sbjct: 197 ASDVWMFGVCMWEIL 211
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LG G FG V YA K L+ ++++A + H V E ++
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH--------TVTESRV 58
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ HP L L V E+ G L HL RER + E
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVS 116
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
A+ +LHS + +RDIK N++LD + K+ DFGL + G+++ + + T GTP YL
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYL 172
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ ++ D + GVV+ E++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 270 LGTGAFGTVY---AGKLQND---LLVAIKRIKHRDTDG-IQQVVNEIKLISCVSHPNLVR 322
LG G FG V A L+ VA+K +K + ++ +++E ++ V+HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDG----------------------LSWP 360
L G + G +L+ E+ G+L L+ R G L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 361 IRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
++ A + +Q + +L + HRD+ + NIL+ K K++DFGLSR E S++
Sbjct: 151 DLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 421 STAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P ++ + + + +SDV+SFGV+L EI+T
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDL--LVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNL 320
F++ R+G G+FG VY G + N +VAIK I D I+ + EI ++S P +
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
R G ++ + ++ E++ G+ L + L T+ E + + +LHS
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSER 136
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLS-RLGMTEISHISTAPQGTPGYLDPQYHQNF 439
HRDIK++N+LL K+ADFG++ +L T+I GTP ++ P+ +
Sbjct: 137 K---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV--GTPFWMAPEVIKQS 191
Query: 440 HLSDKSDVYSFGVVLVEIITALKVVDFSRPPN 471
K+D++S G+ +E+ PPN
Sbjct: 192 AYDFKADIWSLGITAIELAKG-------EPPN 216
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E+ P G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+++D KV DFGL++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LG G FG V YA K L+ ++++A + H V E ++
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH--------TVTESRV 61
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ HP L L V E+ G L HL RER + E
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVS 119
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
A+ +LHS + +RDIK N++LD + K+ DFGL + G+++ + + T GTP YL
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYL 175
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ ++ D + GVV+ E++
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMM 202
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 270 LGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRLL 324
+G G FG V+ G + L VAIK K+ +D + ++ + E + HP++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G E I++ E G L LQ R L + A + + A+A+L S
Sbjct: 81 GVITENPVWIIM-ELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---RF 135
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSD 443
HRDI + N+L+ N K+ DFGLSR M + ++ + P ++ P+ +
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 444 KSDVYSFGVVLVEII 458
SDV+ FGV + EI+
Sbjct: 195 ASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 270 LGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRLL 324
+G G FG V+ G + L VAIK K+ +D + ++ + E + HP++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G E I++ E G L LQ R L + A + + A+A+L S
Sbjct: 80 GVITENPVWIIM-ELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---RF 134
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSD 443
HRDI + N+L+ N K+ DFGLSR M + ++ + P ++ P+ +
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 444 KSDVYSFGVVLVEII 458
SDV+ FGV + EI+
Sbjct: 194 ASDVWMFGVCMWEIL 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LG G FG V YA K L+ ++++A + H V E ++
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH--------TVTESRV 58
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ HP L L V E+ G L HL RER + E
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVS 116
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
A+ +LHS + +RDIK N++LD + K+ DFGL + G+++ + + T GTP YL
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYL 172
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ ++ D + GVV+ E++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 270 LGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRLL 324
+G G FG V+ G + L VAIK K+ +D + ++ + E + HP++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G E I++ E G L LQ R L + A + + A+A+L S
Sbjct: 106 GVITENPVWIIM-ELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESK---RF 160
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSD 443
HRDI + N+L+ N K+ DFGLSR M + ++ + P ++ P+ +
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 444 KSDVYSFGVVLVEII 458
SDV+ FGV + EI+
Sbjct: 220 ASDVWMFGVCMWEIL 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 270 LGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRLL 324
+G G FG V+ G + L VAIK K+ +D + ++ + E + HP++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G E I++ E G L LQ R L + A + + A+A+L S
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSD 443
HRDI + N+L+ N K+ DFGLSR M + ++ + P ++ P+ +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 444 KSDVYSFGVVLVEII 458
SDV+ FGV + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 270 LGTGAFGTVYAGKL----QNDLLVAIKRIKHRDTDGIQQVVN---EIKLISCVSHPNLVR 322
LG G+FG V+ K L A+K +K + T ++ V E ++ V+HP +V+
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLK-KATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINP 382
L G+ L+ +F+ G L L +E ++ +A E A A+ HLHS
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLA-ELALALDHLHSL--- 145
Query: 383 PIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ--GTPGYLDPQYHQNFH 440
I +RD+K NILLD K+ DFGLS+ I H A GT Y+ P+
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 441 LSDKSDVYSFGVVLVEIITA 460
+ +D +SFGV++ E++T
Sbjct: 203 HTQSADWWSFGVLMFEMLTG 222
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 270 LGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRLL 324
+G G FG V+ G + L VAIK K+ +D + ++ + E + HP++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G E I++ E G L LQ R L + A + + A+A+L S
Sbjct: 75 GVITENPVWIIM-ELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK---RF 129
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSD 443
HRDI + N+L+ N K+ DFGLSR M + ++ + P ++ P+ +
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 444 KSDVYSFGVVLVEII 458
SDV+ FGV + EI+
Sbjct: 189 ASDVWMFGVCMWEIL 203
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 270 LGTGAFGTVYAGKL----QNDLLVAIKRIKHRDTDGIQQVVN---EIKLISCVSHPNLVR 322
LG G+FG V+ K L A+K +K + T ++ V E ++ V+HP +V+
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLK-KATLKVRDRVRTKMERDILVEVNHPFIVK 91
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINP 382
L G+ L+ +F+ G L L +E ++ +A E A A+ HLHS
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLA-ELALALDHLHSL--- 146
Query: 383 PIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ--GTPGYLDPQYHQNFH 440
I +RD+K NILLD K+ DFGLS+ I H A GT Y+ P+
Sbjct: 147 GIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRG 203
Query: 441 LSDKSDVYSFGVVLVEIITA 460
+ +D +SFGV++ E++T
Sbjct: 204 HTQSADWWSFGVLMFEMLTG 223
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 264 FSEKQRLGTGAFGTVYAGK-LQNDLLVAIK--RIKHRDTDGIQQVVNEIKLISCVSHPNL 320
F + +G G +G VY G+ ++ L AIK + + + I+Q +N +K S H N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS--HHRNI 83
Query: 321 VRLLGCSIERG------EQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIA 374
G I++ + LV EF G++ ++ +G+ L + E + ++
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQ 434
HLH + HRDIK N+LL N + K+ DFG+S + +T GTP ++ P+
Sbjct: 144 HLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF-IGTPYWMAPE 199
Query: 435 Y-----HQNFHLSDKSDVYSFGVVLVEI 457
+ + KSD++S G+ +E+
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 95
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
V+ P LV+L + +V E+ P G + HL+ R S P A +
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 153
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D KVADFG ++ + + GTP YL
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYL 206
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 14/221 (6%)
Query: 257 IEKATIG-FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKH---RDTDGIQQVVNEIKL 311
I K IG + ++ LG G+FG V A + VA+K I + +D +V EI
Sbjct: 3 ISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISY 62
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ + HP++++L + ++V E+ G L ++ ++ R + A
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAI 121
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
H H I HRD+K N+LLD N K+ADFGLS + MT+ + + T+ G+P Y
Sbjct: 122 EYCHRHK-----IVHRDLKPENLLLDDNLNVKIADFGLSNI-MTDGNFLKTSC-GSPNYA 174
Query: 432 DPQY-HQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPN 471
P+ + + + DV+S G+VL ++ D PN
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN 215
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 270 LGTGAFGTVYAGKL----QNDLLVAIKRIKHRDTDGIQQVVNEIK--LISCVSHPNLVRL 323
LG G+FG V+ K L A+K +K +V +++ ++ V+HP +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G+ L+ +F+ G L L +E ++ +A E A A+ HLHS
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLA-ELALALDHLHSL---G 146
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ--GTPGYLDPQYHQNFHL 441
I +RD+K NILLD K+ DFGLS+ I H A GT Y+ P+
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 442 SDKSDVYSFGVVLVEIITA 460
+ +D +SFGV++ E++T
Sbjct: 204 TQSADWWSFGVLMFEMLTG 222
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV--SHPNLVRLLGCS 327
+G G +G V+ G Q + VA+K RD + E +L + V H N++ +
Sbjct: 45 VGKGRYGEVWRGSWQGEN-VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 100
Query: 328 I----ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI--- 380
+ + L+ + G+L +LQ D +S L + + A +AHLH I
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFGT 157
Query: 381 --NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTA--PQ-GTPGYLDPQY 435
P I HRD+KS NIL+ N + +AD GL+ + + + P+ GT Y+ P+
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 436 HQN------FHLSDKSDVYSFGVVLVEI---ITALKVVDFSRPP 470
F + D+++FG+VL E+ + + +V+ +PP
Sbjct: 218 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 261
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 270 LGTGAFGTVYAGKLQ-NDLLVAIK---RIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G FG V GK + VA+K R K R D + ++ EI+ + HP++++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ +V E++ G L ++ + RL + + H H +
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVV----- 138
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY-HQNFHLSDK 444
HRD+K N+LLD + +K+ADFGLS M G+P Y P+ + +
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLS--NMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPE 196
Query: 445 SDVYSFGVVLVEII 458
D++S GV+L ++
Sbjct: 197 VDIWSSGVILYALL 210
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV--SHPNLVRLLGCS 327
+G G +G V+ G Q + VA+K RD + E +L + V H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQGEN-VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 71
Query: 328 I----ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI--- 380
+ + L+ + G+L +LQ D +S L + + A +AHLH I
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFGT 128
Query: 381 --NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTA--PQ-GTPGYLDPQY 435
P I HRD+KS NIL+ N + +AD GL+ + + + P+ GT Y+ P+
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 436 HQN------FHLSDKSDVYSFGVVLVEI---ITALKVVDFSRPP 470
F + D+++FG+VL E+ + + +V+ +PP
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 270 LGTGAFGTVYAGKLQ-NDLLVAIKRIKHR---DTDGIQQVVNEIK-LISCVSHPNLVRLL 324
+G G+FG V + + ++ A+K ++ + + +++E L+ V HP LV L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+ V +++ G L HLQRER P A E A A+ +LHS +N I
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERC--FLEPRARFYAAEIASALGYLHS-LN--I 160
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ--GTPGYLDPQYHQNFHLS 442
+RD+K NILLD + DFGL + I H ST GTP YL P+
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEVLHKQPYD 217
Query: 443 DKSDVYSFGVVLVEIITAL 461
D + G VL E++ L
Sbjct: 218 RTVDWWCLGAVLYEMLYGL 236
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 30/224 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV--SHPNLVRLLGCS 327
+G G +G V+ G L + VA+K RD Q E ++ + V H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 328 I----ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI--- 380
+ + L+ + +G+L LQR+ L + L +A+ A +AHLH I
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQ---TLEPHLALRLAVSAACGLAHLHVEIFGT 128
Query: 381 --NPPIYHRDIKSSNILLDYNFKSKVADFGLS--------RLGMTEISHISTAPQGTPGY 430
P I HRD KS N+L+ N + +AD GL+ L + + T P
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEV 188
Query: 431 LDPQYHQN-FHLSDKSDVYSFGVVLVEIITALKV---VDFSRPP 470
LD Q + F +D+++FG+VL EI V V+ RPP
Sbjct: 189 LDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPP 232
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 95
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 153
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYL 206
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 30/224 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV--SHPNLVRLLGCS 327
+G G +G V+ G Q + VA+K RD + E +L + V H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQGEN-VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 71
Query: 328 I----ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI--- 380
+ + L+ + G+L +LQ D +S L + + A +AHLH I
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFGT 128
Query: 381 --NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTA--PQ-GTPGYLDPQY 435
P I HRD+KS NIL+ N + +AD GL+ + + + P+ GT Y+ P+
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 436 HQN------FHLSDKSDVYSFGVVLVEI---ITALKVVDFSRPP 470
F + D+++FG+VL E+ + + +V+ +PP
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 95
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 153
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 95
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E+ P G + HL+ R S P A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 153
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+++D KV DFG ++ + + GTP YL
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 95
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 153
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E+ P G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+++D KV DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 95
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 153
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 115
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+R S P A +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVL 173
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 174 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 226
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 268 QRLGTGAFGTVYAGKLQ----NDLLVAIKRIKH---RDTDGIQQVVNEIKLISCVSHPNL 320
++LG G+FG V G+ + VA+K +K + + + E+ + + H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RL G + + +V E P G+L L++ +G L + A++ A+ + +L S
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLESK- 134
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQN 438
HRD+ + N+LL K+ DFGL R L + ++ + P + P+ +
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 439 FHLSDKSDVYSFGVVLVEIIT 459
S SD + FGV L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 95
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 153
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 270 LGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRLL 324
+G G FG V+ G + + VAIK K+ +D + ++ + E + HP++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G E I++ E G L LQ R L + A + + A+A+L S
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSD 443
HRDI + N+L+ N K+ DFGLSR M + ++ + P ++ P+ +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 444 KSDVYSFGVVLVEII 458
SDV+ FGV + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 80
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 138
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 139 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYL 191
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEM 217
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 87
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 145
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 146 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 198
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + LCQ +Q E + +S+ + + I HLHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS 144
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPEVVTRYYRAPEVILG 199
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E+I
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 44/257 (17%)
Query: 257 IEKATIGFSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
+E + ++ L G F VY A + + A+KR+ + + + ++ E+ + +
Sbjct: 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKL 82
Query: 316 S-HPNLVRLL-GCSIERGE------QILVYEFMPNGTLCQHLQRERGDG-LSWPIRLTVA 366
S HPN+V+ SI + E + L+ + G L + L++ G LS L +
Sbjct: 83 SGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIF 142
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISH---ISTA 423
+T +A+ H+H PPI HRD+K N+LL K+ DFG T ISH S +
Sbjct: 143 YQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFG----SATTISHYPDYSWS 197
Query: 424 PQ------------GTPGYLDPQ---YHQNFHLSDKSDVYSFGVVL---------VEIIT 459
Q TP Y P+ + NF + +K D+++ G +L E
Sbjct: 198 AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257
Query: 460 ALKVVD--FSRPPNEVN 474
L++V+ +S PP++
Sbjct: 258 KLRIVNGKYSIPPHDTQ 274
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 268 QRLGTGAFGTVYAGKLQ----NDLLVAIKRIKH---RDTDGIQQVVNEIKLISCVSHPNL 320
++LG G+FG V G+ + VA+K +K + + + E+ + + H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RL G + + +V E P G+L L++ +G L + A++ A+ + +L S
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLESKR 141
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQN 438
HRD+ + N+LL K+ DFGL R L + ++ + P + P+ +
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 439 FHLSDKSDVYSFGVVLVEIIT 459
S SD + FGV L E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 268 QRLGTGAFGTVYAGKLQ----NDLLVAIKRIKH---RDTDGIQQVVNEIKLISCVSHPNL 320
++LG G+FG V G+ + VA+K +K + + + E+ + + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RL G + + +V E P G+L L++ +G L + A++ A+ + +L S
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLESK- 130
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQN 438
HRD+ + N+LL K+ DFGL R L + ++ + P + P+ +
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 439 FHLSDKSDVYSFGVVLVEIIT 459
S SD + FGV L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 264 FSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLV 321
F++ +R+G G+FG V+ G + +VAIK I D I+ + EI ++S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
+ G ++ + ++ E++ G+ L+ D T+ E + + +LHS
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQ---IATMLKEILKGLDYLHSEKK 141
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLS-RLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
HRDIK++N+LL K+ADFG++ +L T+I + GTP ++ P+ Q
Sbjct: 142 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV--GTPFWMAPEVIQQSA 196
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPN 471
K+D++S G+ +E+ PPN
Sbjct: 197 YDSKADIWSLGITAIELAKG-------EPPN 220
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 33/220 (15%)
Query: 270 LGTGAFGTVY---AGKLQND---LLVAIKRIKHRDTDG-IQQVVNEIKLISCVSHPNLVR 322
LG G FG V A L+ VA+K +K + ++ +++E ++ V+HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDG----------------------LSWP 360
L G + G +L+ E+ G+L L+ R G L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 361 IRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
++ A + +Q + +L + HRD+ + NIL+ K K++DFGLSR E S +
Sbjct: 151 DLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 421 STAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P ++ + + + +SDV+SFGV+L EI+T
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 264 FSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLV 321
F++ +++G G+FG V+ G + +VAIK I D I+ + EI ++S P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
+ G ++ + ++ E++ G+ L+ D T+ E + + +LHS
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQ---IATILREILKGLDYLHSEKK 125
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLS-RLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
HRDIK++N+LL + + K+ADFG++ +L T+I + GTP ++ P+ +
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV--GTPFWMAPEVIKQSA 180
Query: 441 LSDKSDVYSFGVVLVEI 457
K+D++S G+ +E+
Sbjct: 181 YDSKADIWSLGITAIEL 197
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 33/220 (15%)
Query: 270 LGTGAFGTVY---AGKLQND---LLVAIKRIKHRDTDG-IQQVVNEIKLISCVSHPNLVR 322
LG G FG V A L+ VA+K +K + ++ +++E ++ V+HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDG----------------------LSWP 360
L G + G +L+ E+ G+L L+ R G L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 361 IRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
++ A + +Q + +L + HRD+ + NIL+ K K++DFGLSR E S +
Sbjct: 151 DLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 421 STAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P ++ + + + +SDV+SFGV+L EI+T
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 269 RLGTGAFGTVYAGK-LQNDLLVAIKRIKHR-DTDGIQQVVNEIKL-ISCVSHPNLVRLLG 325
LG GA+G V + + + ++A+KRI+ ++ ++++ ++ + + V P V G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQR--ERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G+ + E M + +L + ++ ++G + I +A+ +A+ HLHS ++
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 174
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTA---PQGTPGYLDPQYHQNFH 440
+ HRD+K SN+L++ + K+ DFG+S + ++ A P P ++P+ +Q +
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGY 234
Query: 441 LSDKSDVYSFGVVLVEI 457
S KSD++S G+ ++E+
Sbjct: 235 -SVKSDIWSLGITMIEL 250
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 268 QRLGTGAFGTVYAGKLQ----NDLLVAIKRIKH---RDTDGIQQVVNEIKLISCVSHPNL 320
++LG G+FG V G+ + VA+K +K + + + E+ + + H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RL G + + +V E P G+L L++ +G L + A++ A+ + +L S
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLESK- 134
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQN 438
HRD+ + N+LL K+ DFGL R L + ++ + P + P+ +
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 439 FHLSDKSDVYSFGVVLVEIIT 459
S SD + FGV L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 268 QRLGTGAFGTVYAGKLQ----NDLLVAIKRIKH---RDTDGIQQVVNEIKLISCVSHPNL 320
++LG G+FG V G+ + VA+K +K + + + E+ + + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RL G + + +V E P G+L L++ +G L + A++ A+ + +L S
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLESK- 130
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQN 438
HRD+ + N+LL K+ DFGL R L + ++ + P + P+ +
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 439 FHLSDKSDVYSFGVVLVEIIT 459
S SD + FGV L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 270 LGTGAFGTVYAGKLQNDLL----VAIKRIK--HRDTDGIQQVVNEIKLISCVSHPNLVRL 323
+G G F V KL +L VA+K I ++ +Q++ E++++ ++HPN+V+L
Sbjct: 15 IGKGNFAKV---KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
LV E+ G + +L W + Q ++ +
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAH-----GWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSD 443
I HRD+K+ N+LLD + K+ADFG S T + + T G+P Y P+ Q
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLDTFC-GSPPYAAPELFQGKKYDG 184
Query: 444 -KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
+ DV+S GV+L +++ S P + NL L +R+ +G+
Sbjct: 185 PEVDVWSLGVILYTLVSG------SLPFDGQNLKEL-RERVLRGK 222
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E+ P G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+++D +V DFGL++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 264 FSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLV 321
F++ +++G G+FG V+ G + +VAIK I D I+ + EI ++S P +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
+ G ++ + ++ E++ G+ L+ D T+ E + + +LHS
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA---TILREILKGLDYLHSEKK 145
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLS-RLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
HRDIK++N+LL + + K+ADFG++ +L T+I + GTP ++ P+ +
Sbjct: 146 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV--GTPFWMAPEVIKQSA 200
Query: 441 LSDKSDVYSFGVVLVEI 457
K+D++S G+ +E+
Sbjct: 201 YDSKADIWSLGITAIEL 217
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + LCQ +Q E + +S+ + + I HLHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS 144
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E+I
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + LCQ +Q E + +S+ + + I HLHS
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS 145
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 146 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 200
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E+I
Sbjct: 201 MGYKENVDIWSVGCIMGEMI 220
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 270 LGTGAFGTV--YAGKLQND---LLVAIKRIKH----RDTDGIQQVVNEIKLISCVSHPNL 320
LG G FG V Y ND +VA+K +K + G Q+ EI+++ + H ++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR---EIEILRTLYHEHI 73
Query: 321 VRLLGCSIERGEQI--LVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
V+ GC ++GE+ LV E++P G+L +L R GL+ L A + + +A+LH+
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR-HCVGLA--QLLLFAQQICEGMAYLHA 130
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG--YLDPQYH 436
HR + + N+LLD + K+ DFGL++ + G + P+
Sbjct: 131 Q---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 187
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ SDV+SFGV L E++T
Sbjct: 188 KECKFYYASDVWSFGVTLYELLT 210
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + LCQ +Q E + +S+ + + I HLHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS 144
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E+I
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 264 FSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLV 321
F++ +++G G+FG V+ G + +VAIK I D I+ + EI ++S P +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
+ G ++ + ++ E++ G+ L+ D T+ E + + +LHS
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQ---IATILREILKGLDYLHSEKK 140
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLS-RLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
HRDIK++N+LL + + K+ADFG++ +L T+I GTP ++ P+ +
Sbjct: 141 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV--GTPFWMAPEVIKQSA 195
Query: 441 LSDKSDVYSFGVVLVEI 457
K+D++S G+ +E+
Sbjct: 196 YDSKADIWSLGITAIEL 212
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 270 LGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRLL 324
+G G FG V+ G + + VAIK K+ +D + ++ + E + HP++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G E I++ E G L LQ R L + A + + A+A+L S
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK---RF 512
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSD 443
HRDI + N+L+ N K+ DFGLSR M + ++ + P ++ P+ +
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 444 KSDVYSFGVVLVEII 458
SDV+ FGV + EI+
Sbjct: 572 ASDVWMFGVCMWEIL 586
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LG G FG V YA K L+ +++VA + H + E ++
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH--------TLTENRV 62
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ HP L L V E+ G L HL RER S E
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVS 120
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
A+ +LHS N + +RD+K N++LD + K+ DFGL + G+ + + + GTP YL
Sbjct: 121 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYL 177
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ ++ D + GVV+ E++
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMM 204
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LG G FG V YA K L+ +++VA + H + E ++
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH--------TLTENRV 63
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ HP L L V E+ G L HL RER S E
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVS 121
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
A+ +LHS N + +RD+K N++LD + K+ DFGL + G+ + + + GTP YL
Sbjct: 122 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYL 178
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ ++ D + GVV+ E++
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMM 205
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 270 LGTGAFGTV--YAGKLQND---LLVAIKRIKH----RDTDGIQQVVNEIKLISCVSHPNL 320
LG G FG V Y ND +VA+K +K + G Q+ EI+++ + H ++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR---EIEILRTLYHEHI 72
Query: 321 VRLLGCSIERGEQI--LVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
V+ GC ++GE+ LV E++P G+L +L R GL+ L A + + +A+LH+
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR-HCVGLA--QLLLFAQQICEGMAYLHA 129
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPG--YLDPQYH 436
HR + + N+LLD + K+ DFGL++ + G + P+
Sbjct: 130 Q---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 186
Query: 437 QNFHLSDKSDVYSFGVVLVEIIT 459
+ SDV+SFGV L E++T
Sbjct: 187 KECKFYYASDVWSFGVTLYELLT 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LG G FG V YA K L+ +++VA + H + E ++
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAH--------TLTENRV 61
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ HP L L V E+ G L HL RER S E
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVS 119
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
A+ +LHS N + +RD+K N++LD + K+ DFGL + G+ + + + GTP YL
Sbjct: 120 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYL 176
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ ++ D + GVV+ E++
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMM 203
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 269 RLGTGAFGTVYAGK-LQNDLLVAIKRIKHR-DTDGIQQVVNEIKL-ISCVSHPNLVRLLG 325
LG GA+G V + + + ++A+KRI+ ++ ++++ ++ + + V P V G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQR--ERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G+ + E M + +L + ++ ++G + I +A+ +A+ HLHS ++
Sbjct: 74 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 130
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTA---PQGTPGYLDPQYHQNFH 440
+ HRD+K SN+L++ + K+ DFG+S + +++ A P P ++P+ +Q +
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 441 LSDKSDVYSFGVVLVEI 457
S KSD++S G+ ++E+
Sbjct: 191 -SVKSDIWSLGITMIEL 206
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LG G FG V YA K L+ ++++A + H V E ++
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH--------TVTESRV 63
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ HP L L V E+ G L HL RER + E
Sbjct: 64 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVS 121
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
A+ +LHS + +RDIK N++LD + K+ DFGL + G+++ + + GTP YL
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-GTPEYL 177
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ ++ D + GVV+ E++
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMM 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRL 323
+ LG G+FG V A VA+K I + +D ++ EI + + HP++++L
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
+ E I+V E+ N +QR D +S + A+ + H
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---K 133
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY-HQNFHLS 442
I HRD+K N+LLD + K+ADFGLS + MT+ + + T+ G+P Y P+ +
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKTSC-GSPNYAAPEVISGKLYAG 191
Query: 443 DKSDVYSFGVVL 454
+ DV+S GV+L
Sbjct: 192 PEVDVWSCGVIL 203
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 123/273 (45%), Gaps = 47/273 (17%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
F E LG GAFG V + D AIK+I+H + + + +++E+ L++ ++H +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVR 66
Query: 323 LLGCSIERGEQI-------------LVYEFMPNGTL-----CQHLQRERGDGLSWPIRLT 364
+ER + + E+ N TL ++L ++R + W
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE--YW----R 120
Query: 365 VAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAP 424
+ + +A++++HS I HRD+K NI +D + K+ DFGL++ + +
Sbjct: 121 LFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 425 QGTPGYLD--------------PQYHQNFHLSDKSDVYSFGVVLVEII----TALKVVDF 466
Q PG D H ++K D+YS G++ E+I T ++ V+
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNI 237
Query: 467 SRPPNEVNLAALAADRISKGRLDEIIDPLIIEH 499
+ V++ +K ++++ I L+I+H
Sbjct: 238 LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDH 270
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LG G FG V YA K L+ ++++A + H V E ++
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH--------TVTESRV 58
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ HP L L V E+ G L HL RER + E
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVS 116
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
A+ +LHS + +RDIK N++LD + K+ DFGL + G+++ + + GTP YL
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-GTPEYL 172
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ ++ D + GVV+ E++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 264 FSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLV 321
F++ +++G G+FG V+ G + +VAIK I D I+ + EI ++S P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
+ G ++ + ++ E++ G+ L+ D T+ E + + +LHS
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQ---IATILREILKGLDYLHSEKK 125
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLS-RLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
HRDIK++N+LL + + K+ADFG++ +L T+I GTP ++ P+ +
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV--GTPFWMAPEVIKQSA 180
Query: 441 LSDKSDVYSFGVVLVEI 457
K+D++S G+ +E+
Sbjct: 181 YDSKADIWSLGITAIEL 197
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 18/200 (9%)
Query: 270 LGTGAFGTVY----AGKLQNDLLVAIKRIKHRDTDGIQQVVN---EIKLISCVSHPNLVR 322
LG G+FG V+ + + L A+K +K + T ++ V E +++ V+HP +V+
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLK-KATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINP 382
L G+ L+ +F+ G L L +E ++ +A E A + HLHS
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM-FTEEDVKFYLA-ELALGLDHLHSL--- 149
Query: 383 PIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ--GTPGYLDPQYHQNFH 440
I +RD+K NILLD K+ DFGLS+ I H A GT Y+ P+
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEVVNRQG 206
Query: 441 LSDKSDVYSFGVVLVEIITA 460
S +D +S+GV++ E++T
Sbjct: 207 HSHSADWWSYGVLMFEMLTG 226
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 270 LGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRLL 324
+G G FG V+ G + + VAIK K+ +D + ++ + E + HP++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G E I++ E G L LQ R L + A + + A+A+L S
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP--GYLDPQYHQNFHLS 442
HRDI + N+L+ N K+ DFGLSR E S A +G ++ P+ +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 443 DKSDVYSFGVVLVEII 458
SDV+ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRL 323
+ LG G+FG V A VA+K I + +D ++ EI + + HP++++L
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
+ E I+V E+ N +QR D +S + A+ + H
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---K 132
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY-HQNFHLS 442
I HRD+K N+LLD + K+ADFGLS + MT+ + + T+ G+P Y P+ +
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKTS-CGSPNYAAPEVISGKLYAG 190
Query: 443 DKSDVYSFGVVL 454
+ DV+S GV+L
Sbjct: 191 PEVDVWSCGVIL 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LG G FG V YA K L+ ++++A + H V E ++
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH--------TVTESRV 58
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ HP L L V E+ G L HL RER + E
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVS 116
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
A+ +LHS + +RDIK N++LD + K+ DFGL + G+++ + + GTP YL
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-GTPEYL 172
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ ++ D + GVV+ E++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V +A K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 268 QRLGTGAFGTVYAGKLQ----NDLLVAIKRIKH---RDTDGIQQVVNEIKLISCVSHPNL 320
++LG G+FG V G+ + VA+K +K + + + E+ + + H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RL G + + +V E P G+L L++ +G L + A++ A+ + +L S
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLESKR 141
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQN 438
HRD+ + N+LL K+ DFGL R L + + + P + P+ +
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 439 FHLSDKSDVYSFGVVLVEIIT 459
S SD + FGV L E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 265 SEKQRLGTGAFGTVYA-GKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRL 323
S+ + LG G FG V+ + L +A K IK R ++V NEI +++ + H NL++L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
+ + +LV E++ G L + E + L+ + + + I H+H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYN-LTELDTILFMKQICEGIRHMHQMY--- 207
Query: 384 IYHRDIKSSNIL-LDYNFKS-KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHL 441
I H D+K NIL ++ + K K+ DFGL+R + GTP +L P+ +
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLAR--RYKPREKLKVNFGTPEFLAPEVVNYDFV 265
Query: 442 SDKSDVYSFGVVLVEIITAL 461
S +D++S GV+ +++ L
Sbjct: 266 SFPTDMWSVGVIAYMLLSGL 285
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E+ P G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+++D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V +A K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 268 QRLGTGAFGTVYAGKLQ----NDLLVAIKRIKH---RDTDGIQQVVNEIKLISCVSHPNL 320
++LG G+FG V G+ + VA+K +K + + + E+ + + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RL G + + +V E P G+L L++ +G L + A++ A+ + +L S
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLESK- 130
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQN 438
HRD+ + N+LL K+ DFGL R L + + + P + P+ +
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 439 FHLSDKSDVYSFGVVLVEIIT 459
S SD + FGV L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 105/202 (51%), Gaps = 18/202 (8%)
Query: 270 LGTGAFGTV----YAGKLQND-LLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRL 323
LG G FG V Y + N VA+K +K + I + EI+++ + H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 324 LG-CSIERGEQI-LVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G C+ + G I L+ EF+P+G+L ++L + + + ++ +L A++ + + +L S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR-- 145
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT--EISHISTAPQGTPGYLDPQ--YHQ 437
HRD+ + N+L++ + K+ DFGL++ T E + + P+
Sbjct: 146 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 204
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
F+++ SDV+SFGV L E++T
Sbjct: 205 KFYIA--SDVWSFGVTLHELLT 224
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V +A K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R S P A +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRL 323
+ LG G+FG V A VA+K I + +D ++ EI + + HP++++L
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
+ E I+V E+ N +QR++ R + +A H H
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-ARRFFQQIISAVEYCHRHK----- 123
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY-HQNFHLS 442
I HRD+K N+LLD + K+ADFGLS + MT+ + + T+ G+P Y P+ +
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKTS-CGSPNYAAPEVISGKLYAG 181
Query: 443 DKSDVYSFGVVL 454
+ DV+S GV+L
Sbjct: 182 PEVDVWSCGVIL 193
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LG G FG V YA K L+ ++++A + H V E ++
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH--------TVTESRV 58
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ HP L L V E+ G L HL RER + E
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVS 116
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
A+ +LHS + +RDIK N++LD + K+ DFGL + G+++ + + GTP YL
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-GTPEYL 172
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ ++ D + GVV+ E++
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMM 199
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 95
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P L +L + +V E+ P G + HL+ R S P A +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 153
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+++D KV DFG ++ + + GTP YL
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRL 323
+ LG G+FG V A VA+K I + +D ++ EI + + HP++++L
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
+ E I+V E+ N +QR++ R + +A H H
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-ARRFFQQIISAVEYCHRHK----- 127
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY-HQNFHLS 442
I HRD+K N+LLD + K+ADFGLS + MT+ + + T+ G+P Y P+ +
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKTS-CGSPNYAAPEVISGKLYAG 185
Query: 443 DKSDVYSFGVVL 454
+ DV+S GV+L
Sbjct: 186 PEVDVWSCGVIL 197
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 33/208 (15%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDG-------------IQQVVNEIKLIS 313
++LG+GA+G V K +N AIK IK D +++ NEI L+
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 314 CVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQH-LQRERGDGLSWPIRLTVAMETAQA 372
+ HPN+++L ++ LV EF G L + + R + D + +
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA---NIMKQILSG 158
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYN---FKSKVADFGLSRLGMTEI---SHISTAPQG 426
I +LH I HRDIK NILL+ K+ DFGLS + + TA
Sbjct: 159 ICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYI 215
Query: 427 TPGYLDPQYHQNFHLSDKSDVYSFGVVL 454
P L +Y++ K DV+S GV++
Sbjct: 216 APEVLKKKYNE------KCDVWSCGVIM 237
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 270 LGTGAFGTVYAGKLQND-----LLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRL 323
LG G FG V + + VA+K +K + I + EI+++ + H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 324 LG-CSIERGEQI-LVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
G C+ + G I L+ EF+P+G+L ++L + + + ++ +L A++ + + +L S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR-- 133
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT--EISHISTAPQGTPGYLDPQYHQNF 439
HRD+ + N+L++ + K+ DFGL++ T E + + P+
Sbjct: 134 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 440 HLSDKSDVYSFGVVLVEIIT 459
SDV+SFGV L E++T
Sbjct: 193 KFYIASDVWSFGVTLHELLT 212
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E+ P G + HL+ R P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFXEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+++D KV DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 95
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P L +L + +V E+ P G + HL+ R S P A +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVL 153
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+++D KV DFG ++ + + GTP YL
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 95
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R P A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFXEPHARFYAAQIVL 153
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFXEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFXEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 87
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++P G + HL+ R P A +
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFXEPHARFYAAQIVL 145
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 146 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 198
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + LCQ +Q E + +S+ + + I HLHS
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS 149
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 150 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 204
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 205 MGYKENVDLWSVGCIMGEMV 224
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLL----VAIKRIK--HRDTDGIQQVVNEIKLISCVSHPNLVRL 323
+G G F V KL +L VA+K I ++ +Q++ E++++ ++HPN+V+L
Sbjct: 22 IGKGNFAKV---KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
LV E+ G + +L R + R V+ A+ + H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKF 133
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
I HRD+K+ N+LLD + K+ADFG S T + + T G+P Y P+ Q
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLDTFC-GSPPYAAPELFQGKK 188
Query: 441 LSD-KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
+ DV+S GV+L +++ S P + NL L +R+ +G+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKEL-RERVLRGK 229
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + LCQ +Q E + +S+ + + I HLH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 181
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 182 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 236
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLL----VAIKRIK--HRDTDGIQQVVNEIKLISCVSHPNLVRL 323
+G G F V KL +L VA+K I ++ +Q++ E++++ ++HPN+V+L
Sbjct: 22 IGKGNFAKV---KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
LV E+ G + +L R + R V+ A+ + H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKF 133
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
I HRD+K+ N+LLD + K+ADFG S T + + T G+P Y P+ Q
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLDTFC-GSPPYAAPELFQGKK 188
Query: 441 LSD-KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
+ DV+S GV+L +++ S P + NL L +R+ +G+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKEL-RERVLRGK 229
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + LCQ +Q E + +S+ + + I HLHS
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS 138
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 139 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 193
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 194 MGYKENVDLWSVGCIMGEMV 213
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLXGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 266 EKQRLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
E + LG+G FGTV G Q + V I + + D +++ E ++ + +P +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 321 VRLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
VR++G C E +LV E G L ++LQ+ R I L + + + +L +
Sbjct: 69 VRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV--HQVSMGMKYLEES 124
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP--GYLDPQYHQ 437
HRD+ + N+LL +K++DFGLS+ + ++ G + P+
Sbjct: 125 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 181
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV+SFGV++ E +
Sbjct: 182 YYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLAGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLL----VAIKRIK--HRDTDGIQQVVNEIKLISCVSHPNLVRL 323
+G G F V KL +L VA+K I ++ +Q++ E++++ ++HPN+V+L
Sbjct: 22 IGKGNFAKV---KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
LV E+ G + +L R + R V+ A+ + H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKF 133
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
I HRD+K+ N+LLD + K+ADFG S + A G P Y P+ Q
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 441 LSD-KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
+ DV+S GV+L +++ S P + NL L +R+ +G+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKEL-RERVLRGK 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 34/230 (14%)
Query: 270 LGTGAFGTVYAGKLQNDLL----VAIKRIK--HRDTDGIQQVVNEIKLISCVSHPNLVRL 323
+G G F V KL +L VA++ I ++ +Q++ E++++ ++HPN+V+L
Sbjct: 22 IGKGNFAKV---KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
LV E+ G + +L R + R V+ A+ + H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKF 133
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ--GTPGYLDPQYHQN 438
I HRD+K+ N+LLD + K+ADFG S E + + + G+P Y P+ Q
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDEFCGSPPYAAPELFQG 186
Query: 439 FHLSD-KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
+ DV+S GV+L +++ S P + NL L +R+ +G+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKEL-RERVLRGK 229
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 266 EKQRLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
E + LG+G FGTV G Q + V I + + D +++ E ++ + +P +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 321 VRLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
VR++G C E +LV E G L ++LQ+ R I L + + + +L +
Sbjct: 75 VRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV--HQVSMGMKYLEES 130
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP--GYLDPQYHQ 437
HRD+ + N+LL +K++DFGLS+ + ++ G + P+
Sbjct: 131 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 187
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV+SFGV++ E +
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 266 EKQRLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
E + LG+G FGTV G Q + V I + + D +++ E ++ + +P +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 321 VRLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
VR++G C E +LV E G L ++LQ+ R I L + + + +L +
Sbjct: 89 VRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV--HQVSMGMKYLEES 144
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP--GYLDPQYHQ 437
HRD+ + N+LL +K++DFGLS+ + ++ G + P+
Sbjct: 145 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 201
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV+SFGV++ E +
Sbjct: 202 YYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 12/195 (6%)
Query: 270 LGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRLL 324
+G G FG V+ G + + VAIK K+ +D + ++ + E + HP++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G E I++ E G L LQ R L + A + + A+A+L S
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSD 443
HRDI + N+L+ K+ DFGLSR M + ++ + P ++ P+ +
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 444 KSDVYSFGVVLVEII 458
SDV+ FGV + EI+
Sbjct: 192 ASDVWMFGVCMWEIL 206
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 266 EKQRLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
E + LG+G FGTV G Q + V I + + D +++ E ++ + +P +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 321 VRLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
VR++G C E +LV E G L ++LQ+ R I L + + + +L +
Sbjct: 71 VRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV--HQVSMGMKYLEES 126
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP--GYLDPQYHQ 437
HRD+ + N+LL +K++DFGLS+ + ++ G + P+
Sbjct: 127 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 183
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV+SFGV++ E +
Sbjct: 184 YYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 266 EKQRLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
E + LG+G FGTV G Q + V I + + D +++ E ++ + +P +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 321 VRLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
VR++G C E +LV E G L ++LQ+ R I L + + + +L +
Sbjct: 81 VRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV--HQVSMGMKYLEES 136
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP--GYLDPQYHQ 437
HRD+ + N+LL +K++DFGLS+ + ++ G + P+
Sbjct: 137 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV+SFGV++ E +
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 115
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVL 173
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 174 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYL 226
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 268 QRLGTGAFGTV------YAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLV 321
+ LG GAF V AG+ +++ K++ RD Q++ E ++ + HPN+V
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDH---QKLEREARICRLLKHPNIV 73
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
RL E G L+++ + G L + + RE S + +A+ H H
Sbjct: 74 RLHDSISEEGHHYLIFDLVTGGELFEDIVAREY---YSEADASHCIQQILEAVLHCHQM- 129
Query: 381 NPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
+ HR++K N+LL K K+ADFGL+ + + GTPGYL P+ +
Sbjct: 130 --GVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 438 NFHLSDKSDVYSFGVVL 454
D+++ GV+L
Sbjct: 187 KDPYGKPVDLWACGVIL 203
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + LCQ +Q E + +S+ + + I HLH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 198
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 266 EKQRLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
E + LG+G FGTV G Q + V I + + D +++ E ++ + +P +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 321 VRLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
VR++G C E +LV E G L ++LQ+ R I L + + + +L +
Sbjct: 91 VRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV--HQVSMGMKYLEES 146
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP--GYLDPQYHQ 437
HRD+ + N+LL +K++DFGLS+ + ++ G + P+
Sbjct: 147 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV+SFGV++ E +
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 266 EKQRLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
E + LG+G FGTV G Q + V I + + D +++ E ++ + +P +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 321 VRLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
VR++G C E +LV E G L ++LQ+ R I L + + + +L +
Sbjct: 91 VRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV--HQVSMGMKYLEES 146
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP--GYLDPQYHQ 437
HRD+ + N+LL +K++DFGLS+ + ++ G + P+
Sbjct: 147 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV+SFGV++ E +
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + LCQ +Q E + +S+ + + I HLH
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 142
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 143 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 197
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 198 GMGYKENVDIWSVGCIMGEMV 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + LCQ +Q E + +S+ + + I HLH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 198
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 259 KATIGFSEKQRLGTGAFGTV-----------YAGKLQNDLLVAIKRIKHRDTDGIQQVVN 307
K + + K+ LG GAF V +A K+ N K++ RD Q++
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-----TKKLSARD---FQKLER 77
Query: 308 EIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
E ++ + HPN+VRL E LV++ + G L + + + S
Sbjct: 78 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQ 135
Query: 368 ETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLS-RLGMTEISHISTA 423
+ ++IA+ HS I HR++K N+LL K K+ADFGL+ + +E H
Sbjct: 136 QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---G 189
Query: 424 PQGTPGYLDPQYHQNFHLSDKSDVYSFGVVL 454
GTPGYL P+ + S D+++ GV+L
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 11/201 (5%)
Query: 270 LGTGAFGTVYAGKLQN-DLLVAIKRIKHR---DTDGIQQVVNEIKLISCVS-HPNLVRLL 324
+G G++ V +L+ D + A++ +K D + I V E + S HP LV L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
C V E++ G L H+QR+R L + E + A+ +LH I
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHER---GI 174
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
+RD+K N+LLD K+ D+G+ + G+ ST GTP Y+ P+ +
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC-GTPNYIAPEILRGEDYGFS 233
Query: 445 SDVYSFGVVLVEIITALKVVD 465
D ++ GV++ E++ D
Sbjct: 234 VDWWALGVLMFEMMAGRSPFD 254
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + LCQ +Q E + +S+ + + I HLH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 144
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 199
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + LCQ +Q E + +S+ + + I HLH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 144
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 199
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + LCQ +Q E + +S+ + + I HLHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS 144
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMEPEVVTRYYRAPEVILG 199
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + LCQ +Q E + +S+ + + I HLHS
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS 146
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T + T Y P+
Sbjct: 147 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFV--VTRYYRAPEVILG 201
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E+I
Sbjct: 202 MGYKENVDIWSVGCIMGEMI 221
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 259 KATIGFSEKQRLGTGAFGTV-----------YAGKLQNDLLVAIKRIKHRDTDGIQQVVN 307
K + + K+ LG GAF V +A K+ N K++ RD Q++
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-----TKKLSARD---FQKLER 53
Query: 308 EIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
E ++ + HPN+VRL E LV++ + G L + + + S
Sbjct: 54 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQ 111
Query: 368 ETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLS-RLGMTEISHISTA 423
+ ++IA+ HS I HR++K N+LL K K+ADFGL+ + +E H
Sbjct: 112 QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---G 165
Query: 424 PQGTPGYLDPQYHQNFHLSDKSDVYSFGVVL 454
GTPGYL P+ + S D+++ GV+L
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 20/197 (10%)
Query: 268 QRLGTGAFGTV------YAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLV 321
+ LG GAF V AG+ ++ K++ RD Q++ E ++ + HPN+V
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDH---QKLEREARICRLLKHPNIV 84
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
RL E G L+++ + G L + + RE S + +A+ H H
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGELFEDIVAREY---YSEADASHCIQQILEAVLHCHQM- 140
Query: 381 NPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
+ HRD+K N+LL K K+ADFGL+ + + GTPGYL P+ +
Sbjct: 141 --GVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 438 NFHLSDKSDVYSFGVVL 454
D+++ GV+L
Sbjct: 198 KDPYGKPVDLWACGVIL 214
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + LCQ +Q E + +S+ + + I HLH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 137
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 138 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 192
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 193 GMGYKENVDIWSVGCIMGEMV 213
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 270 LGTGAFGTVYAGKL---QNDLLVAIKRIKHR-DTDGIQQVVNEIKLISCVSH-PNLVRLL 324
+G GA+G+V K+ + ++A+KRI+ D +Q++ ++ ++ S P +V+
Sbjct: 30 IGRGAYGSV--NKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 325 GCSIERGEQILVYEFMPNG--TLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINP 382
G G+ + E M +++ D + I + + T +A+ HL N
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE--NL 145
Query: 383 PIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTA---PQGTPGYLDPQY-HQN 438
I HRDIK SNILLD + K+ DFG+S + I+ A P P +DP Q
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 439 FHLSDKSDVYSFGVVLVEIITA 460
+ + +SDV+S G+ L E+ T
Sbjct: 206 YDV--RSDVWSLGITLYELATG 225
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 259 KATIGFSEKQRLGTGAFGTV-----------YAGKLQNDLLVAIKRIKHRDTDGIQQVVN 307
K + + K+ LG GAF V +A K+ N K++ RD Q++
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-----TKKLSARD---FQKLER 54
Query: 308 EIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
E ++ + HPN+VRL E LV++ + G L + + + S
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQ 112
Query: 368 ETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLS-RLGMTEISHISTA 423
+ ++IA+ HS I HR++K N+LL K K+ADFGL+ + +E H
Sbjct: 113 QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---G 166
Query: 424 PQGTPGYLDPQYHQNFHLSDKSDVYSFGVVL 454
GTPGYL P+ + S D+++ GV+L
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + LCQ +Q E + +S+ + + I HLH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 136
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 137 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 191
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + LCQ +Q E + +S+ + + I HLH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 181
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 182 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 236
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + LCQ +Q E + +S+ + + I HLH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 137
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 138 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 192
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 193 GMGYKENVDIWSVGCIMGEMV 213
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 259 KATIGFSEKQRLGTGAFGTV-----------YAGKLQNDLLVAIKRIKHRDTDGIQQVVN 307
K + + K+ LG GAF V +A K+ N K++ RD Q++
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-----TKKLSARD---FQKLER 54
Query: 308 EIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM 367
E ++ + HPN+VRL E LV++ + G L + + + S
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQ 112
Query: 368 ETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLS-RLGMTEISHISTA 423
+ ++IA+ HS I HR++K N+LL K K+ADFGL+ + +E H
Sbjct: 113 QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---G 166
Query: 424 PQGTPGYLDPQYHQNFHLSDKSDVYSFGVVL 454
GTPGYL P+ + S D+++ GV+L
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 266 EKQRLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
E + LG+G FGTV G Q + V I + + D +++ E ++ + +P +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 321 VRLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
VR++G C E +LV E G L ++LQ+ R I L + + + +L +
Sbjct: 433 VRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV--HQVSMGMKYLEES 488
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP--GYLDPQYHQ 437
HRD+ + N+LL +K++DFGLS+ + ++ G + P+
Sbjct: 489 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 545
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV+SFGV++ E +
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 266 EKQRLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
E + LG+G FGTV G Q + V I + + D +++ E ++ + +P +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 321 VRLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
VR++G C E +LV E G L ++LQ+ R I L + + + +L +
Sbjct: 434 VRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV--HQVSMGMKYLEES 489
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP--GYLDPQYHQ 437
HRD+ + N+LL +K++DFGLS+ + ++ G + P+
Sbjct: 490 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 546
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV+SFGV++ E +
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLL----VAIKRIK--HRDTDGIQQVVNEIKLISCVSHPNLVRL 323
+G G F V KL +L VA++ I ++ +Q++ E++++ ++HPN+V+L
Sbjct: 22 IGKGNFAKV---KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
LV E+ G + +L R + R V+ A+ + H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKF 133
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
I HRD+K+ N+LLD + K+ADFG S T + + T G+P Y P+ Q
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLDTFC-GSPPYAAPELFQGKK 188
Query: 441 LSD-KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
+ DV+S GV+L +++ S P + NL L +R+ +G+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKEL-RERVLRGK 229
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 11/201 (5%)
Query: 270 LGTGAFGTVYAGKLQN-DLLVAIKRIKHR---DTDGIQQVVNEIKLISCVS-HPNLVRLL 324
+G G++ V +L+ D + A+K +K D + I V E + S HP LV L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
C V E++ G L H+QR+R L + E + A+ +LH I
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHER---GI 142
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
+RD+K N+LLD K+ D+G+ + G+ ++ GTP Y+ P+ +
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSXFCGTPNYIAPEILRGEDYGFS 201
Query: 445 SDVYSFGVVLVEIITALKVVD 465
D ++ GV++ E++ D
Sbjct: 202 VDWWALGVLMFEMMAGRSPFD 222
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 269 RLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQ--VVNEIKLISCVSHPNLVRLLG 325
++G G++G V+ + ++ +VAIK+ + D + + + EI+++ + HPNLV LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAI--AHLHSAINPP 383
+ LV+E+ + L + + +RG + + ++ +T QA+ H H+ I
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRG--VPEHLVKSITWQTLQAVNFCHKHNCI--- 124
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYH-QNFHLS 442
HRD+K NIL+ + K+ DFG +RL +T S T Y P+ +
Sbjct: 125 --HRDVKPENILITKHSVIKLCDFGFARL-LTGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Query: 443 DKSDVYSFGVVLVEIITALKV 463
DV++ G V E+++ + +
Sbjct: 182 PPVDVWAIGCVFAELLSGVPL 202
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + LCQ +Q E + +S+ + + I HLHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-----LLYQMLCGIKHLHS 144
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMEPEVVTRYYRAPEVILG 199
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 200 MGYKENVDLWSVGCIMGEMV 219
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERG----------DGLSWPIRLTVAMETA 370
LLG C+ G +++ EF G L +L+ +R D L+ + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 371 QAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-G 429
+ + L S HRD+ + NILL K+ DFGL+R + ++ P
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
++ P+ + + +SDV+SFGV+L EI +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERG----------DGLSWPIRLTVAMETA 370
LLG C+ G +++ EF G L +L+ +R D L+ + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 371 QAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-G 429
+ + L S HRD+ + NILL K+ DFGL+R + ++ P
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
++ P+ + + +SDV+SFGV+L EI +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 266 EKQRLGTGAFGTVYAGKLQ-----NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
E + LG+G FGTV G Q + V I + + D +++ E ++ + +P +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 321 VRLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
VR++G C E +LV E G L ++LQ+ R I L + + + +L +
Sbjct: 75 VRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV--HQVSMGMKYLEES 130
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP--GYLDPQYHQ 437
HRD+ + N+LL +K++DFGLS+ + + G + P+
Sbjct: 131 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECIN 187
Query: 438 NFHLSDKSDVYSFGVVLVEIIT 459
+ S KSDV+SFGV++ E +
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 12/195 (6%)
Query: 270 LGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRLL 324
+G G FG V+ G + + VAIK K+ +D + ++ + E + HP++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
G E I++ E G L LQ R L + A + + A+A+L S
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK---RF 512
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSD 443
HRDI + N+L+ K+ DFGLSR M + ++ + P ++ P+ +
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 444 KSDVYSFGVVLVEII 458
SDV+ FGV + EI+
Sbjct: 572 ASDVWMFGVCMWEIL 586
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 32/240 (13%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS ++H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLSRLGMTEISHISTAPQG-----TPG 429
HRDI + N LL +VA DFG++R +I S +G
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 211
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
++ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 266
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 32/240 (13%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS ++H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLSRLGMTEISHISTAPQG-----TPG 429
HRDI + N LL +VA DFG++R +I S +G
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 225
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
++ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 280
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 95
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P L +L + +V E+ P G + HL+ R P A +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFXEPHARFYAAQIVL 153
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+++D KV DFG ++ + + GTP YL
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 34/241 (14%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIK--HRDTDGIQQVVNEIKLISCVSHPNLV 321
LG GAFG VY G+ + ND L VA+K + + + D + ++ E +IS +H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM-EALIISKFNHQNIV 111
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHL 376
R +G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 377 HSAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLSRLGMTEISHISTAPQG-----TP 428
HRDI + N LL +VA DFG++R +I S +G
Sbjct: 172 EENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 224
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
++ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRM 279
Query: 489 D 489
D
Sbjct: 280 D 280
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 95
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 153
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 154 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 206
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS +H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLSRLGMTEISHISTAPQG-----TPG 429
HRDI + N LL +VA DFG++R +I S +G
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 210
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
++ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 265
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 31/241 (12%)
Query: 258 EKATIG-FSEKQRLGTGAFGTVYAGKLQNDLL----VAIKRIKHRDTD--GIQQVVNEIK 310
E+ IG + ++ +G G F V KL +L VA+K I + +Q++ E++
Sbjct: 10 EQPHIGNYRLQKTIGKGNFAKV---KLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVR 66
Query: 311 LISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAM 367
++ ++HPN+V+L LV E+ G + +L R + R V+
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS- 125
Query: 368 ETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGT 427
A+ + H I HRD+K+ N+LLD + K+ADFG S T + + T G+
Sbjct: 126 ----AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSN-EFTVGNKLDTFC-GS 176
Query: 428 PGYLDPQYHQNFHLSD-KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
P Y P+ Q + DV+S GV+L +++ S P + NL L +R+ +G
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKEL-RERVLRG 229
Query: 487 R 487
+
Sbjct: 230 K 230
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLL----VAIKRIK--HRDTDGIQQVVNEIKLISCVSHPNLVRL 323
+G G F V KL +L VA+K I ++ +Q++ E+++ ++HPN+V+L
Sbjct: 22 IGKGNFAKV---KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKL 78
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
LV E+ G + +L R + R V+ A+ + H
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS-----AVQYCHQKF 133
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
I HRD+K+ N+LLD + K+ADFG S + A G P Y P+ Q
Sbjct: 134 ---IVHRDLKAENLLLDADXNIKIADFGFS--NEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 441 LSD-KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
+ DV+S GV+L +++ S P + NL L +R+ +G+
Sbjct: 189 YDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKEL-RERVLRGK 229
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS +H N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLSRLGMTEISHISTAPQG-----TPG 429
HRDI + N LL +VA DFG++R +I S +G
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 202
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
++ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 257
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 11/201 (5%)
Query: 270 LGTGAFGTVYAGKLQN-DLLVAIKRIKHR---DTDGIQQVVNEIKLISCVS-HPNLVRLL 324
+G G++ V +L+ D + A+K +K D + I V E + S HP LV L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
C V E++ G L H+QR+R L + E + A+ +LH I
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHER---GI 131
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
+RD+K N+LLD K+ D+G+ + G+ ++ GTP Y+ P+ +
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSXFCGTPNYIAPEILRGEDYGFS 190
Query: 445 SDVYSFGVVLVEIITALKVVD 465
D ++ GV++ E++ D
Sbjct: 191 VDWWALGVLMFEMMAGRSPFD 211
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 85/188 (45%), Gaps = 12/188 (6%)
Query: 270 LGTGAFGTVYAGKLQ-NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
LG+GAF V+ K + L A+K IK + NEI ++ + H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
LV + + G L + ERG L V + A+ +LH I HRD
Sbjct: 77 STTHYYLVMQLVSGGELFDRI-LERGVYTEKDASL-VIQQVLSAVKYLHEN---GIVHRD 131
Query: 389 IKSSNILL---DYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
+K N+L + N K + DFGLS++ E + I + GTPGY+ P+ S
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKPYSKAV 188
Query: 446 DVYSFGVV 453
D +S GV+
Sbjct: 189 DCWSIGVI 196
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS +H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLSRLGMTEISHISTAPQG-----TPG 429
HRDI + N LL +VA DFG++R +I S +G
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 210
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
++ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 265
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 11/201 (5%)
Query: 270 LGTGAFGTVYAGKLQN-DLLVAIKRIKHR---DTDGIQQVVNEIKLISCVS-HPNLVRLL 324
+G G++ V +L+ D + A+K +K D + I V E + S HP LV L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
C V E++ G L H+QR+R L + E + A+ +LH I
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLHER---GI 127
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK 444
+RD+K N+LLD K+ D+G+ + G+ ++ GTP Y+ P+ +
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSXFCGTPNYIAPEILRGEDYGFS 186
Query: 445 SDVYSFGVVLVEIITALKVVD 465
D ++ GV++ E++ D
Sbjct: 187 VDWWALGVLMFEMMAGRSPFD 207
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 264 FSEKQRLGTGAFGTVYAGK-LQNDLLVAIKRIKHRDTD-GI-QQVVNEIKLISCVSHPNL 320
+ + +++G G +GTV+ K + +VA+KR++ D D G+ + EI L+ + H N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
VRL + LV+EF + L ++ GD L I + + + + HS
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSR- 120
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
+ HRD+K N+L++ N + K+ADFGL+R + S A T Y P
Sbjct: 121 --NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS-AEVVTLWYRPPDVLFGAK 177
Query: 441 LSDKS-DVYSFGVVLVEIITALKVVDFSRPPNEVN 474
L S D++S G + E+ A + + P N+V+
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPL---FPGNDVD 209
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS +H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLSRLGMTEISHISTAPQG-----TPG 429
HRDI + N LL +VA DFG++R +I S +G
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 225
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
++ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 280
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 18/196 (9%)
Query: 269 RLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
++G G+ G V A + + VA+K + R + + NE+ ++ H N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ E ++ EF+ G L + + R L+ TV QA+A+LH+ + HR
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQALAYLHAQ---GVIHR 165
Query: 388 DIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ-----GTPGYLDPQYHQNFHLS 442
DIKS +ILL + + K++DFG +IS P+ GTP ++ P+ +
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFC----AQIS--KDVPKRKXLVGTPYWMAPEVISRSLYA 219
Query: 443 DKSDVYSFGVVLVEII 458
+ D++S G++++E++
Sbjct: 220 TEVDIWSLGIMVIEMV 235
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-A 185
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS +H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLSRLGMTEISHISTAPQG-----TPG 429
HRDI + N LL +VA DFG++R +I S +G
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 211
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
++ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 266
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS +H N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLSRLGMTEISHISTAPQG-----TPG 429
HRDI + N LL +VA DFG++R +I S +G
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 227
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
++ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 282
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 81
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 139
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 140 TFEYLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 192
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEM 218
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 127
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-A 186
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLL----VAIKRIKHRDTD--GIQQVVNEIKLISCVSHPNLVRL 323
+G G F V KL +L VAIK I + +Q++ E++++ ++HPN+V+L
Sbjct: 20 IGKGNFAKV---KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
L+ E+ G + +L R + R V+ A+ + H
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-----AVQYCHQK- 130
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
I HRD+K+ N+LLD + K+ADFG S T + T G+P Y P+ Q
Sbjct: 131 --RIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVGGKLDTFC-GSPPYAAPELFQGKK 186
Query: 441 LSD-KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
+ DV+S GV+L +++ S P + NL L +R+ +G+
Sbjct: 187 YDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKEL-RERVLRGK 227
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 270 LGTGAFGTVYAGKLQNDLL----VAIKRIKHRDTD--GIQQVVNEIKLISCVSHPNLVRL 323
+G G F V KL +L VAIK I + +Q++ E++++ ++HPN+V+L
Sbjct: 23 IGKGNFAKV---KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
L+ E+ G + +L R + R V+ A+ + H
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-----AVQYCHQK- 133
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
I HRD+K+ N+LLD + K+ADFG S + A G P Y P+ Q
Sbjct: 134 --RIVHRDLKAENLLLDADMNIKIADFGFS--NEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 441 LSD-KSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGR 487
+ DV+S GV+L +++ S P + NL L +R+ +G+
Sbjct: 190 YDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKEL-RERVLRGK 230
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS +H N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLSRLGMTEISHISTAPQG-----TPG 429
HRDI + N LL +VA DFG++R +I S +G
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 217
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
++ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 272
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 264 FSEKQRLGTGAFG-TVYAGKLQNDLLVAIKRIKHRDTDGIQQVV-NEIKLISCVSHPNLV 321
F K+ LGTGAF V A + L A+K I + G + + NEI ++ + H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
L LV + + G L + E+G + T+ + A+ +LH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIV-EKG-FYTEKDASTLIRQVLDAVYYLHRM-- 139
Query: 382 PPIYHRDIKSSNILL---DYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQYHQ 437
I HRD+K N+L D K ++DFGLS++ G ++ +STA GTPGY+ P+
Sbjct: 140 -GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV--MSTAC-GTPGYVAPEVLA 195
Query: 438 NFHLSDKSDVYSFGVV 453
S D +S GV+
Sbjct: 196 QKPYSKAVDCWSIGVI 211
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R + P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFAEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS +H N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLSRLGMTEISHISTAPQG-----TPG 429
HRDI + N LL +VA DFG++R +I S +G
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 237
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
++ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 292
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 107/239 (44%), Gaps = 30/239 (12%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS +H N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLS----RLGMTEISHISTAPQGTPGY 430
HRDI + N LL +VA DFG++ R G + P +
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV---KW 229
Query: 431 LDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
+ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 230 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 283
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P + + D ++ GV++ E+
Sbjct: 206 APAIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 28/217 (12%)
Query: 268 QRLGTGAFGTVYA----GKLQND--LLVAIKRIK-HRDTDGIQQVVNEIKLISCV-SHPN 319
+ LG GAFG V G +++D + VA+K +K + +++E+K++S + +H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGL---SWPIRL------------- 363
+V LLG G +++ E+ G L L+R+R + + P +
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTA 423
+ + + A+ +A L S HRD+ + NILL + +K+ DFGL+R + +++
Sbjct: 149 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 424 PQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ N + +SDV+S+G+ L E+ +
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 185
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ ++
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYQM 231
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 30/202 (14%)
Query: 268 QRLGTGAFGTV-----------YAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVS 316
+ LG GAF V YA K+ N K++ RD Q++ E ++ +
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIIN-----TKKLSARDH---QKLEREARICRLLK 88
Query: 317 HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVAMETAQAIAH 375
HPN+VRL E G LV++ + G L + + RE S + +++ H
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY---YSEADASHCIHQILESVNH 145
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLD 432
+H I HRD+K N+LL K K+ADFGL+ + + GTPGYL
Sbjct: 146 IHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLS 201
Query: 433 PQYHQNFHLSDKSDVYSFGVVL 454
P+ + D+++ GV+L
Sbjct: 202 PEVLRKDPYGKPVDIWACGVIL 223
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-A 185
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 107/239 (44%), Gaps = 30/239 (12%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS +H N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLS----RLGMTEISHISTAPQGTPGY 430
HRDI + N LL +VA DFG++ R G + P +
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV---KW 252
Query: 431 LDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
+ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 306
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + L Q +Q E + +S+ + + I HLH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLH 143
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 198
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+++D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLIIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIIISKGYNKAVDWWALGVLIYEM 231
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + L Q +Q E + +S+ + + I HLHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLCGIKHLHS 144
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E+I
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 28/217 (12%)
Query: 268 QRLGTGAFGTVYA----GKLQND--LLVAIKRIK-HRDTDGIQQVVNEIKLISCV-SHPN 319
+ LG GAFG V G +++D + VA+K +K + +++E+K++S + +H N
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGL---SWPIRL------------- 363
+V LLG G +++ E+ G L L+R+R + + P +
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTA 423
+ + + A+ +A L S HRD+ + NILL + +K+ DFGL+R + +++
Sbjct: 165 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 221
Query: 424 PQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ N + +SDV+S+G+ L E+ +
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-A 185
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 49/300 (16%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQND----LLVAIKRIKHR--DTDGIQQVVNEIKLISCVSH 317
F+ + LG G FG+V +L+ + + VA+K +K + I++ + E + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 318 PNLVRLLGCSIERGEQ------ILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTV--AM 367
P++ +L+G S+ + +++ FM +G L L R + + P++ V +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 368 ETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGT 427
+ A + +L S HRD+ + N +L + VADFGLSR +I QG
Sbjct: 145 DIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSR----KIYSGDYYRQGC 197
Query: 428 PGYLDPQYHQNFHLSDK-----SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADR 482
L ++ L+D SDV++FGV + EI+T + P + A +
Sbjct: 198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT-----PYAGIENAEIYNYL 252
Query: 483 ISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVATELEHI 542
I RL + P +E +V +L ++C + RPS T + ELE+I
Sbjct: 253 IGGNRLKQ--PPECME--------------EVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + L Q +Q E + +S+ + + I HLH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLH 136
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 137 SA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 191
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 28/217 (12%)
Query: 268 QRLGTGAFGTVYA----GKLQND--LLVAIKRIK-HRDTDGIQQVVNEIKLISCV-SHPN 319
+ LG GAFG V G +++D + VA+K +K + +++E+K++S + +H N
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGL---SWPIRL------------- 363
+V LLG G +++ E+ G L L+R+R + + P +
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTA 423
+ + + A+ +A L S HRD+ + NILL + +K+ DFGL+R + +++
Sbjct: 167 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 223
Query: 424 PQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ N + +SDV+S+G+ L E+ +
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 28/217 (12%)
Query: 268 QRLGTGAFGTVYA----GKLQND--LLVAIKRIK-HRDTDGIQQVVNEIKLISCV-SHPN 319
+ LG GAFG V G +++D + VA+K +K + +++E+K++S + +H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGL---SWPIRL------------- 363
+V LLG G +++ E+ G L L+R+R + + P +
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTA 423
+ + + A+ +A L S HRD+ + NILL + +K+ DFGL+R + +++
Sbjct: 172 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKG 228
Query: 424 PQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ N + +SDV+S+G+ L E+ +
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 115
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R P A +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVL 173
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 174 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 226
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTVA 366
LLG C+ G +++ EF G L +L+ +R + + + + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQG 426
+ A+ + L S HRD+ + NILL K+ DFGL+R + ++
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 427 TP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ + + +SDV+SFGV+L EI +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ CV+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + L Q +Q E + +S+ + + I HLHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLCGIKHLHS 144
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E+I
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 28/217 (12%)
Query: 268 QRLGTGAFGTVYA----GKLQND--LLVAIKRIK-HRDTDGIQQVVNEIKLISCV-SHPN 319
+ LG GAFG V G +++D + VA+K +K + +++E+K++S + +H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGL---SWPIRL------------- 363
+V LLG G +++ E+ G L L+R+R + + P +
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTA 423
+ + + A+ +A L S HRD+ + NILL + +K+ DFGL+R + +++
Sbjct: 172 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 228
Query: 424 PQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ N + +SDV+S+G+ L E+ +
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERG------------DGLSWPIRLTVAME 368
LLG C+ G +++ EF G L +L+ +R D L+ + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
A+ + L S HRD+ + NILL K+ DFGL+R + + P
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 429 -GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
++ P+ + + +SDV+SFGV+L EI +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + L Q +Q E + +S+ + + I HLHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHS 144
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S GV++ E+I
Sbjct: 200 MGYKENVDIWSVGVIMGEMI 219
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 43/228 (18%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
F E LG GAFG V + D AIK+I+H + + + +++E+ L++ ++H +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASLNHQYVVR 66
Query: 323 LLGCSIERGEQI-------------LVYEFMPNGTL-----CQHLQRERGDGLSWPIRLT 364
+ER + + E+ N TL ++L ++R + W
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE--YW----R 120
Query: 365 VAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAP 424
+ + +A++++HS I HR++K NI +D + K+ DFGL++ + +
Sbjct: 121 LFRQILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 425 QGTPGYLD--------------PQYHQNFHLSDKSDVYSFGVVLVEII 458
Q PG D H ++K D YS G++ E I
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTVA 366
LLG C+ G +++ EF G L +L+ +R + + + + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQG 426
+ A+ + L S HRD+ + NILL K+ DFGL+R + ++
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 427 TP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ + + +SDV+SFGV+L EI +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 89
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R P A +
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVL 147
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP YL
Sbjct: 148 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYL 200
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEM 226
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH-A 185
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + + ++H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 127
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 186
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + L Q +Q E + +S+ + + I HLHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHS 144
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S GV++ E+I
Sbjct: 200 MGYKENVDIWSVGVIMGEMI 219
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTVA 366
LLG C+ G +++ EF G L +L+ +R + + + + + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQG 426
+ A+ + L S HRD+ + NILL K+ DFGL+R + ++
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 427 TP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ + + +SDV+SFGV+L EI +
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTVA 366
LLG C+ G +++ EF G L +L+ +R + + + + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQG 426
+ A+ + L S HRD+ + NILL K+ DFGL+R + ++
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 427 TP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ + + +SDV+SFGV+L EI +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 185
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 32/240 (13%)
Query: 270 LGTGAFGTVYAGK---LQND---LLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVR 322
LG GAFG VY G+ + ND L VA+K + ++ + + E +IS +H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRER-----GDGLSWPIRLTVAMETAQAIAHLH 377
+G S++ + ++ E M G L L+ R L+ L VA + A +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVA---DFGLSRLGMTEISHISTAPQG-----TPG 429
HRDI + N LL +VA DFG+++ +I S +G
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ----DIYRASYYRKGGCAMLPVK 211
Query: 430 YLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
++ P+ + K+D +SFGV+L EI + L + + N+ L + S GR+D
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQEVLEFVT----SGGRMD 266
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 185
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 127
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 186
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 125
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 184
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 185 EPVDVWSCGIVLTAMLAG 202
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 40/246 (16%)
Query: 239 CLKEARGISNIPIYPYREIEKATIGFSEKQR-------LGTGAFG-----------TVYA 280
L++ + I N + Y +I K G K +G GAFG VYA
Sbjct: 46 ALRKNKNIDNF-LNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYA 104
Query: 281 GKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSIERGEQI-LVYEF 339
KL L + IK D+ + E +++ + P +V+L C+ + + + +V E+
Sbjct: 105 MKL----LSKFEMIKRSDSAFFWE---ERDIMAFANSPWVVQLF-CAFQDDKYLYMVMEY 156
Query: 340 MPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYN 399
MP G L +L W TA+ + L + + + HRD+K N+LLD +
Sbjct: 157 MPGGDLV-NLMSNYDVPEKW-----AKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKH 210
Query: 400 FKSKVADFGL-SRLGMTEISHISTAPQGTPGYLDPQYHQ----NFHLSDKSDVYSFGVVL 454
K+ADFG ++ T + H TA GTP Y+ P+ + + + + D +S GV L
Sbjct: 211 GHLKLADFGTCMKMDETGMVHCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 269
Query: 455 VEIITA 460
E++
Sbjct: 270 FEMLVG 275
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 127
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 186
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 127
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 186
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 127
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 186
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + LCQ +Q E + +S+ + + I HLH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 198
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERG--------------DGLSWPIRLTVA 366
LLG C+ G +++ EF G L +L+ +R D L+ + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQG 426
+ A+ + L S HRD+ + NILL K+ DFGL+R + ++
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 427 TP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ + + +SDV+SFGV+L EI +
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 264 FSEKQRLGTGAFGTVYAGK-LQNDLLVAIKRIKHRDTD-GI-QQVVNEIKLISCVSHPNL 320
+ + +++G G +GTV+ K + +VA+KR++ D D G+ + EI L+ + H N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
VRL + LV+EF + L ++ GD L I + + + + HS
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSR- 120
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
+ HRD+K N+L++ N + K+A+FGL+R + S A T Y P
Sbjct: 121 --NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS-AEVVTLWYRPPDVLFGAK 177
Query: 441 LSDKS-DVYSFGVVLVEIITA 460
L S D++S G + E+ A
Sbjct: 178 LYSTSIDMWSAGCIFAELANA 198
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 127
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 186
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 290 AIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL 349
A+K I R Q+ + +KL C HPN+V+L ++ LV E + G L + +
Sbjct: 40 AVKIISKRMEANTQKEITALKL--CEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERI 97
Query: 350 QRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILL---DYNFKSKVAD 406
++++ S + + A++H+H + HRD+K N+L + N + K+ D
Sbjct: 98 KKKK--HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIID 152
Query: 407 FGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
FG +RL + + T P T Y P+ + D++S GV+L +++
Sbjct: 153 FGFARLKPPDNQPLKT-PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 185
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 185
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 104
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
C + + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 105 CFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 159
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 160 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 219
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 220 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 257
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 185
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 185
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 30/202 (14%)
Query: 268 QRLGTGAFGTV-----------YAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVS 316
+ LG GAF V YA K+ N K++ RD Q++ E ++ +
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIIN-----TKKLSARDH---QKLEREARICRLLK 61
Query: 317 HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVAMETAQAIAH 375
HPN+VRL E G LV++ + G L + + RE S + +++ H
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY---YSEADASHCIQQILESVNH 118
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLD 432
H +N I HRD+K N+LL K K+ADFGL+ + + GTPGYL
Sbjct: 119 CH--LN-GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 433 PQYHQNFHLSDKSDVYSFGVVL 454
P+ + D+++ GV+L
Sbjct: 175 PEVLRKDPYGKPVDMWACGVIL 196
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA+G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 127
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 186
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLI-SCVSHPNL 320
I F K LG GA GT+ + ++ VA+KRI + E++L+ HPN+
Sbjct: 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRIL---PECFSFADREVQLLRESDEHPNV 80
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSW-PIRLTVAMETAQAIAHLHSA 379
+R +R Q + E + TL ++++++ L PI T+ +T +AHLHS
Sbjct: 81 IRYFCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPI--TLLQQTTSGLAHLHS- 136
Query: 380 INPPIYHRDIKSSNILLDY-----NFKSKVADFGLSR---LGMTEISHISTAPQGTPGYL 431
+N I HRD+K NIL+ K+ ++DFGL + +G S S P GT G++
Sbjct: 137 LN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP-GTEGWI 193
Query: 432 DPQYHQNFHLSDKS---DVYSFGVVLVEIIT 459
P+ + + D++S G V +I+
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTVA 366
LLG C+ G +++ EF G L +L+ +R + + + + + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQG 426
+ A+ + L S HRD+ + NILL K+ DFGL+R + +
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 427 TP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ + + +SDV+SFGV+L EI +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 103/197 (52%), Gaps = 12/197 (6%)
Query: 269 RLGTGAFGTVYAGK-LQNDLLVAIKRIKHR-DTDGIQQVVNEIKL-ISCVSHPNLVRLLG 325
LG GA+G V + + + + A+KRI+ ++ ++++ ++ + V P V G
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQR--ERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
G+ + E + + +L + ++ ++G + I +A+ +A+ HLHS ++
Sbjct: 101 ALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 157
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTA---PQGTPGYLDPQYHQNFH 440
+ HRD+K SN+L++ + K DFG+S + +++ A P P ++P+ +Q +
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 441 LSDKSDVYSFGVVLVEI 457
S KSD++S G+ +E+
Sbjct: 218 -SVKSDIWSLGITXIEL 233
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTVA 366
LLG C+ G +++ EF G L +L+ +R + + + + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQG 426
+ A+ + L S HRD+ + NILL K+ DFGL+R + +
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 427 TP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ + + +SDV+SFGV+L EI +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTVA 366
LLG C+ G +++ EF G L +L+ +R + + + + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQG 426
+ A+ + L S HRD+ + NILL K+ DFGL+R + +
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 427 TP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ + + +SDV+SFGV+L EI +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR--------------LTVA 366
LLG C+ G +++ EF G L +L+ +R + + + + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQG 426
+ A+ + L S HRD+ + NILL K+ DFGL+R + +
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 427 TP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ + + +SDV+SFGV+L EI +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 19/227 (8%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDG--IQQVVNEIKLISCVSHPNLVRLL 324
+ +GTG F V A + +VAIK I ++T G + ++ EI+ + + H ++ +L
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHICQLY 74
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+ +V E+ P G L ++ + D LS V + A+A++HS
Sbjct: 75 HVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQ---GY 129
Query: 385 YHRDIKSSNILLDYNFKSKVADFGL-SRLGMTEISHISTAPQGTPGYLDPQYHQ-NFHLS 442
HRD+K N+L D K K+ DFGL ++ + H+ T G+ Y P+ Q +L
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPELIQGKSYLG 188
Query: 443 DKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
++DV+S G++L ++ P ++ N+ AL +I +G+ D
Sbjct: 189 SEADVWSMGILLYVLMCGF------LPFDDDNVMALYK-KIMRGKYD 228
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 89/206 (43%), Gaps = 38/206 (18%)
Query: 268 QRLGTGAFGTV-----------YAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVS 316
+ LG GAF V YA K+ N K++ RD Q++ E ++ +
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIIN-----TKKLSARDH---QKLEREARICRLLK 61
Query: 317 HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVAMETAQAIAH 375
HPN+VRL E G LV++ + G L + + RE + + I
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----------YYSEADASHCIQQ 111
Query: 376 LHSAIN----PPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTP 428
+ ++N I HRD+K N+LL K K+ADFGL+ + + GTP
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTP 170
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVL 454
GYL P+ + D+++ GV+L
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 270 LGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDGIQQ-VVNEIK-LISCVSHPNLV 321
LG GAFG V K VA+K +K T + +++E+K LI H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 322 RLLG-CSIERGEQILVYEFMPNGTLCQHLQRERG-------------DGLSWPIRLTVAM 367
LLG C+ G +++ EF G L +L+ +R D L+ + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 368 ETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGT 427
+ A+ + L S HRD+ + NILL K+ DFGL+R + +
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 428 P-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
P ++ P+ + + +SDV+SFGV+L EI +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 264 FSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNL 320
+ + + +G+GA G V A + VA+K++ ++ ++ E+ L+ CV+H N+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 321 VRLLGC-----SIERGEQI-LVYEFMPNGTLCQ----HLQRERGDGLSWPIRLTVAMETA 370
+ LL ++E + + LV E M + LCQ L ER L + +
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSYLLY--------QML 134
Query: 371 QAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGY 430
I HLHSA I HRD+K SNI++ + K+ DFGL+R T + + T T Y
Sbjct: 135 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAST--NFMMTPYVVTRYY 189
Query: 431 LDPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ + D++S G ++ E++
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELV 217
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 264 FSEKQRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKL 311
F + LGTG+FG V YA K L +V +K+I+H +NE ++
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEH--------TLNEKRI 94
Query: 312 ISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQ 371
+ V+ P LV+L + +V E++ G + HL+R S P A +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVL 152
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LHS + +RD+K N+L+D +V DFG ++ + + GTP L
Sbjct: 153 TFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEAL 205
Query: 432 DPQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ + + D ++ GV++ E+
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 264 FSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNL 320
+ + + +G+GA G V A + VA+K++ ++ ++ E+ L+ CV+H N+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 321 VRLLGC-----SIERGEQI-LVYEFMPNGTLCQ----HLQRERGDGLSWPIRLTVAMETA 370
+ LL ++E + + LV E M + LCQ L ER L + +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSYLLY--------QML 136
Query: 371 QAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGY 430
I HLHSA I HRD+K SNI++ + K+ DFGL+R T + + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT--NFMMTPYVVTRYY 191
Query: 431 LDPQYHQNFHLSDKSDVYSFGVVLVEII 458
P+ + D++S G ++ E++
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 270 LGTGAFGTVYAG-----KLQNDLLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRL 323
LG G FG+V G K Q D VAIK +K + ++++ E +++ + +P +VRL
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQID--VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 324 LG-CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINP 382
+G C E +LV E G L + L +R + P+ VA Q +
Sbjct: 76 IGVCQAE--ALMLVMEMAGGGPLHKFLVGKREEI---PVS-NVAELLHQVSMGMKYLEEK 129
Query: 383 PIYHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQNFH 440
HRD+ + N+LL +K++DFGLS+ LG + + + + P + P+
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 441 LSDKSDVYSFGVVLVEIIT 459
S +SDV+S+GV + E ++
Sbjct: 190 FSSRSDVWSYGVTMWEALS 208
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 270 LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGIQQVVN------EIKLISCVS----HP 318
LG G FGTV+AG +L + L VAIK I G + + E+ L+ V HP
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 319 NLVRLLGC-SIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
++RLL + G +++ +P L ++ E+G P R A AI H H
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT-EKGPLGEGPSRCFFGQVVA-AIQHCH 156
Query: 378 SAINPPIYHRDIKSSNILLDYNFK-SKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY- 435
S + HRDIK NIL+D +K+ DFG L E T GT Y P++
Sbjct: 157 SRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE---PYTDFDGTRVYSPPEWI 210
Query: 436 --HQNFHLSDKSDVYSFGVVLVEII 458
HQ L + V+S G++L +++
Sbjct: 211 SRHQYHALP--ATVWSLGILLYDMV 233
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQI-LVYEFM----PNGTLCQHLQRE 352
++ E++L+ + H N++ LL S+E + LV M N CQ L +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 133 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 182 TADEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 131 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 180 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 10/197 (5%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 100 TFQDDEKLYFGLSYAKNGCLLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 154
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + + GT Y+ P+ S
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKS 214
Query: 445 SDVYSFGVVLVEIITAL 461
SD+++ G ++ +++ L
Sbjct: 215 SDLWALGCIIYQLVAGL 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 133 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 182 TADEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 133 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 182 TADEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 131 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 180 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + L Q +Q E + +S+ + + I HLHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLVGIKHLHS 144
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E+I
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
Q LG GA G V A + VA+K + R D + + EI + ++H N+V+ G
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
E Q L E+ G L + E G+ P + + +LH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI---GIT 126
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGYLDPQY--HQNFHLS 442
HRDIK N+LLD K++DFGL+ + + GT Y+ P+ + FH +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH-A 185
Query: 443 DKSDVYSFGVVLVEIITA 460
+ DV+S G+VL ++
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 17 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 76
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 136
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 137 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARH 185
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 186 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 278 VYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVY 337
V A +L + L ++ R+T ++QV HP+++ L+ LV+
Sbjct: 129 VTAERLSPEQLEEVREATRRETHILRQVAG---------HPHIITLIDSYESSSFMFLVF 179
Query: 338 EFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLD 397
+ M G L +L + LS ++ +A++ LH+ I HRD+K NILLD
Sbjct: 180 DLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLD 234
Query: 398 YNFKSKVADFGLSRLGMTEISHISTAPQ-----GTPGYLDPQY--------HQNFHLSDK 444
N + +++DFG S H+ + GTPGYL P+ H + +
Sbjct: 235 DNMQIRLSDFGFS-------CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGY--GKE 285
Query: 445 SDVYSFGVVLVEIITA 460
D+++ GV+L ++
Sbjct: 286 VDLWACGVILFTLLAG 301
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 10/197 (5%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 152
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + A GT Y+ P+
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKS 212
Query: 445 SDVYSFGVVLVEIITAL 461
SD+++ G ++ +++ L
Sbjct: 213 SDLWALGCIIYQLVAGL 229
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQI-LVYEFM----PNGTLCQHLQRE 352
++ E++L+ + H N++ LL S+E + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 270 LGTGAFGTVYAGKLQ-NDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPN-LVRLL 324
LG G+FG V + + D L A+K +K D ++ + E ++++ P L +L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
C V E++ G L H+Q+ P + A E A + L S I
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GI 463
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ-GTPGYLDPQYHQNFHLSD 443
+RD+K N++LD K+ADFG+ + + + ++T GTP Y+ P+
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEIIAYQPYGK 521
Query: 444 KSDVYSFGVVLVEIITA 460
D ++FGV+L E++
Sbjct: 522 SVDWWAFGVLLYEMLAG 538
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 4 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 63
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 64 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 123
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 124 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 172
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 173 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 270 LGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QVVNEIKLISCVS--HPNL 320
LG+G FG+VY+G ++ ++L VAIK + K R +D + +V E+ L+ VS +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RLL +L+ E M ERG L + + + +A+ H H
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH--- 131
Query: 381 NPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY--HQ 437
N + HRDIK NIL+D N + K+ DFG G + T GT Y P++ +
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYH 188
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+H + V+S G++L +++
Sbjct: 189 RYH-GRSAAVWSLGILLYDMV 208
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQI-LVYEFM----PNGTLCQHLQRE 352
++ E++L+ + H N++ LL S+E + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 77
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 138 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 187 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 128 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARH 176
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 177 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 77
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 138 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 187 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQI-LVYEFM----PNGTLCQHLQRE 352
++ E++L+ + H N++ LL S+E + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 133 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 182 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQI-LVYEFM----PNGTLCQHLQRE 352
++ E++L+ + H N++ LL S+E + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ R I
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIH 70
Query: 303 -QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQR 351
++ E++L+ + H N++ LL S+E + + + L CQ L
Sbjct: 71 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 130
Query: 352 ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 131 DHVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR 179
Query: 412 LGMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 180 HTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ R I
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIH 70
Query: 303 -QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQR 351
++ E++L+ + H N++ LL S+E + + + L CQ L
Sbjct: 71 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 130
Query: 352 ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 131 DHVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 179
Query: 412 LGMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 180 HTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 132 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 181 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 123 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 172 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 123 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 172 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L+ + VAIK++ ++ ++ E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 325 GC-----SIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLHS 378
S+E + + + + + L Q +Q E + +S+ + + I HLHS
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-----LLYQMLCGIKHLHS 144
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQN 438
A I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 145 A---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 199
Query: 439 FHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E+I
Sbjct: 200 MGYKENVDIWSVGCIMGEMI 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 122 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 171 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQI-LVYEFM----PNGTLCQHLQRE 352
++ E++L+ + H N++ LL S+E + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 128 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 177 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 85
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 146 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIITA 460
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 195 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 17 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 76
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 136
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 137 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 185
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 186 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 131 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 180 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ R I
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIH 69
Query: 303 -QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQR 351
++ E++L+ + H N++ LL S+E + + + L CQ L
Sbjct: 70 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 129
Query: 352 ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 130 DHVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 178
Query: 412 LGMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 179 HTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 5 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 64
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 65 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 124
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 125 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 173
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 174 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 25 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 84
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 144
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 145 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 193
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIITA 460
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 194 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 254 YREIEKATIG---FSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHRDTDGIQQ 304
++ +E +G F + + LG G FG V+A GKL + + + + G Q
Sbjct: 174 WKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYA--CKKLNKKRLKKRKGYQG 231
Query: 305 VVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQR--ERGDGLSWPIR 362
+ E K+++ V +V L + + LV M G + H+ E G P
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLS---RLGMTEISH 419
+ + + HLH I +RD+K N+LLD + +++D GL+ + G T+
Sbjct: 292 IFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 420 ISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
+ GTPG++ P+ D ++ GV L E+I A
Sbjct: 349 YA----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHA 77
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 138 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 187 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQI-LVYEFM----PNGTLCQHLQRE 352
++ E++L+ + H N++ LL S+E + LV M N CQ L +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 128 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 177 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 128 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 177 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPN-LVRLL 324
LG G+FG V A + + L AIK +K D ++ + E ++++ + P L +L
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
C V E++ G L H+Q+ P + A E + + LH I
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISIGLFFLHKR---GI 141
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ-GTPGYLDPQYHQNFHLSD 443
+RD+K N++LD K+ADFG+ + M + ++T GTP Y+ P+
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHM--MDGVTTREFCGTPDYIAPEIIAYQPYGK 199
Query: 444 KSDVYSFGVVLVEIITALKVVD 465
D +++GV+L E++ D
Sbjct: 200 SVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 29 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 88
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 148
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 149 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 197
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIITA 460
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 198 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 254 YREIEKATIG---FSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHRDTDGIQQ 304
++ +E +G F + + LG G FG V+A GKL + + + + G Q
Sbjct: 174 WKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYA--CKKLNKKRLKKRKGYQG 231
Query: 305 VVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQR--ERGDGLSWPIR 362
+ E K+++ V +V L + + LV M G + H+ E G P
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLS---RLGMTEISH 419
+ + + HLH I +RD+K N+LLD + +++D GL+ + G T+
Sbjct: 292 IFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 420 ISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
+ GTPG++ P+ D ++ GV L E+I A
Sbjct: 349 YA----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 254 YREIEKATIG---FSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHRDTDGIQQ 304
++ +E +G F + + LG G FG V+A GKL + + + + G Q
Sbjct: 174 WKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYA--CKKLNKKRLKKRKGYQG 231
Query: 305 VVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQR--ERGDGLSWPIR 362
+ E K+++ V +V L + + LV M G + H+ E G P
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLS---RLGMTEISH 419
+ + + HLH I +RD+K N+LLD + +++D GL+ + G T+
Sbjct: 292 IFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 420 ISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
+ GTPG++ P+ D ++ GV L E+I A
Sbjct: 349 YA----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 254 YREIEKATIG---FSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHRDTDGIQQ 304
++ +E +G F + + LG G FG V+A GKL + + + + G Q
Sbjct: 174 WKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYA--CKKLNKKRLKKRKGYQG 231
Query: 305 VVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQR--ERGDGLSWPIR 362
+ E K+++ V +V L + + LV M G + H+ E G P
Sbjct: 232 AMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLS---RLGMTEISH 419
+ + + HLH I +RD+K N+LLD + +++D GL+ + G T+
Sbjct: 292 IFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 420 ISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
+ GTPG++ P+ D ++ GV L E+I A
Sbjct: 349 YA----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + L Q +Q E + +S+ + + I HLH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLH 143
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 198
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 268 QRLGTGAFGTVY--AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
+ LGTGAFG V+ + + A + ++D + V EI+ +S + HP LV L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK-ETVRKEIQTMSVLRHPTLVNLHD 221
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ E +++YEFM G L + + E + +S + + + + H+H
Sbjct: 222 AFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENN---YV 277
Query: 386 HRDIKSSNILLDYNFKS--KVADFGLS-RLGMTEISHISTAPQGTPGYLDPQYHQNFHLS 442
H D+K NI+ + K+ DFGL+ L + ++T GT + P+ + +
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVG 334
Query: 443 DKSDVYSFGVVLVEIITAL 461
+D++S GV+ +++ L
Sbjct: 335 YYTDMWSVGVLSYILLSGL 353
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 260 ATIGFSEKQRLGTGAFGTVYAGK-LQNDLLVAIKRIKHRD-TDGIQ-QVVNEIKLI---S 313
AT + +G GA+GTVY + + VA+K ++ + +G+ V E+ L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 314 CVSHPNLVRLLG-CSIERGEQ----ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
HPN+VRL+ C+ R ++ LV+E + + L +L + GL + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ + LH+ I HRD+K NIL+ K+ADFGL+R+ +++ T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVV--VTL 175
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
Y P+ + D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 30/202 (14%)
Query: 268 QRLGTGAFGTV-----------YAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVS 316
+ +G GAF V YA K+ N K++ RD Q++ E ++ +
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIIN-----TKKLSARDH---QKLEREARICRLLK 61
Query: 317 HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVAMETAQAIAH 375
H N+VRL E G LV++ + G L + + RE S + +A+ H
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY---YSEADASHCIQQILEAVLH 118
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLD 432
H + HRD+K N+LL K K+ADFGL+ + + GTPGYL
Sbjct: 119 CHQM---GVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 433 PQYHQNFHLSDKSDVYSFGVVL 454
P+ + D+++ GV+L
Sbjct: 175 PEVLRKEAYGKPVDIWACGVIL 196
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 270 LGTGAFGTVYAGKLQ-NDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPN-LVRLL 324
LG G+FG V + + D L A+K +K D ++ + E ++++ P L +L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 325 GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
C V E++ G L H+Q+ P + A E A + L S I
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GI 142
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ-GTPGYLDPQYHQNFHLSD 443
+RD+K N++LD K+ADFG+ + + + ++T GTP Y+ P+
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEIIAYQPYGK 200
Query: 444 KSDVYSFGVVLVEIITA 460
D ++FGV+L E++
Sbjct: 201 SVDWWAFGVLLYEMLAG 217
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 270 LGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQ--VVNEIKLISCVSHPNLVRLLGC 326
+G G++G V + ++ +VAIK+ D D + + + EIKL+ + H NLV LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 327 SIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYH 386
++ LV+EF+ + T+ L+ +GL + + + I HS I H
Sbjct: 93 CKKKKRWYLVFEFV-DHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIH 147
Query: 387 RDIKSSNILLDYNFKSKVADFGLSR 411
RDIK NIL+ + K+ DFG +R
Sbjct: 148 RDIKPENILVSQSGVVKLCDFGFAR 172
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 270 LGTGAFGTVYAGK-LQND-LLVAIKRIK-HRDTDGIQ----QVVNEIKLISCVSHPNLVR 322
+G GA+G V+ + L+N VA+KR++ +G+ + V ++ + HPN+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 323 LLG-CSIERGEQ----ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
L C++ R ++ LV+E + + L +L + G+ + + + + LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
S + HRD+K NIL+ + + K+ADFGL+R+ +++ S T Y P+
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV--VTLWYRAPEVLL 192
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G + E+
Sbjct: 193 QSSYATPVDLWSVGCIFAEMF 213
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQI-LVYEFM----PNGTLCQHLQRE 352
++ E++L+ + H N++ LL S+E + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQN-FHLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 270 LGTGAFGTVYAGK----LQNDLLVAIKRIKH----RDTDGIQQVVNEIKLISCVSHPNLV 321
LG G +G V+ + + A+K +K R+ E ++ V HP +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
L+ G+ L+ E++ G L L+RE G + +A E + A+ HLH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLERE-GIFMEDTACFYLA-EISMALGHLHQK-- 140
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLDPQYHQN 438
I +RD+K NI+L++ K+ DFGL + E H T GT Y+ P+
Sbjct: 141 -GIIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHTFCGTIEYMAPEILMR 195
Query: 439 FHLSDKSDVYSFGVVLVEIITA 460
+ D +S G ++ +++T
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 270 LGTGAFGTVYAGK----LQNDLLVAIKRIKH----RDTDGIQQVVNEIKLISCVSHPNLV 321
LG G +G V+ + + A+K +K R+ E ++ V HP +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 322 RLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
L+ G+ L+ E++ G L L+RE G + +A E + A+ HLH
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLERE-GIFMEDTACFYLA-EISMALGHLHQK-- 140
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLDPQYHQN 438
I +RD+K NI+L++ K+ DFGL + E H T GT Y+ P+
Sbjct: 141 -GIIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGTVTHXFCGTIEYMAPEILMR 195
Query: 439 FHLSDKSDVYSFGVVLVEIITA 460
+ D +S G ++ +++T
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTG 217
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 269 RLGTGAFGTVYAGKLQ-NDLLVAIKRIKHRDTDGIQ-QVVNEIKLISCVSHPNLVRLLGC 326
+LG G + TVY GK + D LVA+K I+ +G + E+ L+ + H N+V L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 327 SIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYH 386
LV+E++ + L Q+L + G+ ++ + + +A+ H + H
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLD-DCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLH 123
Query: 387 RDIKSSNILLDYNFKSKVADFGLSR 411
RD+K N+L++ + K+ADFGL+R
Sbjct: 124 RDLKPQNLLINERGELKLADFGLAR 148
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 10/197 (5%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 155
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + + GT Y+ P+
Sbjct: 156 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS 215
Query: 445 SDVYSFGVVLVEIITAL 461
SD+++ G ++ +++ L
Sbjct: 216 SDLWALGCIIYQLVAGL 232
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 260 ATIGFSEKQRLGTGAFGTVYAGK-LQNDLLVAIKRIKHRD-TDGIQ-QVVNEIKLI---S 313
AT + +G GA+GTVY + + VA+K ++ + +G+ V E+ L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 314 CVSHPNLVRLLG-CSIERGEQ----ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
HPN+VRL+ C+ R ++ LV+E + + L +L + GL + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ + LH+ I HRD+K NIL+ K+ADFGL+R+ +++ T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVV--VTL 175
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
Y P+ + D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 270 LGTGAFGTVYAGK-LQND-LLVAIKRIK-HRDTDGIQ----QVVNEIKLISCVSHPNLVR 322
+G GA+G V+ + L+N VA+KR++ +G+ + V ++ + HPN+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 323 LLG-CSIERGEQ----ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
L C++ R ++ LV+E + + L +L + G+ + + + + LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
S + HRD+K NIL+ + + K+ADFGL+R+ +++ S T Y P+
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLL 192
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G + E+
Sbjct: 193 QSSYATPVDLWSVGCIFAEMF 213
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 268 QRLGTGAFGTVY--AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
+ LG+GAFG V+ K + VA K I V NEI +++ + HP L+ L
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVA-KFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD 115
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
++ E +L+ EF+ G L + E +S + + + + H+H I
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMHEH---SIV 171
Query: 386 HRDIKSSNILLDYNFKS--KVADFGL-SRLGMTEISHISTAPQGTPGYLDPQYHQNFHLS 442
H DIK NI+ + S K+ DFGL ++L EI ++TA T + P+ +
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA---TAEFAAPEIVDREPVG 228
Query: 443 DKSDVYSFGVVLVEIITAL 461
+D+++ GV+ +++ L
Sbjct: 229 FYTDMWAIGVLGYVLLSGL 247
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 268 QRLGTGAFGTVY--AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
+ LGTGAFG V+ + + A + ++D + V EI+ +S + HP LV L
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK-ETVRKEIQTMSVLRHPTLVNLHD 115
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ E +++YEFM G L + + E + +S + + + + H+H
Sbjct: 116 AFEDDNEMVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENN---YV 171
Query: 386 HRDIKSSNILLDYNFKS--KVADFGLS-RLGMTEISHISTAPQGTPGYLDPQYHQNFHLS 442
H D+K NI+ + K+ DFGL+ L + ++T GT + P+ + +
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVG 228
Query: 443 DKSDVYSFGVVLVEIITAL 461
+D++S GV+ +++ L
Sbjct: 229 YYTDMWSVGVLSYILLSGL 247
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 154
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKS 214
Query: 445 SDVYSFGVVLVEIITAL 461
SD+++ G ++ +++ L
Sbjct: 215 SDLWALGCIIYQLVAGL 231
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 25/200 (12%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRL 323
F + LG GA VY K + ++ + D + V EI ++ +SHPN+++L
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK-KIVRTEIGVLLRLSHPNIIKL 113
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHL-------QRERGDGLSWPIRLTVAMETAQAIAHL 376
E LV E + G L + +R+ D + + +A+A+L
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK---------QILEAVAYL 164
Query: 377 HSAINPPIYHRDIKSSNILLDY---NFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDP 433
H I HRD+K N+L + K+ADFGLS++ E + GTPGY P
Sbjct: 165 HEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI--VEHQVLMKTVCGTPGYCAP 219
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ + + D++S G++
Sbjct: 220 EILRGCAYGPEVDMWSVGII 239
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
+G G+FG V K + A+K + + + + ++ V E++++ + HP LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + +V + + G L HLQ+ TV + + + L N I
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE-----TVKLFICELVMALDYLQNQRII 137
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
HRD+K NILLD + + DF ++ + E + A GT Y+ P+ S K
Sbjct: 138 HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA--GTKPYMAPEMFS----SRKG 191
Query: 446 DVYSFGVVLVEI-ITALKVVDFSRP 469
YSF V + +TA +++ RP
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 270 LGTGAFGTVYAGK-LQND-LLVAIKRIK-HRDTDGIQ----QVVNEIKLISCVSHPNLVR 322
+G GA+G V+ + L+N VA+KR++ +G+ + V ++ + HPN+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 323 LLG-CSIERGEQ----ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLH 377
L C++ R ++ LV+E + + L +L + G+ + + + + LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
S + HRD+K NIL+ + + K+ADFGL+R+ +++ S T Y P+
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLL 192
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G + E+
Sbjct: 193 QSSYATPVDLWSVGCIFAEMF 213
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 33/205 (16%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLVRLL 324
+G+GA+G+V Y +L+ VA+K++ I ++ E++L+ + H N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 325 -----GCSIERGEQILVYEFMPNGTL-----CQHLQRERGDGLSWPIRLTVAMETAQAIA 374
SIE ++ + + L CQ L E L + + + +
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY--------QLLRGLK 137
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQ 434
++HSA I HRD+K SN+ ++ + + ++ DFGL+R E+ T T Y P+
Sbjct: 138 YIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEM----TGYVATRWYRAPE 190
Query: 435 YHQNF-HLSDKSDVYSFGVVLVEII 458
N+ H + D++S G ++ E++
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELL 215
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 151
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + + GT Y+ P+
Sbjct: 152 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKS 211
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 212 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 249
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 154
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 445 SDVYSFGVVLVEIITAL 461
SD+++ G ++ +++ L
Sbjct: 215 SDLWALGCIIYQLVAGL 231
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQI-LVYEFM----PNGTLCQHLQRE 352
++ E++L+ + H N++ LL S+E + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ D+GL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGT-VYAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F T V A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 152
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 212
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 213 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 250
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 33/205 (16%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLVRLL 324
+G+GA+G+V Y +L+ VA+K++ I ++ E++L+ + H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 325 -----GCSIERGEQILVYEFMPNGTL-----CQHLQRERGDGLSWPIRLTVAMETAQAIA 374
SIE ++ + + L CQ L E L + + + +
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY--------QLLRGLK 145
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQ 434
++HSA I HRD+K SN+ ++ + + ++ DFGL+R E+ T T Y P+
Sbjct: 146 YIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM----TGYVATRWYRAPE 198
Query: 435 YHQNF-HLSDKSDVYSFGVVLVEII 458
N+ H + D++S G ++ E++
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 74
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 75 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 129
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 130 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 189
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 190 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 227
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 152
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 212
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 213 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 250
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 154
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 215 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 252
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 155
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 156 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 215
Query: 445 SDVYSFGVVLVEIITAL 461
SD+++ G ++ +++ L
Sbjct: 216 SDLWALGCIIYQLVAGL 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 154
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 215 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 252
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 152
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 153 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 212
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 213 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 250
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 75
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 76 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 130
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 131 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 190
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 191 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 76
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 77 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 131
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 132 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 191
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 192 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 229
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 82 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 136
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 137 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 196
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 197 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 154
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 155 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 214
Query: 445 SDVYSFGVVLVEIITAL 461
SD+++ G ++ +++ L
Sbjct: 215 SDLWALGCIIYQLVAGL 231
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHPNLVRLLG 325
+++G G +G VY + A+K+I+ ++ +GI + EI ++ + H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ +LV+E + + L + L G GL + ++ IA+ H + +
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCH---DRRVL 122
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSR 411
HRD+K N+L++ + K+ADFGL+R
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHPNLVRLLG 325
+++G G +G VY + A+K+I+ ++ +GI + EI ++ + H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ +LV+E + + L + L G GL + ++ IA+ H + +
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCH---DRRVL 122
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSR 411
HRD+K N+L++ + K+ADFGL+R
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 77
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 78 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 132
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 133 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 192
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 193 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 230
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 109/229 (47%), Gaps = 35/229 (15%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V + +++ L +A+K++ R I
Sbjct: 35 PTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS-RPFQSIIH 93
Query: 303 -QQVVNEIKLISCVSHPNLVRLL-----GCSIERGEQILVYEFMPNGTL-----CQHLQR 351
++ E++L+ + H N++ LL S+E + + + L CQ L
Sbjct: 94 AKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 153
Query: 352 ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 154 DHVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 202
Query: 412 LGMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 203 HTDDEM----TGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 25/201 (12%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKH--RDTDGIQQVVNEIKLISCVSHPNLVRLL 324
+G+GA G V Y L + VAIK++ ++ ++ E+ L+ V+H N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 325 GC-----SIERGEQI-LVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETAQAIAHLH 377
++E + + LV E M + L Q +Q E + +S+ + + I HLH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLCGIKHLH 143
Query: 378 SAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQ 437
SA I HRD+K SNI++ + K+ DFGL+R T S + T T Y P+
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVIL 198
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+ D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQND-LLVAIKRIKHR-DTDGIQQVVNEIKLISCVSHPNLV 321
+ K+RLGTG FG V Q+ VAIK+ + ++ EI+++ ++HPN+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 322 RLLGCSIERGEQ--------ILVYEFMPNGTLCQHL-QRERGDGL-SWPIRLTVAMETAQ 371
+ G Q +L E+ G L ++L Q E GL PIR T+ + +
Sbjct: 77 S--AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISS 133
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLD---YNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
A+ +LH I HRD+K NI+L K+ D G ++ + + T GT
Sbjct: 134 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTL 188
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALK 462
YL P+ + + D +SFG + E IT +
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQND-LLVAIKRIKHR-DTDGIQQVVNEIKLISCVSHPNLV 321
+ K+RLGTG FG V Q+ VAIK+ + ++ EI+++ ++HPN+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 322 RLLGCSIERGEQ--------ILVYEFMPNGTLCQHL-QRERGDGL-SWPIRLTVAMETAQ 371
+ G Q +L E+ G L ++L Q E GL PIR T+ + +
Sbjct: 76 S--AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISS 132
Query: 372 AIAHLHSAINPPIYHRDIKSSNILLD---YNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
A+ +LH I HRD+K NI+L K+ D G ++ + + T GT
Sbjct: 133 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTL 187
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALK 462
YL P+ + + D +SFG + E IT +
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 102
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 103 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 157
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 158 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 217
Query: 445 SDVYSFGVVLVEIITAL 461
SD+++ G ++ +++ L
Sbjct: 218 SDLWALGCIIYQLVAGL 234
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 260 ATIGFSEKQRLGTGAFGTVYAGK-LQNDLLVAIKRIKHRD-TDGIQ-QVVNEIKLI---S 313
AT + +G GA+GTVY + + VA+K ++ + +G+ V E+ L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 314 CVSHPNLVRLLG-CSIERGEQ----ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
HPN+VRL+ C+ R ++ LV+E + + L +L + GL + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP 428
+ + LH+ I HRD+K NIL+ K+ADFGL+R+ +++ T
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVV--VTL 175
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
Y P+ + D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLVAIKRIK-HRDTDGI-QQVVNEIKLISCVSHPNLVRLLG 325
+++G G +G VY + A+K+I+ ++ +GI + EI ++ + H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ +LV+E + + L + L G GL + ++ IA+ H + +
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCH---DRRVL 122
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSR 411
HRD+K N+L++ + K+ADFGL+R
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 13/197 (6%)
Query: 270 LGTGAFGTVYAGKL---QNDLLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G FG+V G + + VAIK +K + ++++ E +++ + +P +VRL+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 326 -CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
C E +LV E G L + L +R + P+ VA Q +
Sbjct: 404 VCQAE--ALMLVMEMAGGGPLHKFLVGKREE---IPVS-NVAELLHQVSMGMKYLEEKNF 457
Query: 385 YHRDIKSSNILLDYNFKSKVADFGLSR-LGMTEISHISTAPQGTP-GYLDPQYHQNFHLS 442
HR++ + N+LL +K++DFGLS+ LG + + + + P + P+ S
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 443 DKSDVYSFGVVLVEIIT 459
+SDV+S+GV + E ++
Sbjct: 518 SRSDVWSYGVTMWEALS 534
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 257 IEKATIGFSEKQR----LGTGAFGTVYAGK-----LQNDLLVAIKRIKHRDTDGIQQVVN 307
++ +T FS++ + LG G+FG V K + + V KR + TD + ++
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK-ESLLR 98
Query: 308 EIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVA 366
E++L+ + HPN+++L ++G LV E G L + R+R S +
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARII 155
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTA 423
+ I ++H I HRD+K N+LL+ K ++ DFGLS E S
Sbjct: 156 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKD 210
Query: 424 PQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
GT Y+ P+ + +K DV+S GV+L +++
Sbjct: 211 KIGTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSG 246
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR---DTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G+F TV A +L AIK ++ R + + V E ++S + HP V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+ + + NG L +++ R+ G R A E A+ +LH I
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVSALEYLHGK---GII 151
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K NILL+ + ++ DFG +++ E + GT Y+ P+
Sbjct: 152 HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKS 211
Query: 445 SDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRLD 489
SD+++ G ++ +++ L PP L +I K D
Sbjct: 212 SDLWALGCIIYQLVAGL-------PPFRAGNEYLIFQKIIKLEYD 249
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 257 IEKATIGFSEKQR----LGTGAFGTVYAGK-----LQNDLLVAIKRIKHRDTDGIQQVVN 307
++ +T FS++ + LG G+FG V K + + V KR + TD + ++
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK-ESLLR 99
Query: 308 EIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVA 366
E++L+ + HPN+++L ++G LV E G L + R+R S +
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARII 156
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTA 423
+ I ++H I HRD+K N+LL+ K ++ DFGLS E S
Sbjct: 157 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKD 211
Query: 424 PQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
GT Y+ P+ + +K DV+S GV+L +++
Sbjct: 212 KIGTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSG 247
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 29/226 (12%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ R I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIH 64
Query: 303 -QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTLCQHLQRER--G 354
++ E++L+ + H N++ LL S+E + + + L ++ ++
Sbjct: 65 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD 124
Query: 355 DGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGM 414
D + + I + + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 125 DHVQFLI-----YQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTD 176
Query: 415 TEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 177 DEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 33/214 (15%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
+ +++ + +G G+FG VY KL + LVAIK++ G E++++ + H N+
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNI 75
Query: 321 VRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVAMETAQA 372
VRL S E+ +++ LV +++P + +H R + ++L + + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 134
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST----AP 424
+A++HS I HRDIK N+LLD + K+ DFG ++ G +S+I + AP
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 425 QGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
+ G D + DV+S G VL E++
Sbjct: 192 ELIFGATD--------YTSSIDVWSAGCVLAELL 217
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRIKH---RDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G V+ A L++ VA+K ++ RD + E + + ++HP +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY- 78
Query: 326 CSIERGEQ--------ILVYEFMPNGTLCQHLQRERGDGLSWPIR-LTVAMETAQAIAHL 376
+ GE +V E++ TL + E G P R + V + QA+
Sbjct: 79 ---DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFS 132
Query: 377 HSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI--STAPQGTPGYLDPQ 434
H I HRD+K +NIL+ KV DFG++R + + + A GT YL P+
Sbjct: 133 HQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 435 YHQNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDVYS G VL E++T
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLT 214
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 322 RL----LGCSIERGEQILVYEFMPNGTL-----CQHLQRERGDGLSWPIRLTVAMETAQA 372
+ +IE+ + + + + + L CQHL D + + + +
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLS---NDHICY-----FLYQILRG 140
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGY 430
+ ++HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 431 LDPQYHQNFHLSDKS-DVYSFGVVLVEIIT 459
P+ N KS D++S G +L E+++
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 29 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 88
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 148
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 149 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 197
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T Y P+ N+ H + D++S G ++ E++T
Sbjct: 198 TDDEMX----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 110/251 (43%), Gaps = 48/251 (19%)
Query: 270 LGTGAFGTVY---------AGKL-------QNDLLVAIKRIKHRDTDGIQQVVNEIKLIS 313
LGTGA+G V+ GKL + ++ K +H T+ +QV+ I+
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTE--RQVLEHIR--- 116
Query: 314 CVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVAMETAQA 372
P LV L + L+ +++ G L HL QRER +++ V E A
Sbjct: 117 --QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT--EHEVQIYVG-EIVLA 171
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLD 432
+ HLH I +RDIK NILLD N + DFGLS+ + + + + GT Y+
Sbjct: 172 LEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA 228
Query: 433 PQYHQNFHLS-DKS-DVYSFGVVLVEIITALK--VVD--------------FSRPPNEVN 474
P + DK+ D +S GV++ E++T VD S PP
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE 288
Query: 475 LAALAADRISK 485
++ALA D I +
Sbjct: 289 MSALAKDLIQR 299
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 257 IEKATIGFSEKQR----LGTGAFGTVYAGK-----LQNDLLVAIKRIKHRDTDGIQQVVN 307
++ +T FS++ + LG G+FG V K + + V KR + TD + ++
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK-ESLLR 75
Query: 308 EIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVA 366
E++L+ + HPN+++L ++G LV E G L + R+R S +
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARII 132
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTA 423
+ I ++H I HRD+K N+LL+ K ++ DFGLS E S
Sbjct: 133 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKD 187
Query: 424 PQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
GT Y+ P+ + +K DV+S GV+L +++
Sbjct: 188 KIGTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSG 223
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 28 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 146
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 147 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 200
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 237
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 257 IEKATIGFSEKQR----LGTGAFGTVYAGK-----LQNDLLVAIKRIKHRDTDGIQQVVN 307
++ +T FS++ + LG G+FG V K + + V KR + TD + ++
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK-ESLLR 81
Query: 308 EIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVA 366
E++L+ + HPN+++L ++G LV E G L + R+R S +
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARII 138
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTA 423
+ I ++H I HRD+K N+LL+ K ++ DFGLS E S
Sbjct: 139 RQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKD 193
Query: 424 PQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
GT Y+ P+ + +K DV+S GV+L +++
Sbjct: 194 KIGTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSG 229
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 33/214 (15%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
+ +++ + +G G+FG VY KL + LVAIK++ G E++++ + H N+
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNI 75
Query: 321 VRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVAMETAQA 372
VRL S E+ +++ LV +++P + +H R + ++L + + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 134
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST----AP 424
+A++HS I HRDIK N+LLD + K+ DFG ++ G +S+I + AP
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 425 QGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
+ G D + DV+S G VL E++
Sbjct: 192 ELIFGATD--------YTSSIDVWSAGCVLAELL 217
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 28 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 146
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 147 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 200
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 237
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 27 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 145
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 146 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 199
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 236
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 27 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 145
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 146 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 199
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 236
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 14 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 132
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 133 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 186
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 187 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 223
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 28 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 146
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 147 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 200
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 237
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 27 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 145
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 146 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 199
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 236
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 27 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 145
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 146 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 199
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 236
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 48 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 97
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 98 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 156
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S+I +
Sbjct: 157 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 213
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 214 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 245
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 28 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 146
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 147 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 200
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 237
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 14 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 132
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 133 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 186
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 187 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 223
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 15 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 133
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 134 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 187
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 224
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 42 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 160
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 161 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 214
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 251
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 47 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 106
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 107 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 165
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 166 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 219
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 220 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 256
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 15 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 133
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 134 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 187
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 224
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 56 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 105
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 106 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 164
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S+I +
Sbjct: 165 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 221
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 222 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 253
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 103
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 162
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S+I +
Sbjct: 163 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 219
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 220 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 251
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 42 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 160
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 161 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 214
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 251
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 34 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 93
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 94 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 152
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 153 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 206
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 207 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 243
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QV 305
P +E E + LG+G FG+VY+G ++ ++L VAIK + K R +D + +V
Sbjct: 15 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 306 VNEIKLISCVS--HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRL 363
E+ L+ VS ++RLL +L+ E ERG L +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELAR 133
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHIST 422
+ + +A+ H H N + HRDIK NIL+D N + K+ DFG G + T
Sbjct: 134 SFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYT 187
Query: 423 APQGTPGYLDPQY--HQNFHLSDKSDVYSFGVVLVEII 458
GT Y P++ + +H + V+S G++L +++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYH-GRSAAVWSLGILLYDMV 224
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 58 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 107
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 108 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 166
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S+I +
Sbjct: 167 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 223
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 224 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 255
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 108/225 (48%), Gaps = 27/225 (12%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTLCQHLQRER--GD 355
++ E++L+ + H N++ LL S+E + + + L ++ ++ D
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDD 125
Query: 356 GLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
+ + I + + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLI-----YQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 416 EISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 178 EM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 255 REIEKATIGFSEKQRLGTGAFGTVYAGKL------QNDLLVAIKRIKHRDTDGI-QQVVN 307
+EI + + F E+ LG FG VY G L + VAIK +K + + ++ +
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 308 EIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL--------------QRER 353
E L + + HPN+V LLG + +++ + +G L + L R
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 354 GDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLG 413
L P + + + A + +L S + H+D+ + N+L+ K++D GL R
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 414 MTEISHISTAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P ++ P+ S SD++S+GVVL E+ +
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 25 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 74
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 75 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 133
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S+I +
Sbjct: 134 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 190
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 191 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 222
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
Query: 255 REIEKATIGFSEKQRLGTGAFGTVYAGKL------QNDLLVAIKRIKHRDTDGI-QQVVN 307
+EI + + F E+ LG FG VY G L + VAIK +K + + ++ +
Sbjct: 21 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 78
Query: 308 EIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL--------------QRER 353
E L + + HPN+V LLG + +++ + +G L + L R
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 354 GDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLG 413
L P + + + A + +L S + H+D+ + N+L+ K++D GL R
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 414 MTEISHISTAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
+ P ++ P+ S SD++S+GVVL E+ +
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIK-LISCVSHPNLVRLLGCS 327
LG GA+ V A LQN A+K I+ + +V E++ L C + N++ L+
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 328 IERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHR 387
+ LV+E + G++ H+Q+++ R V + A A+ LH+ I HR
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR--VVRDVAAALDFLHTK---GIAHR 135
Query: 388 DIKSSNILLDYNFK---SKVADFGLSRLGM------TEISHIS-TAPQGTPGYLDPQYHQ 437
D+K NIL + K K+ DF L GM T I+ T P G+ Y+ P+ +
Sbjct: 136 DLKPENILCESPEKVSPVKICDFDLGS-GMKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 438 NF-----HLSDKSDVYSFGVVLVEIITA 460
F + D++S GVVL +++
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 270 LGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QVVNEIKLISCVS--HPNL 320
LG+G FG+VY+G ++ ++L VAIK + K R +D + +V E+ L+ VS +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RLL +L+ E ERG L + + + +A+ H H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH--- 127
Query: 381 NPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY--HQ 437
N + HRDIK NIL+D N + K+ DFG G + T GT Y P++ +
Sbjct: 128 NXGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+H + V+S G++L +++
Sbjct: 185 RYH-GRSAAVWSLGILLYDMV 204
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 99 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 148
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 149 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 207
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S+I +
Sbjct: 208 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 264
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 265 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 296
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 270 LGTGAFGTVYAGK---LQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G V+ + L D+ V + R RD + E + + ++HP +V +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 326 CSIERGEQ--------ILVYEFMPNGTLCQHLQRERGDGLSWPIR-LTVAMETAQAIAHL 376
GE +V E++ TL + E G P R + V + QA+
Sbjct: 80 T----GEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFS 132
Query: 377 HSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDPQ 434
H I HRD+K +NI++ KV DFG++R + ++ A GT YL P+
Sbjct: 133 HQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 435 YHQNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDVYS G VL E++T
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLT 214
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 20/213 (9%)
Query: 260 ATIGFSEKQRLGTGAFGTVYAGK-LQNDLLVAIKRIKHRDTDGIQ-----QVVNEIKLI- 312
AT + +G GA+GTVY + + VA+K ++ + G V E+ L+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 313 --SCVSHPNLVRLLG-CSIERGEQ----ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTV 365
HPN+VRL+ C+ R ++ LV+E + + L +L + GL +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 366 AMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ 425
+ + + LH+ I HRD+K NIL+ K+ADFGL+R+ +++
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV-- 180
Query: 426 GTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
T Y P+ + D++S G + E+
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 13/150 (8%)
Query: 268 QRLGTGAFGTVYAG-KLQNDLLVAIKRI--KHRDTDGIQQVVNEIKLISCVS-HPNLVRL 323
++LG GA+G V+ + +VA+K+I +++ Q+ EI +++ +S H N+V L
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 324 LGCSIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
L ++ LV+++M R + L + V + + I +LHS
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVI----RANILEPVHKQYVVYQLIKVIKYLHSG-- 128
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ HRD+K SNILL+ KVADFGLSR
Sbjct: 129 -GLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 35/229 (15%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + VA+K++ R I
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIH 70
Query: 303 -QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQR 351
++ E++L+ + H N++ LL S+E + + + L CQ L
Sbjct: 71 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 130
Query: 352 ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 131 DHVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 179
Query: 412 LGMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 180 HTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 35/230 (15%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + VA+K++ R I
Sbjct: 25 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIH 83
Query: 303 -QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQR 351
++ E++L+ + H N++ LL S+E + + + L CQ L
Sbjct: 84 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 143
Query: 352 ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 144 DHVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 192
Query: 412 LGMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIITA 460
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 193 HTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 33 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 82
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 83 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 141
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S+I +
Sbjct: 142 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 198
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 199 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + VA+K++ I
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQI-LVYEFM----PNGTLCQHLQRE 352
++ E++L+ + H N++ LL S+E + LV M N CQ L +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 122 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 171 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 35/229 (15%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + VA+K++ R I
Sbjct: 16 PTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIH 74
Query: 303 -QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQR 351
++ E++L+ + H N++ LL S+E + + + L CQ L
Sbjct: 75 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 134
Query: 352 ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 135 DHVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 183
Query: 412 LGMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 184 HTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRIKH---RDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G V+ A L++ VA+K ++ RD + E + + ++HP +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY- 78
Query: 326 CSIERGEQ--------ILVYEFMPNGTLCQHLQRERGDGLSWPIR-LTVAMETAQAIAHL 376
+ GE +V E++ TL + E G P R + V + QA+
Sbjct: 79 ---DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFS 132
Query: 377 HSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDPQ 434
H I HRD+K +NI++ KV DFG++R + ++ A GT YL P+
Sbjct: 133 HQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 435 YHQNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDVYS G VL E++T
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLT 214
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 33/229 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + VA+K++ I
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 85
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 146 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIITA 460
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 195 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 270 LGTGAFGTVYAGK---LQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G V+ + L D+ V + R RD + E + + ++HP +V +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY- 78
Query: 326 CSIERGEQ--------ILVYEFMPNGTLCQHLQRERGDGLSWPIR-LTVAMETAQAIAHL 376
+ GE +V E++ TL + E G P R + V + QA+
Sbjct: 79 ---DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFS 132
Query: 377 HSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDPQ 434
H I HRD+K +NI++ KV DFG++R + ++ A GT YL P+
Sbjct: 133 HQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 435 YHQNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDVYS G VL E++T
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLT 214
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ FGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQND-LLVAIKRI--KHRDTDGIQQVVNEIKLISCVS-HPN 319
F RLG G++G V+ + + D L A+KR R + + E+ V HP
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAM------ETAQAI 373
VRL E G L E +L QH + +W L A +T A+
Sbjct: 119 CVRLEQAWEEGGILYLQTELC-GPSLQQHCE-------AWGASLPEAQVWGYLRDTLLAL 170
Query: 374 AHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFG-LSRLGMTEISHISTAPQGTPGYLD 432
AHLHS + H D+K +NI L + K+ DFG L LG + +G P Y+
Sbjct: 171 AHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ---EGDPRYMA 224
Query: 433 PQYHQNFHLSDKSDVYSFGVVLVEI 457
P+ Q + +DV+S G+ ++E+
Sbjct: 225 PELLQGSY-GTAADVFSLGLTILEV 248
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 270 LGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QVVNEIKLISCVS--HPNL 320
LG+G FG+VY+G ++ ++L VAIK + K R +D + +V E+ L+ VS +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RLL +L+ E ERG L + + + +A+ H H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH--- 132
Query: 381 NPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY--HQ 437
N + HRDIK NIL+D N + K+ DFG G + T GT Y P++ +
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+H + V+S G++L +++
Sbjct: 190 RYH-GRSAAVWSLGILLYDMV 209
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 270 LGTGAFGTVY-AGKLQNDLLVAIKRIKH---RDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G V+ A L++ VA+K ++ RD + E + + ++HP +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY- 78
Query: 326 CSIERGEQ--------ILVYEFMPNGTLCQHLQRERGDGLSWPIR-LTVAMETAQAIAHL 376
+ GE +V E++ TL + E G P R + V + QA+
Sbjct: 79 ---DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFS 132
Query: 377 HSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDPQ 434
H I HRD+K +NI++ KV DFG++R + ++ A GT YL P+
Sbjct: 133 HQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 435 YHQNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDVYS G VL E++T
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLT 214
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 270 LGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QVVNEIKLISCVS--HPNL 320
LG+G FG+VY+G ++ ++L VAIK + K R +D + +V E+ L+ VS +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RLL +L+ E ERG L + + + +A+ H H
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH--- 131
Query: 381 NPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY--HQ 437
N + HRDIK NIL+D N + K+ DFG G + T GT Y P++ +
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYH 188
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+H + V+S G++L +++
Sbjct: 189 RYH-GRSAAVWSLGILLYDMV 208
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 270 LGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QVVNEIKLISCVS--HPNL 320
LG+G FG+VY+G ++ ++L VAIK + K R +D + +V E+ L+ VS +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RLL +L+ E ERG L + + + +A+ H H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH--- 132
Query: 381 NPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY--HQ 437
N + HRDIK NIL+D N + K+ DFG G + T GT Y P++ +
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+H + V+S G++L +++
Sbjct: 190 RYH-GRSAAVWSLGILLYDMV 209
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 69
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 128
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S+I +
Sbjct: 129 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 186 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 217
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 270 LGTGAFGTVYAGK---LQNDLLVAIKRIK-HRDTDGIQQVVNEIKLISCVSHPNLVRLLG 325
LG G V+ + L D+ V + R RD + E + + ++HP +V +
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY- 95
Query: 326 CSIERGEQ--------ILVYEFMPNGTLCQHLQRERGDGLSWPIR-LTVAMETAQAIAHL 376
+ GE +V E++ TL + E G P R + V + QA+
Sbjct: 96 ---DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFS 149
Query: 377 HSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDPQ 434
H I HRD+K +NI++ KV DFG++R + ++ A GT YL P+
Sbjct: 150 HQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 435 YHQNFHLSDKSDVYSFGVVLVEIIT 459
+ + +SDVYS G VL E++T
Sbjct: 207 QARGDSVDARSDVYSLGCVLYEVLT 231
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 141
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 142 IHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 141
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 142 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 270 LGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QVVNEIKLISCVS--HPNL 320
LG+G FG+VY+G ++ ++L VAIK + K R +D + +V E+ L+ VS +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RLL +L+ E ERG L + + + +A+ H H
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH--- 130
Query: 381 NPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY--HQ 437
N + HRDIK NIL+D N + K+ DFG G + T GT Y P++ +
Sbjct: 131 NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYH 187
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+H + V+S G++L +++
Sbjct: 188 RYH-GRSAAVWSLGILLYDMV 207
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 270 LGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QVVNEIKLISCVS--HPNL 320
LG+G FG+VY+G ++ ++L VAIK + K R +D + +V E+ L+ VS +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RLL +L+ E ERG L + + + +A+ H H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH--- 132
Query: 381 NPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY--HQ 437
N + HRDIK NIL+D N + K+ DFG G + T GT Y P++ +
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYH 189
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+H + V+S G++L +++
Sbjct: 190 RYH-GRSAAVWSLGILLYDMV 209
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 107/225 (47%), Gaps = 27/225 (12%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTLCQHLQRER--GD 355
++ E++L+ + H N++ LL S+E + + + L ++ ++ D
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDD 125
Query: 356 GLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMT 415
+ + I + + + ++HSA I HRD+K SN+ ++ + + K+ DFGL R
Sbjct: 126 HVQFLI-----YQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD 177
Query: 416 EISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 178 EM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 270 LGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QVVNEIKLISCVS--HPNL 320
LG+G FG+VY+G ++ ++L VAIK + K R +D + +V E+ L+ VS +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RLL +L+ E ERG L + + + +A+ H H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH--- 127
Query: 381 NPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY--HQ 437
N + HRDIK NIL+D N + K+ DFG G + T GT Y P++ +
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+H + V+S G++L +++
Sbjct: 185 RYH-GRSAAVWSLGILLYDMV 204
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ D GL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 270 LGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QVVNEIKLISCVS--HPNL 320
LG+G FG+VY+G ++ ++L VAIK + K R +D + +V E+ L+ VS +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RLL +L+ E ERG L + + + +A+ H H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH--- 127
Query: 381 NPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY--HQ 437
N + HRDIK NIL+D N + K+ DFG G + T GT Y P++ +
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYH 184
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+H + V+S G++L +++
Sbjct: 185 RYH-GRSAAVWSLGILLYDMV 204
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E++ T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEMAGFV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E++ T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEMAGFV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 121/309 (39%), Gaps = 52/309 (16%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLI 312
P+ ++E IG + +G G FG VY G+ ++ + + I+ + D ++ E+
Sbjct: 31 PFEQLE---IG----ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAY 83
Query: 313 SCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQA 372
H N+V +G + ++ TL + R+ L +A E +
Sbjct: 84 RQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYS-VVRDAKIVLDVNKTRQIAQEIVKG 142
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL-GMTEISHISTAPQGTPGY- 430
+ +LH+ I H+D+KS N+ D N K + DFGL + G+ + + G+
Sbjct: 143 MGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWL 198
Query: 431 ----------LDPQYHQN-FHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALA 479
L P ++ S SDV++ G + E+ + F P E
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL--HAREWPFKTQPAEA------ 250
Query: 480 ADRISKGRLDEIIDPLIIEHRGHSDAGTLASV---HKVAELAFRCLAFHRDMRPSMTEVA 536
II G L+ + +++++ C AF ++ RP+ T++
Sbjct: 251 ----------------IIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLM 294
Query: 537 TELEHIRTR 545
LE + R
Sbjct: 295 DMLEKLPKR 303
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 270 LGTGAFGTVYAGKL-QNDLLVAIKRIKHR-DTDGIQQVVNEIKLISCVSH--PNLVRLLG 325
+G+G G V+ + + ++A+K+++ + + ++++ ++ ++ SH P +V+ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV-LKSHDCPYIVQCFG 91
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
I + + E M GT + L++ + P R+ M A A + +
Sbjct: 92 TFITNTDVFIAMELM--GTCAEKLKKRMQGPI--PERILGKMTVAIVKALYYLKEKHGVI 147
Query: 386 HRDIKSSNILLDYNFKSKVADFGLS-RLGMTEISHIST--APQGTPGYLDPQYHQNFHLS 442
HRD+K SNILLD + K+ DFG+S RL + S A P +DP
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYD 207
Query: 443 DKSDVYSFGVVLVEIITA 460
++DV+S G+ LVE+ T
Sbjct: 208 IRADVWSLGISLVELATG 225
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 270 LGTGAFGTVYAG-KLQNDLLVAIKRI-KHRDTDGIQ-----QVVNEIKLISCVS--HPNL 320
LG+G FG+VY+G ++ ++L VAIK + K R +D + +V E+ L+ VS +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+RLL +L+ E ERG L + + + +A+ H H
Sbjct: 99 IRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH--- 154
Query: 381 NPPIYHRDIKSSNILLDYNF-KSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY--HQ 437
N + HRDIK NIL+D N + K+ DFG G + T GT Y P++ +
Sbjct: 155 NCGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYH 211
Query: 438 NFHLSDKSDVYSFGVVLVEII 458
+H + V+S G++L +++
Sbjct: 212 RYH-GRSAAVWSLGILLYDMV 231
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + VA+K++ I
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 122 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E++ T Y P+ N+ H + D++S G ++ E++T
Sbjct: 171 TDDEMAGFV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 103
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 162
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S I +
Sbjct: 163 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 219
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 220 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 251
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 257 IEKATIGFSEKQR----LGTGAFGTVYAGK-----LQNDLLVAIKRIKHRDTDGIQQVVN 307
++ +T FS++ + LG G+FG V K + + V KR + TD + ++
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK-ESLLR 75
Query: 308 EIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVA 366
E++L+ + HPN+ +L ++G LV E G L + R+R S +
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARII 132
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTA 423
+ I + H I HRD+K N+LL+ K ++ DFGLS E S
Sbjct: 133 RQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKXKD 187
Query: 424 PQGTPGYLDPQ-YHQNFHLSDKSDVYSFGVVLVEIITA 460
GT Y+ P+ H + +K DV+S GV+L +++
Sbjct: 188 KIGTAYYIAPEVLHGTY--DEKCDVWSTGVILYILLSG 223
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQI-LVYEFM----PNGTLCQHLQRE 352
++ E++L+ + H N++ LL S+E + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ D GL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 16/194 (8%)
Query: 268 QRLGTGAFGTVYAGKLQ-NDLLVAIKRIKHRD--TDGIQQVVNEIKLISCVSHPNLVRLL 324
++LG+GA+G V + + + AIK I+ T +++ E+ ++ + HPN+++L
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 325 GCSIERGEQILVYEFMPNGTLCQHL-QRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
++ LV E G L + R + + + + + + + +LH
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLH---KHN 156
Query: 384 IYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
I HRD+K N+LL+ K K+ DFGLS + E GT Y+ P+ + +
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLS--AVFENQKKMKERLGTAYYIAPEVLRKKY 214
Query: 441 LSDKSDVYSFGVVL 454
+K DV+S GV+L
Sbjct: 215 -DEKCDVWSIGVIL 227
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 269 RLGTGAFGTVYAGKLQ-NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGC- 326
+L G ++ G+ Q ND++V + +++ T + E + SHPN++ +LG
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 327 -SIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
S L+ +MP G+L L + + A++ A+ +A LH+ + P I
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIP 135
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK- 444
+ S ++++D + ++++ + + S S P ++ P+ Q
Sbjct: 136 RHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNR 189
Query: 445 --SDVYSFGVVLVEIIT 459
+D++SF V+L E++T
Sbjct: 190 RSADMWSFAVLLWELVT 206
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 33/214 (15%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNL 320
+ +++ + +G G+FG VY KL + LVAIK++ G E++++ + H N+
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNI 75
Query: 321 VRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVAMETAQA 372
VRL S E+ +++ LV +++P + +H R + ++L + + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM-YQLFRS 134
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST----AP 424
+A++HS I HRDIK N+LLD + K+ DFG ++ G +S I + AP
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 425 QGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
+ G D + DV+S G VL E++
Sbjct: 192 ELIFGATD--------YTSSIDVWSAGCVLAELL 217
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 11/200 (5%)
Query: 270 LGTGAFGTVY------AGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRL 323
+G GAF V G+ +V + + + + E + + HP++V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
L G +V+EFM LC + + G + + Q + L +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYS-EAVASHYMRQILEALRYCHDNN 150
Query: 384 IYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
I HRD+K N+LL S K+ DFG++ + + E ++ GTP ++ P+ +
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGRVGTPHFMAPEVVKREP 209
Query: 441 LSDKSDVYSFGVVLVEIITA 460
DV+ GV+L +++
Sbjct: 210 YGKPVDVWGCGVILFILLSG 229
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 270 LGTGAFG-----------TVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHP 318
+G GAFG VYA KL L + IK D+ + E +++ + P
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKL----LSKFEMIKRSDSAFFWE---ERDIMAFANSP 134
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
+V+L + +V E+MP G L +L W R A E A+ +HS
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWA-RFYTA-EVVLALDAIHS 191
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFG----LSRLGMTEISHISTAPQGTPGYLDPQ 434
HRD+K N+LLD + K+ADFG +++ GM GTP Y+ P+
Sbjct: 192 M---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD----TAVGTPDYISPE 244
Query: 435 YHQ----NFHLSDKSDVYSFGVVLVEIITA 460
+ + + + D +S GV L E++
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 143
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 144 IHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 81
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 82 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 140
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S I +
Sbjct: 141 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 198 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 229
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 270 LGTGAFG-----------TVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHP 318
+G GAFG VYA KL L + IK D+ + E +++ + P
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKL----LSKFEMIKRSDSAFFWE---ERDIMAFANSP 134
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
+V+L + +V E+MP G L +L W R A E A+ +HS
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWA-RFYTA-EVVLALDAIHS 191
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFG----LSRLGMTEISHISTAPQGTPGYLDPQ 434
HRD+K N+LLD + K+ADFG +++ GM GTP Y+ P+
Sbjct: 192 M---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD----TAVGTPDYISPE 244
Query: 435 YHQ----NFHLSDKSDVYSFGVVLVEIITA 460
+ + + + D +S GV L E++
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 270 LGTGAFG-----------TVYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHP 318
+G GAFG VYA KL L + IK D+ + E +++ + P
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKL----LSKFEMIKRSDSAFFWE---ERDIMAFANSP 129
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHS 378
+V+L + +V E+MP G L +L W R A E A+ +HS
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWA-RFYTA-EVVLALDAIHS 186
Query: 379 AINPPIYHRDIKSSNILLDYNFKSKVADFG----LSRLGMTEISHISTAPQGTPGYLDPQ 434
HRD+K N+LLD + K+ADFG +++ GM GTP Y+ P+
Sbjct: 187 M---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD----TAVGTPDYISPE 239
Query: 435 YHQ----NFHLSDKSDVYSFGVVLVEIITA 460
+ + + + D +S GV L E++
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + L VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ D GL+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 81
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 82 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 140
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S I +
Sbjct: 141 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 198 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRL---- 323
+G GA+G V A N + VAIK+I + Q+ + EIK++ H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAHLHSAIN 381
+IE+ + + + + + L + L+ + D + + + + + ++HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA-- 143
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDPQYHQNF 439
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+ N
Sbjct: 144 -NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 440 HLSDKS-DVYSFGVVLVEIIT 459
KS D++S G +L E+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLS 223
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 270 LGTGAFGTVYAGK---LQNDLLVAI---KRIKHRDTDGIQQVVNEIKLISCVSHPNLVRL 323
LG G+FG V K Q + V + K++DT I + E++L+ + HPN+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI---LREVELLKKLDHPNIMKL 86
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
+ +V E G L + + + R+ + + H H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN----- 141
Query: 384 IYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
I HRD+K NILL+ K K+ DFGLS GT Y+ P+ + +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVLRGTY 199
Query: 441 LSDKSDVYSFGVVLVEIITA 460
+K DV+S GV+L +++
Sbjct: 200 -DEKCDVWSAGVILYILLSG 218
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 28 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 77
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 78 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 136
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S I +
Sbjct: 137 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 193
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 194 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 225
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 270 LGTGAFGTVYAGK---LQNDLLVAI---KRIKHRDTDGIQQVVNEIKLISCVSHPNLVRL 323
LG G+FG V K Q + V + K++DT I + E++L+ + HPN+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI---LREVELLKKLDHPNIMKL 86
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
+ +V E G L + + + R+ + + H H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN----- 141
Query: 384 IYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
I HRD+K NILL+ K K+ DFGLS GT Y+ P+ + +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVLRGTY 199
Query: 441 LSDKSDVYSFGVVLVEIITA 460
+K DV+S GV+L +++
Sbjct: 200 -DEKCDVWSAGVILYILLSG 218
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 39 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 88
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 89 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 147
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S I +
Sbjct: 148 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 204
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 205 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 236
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRL---- 323
+G GA+G V A N + VAIK+I + Q+ + EIK++ H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAHLHSAIN 381
+IE+ + + + + + L + L+ + D + + + + + ++HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA-- 147
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDPQYHQNF 439
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+ N
Sbjct: 148 -NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 440 HLSDKS-DVYSFGVVLVEIIT 459
KS D++S G +L E+++
Sbjct: 207 KGYTKSIDIWSVGCILAEMLS 227
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRL---- 323
+G GA+G V A N + VAIK+I + Q+ + EIK++ H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAHLHSAIN 381
+IE+ + + + + + L + L+ + D + + + + + ++HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA-- 143
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDPQYHQNF 439
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+ N
Sbjct: 144 -NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 440 HLSDKS-DVYSFGVVLVEIIT 459
KS D++S G +L E+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLS 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 35/230 (15%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + VA+K++ R I
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIH 84
Query: 303 -QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQR 351
++ E++L+ + H N++ LL S+E + + + L CQ L
Sbjct: 85 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 144
Query: 352 ERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 145 DHVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 193
Query: 412 LGMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIITA 460
E+ T Y P+ N+ H + D++S G ++ E++T
Sbjct: 194 HTDDEM----XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 69
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 128
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S I +
Sbjct: 129 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 186 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 217
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 21 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 70
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 71 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 129
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S I +
Sbjct: 130 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 186
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 187 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 218
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 147
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 148 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 139
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 140 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLVRL---- 323
+G GA+G V A N + VAIK+I + Q+ + EIK++ H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAHLHSAIN 381
+IE+ + + + + + L + L+ + D + + + + + ++HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA-- 143
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDPQYHQNF 439
+ HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P+ N
Sbjct: 144 -NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 440 HLSDKS-DVYSFGVVLVEIIT 459
KS D++S G +L E+++
Sbjct: 203 KGYTKSIDIWSVGCILAEMLS 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 137
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 138 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 24 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 73
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 74 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 132
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S I +
Sbjct: 133 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 189
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 190 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 221
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 144
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 145 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 145
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 146 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 136
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 137 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 143
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 144 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 137
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 138 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 270 LGTGAFGTVYAGK---LQNDLLVAI---KRIKHRDTDGIQQVVNEIKLISCVSHPNLVRL 323
LG G+FG V K Q + V + K++DT I + E++L+ + HPN+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI---LREVELLKKLDHPNIMKL 86
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPP 383
+ +V E G L + + + R+ + + H H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN----- 141
Query: 384 IYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFH 440
I HRD+K NILL+ K K+ DFGLS GT Y+ P+ + +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVLRGTY 199
Query: 441 LSDKSDVYSFGVVLVEIITA 460
+K DV+S GV+L +++
Sbjct: 200 -DEKCDVWSAGVILYILLSG 218
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + L + L+ + D + + + + + +
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY-----FLYQILRGLKY 159
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 160 IHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 141
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 142 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPAFVAP 186
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 187 EIVNYEPLGLEADMWSIGVI 206
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 69
Query: 315 VSHPNLVRL---LGCSIERGEQI---LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL S E+ +++ LV +++P + +H R + ++L +
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 128
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S I +
Sbjct: 129 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 186 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 217
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 45/220 (20%)
Query: 262 IGFSEKQRLGTGAFGTVYAGKL-QNDLLVAI------KRIKHRDTDGIQQVVNEIKLISC 314
+ +++ + +G G+FG VY KL + LVAI KR K+R E++++
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----------ELQIMRK 69
Query: 315 VSHPNLVRLLGCSIERGEQI------LVYEFMPNGT--LCQHLQRERGDGLSWPIRLTVA 366
+ H N+VRL GE+ LV +++P + +H R + ++L +
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 128
Query: 367 METAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS-KVADFGLSRL---GMTEISHIST 422
+ +++A++HS I HRDIK N+LLD + K+ DFG ++ G +S I +
Sbjct: 129 YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 423 ----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
AP+ G D + DV+S G VL E++
Sbjct: 186 RYYRAPELIFGATD--------YTSSIDVWSAGCVLAELL 217
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 159
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 160 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGIQ-QVVNEIK 310
P R + + F K LG GA+G V A +VAIK+I+ D + + EIK
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK 61
Query: 311 LISCVSHPNLVRLLGC----SIERGEQILVYEFMPNGTLCQHL--QRERGDGLSWPIRLT 364
++ H N++ + S E ++ + + + L + + Q D + + I
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI--- 118
Query: 365 VAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAP 424
+T +A+ LH + + HRD+K SN+L++ N KV DFGL+R+ + E + ++ P
Sbjct: 119 --YQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI-IDESAADNSEP 172
Query: 425 QG----------TPGYLDPQYH-QNFHLSDKSDVYSFGVVLVEII 458
G T Y P+ + S DV+S G +L E+
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGIQ-QVVNEIK 310
P R + + F K LG GA+G V A +VAIK+I+ D + + EIK
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK 61
Query: 311 LISCVSHPNLVRLLGC----SIERGEQILVYEFMPNGTLCQHL--QRERGDGLSWPIRLT 364
++ H N++ + S E ++ + + + L + + Q D + + I
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI--- 118
Query: 365 VAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAP 424
+T +A+ LH + + HRD+K SN+L++ N KV DFGL+R+ + E + ++ P
Sbjct: 119 --YQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI-IDESAADNSEP 172
Query: 425 QG----------TPGYLDPQYH-QNFHLSDKSDVYSFGVVLVEII 458
G T Y P+ + S DV+S G +L E+
Sbjct: 173 TGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 139
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 140 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 97/200 (48%), Gaps = 23/200 (11%)
Query: 270 LGTGAFGTV---YAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLVRLL 324
+G+GA+G+V Y +L+ VA+K++ I ++ E++L+ + H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 325 -----GCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
SIE ++ + + L + + LS + + + + ++HSA
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIV---KSQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNF 439
I HRD+K SN+ ++ + + ++ DFGL+R E+ T T Y P+ N+
Sbjct: 151 ---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM----TGYVATRWYRAPEIMLNW 203
Query: 440 -HLSDKSDVYSFGVVLVEII 458
H + D++S G ++ E++
Sbjct: 204 MHYNQTVDIWSVGCIMAELL 223
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
+ + + LG G G V++ + D VAIK+I D ++ + EIK+I + H N+V+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 323 LLGCSIERGEQI--------------LVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAME 368
+ G Q+ +V E+M L L E+G L RL + +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL--EQGPLLEEHARLFM-YQ 128
Query: 369 TAQAIAHLHSAINPPIYHRDIKSSNILLDY-NFKSKVADFGLSRLGMTEISHISTAPQG- 426
+ + ++HSA + HRD+K +N+ ++ + K+ DFGL+R+ SH +G
Sbjct: 129 LLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 427 -TPGYLDPQYHQNFHLSDKS-DVYSFGVVLVEIITA 460
T Y P+ + + K+ D+++ G + E++T
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 253 PYREIEKATIGFSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGIQ-QVVNEIK 310
P R + + F K LG GA+G V A +VAIK+I+ D + + EIK
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIK 61
Query: 311 LISCVSHPNLVRLLGC----SIERGEQILVYEFMPNGTLCQHL--QRERGDGLSWPIRLT 364
++ H N++ + S E ++ + + + L + + Q D + + I
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI--- 118
Query: 365 VAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAP 424
+T +A+ LH + + HRD+K SN+L++ N KV DFGL+R+ + E + ++ P
Sbjct: 119 --YQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI-IDESAADNSEP 172
Query: 425 QG----------TPGYLDPQYH-QNFHLSDKSDVYSFGVVLVEII 458
G T Y P+ + S DV+S G +L E+
Sbjct: 173 TGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 143
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ--GTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H + T Y P
Sbjct: 144 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAIK+I + Q+ + EIK++ H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 144
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ--GTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H + T Y P
Sbjct: 145 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 44/223 (19%)
Query: 258 EKATIGFSEKQRLGTGAFGTVYAGKLQNDLLVAI------KRIKHRDTDGIQQVVNEIKL 311
E+ I ++ + +G G+FG V+ KL VAI KR K+R E+++
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----------ELQI 85
Query: 312 ISCVSHPNLVRLLGCSIERGEQI------LVYEFMPNGTL--CQHLQRERGDGLSWPIRL 363
+ V HPN+V L G++ LV E++P +H + + I+L
Sbjct: 86 MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKL 145
Query: 364 TVAMETAQAIAHLHSAINPPIYHRDIKSSNILLD-YNFKSKVADFGLSRL---GMTEISH 419
+ + +++A++HS I HRDIK N+LLD + K+ DFG +++ G +S
Sbjct: 146 YM-YQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX 201
Query: 420 IST----APQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
I + AP+ G + Y N D++S G V+ E++
Sbjct: 202 ICSRYYRAPELIFGATN--YTTNI------DIWSTGCVMAELM 236
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 264 FSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSH 317
FS + +G G FG VY GK+ + KRIK + + + +NE ++S VS
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL--ALNERIMLSLVST 247
Query: 318 PN--LVRLLGCSIERGEQI-LVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIA 374
+ + + + +++ + + M G L HL + G +R A E +
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAA-EIILGLE 305
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQ 434
H+H N + +RD+K +NILLD + +++D GL+ + H S GT GY+ P+
Sbjct: 306 HMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPE 359
Query: 435 YHQNFHLSDKS-DVYSFGVVLVEII 458
Q D S D +S G +L +++
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 264 FSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSH 317
FS + +G G FG VY GK+ + KRIK + + + +NE ++S VS
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL--ALNERIMLSLVST 248
Query: 318 PN--LVRLLGCSIERGEQI-LVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIA 374
+ + + + +++ + + M G L HL + G +R A E +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAA-EIILGLE 306
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQ 434
H+H N + +RD+K +NILLD + +++D GL+ + H S GT GY+ P+
Sbjct: 307 HMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPE 360
Query: 435 YHQNFHLSDKS-DVYSFGVVLVEII 458
Q D S D +S G +L +++
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 264 FSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSH 317
FS + +G G FG VY GK+ + KRIK + + + +NE ++S VS
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL--ALNERIMLSLVST 248
Query: 318 PN--LVRLLGCSIERGEQI-LVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIA 374
+ + + + +++ + + M G L HL + G +R A E +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAA-EIILGLE 306
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQ 434
H+H N + +RD+K +NILLD + +++D GL+ + H S GT GY+ P+
Sbjct: 307 HMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPE 360
Query: 435 YHQNFHLSDKS-DVYSFGVVLVEII 458
Q D S D +S G +L +++
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 264 FSEKQRLGTGAFGTVYA------GKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSH 317
FS + +G G FG VY GK+ + KRIK + + + +NE ++S VS
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL--ALNERIMLSLVST 248
Query: 318 PN--LVRLLGCSIERGEQI-LVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIA 374
+ + + + +++ + + M G L HL + G +R A E +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAA-EIILGLE 306
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQ 434
H+H N + +RD+K +NILLD + +++D GL+ + H S GT GY+ P+
Sbjct: 307 HMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPE 360
Query: 435 YHQNFHLSDKS-DVYSFGVVLVEII 458
Q D S D +S G +L +++
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQ-NDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
+++ Q +G GA+G V + VAIK+I + Q+ + EI+++ H N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 322 R----LLGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
L ++E + + + + L + L+ ++ D + + + + + +
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGLKY 159
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+L++ K+ DFGL+R+ E H T T Y P
Sbjct: 160 IHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 186
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 187 EIVNYEPLGLEADMWSIGVI 206
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI-QQVVNEIKLISCVSHPNLV 321
++ +G GA+G V A N + VAI++I + Q+ + EIK++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 322 RL----LGCSIERGEQILVYEFMPNGTLCQHLQRER--GDGLSWPIRLTVAMETAQAIAH 375
+ +IE+ + + + + + L + L+ + D + + + + + +
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKY 143
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS--TAPQGTPGYLDP 433
+HSA + HRD+K SN+LL+ K+ DFGL+R+ + H T T Y P
Sbjct: 144 IHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 434 QYHQNFHLSDKS-DVYSFGVVLVEIIT 459
+ N KS D++S G +L E+++
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 23/198 (11%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLV----AIKRIKHRD---TDGIQQVVNEIKLISCVSHPNL 320
++LG+GA+G V L D L AIK IK T +++E+ ++ + HPN+
Sbjct: 27 KKLGSGAYGEVL---LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI 83
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQH-LQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
++L ++ LV E G L + R++ + + + + +LH
Sbjct: 84 MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTTYLHKH 140
Query: 380 INPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYH 436
I HRD+K N+LL+ + K+ DFGLS E+ GT Y+ P+
Sbjct: 141 ---NIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKMKERLGTAYYIAPEVL 195
Query: 437 QNFHLSDKSDVYSFGVVL 454
+ + +K DV+S GV+L
Sbjct: 196 RKKY-DEKCDVWSCGVIL 212
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 307 NEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQR----ERGDGLSWPIR 362
NE+++I+ + + + G E ++YE+M N ++ + + ++ PI+
Sbjct: 92 NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 363 LT--VAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI 420
+ + + +++H+ N I HRD+K SNIL+D N + K++DFG S +
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYM---VDKK 206
Query: 421 STAPQGTPGYLDPQYHQN--FHLSDKSDVYSFGVVLVEIITALKVVDFS 467
+GT ++ P++ N + K D++S G+ L + VV FS
Sbjct: 207 IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLY--VMFYNVVPFS 253
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + VA+K++ I
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQILVYEFMPNGTL-----CQHLQRE 352
++ E++L+ + H N++ LL S+E + + + L C L +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDD 121
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DFGL+R
Sbjct: 122 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 171 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 186
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 187 EIVNYEPLGLEADMWSIGVI 206
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 186
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 187 EIVNYEPLGLEADMWSIGVI 206
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 22/199 (11%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R + G+ +++ E+ ++ V HPN+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L R + +L+ E + G L L ++ + LS + + + +LH+
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR--LGMTEISHISTAPQGTPGYLDPQ 434
I H D+K NI LLD N K+ DFGL+ E +I GTP ++ P+
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF----GTPEFVAPE 188
Query: 435 YHQNFHLSDKSDVYSFGVV 453
L ++D++S GV+
Sbjct: 189 IVNYEPLGLEADMWSIGVI 207
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 23/198 (11%)
Query: 268 QRLGTGAFGTVYAGKLQNDLLV----AIKRIKHRD---TDGIQQVVNEIKLISCVSHPNL 320
++LG+GA+G V K D L AIK IK T +++E+ ++ + HPN+
Sbjct: 10 KKLGSGAYGEVLLCK---DKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI 66
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQH-LQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
++L ++ LV E G L + R++ + + + + +LH
Sbjct: 67 MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTTYLH-- 121
Query: 380 INPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYH 436
I HRD+K N+LL+ + K+ DFGLS E+ GT Y+ P+
Sbjct: 122 -KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKMKERLGTAYYIAPEVL 178
Query: 437 QNFHLSDKSDVYSFGVVL 454
+ + +K DV+S GV+L
Sbjct: 179 RKKY-DEKCDVWSCGVIL 195
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 186
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 187 EIVNYEPLGLEADMWSIGVI 206
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 186
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 187 EIVNYEPLGLEADMWSIGVI 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 186
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 187 EIVNYEPLGLEADMWSIGVI 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 132
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 133 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 185
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 186 EIVNYEPLGLEADMWSIGVI 205
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 186
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 187 EIVNYEPLGLEADMWSIGVI 206
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 186
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 187 EIVNYEPLGLEADMWSIGVI 206
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 186
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 187 EIVNYEPLGLEADMWSIGVI 206
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 250 PIYPYREIEKATIGFSEKQR----LGTGAFGTVYAG-KLQNDLLVAIKRIKHRDTDGI-- 302
P + +E+ K E+ + +G+GA+G+V A + VA+K++ I
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 303 QQVVNEIKLISCVSHPNLVRLLGC-----SIERGEQI-LVYEFM----PNGTLCQHLQRE 352
++ E++L+ + H N++ LL S+E + LV M N CQ L +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 353 RGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRL 412
L + I + + ++HSA I HRD+K SN+ ++ + + K+ DF L+R
Sbjct: 126 HVQFLIYQI--------LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARH 174
Query: 413 GMTEISHISTAPQGTPGYLDPQYHQNF-HLSDKSDVYSFGVVLVEIIT 459
E+ T T Y P+ N+ H + D++S G ++ E++T
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 186
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 187 EIVNYEPLGLEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 132
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 133 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 185
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 186 EIVNYEPLGLEADMWSIGVI 205
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLG- 325
Q+LG G F V L + A+KRI + ++ E + +HPN++RL+
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 326 CSIERG---EQILVYEFMPNGTLCQHLQR--ERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
C ERG E L+ F GTL ++R ++G+ L+ L + + + + +H+
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK- 153
Query: 381 NPPIYHRDIKSSNILLDYNFKSKVADFGL----------SRLGMTEISHISTAPQGTPGY 430
HRD+K +NILL + + D G SR +T A + T Y
Sbjct: 154 --GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALT--LQDWAAQRCTISY 209
Query: 431 LDPQ-YHQNFH--LSDKSDVYSFGVVLVEII 458
P+ + H + +++DV+S G VL ++
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 302 IQQVVNEIKLISCVSHPNLVRLLGCSIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSW 359
I+QV EI ++ + HPN+V+L+ + E +V+E + G + ++ LS
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSE 136
Query: 360 PIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISH 419
+ + I +LH I HRDIK SN+L+ + K+ADFG+S +
Sbjct: 137 DQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 420 ISTAPQGTPGYLDPQYHQNFH--LSDKS-DVYSFGVVL 454
+S GTP ++ P+ S K+ DV++ GV L
Sbjct: 194 LSNT-VGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
++ + +G G++G V A + + A K+I + + + EI+++ + HPN++R
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 323 LLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINP 382
L + + LV E G L + + +R S R + + A+A+ H +N
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCHK-LN- 126
Query: 383 PIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNF 439
+ HRD+K N L + K+ DFGL+ + + GTP Y+ PQ +
Sbjct: 127 -VAHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKMMRTKVGTPYYVSPQVLEGL 183
Query: 440 HLSDKSDVYSFGVVLVEII 458
+ + D +S GV++ ++
Sbjct: 184 Y-GPECDEWSAGVMMYVLL 201
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R T G+ + + E+ ++ + HPN+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + IL+ E + G L L + + L+ + + +LHS
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL- 133
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSR---LGMTEISHISTAPQGTPGYLDP 433
I H D+K NI LLD N + K+ DFGL+ G E +I GTP ++ P
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIF----GTPEFVAP 186
Query: 434 QYHQNFHLSDKSDVYSFGVV 453
+ L ++D++S GV+
Sbjct: 187 EIVNYEPLGLEADMWSIGVI 206
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+G G++G V A + + A K+I + + + EI+++ + HPN++RL
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 93
Query: 329 ERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRD 388
+ + LV E G L + + +R S R + + A+A+ H +N + HRD
Sbjct: 94 DNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCHK-LN--VAHRD 148
Query: 389 IKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDKS 445
+K N L + K+ DFGL+ + + GTP Y+ PQ + + +
Sbjct: 149 LKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKMMRTKVGTPYYVSPQVLEGLY-GPEC 205
Query: 446 DVYSFGVVLVEII 458
D +S GV++ ++
Sbjct: 206 DEWSAGVMMYVLL 218
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 264 FSEKQRLGTGAFGTVY-AGKLQNDLLVAIKRIKHR--------DTDGIQQVVNEIKLISC 314
+S LG+GAFG V+ A + + V +K IK + + +V EI ++S
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 315 VSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIA 374
V H N++++L +G LV E +G L +R L P+ + + A+
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQ 434
+L I HRDIK NI++ +F K+ DFG + E + GT Y P+
Sbjct: 145 YLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSA--AYLERGKLFYTFCGTIEYCAPE 199
Query: 435 YHQ-NFHLSDKSDVYSFGVVLVEII 458
N + + +++S GV L ++
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 270 LGTGAFGTVYAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+G+G FG + Q++ LVA+K I+ R + V EI + HPN+VR +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 329 ERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+V E+ G L + + R D + + ++ +++ H+ +
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYCHAM---QVC 136
Query: 386 HRDIKSSNILLDYN--FKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSD 443
HRD+K N LLD + + K+ DFG S+ + ST GTP Y+ P+
Sbjct: 137 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDG 194
Query: 444 K-SDVYSFGVVL-VEIITALKVVDFSRPPN 471
K +DV+S GV L V ++ A D P N
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFEDPEEPKN 224
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 270 LGTGAFGTVYAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+G G FG + Q + LVA+K I+ R + V EI + HPN+VR +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 329 ERGEQILVYEFMPNGTL----CQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+V E+ G L C + + + +L + A A+ +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ---------V 136
Query: 385 YHRDIKSSNILLDYN--FKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLS 442
HRD+K N LLD + + K+ADFG S+ + S GTP Y+ P+
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV--GTPAYIAPEVLLKKEYD 194
Query: 443 DK-SDVYSFGVVL-VEIITALKVVDFSRPPN 471
K +DV+S GV L V ++ A D P N
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGL-SRLGMTEISHIS 421
L + ++ A+A+ LHS + HRD+K SNI + KV DFGL + + E
Sbjct: 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 422 TAPQ----------GTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITAL 461
P GT Y+ P+ + S K D++S G++L E++ +
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSF 273
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQ-NDLLVAIKRIKHRDTD-GIQQVVNEIKLISCVSHPNLV 321
F Q +G G FG V+ K + +D AIKRI+ + + ++V+ E+K ++ + HP +V
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 322 RLLGCSIE 329
R +E
Sbjct: 68 RYFNAWLE 75
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 54/239 (22%)
Query: 267 KQRLGTGAFGTV-YAGKLQNDLLVAIK-----RIKHRDTDGIQQVVNEIKLISCVSHPNL 320
K +G G++G V A + Q + AIK +I+ + ++++ E++L+ + HPN+
Sbjct: 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI 90
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQ------------------------------ 350
RL + LV E G L L
Sbjct: 91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI 150
Query: 351 -------RERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYN--FK 401
RE D + ++ M Q + LH N I HRDIK N L N F+
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMR--QIFSALHYLHNQGICHRDIKPENFLFSTNKSFE 208
Query: 402 SKVADFGLS----RLGMTEISHISTAPQGTPGYLDPQYHQ--NFHLSDKSDVYSFGVVL 454
K+ DFGLS +L E ++T GTP ++ P+ N K D +S GV+L
Sbjct: 209 IKLVDFGLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 43/224 (19%)
Query: 272 TGAFGTVYAGKLQNDLL-------------------VAIKRIKHRDTDGIQQVVNEIKLI 312
+G F VY +LQ D+L A+K I+ + +V E++++
Sbjct: 7 SGRFEDVY--QLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEML 64
Query: 313 -SCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETA 370
C H N++ L+ E LV+E M G++ H+ + R + L + V + A
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVA 121
Query: 371 QAIAHLHSAINPPIYHRDIKSSNILLDYNFK---SKVADFGL-SRLGMT-EISHIST--- 422
A+ LH N I HRD+K NIL ++ + K+ DFGL S + + + S IST
Sbjct: 122 SALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL 178
Query: 423 -APQGTPGYLDPQYHQNFH-----LSDKSDVYSFGVVLVEIITA 460
P G+ Y+ P+ + F + D++S GV+L +++
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 270 LGTGAFGTVYAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+G+G FG + Q++ LVA+K I+ R V EI + HPN+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 329 ERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+V E+ G L + + R D + + ++ +++ H+ +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYCHAM---QVC 137
Query: 386 HRDIKSSNILLDYN--FKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSD 443
HRD+K N LLD + + K+ DFG S+ + ST GTP Y+ P+
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDG 195
Query: 444 K-SDVYSFGVVL-VEIITALKVVDFSRPPN 471
K +DV+S GV L V ++ A D P N
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLVRLLGC 326
+G+GA+G+V A ++ VAIK++ I ++ E+ L+ + H N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 327 SIERGEQILVYEFMPNGTLCQ-HLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
Y+F Q LQ+ G S + + + + ++HSA +
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVV 148
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEIS-HISTAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K N+ ++ + + K+ DFGL+R E++ ++ T P + H N
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN----QT 204
Query: 445 SDVYSFGVVLVEIIT 459
D++S G ++ E++T
Sbjct: 205 VDIWSVGCIMAEMLT 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLVRLLGC 326
+G+GA+G+V A ++ VAIK++ I ++ E+ L+ + H N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 327 SIERGEQILVYEFMPNGTLCQ-HLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
Y+F Q LQ+ G S + + + + ++HSA +
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA---GVV 166
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEIS-HISTAPQGTPGYLDPQYHQNFHLSDK 444
HRD+K N+ ++ + + K+ DFGL+R E++ ++ T P + H N
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN----QT 222
Query: 445 SDVYSFGVVLVEIITA 460
D++S G ++ E++T
Sbjct: 223 VDIWSVGCIMAEMLTG 238
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 110/255 (43%), Gaps = 40/255 (15%)
Query: 233 RKSTKRCLKEARG--ISNIPIYPYREIEKATIGFSEKQRLGTGAFGTV-YAGKLQNDLLV 289
RK R K+ R I+NIP + E + SEK LG G+ GTV + G Q V
Sbjct: 6 RKRGSRGGKKGRKSRIANIPNF---EQSLKNLVVSEKI-LGYGSSGTVVFQGSFQGRP-V 60
Query: 290 AIKRIKHRDTDGIQQVVNEIKLIS-CVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQH 348
A+KR+ D + EIKL++ HPN++R CS + + + N L
Sbjct: 61 AVKRML---IDFCDIALMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDL 116
Query: 349 LQRERGDGLSWPIR-----LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDY----- 398
++ + + ++ +++ + A +AHLHS I HRD+K NIL+
Sbjct: 117 VESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFT 173
Query: 399 --------NFKSKVADFGLSRL---GMTEISHISTAPQGTPGYLDPQYHQ---NFHLSDK 444
N + ++DFGL + G P GT G+ P+ + L+
Sbjct: 174 ADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRS 233
Query: 445 SDVYSFGVVLVEIIT 459
D++S G V I++
Sbjct: 234 IDIFSMGCVFYYILS 248
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 33/208 (15%)
Query: 270 LGTGAFGTVYAGKLQN-DLLVAIKRIKHRDTDGIQQVVNEIKLI-----SCVSHPNLVRL 323
+G GAFG V KL+N D + A+K ++N+ +++ +C V +
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMK------------ILNKWEMLKRAETACFREERDVLV 129
Query: 324 LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGL-----SWPIRLTVAME---TAQAIAH 375
G S + L Y F + L + G L + RL M A+ +
Sbjct: 130 NGDS--KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIA 187
Query: 376 LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQY 435
+ S HRDIK NIL+D N ++ADFG M + + S+ GTP Y+ P+
Sbjct: 188 IDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEI 247
Query: 436 HQNFH-----LSDKSDVYSFGVVLVEII 458
Q + D +S GV + E++
Sbjct: 248 LQAMEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 110/255 (43%), Gaps = 40/255 (15%)
Query: 233 RKSTKRCLKEARG--ISNIPIYPYREIEKATIGFSEKQRLGTGAFGTV-YAGKLQNDLLV 289
RK R K+ R I+NIP + E + SEK LG G+ GTV + G Q V
Sbjct: 6 RKRGSRGGKKGRKSRIANIPNF---EQSLKNLVVSEKI-LGYGSSGTVVFQGSFQGRP-V 60
Query: 290 AIKRIKHRDTDGIQQVVNEIKLIS-CVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQH 348
A+KR+ D + EIKL++ HPN++R CS + + + N L
Sbjct: 61 AVKRML---IDFCDIALMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDL 116
Query: 349 LQRERGDGLSWPIR-----LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDY----- 398
++ + + ++ +++ + A +AHLHS I HRD+K NIL+
Sbjct: 117 VESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFT 173
Query: 399 --------NFKSKVADFGLSRL---GMTEISHISTAPQGTPGYLDPQYHQ---NFHLSDK 444
N + ++DFGL + G P GT G+ P+ + L+
Sbjct: 174 ADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRS 233
Query: 445 SDVYSFGVVLVEIIT 459
D++S G V I++
Sbjct: 234 IDIFSMGCVFYYILS 248
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 19/186 (10%)
Query: 303 QQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR 362
+++ EI + + +P++V G + +V E +L + +R + ++ P
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEA 128
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIST 422
+T Q + +LH N + HRD+K N+ L+ + K+ DFGL+ T+I
Sbjct: 129 RYFMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA----TKIEFDGE 181
Query: 423 APQ---GTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALA 479
+ GTP Y+ P+ S + D++S G +L ++ +PP E +
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCLKET 234
Query: 480 ADRISK 485
RI K
Sbjct: 235 YIRIKK 240
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 303 QQVVNEIKLISCVS-HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI 361
+ + E+ ++ VS HPN+++L LV++ M G L +L + LS
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKE 112
Query: 362 RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLS-RLGMTE-ISH 419
+ + I LH +N I HRD+K NILLD + K+ DFG S +L E +
Sbjct: 113 TRKIMRALLEVICALHK-LN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 169
Query: 420 ISTAPQGTPGYLDPQY--------HQNFHLSDKSDVYSFGVVLVEIITA 460
+ GTP YL P+ H + + D++S GV++ ++
Sbjct: 170 VC----GTPSYLAPEIIECSMNDNHPGY--GKEVDMWSTGVIMYTLLAG 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Query: 303 QQVVNEIKLISCVS-HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI 361
+ + E+ ++ VS HPN+++L LV++ M G L +L + LS
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKE 125
Query: 362 RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIS 421
+ + I LH +N I HRD+K NILLD + K+ DFG S +
Sbjct: 126 TRKIMRALLEVICALHK-LN--IVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKL 180
Query: 422 TAPQGTPGYLDPQY--------HQNFHLSDKSDVYSFGVVLVEIITA 460
+ GTP YL P+ H + + D++S GV++ ++
Sbjct: 181 RSVCGTPSYLAPEIIECSMNDNHPGY--GKEVDMWSTGVIMYTLLAG 225
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 268 QRLGTGAFGTVYAGKLQ-NDLLVAIKRIKHR--DTDGIQQVVNEIKLISCVSHPNLVRL- 323
+ +G GA+G V + + + VAIK+I + ++ + E+K++ H N++ +
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 324 --LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
L ++ GE VY + H L+ + + + ++HSA
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA-- 178
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSR---LGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K SN+L++ N + K+ DFG++R E + T T Y P+ +
Sbjct: 179 -QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 237
Query: 439 FH-LSDKSDVYSFGVVLVEIIT 459
H + D++S G + E++
Sbjct: 238 LHEYTQAIDLWSVGCIFGEMLA 259
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 24/252 (9%)
Query: 245 GISNIPIYPYREIEKATIGFSEKQRLGTGAFGT----VYAGKLQNDLLVAIKRIKHRDTD 300
G+ +I +R + T G+ K+ +G G++ ++ ++ A+K I D
Sbjct: 5 GVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKA---TNMEFAVKIIDKSKRD 61
Query: 301 GIQQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWP 360
+++ EI L+ HPN++ L + +V E M G L + R++ S
Sbjct: 62 PTEEI--EI-LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSER 116
Query: 361 IRLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILL---DYNFKS-KVADFGLSRLGMTE 416
V + + +LH+ + HRD+K SNIL N +S ++ DFG ++ E
Sbjct: 117 EASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173
Query: 417 ISHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLA 476
+ T P T ++ P+ + D++S GV+L ++T F+ P++
Sbjct: 174 NGLLMT-PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGY--TPFANGPDDTPEE 230
Query: 477 ALAADRISKGRL 488
LA RI G+
Sbjct: 231 ILA--RIGSGKF 240
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 303 QQVVNEIKLISCVS-HPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPI 361
+ + E+ ++ VS HPN+++L LV++ M G L +L + LS
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKE 125
Query: 362 RLTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLS-RLGMTE-ISH 419
+ + I LH +N I HRD+K NILLD + K+ DFG S +L E +
Sbjct: 126 TRKIMRALLEVICALHK-LN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 420 ISTAPQGTPGYLDPQY--------HQNFHLSDKSDVYSFGVVLVEIITA 460
+ GTP YL P+ H + + D++S GV++ ++
Sbjct: 183 VC----GTPSYLAPEIIECSMNDNHPGY--GKEVDMWSTGVIMYTLLAG 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 339 FMPNGTLCQHLQRERGDGL-SWPIRL----TVAMETAQAIAHLHSAINPPIYHRDIKSSN 393
F + +L + E DG PI + + + + A+ + L S HRD+ + N
Sbjct: 173 FQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARN 229
Query: 394 ILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDKSDVYSFGV 452
ILL N K+ DFGL+R ++ P ++ P+ + S KSDV+S+GV
Sbjct: 230 ILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGV 289
Query: 453 VLVEIIT 459
+L EI +
Sbjct: 290 LLWEIFS 296
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 268 QRLGTGAFGTVYAG------KLQNDLLVAIKRIKHRDTDG-IQQVVNEIKLISCVSHP-N 319
+ LG GAFG V K VA+K +K T + ++ E+K+++ + H N
Sbjct: 33 KSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLN 92
Query: 320 LVRLLG-CSIERGEQILVYEFMPNGTLCQHLQRER 353
+V LLG C+ + G +++ E+ G L +L+ +R
Sbjct: 93 VVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKR 127
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 303 QQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR 362
+++ EI + + +P++V G + +V E +L + +R + ++ P
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEA 144
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIST 422
+T Q + +LH N + HRD+K N+ L+ + K+ DFGL+ T+I
Sbjct: 145 RYFMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA----TKIEFDGE 197
Query: 423 APQ---GTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALA 479
+ GTP Y+ P+ S + D++S G +L ++ +PP E +
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCLKET 250
Query: 480 ADRISKGR--LDEIIDPL---IIEHRGHSDAGTLASV 511
RI K + I+P+ +I H+D SV
Sbjct: 251 YIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSV 287
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R + G+ +++ E+ ++ V H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L R + +L+ E + G L L ++ + LS + + + +LH+
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQ 434
I H D+K NI LLD N K+ DFGL+ E +I GTP ++ P+
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF----GTPEFVAPE 188
Query: 435 YHQNFHLSDKSDVYSFGVV 453
L ++D++S GV+
Sbjct: 189 IVNYEPLGLEADMWSIGVI 207
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 268 QRLGTGAFGTVYAGKLQ-NDLLVAIKRIKHRD--TDGIQQVVNEIKLISCVSHPNLVRL- 323
+ +G GA+G V + + + VAIK+I + ++ + E+K++ H N++ +
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 324 --LGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAIN 381
L ++ GE VY + H L+ + + + ++HSA
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA-- 177
Query: 382 PPIYHRDIKSSNILLDYNFKSKVADFGLSR---LGMTEISHISTAPQGTPGYLDPQYHQN 438
+ HRD+K SN+L++ N + K+ DFG++R E + T T Y P+ +
Sbjct: 178 -QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 236
Query: 439 FH-LSDKSDVYSFGVVLVEIIT 459
H + D++S G + E++
Sbjct: 237 LHEYTQAIDLWSVGCIFGEMLA 258
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 127/307 (41%), Gaps = 49/307 (15%)
Query: 254 YREIEKATIGFSEKQRLGTGAFGTVYAGKL----------QNDLLVAIKRIKHRDTDGIQ 303
+ +I + F+E LG G F ++ G + ++L+ + HR+ +
Sbjct: 2 FHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS--E 57
Query: 304 QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIR 362
++S +SH +LV G + E ILV EF+ G+L +L++ + + W +
Sbjct: 58 SFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--K 115
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIST 422
L VA + A A+ L + H ++ + NILL K + +L IS I+
Sbjct: 116 LEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITV 171
Query: 423 AP----QGTPGYLDPQYHQN-FHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAA 477
P Q ++ P+ +N +L+ +D +SFG L EI + + L+A
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG----------GDKPLSA 221
Query: 478 LAADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVAT 537
L + R + E R A A ++A L C+ + D RPS +
Sbjct: 222 LDSQRKLQ----------FYEDRHQLPAPKAA---ELANLINNCMDYEPDHRPSFRAIIR 268
Query: 538 ELEHIRT 544
+L + T
Sbjct: 269 DLNSLFT 275
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R + G+ +++ E+ ++ V H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L R + +L+ E + G L L ++ + LS + + + +LH+
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQ 434
I H D+K NI LLD N K+ DFGL+ E +I GTP ++ P+
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF----GTPEFVAPE 188
Query: 435 YHQNFHLSDKSDVYSFGVV 453
L ++D++S GV+
Sbjct: 189 IVNYEPLGLEADMWSIGVI 207
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 19/186 (10%)
Query: 303 QQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR 362
+++ EI + + +P++V G + +V E +L + +R + ++ P
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEA 144
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIST 422
+T Q + +LH N + HRD+K N+ L+ + K+ DFGL+ T+I
Sbjct: 145 RYFMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA----TKIEFDGE 197
Query: 423 APQ---GTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALA 479
+ GTP Y+ P+ S + D++S G +L ++ +PP E +
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCLKET 250
Query: 480 ADRISK 485
RI K
Sbjct: 251 YIRIKK 256
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 270 LGTGAFGT--VYAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCS 327
+G+G FG + KL +L VA+K I+ R + V EI + HPN+VR
Sbjct: 28 IGSGNFGVARLMRDKLTKEL-VAVKYIE-RGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 328 IERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPI 384
+ ++ E+ G L + + R D + + +++ HS I
Sbjct: 86 LTPTHLAIIMEYASGGELYERICNAGRFSEDEARF-----FFQQLLSGVSYCHSM---QI 137
Query: 385 YHRDIKSSNILLDYN--FKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLS 442
HRD+K N LLD + + K+ DFG S+ + ST GTP Y+ P+
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLRQEYD 195
Query: 443 DK-SDVYSFGVVL-VEIITALKVVDFSRP 469
K +DV+S GV L V ++ A D P
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEP 224
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 303 QQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR 362
+++ EI + + +P++V G + +V E +L + +R + ++ P
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEA 144
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIST 422
+T Q + +LH N + HRD+K N+ L+ + K+ DFGL+ T+I
Sbjct: 145 RYFMRQTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA----TKIEFDGE 197
Query: 423 APQ---GTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALA 479
+ GTP Y+ P+ S + D++S G +L ++ +PP E +
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG-------KPPFETSCLKET 250
Query: 480 ADRISKGR--LDEIIDPL---IIEHRGHSDAGTLASV 511
RI K + I+P+ +I H+D SV
Sbjct: 251 YIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSV 287
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 5/161 (3%)
Query: 303 QQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR 362
+ + E + + HP++V LL G +V+EFM LC + + G +
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYS-E 131
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISH 419
+ Q + L + I HRD+K +LL S K+ FG++ + + E
Sbjct: 132 AVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGL 190
Query: 420 ISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
++ GTP ++ P+ + DV+ GV+L +++
Sbjct: 191 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 85/197 (43%), Gaps = 13/197 (6%)
Query: 269 RLGTGAFGTVYAGKLQ-NDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGC- 326
+L G ++ G+ Q ND++V + +++ T + E + SHPN++ +LG
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 327 -SIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
S L+ + P G+L L + + A++ A+ A LH+ + P I
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLIP 135
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSDK- 444
+ S ++ +D + ++++ + S S P ++ P+ Q
Sbjct: 136 RHALNSRSVXIDEDXTARIS------XADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNR 189
Query: 445 --SDVYSFGVVLVEIIT 459
+D +SF V+L E++T
Sbjct: 190 RSADXWSFAVLLWELVT 206
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R + G+ +++ E+ ++ V H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L R + +L+ E + G L L ++ + LS + + + +LH+
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQ 434
I H D+K NI LLD N K+ DFGL+ E +I GTP ++ P+
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF----GTPEFVAPE 188
Query: 435 YHQNFHLSDKSDVYSFGVV 453
L ++D++S GV+
Sbjct: 189 IVNYEPLGLEADMWSIGVI 207
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 5/161 (3%)
Query: 303 QQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR 362
+ + E + + HP++V LL G +V+EFM LC + + G +
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYS-E 129
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISH 419
+ Q + L + I HRD+K +LL S K+ FG++ + + E
Sbjct: 130 AVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGL 188
Query: 420 ISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITA 460
++ GTP ++ P+ + DV+ GV+L +++
Sbjct: 189 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R + G+ +++ E+ ++ V H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L R + +L+ E + G L L ++ + LS + + + +LH+
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQ 434
I H D+K NI LLD N K+ DFGL+ E +I GTP ++ P+
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF----GTPEFVAPE 188
Query: 435 YHQNFHLSDKSDVYSFGVV 453
L ++D++S GV+
Sbjct: 189 IVNYEPLGLEADMWSIGVI 207
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 9/201 (4%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPN 319
F + + LG G FG V A +++ +++ + + G +NE +++ V+
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
+V L + LV M G L H+ G + A E + LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNF 439
I +RD+K NILLD + +++D GL+ + + E I GT GY+ P+ +N
Sbjct: 306 R---IVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIK-GRVGTVGYMAPEVVKNE 360
Query: 440 HLSDKSDVYSFGVVLVEIITA 460
+ D ++ G +L E+I
Sbjct: 361 RYTFSPDWWALGCLLYEMIAG 381
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 268 QRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTD----GI--QQVVNEIKLISCVSHPNL 320
+ LG+G F V + ++ L A K IK R + G+ +++ E+ ++ V H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L R + +L+ E + G L L ++ + LS + + + +LH+
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSRL--GMTEISHISTAPQGTPGYLDPQ 434
I H D+K NI LLD N K+ DFGL+ E +I GTP ++ P+
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF----GTPEFVAPE 188
Query: 435 YHQNFHLSDKSDVYSFGVV 453
L ++D++S GV+
Sbjct: 189 IVNYEPLGLEADMWSIGVI 207
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 264 FSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNL 320
+ + Q +G+GA+G V A + VAIK++ + ++ E++L+ + H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 321 VRLLGCSI------ERGEQILVYEFMPN--GTLCQH--LQRERGDGLSWPIRLTVAMETA 370
+ LL + + LV FM G L +H L +R L + +
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVY--------QML 138
Query: 371 QAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGY 430
+ + ++H+A I HRD+K N+ ++ + + K+ DFGL+R +E+ T Y
Sbjct: 139 KGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWY 191
Query: 431 LDPQYHQNF-HLSDKSDVYSFGVVLVEIITA 460
P+ N+ + D++S G ++ E+IT
Sbjct: 192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 126/307 (41%), Gaps = 49/307 (15%)
Query: 254 YREIEKATIGFSEKQRLGTGAFGTVYAGKL----------QNDLLVAIKRIKHRDTDGIQ 303
+ +I + F+E LG G F ++ G + ++L+ + HR+ +
Sbjct: 2 FHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS--E 57
Query: 304 QVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIR 362
++S +SH +LV G E ILV EF+ G+L +L++ + + W +
Sbjct: 58 SFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--K 115
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHIST 422
L VA + A A+ L + H ++ + NILL K + +L IS I+
Sbjct: 116 LEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITV 171
Query: 423 AP----QGTPGYLDPQYHQN-FHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAA 477
P Q ++ P+ +N +L+ +D +SFG L EI + + L+A
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG----------GDKPLSA 221
Query: 478 LAADRISKGRLDEIIDPLIIEHRGHSDAGTLASVHKVAELAFRCLAFHRDMRPSMTEVAT 537
L + R + E R A A ++A L C+ + D RPS +
Sbjct: 222 LDSQRKLQ----------FYEDRHQLPAPKAA---ELANLINNCMDYEPDHRPSFRAIIR 268
Query: 538 ELEHIRT 544
+L + T
Sbjct: 269 DLNSLFT 275
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 32/209 (15%)
Query: 268 QRLGTGAFGTV-----------YAGKLQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV- 315
+ LG G F V YA K +K+ + R D ++++EI ++
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKF-------LKK-RRRGQDCRAEILHEIAVLELAK 86
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
S P ++ L E IL+ E+ G + E + +S + + + + + +
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYY 146
Query: 376 LHSAINPPIYHRDIKSSNILLDYNF---KSKVADFGLSRLGMTEISHISTAPQ--GTPGY 430
LH I H D+K NILL + K+ DFG+SR +I H + GTP Y
Sbjct: 147 LHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACELREIMGTPEY 199
Query: 431 LDPQYHQNFHLSDKSDVYSFGVVLVEIIT 459
L P+ ++ +D+++ G++ ++T
Sbjct: 200 LAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 9/201 (4%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQND----LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPN 319
F + + LG G FG V A +++ +++ + + G +NE +++ V+
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 320 LVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSA 379
+V L + LV M G L H+ G + A E + LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNF 439
I +RD+K NILLD + +++D GL+ + + E I GT GY+ P+ +N
Sbjct: 306 R---IVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIK-GRVGTVGYMAPEVVKNE 360
Query: 440 HLSDKSDVYSFGVVLVEIITA 460
+ D ++ G +L E+I
Sbjct: 361 RYTFSPDWWALGCLLYEMIAG 381
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 270 LGTGAFGTVYAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+G+G FG + Q++ LVA+K I+ R + V EI + HPN+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 329 ERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+V E+ G L + + R D + + ++ +++ H+ +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYCHAM---QVC 137
Query: 386 HRDIKSSNILLDYN--FKSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYHQNFHLSD 443
HRD+K N LLD + + K+ FG S+ + ST GTP Y+ P+
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDG 195
Query: 444 K-SDVYSFGVVL-VEIITALKVVDFSRPPN 471
K +DV+S GV L V ++ A D P N
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 43/224 (19%)
Query: 272 TGAFGTVYAGKLQNDLL-------------------VAIKRIKHRDTDGIQQVVNEIKLI 312
+G F VY +LQ D+L A+K I+ + +V E++++
Sbjct: 7 SGRFEDVY--QLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEML 64
Query: 313 -SCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERG-DGLSWPIRLTVAMETA 370
C H N++ L+ E LV+E M G++ H+ + R + L + V + A
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVA 121
Query: 371 QAIAHLHSAINPPIYHRDIKSSNILLDYNFK---SKVADFGL-SRLGMT-EISHIST--- 422
A+ LH N I HRD+K NIL ++ + K+ DF L S + + + S IST
Sbjct: 122 SALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 423 -APQGTPGYLDPQYHQNFH-----LSDKSDVYSFGVVLVEIITA 460
P G+ Y+ P+ + F + D++S GV+L +++
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 28/202 (13%)
Query: 268 QRLGTGAFGTV-----------YAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCV 315
+ LG+G F V YA K ++ L + +R R +++ E+ ++ +
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSR-----EEIEREVNILREI 86
Query: 316 SHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAH 375
HPN++ L + + +L+ E + G L L + + L+ + + +
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHY 144
Query: 376 LHSAINPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSRLGMTEISHISTAPQGTPGYL 431
LHS I H D+K NI LLD N + K+ DFG++ E + GTP ++
Sbjct: 145 LHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIFGTPEFV 199
Query: 432 DPQYHQNFHLSDKSDVYSFGVV 453
P+ L ++D++S GV+
Sbjct: 200 APEIVNYEPLGLEADMWSIGVI 221
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 246 ISNIPIYPYREIEKATIGFSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGIQQ 304
I+NIP + E + SEK LG G+ GTV + G Q VA+KR+ D
Sbjct: 3 IANIPNF---EQSLKNLVVSEKI-LGYGSSGTVVFQGSFQGRP-VAVKRML---IDFCDI 54
Query: 305 VVNEIKLIS-CVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR- 362
+ EIKL++ HPN++R CS + + + N L ++ + + ++
Sbjct: 55 ALMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQK 113
Query: 363 ----LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDY-------------NFKSKVA 405
+++ + A +AHLHS I HRD+K NIL+ N + ++
Sbjct: 114 EYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170
Query: 406 DFGLSRL---GMTEISHISTAPQGTPGYLDPQYHQNFH-------LSDKSDVYSFGVVLV 455
DFGL + G + P GT G+ P+ + + L+ D++S G V
Sbjct: 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 456 EIIT 459
I++
Sbjct: 231 YILS 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 18/197 (9%)
Query: 268 QRLGTGAFGTVY------AGKLQNDLLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNL 320
+ LG+G F V GK + +R+ R +++ E+ ++ + HPN+
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + +L+ E + G L L + + L+ + + +LHS
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK- 127
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYH 436
I H D+K NI LLD N + K+ DFG++ E + GTP ++ P+
Sbjct: 128 --RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIFGTPEFVAPEIV 183
Query: 437 QNFHLSDKSDVYSFGVV 453
L ++D++S GV+
Sbjct: 184 NYEPLGLEADMWSIGVI 200
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 18/197 (9%)
Query: 268 QRLGTGAFGTVY------AGKLQNDLLVAIKRIKH-RDTDGIQQVVNEIKLISCVSHPNL 320
+ LG+G F V GK + +R+ R +++ E+ ++ + HPN+
Sbjct: 18 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQAIAHLHSAI 380
+ L + + +L+ E + G L L + + L+ + + +LHS
Sbjct: 78 ITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK- 134
Query: 381 NPPIYHRDIKSSNI-LLDYNF---KSKVADFGLSRLGMTEISHISTAPQGTPGYLDPQYH 436
I H D+K NI LLD N + K+ DFG++ E + GTP ++ P+
Sbjct: 135 --RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKNIFGTPEFVAPEIV 190
Query: 437 QNFHLSDKSDVYSFGVV 453
L ++D++S GV+
Sbjct: 191 NYEPLGLEADMWSIGVI 207
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 41/243 (16%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR--------DTDGIQQVVNEIKLISCVSHPNL 320
LG+GA G V A + + VAIK I R + D V EI+++ ++HP +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVA------METAQAIA 374
+++ + + +V E M G L + + RL A + A+
Sbjct: 84 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLLAVQ 134
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LH I HRD+K N+LL + K+ DFG S++ + E S + T GTP YL
Sbjct: 135 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTL-CGTPTYL 189
Query: 432 DPQYHQNFHLSDKS---DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
P+ + + + D +S GV+L ++ FS +V+L D+I+ G+
Sbjct: 190 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL----KDQITSGKY 243
Query: 489 DEI 491
+ I
Sbjct: 244 NFI 246
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFH---- 440
HRDIK N+LLD N ++ADFG S L M + + S+ GTP Y+ P+ Q
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 441 -LSDKSDVYSFGVVLVEII 458
+ D +S GV + E++
Sbjct: 257 KYGPECDWWSLGVCMYEML 275
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 42/244 (17%)
Query: 246 ISNIPIYPYREIEKATIGFSEKQRLGTGAFGTV-YAGKLQNDLLVAIKRIKHRDTDGIQQ 304
I+NIP + E + SEK LG G+ GTV + G Q VA+KR+ D
Sbjct: 3 IANIPNF---EQSLKNLVVSEKI-LGYGSSGTVVFQGSFQGRP-VAVKRML---IDFCDI 54
Query: 305 VVNEIKLIS-CVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR- 362
+ EIKL++ HPN++R CS + + + N L ++ + + ++
Sbjct: 55 ALMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQK 113
Query: 363 ----LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILLDY-------------NFKSKVA 405
+++ + A +AHLHS I HRD+K NIL+ N + ++
Sbjct: 114 EYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170
Query: 406 DFGLSRL---GMTEISHISTAPQGTPGYLDPQYHQNFH-------LSDKSDVYSFGVVLV 455
DFGL + G P GT G+ P+ + + L+ D++S G V
Sbjct: 171 DFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 456 EIIT 459
I++
Sbjct: 231 YILS 234
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDG-----------IQQVVNEIKLI 312
++ ++ + +G++G V AG + VAIKR+ + +DG ++V+ EI+L+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 313 SCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQA 372
+ HPN++ L + E M L L R + R+ ++ + Q
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPA-----MHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 373 IAH-----LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ LH + HRD+ NILL N + DF L+R
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQNDLLVAIKRIKHRDTDG-----------IQQVVNEIKLI 312
++ ++ + +G++G V AG + VAIKR+ + +DG ++V+ EI+L+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 313 SCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQA 372
+ HPN++ L + E M L L R + R+ ++ + Q
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPA-----MHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 373 IAH-----LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ LH + HRD+ NILL N + DF L+R
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHI-STAPQGTPGYLDPQYHQNFH---- 440
HRDIK N+LLD N ++ADFG S L M + + S+ GTP Y+ P+ Q
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 441 -LSDKSDVYSFGVVLVEII 458
+ D +S GV + E++
Sbjct: 273 KYGPECDWWSLGVCMYEML 291
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 41/243 (16%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR--------DTDGIQQVVNEIKLISCVSHPNL 320
LG+GA G V A + + VAIK I R + D V EI+++ ++HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVA------METAQAIA 374
+++ + + +V E M G L + + RL A + A+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLLAVQ 128
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LH I HRD+K N+LL + K+ DFG S++ + E S + T GTP YL
Sbjct: 129 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLC-GTPTYL 183
Query: 432 DPQYHQNFHLSDKS---DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
P+ + + + D +S GV+L ++ FS +V+L D+I+ G+
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL----KDQITSGKY 237
Query: 489 DEI 491
+ I
Sbjct: 238 NFI 240
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 41/243 (16%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR--------DTDGIQQVVNEIKLISCVSHPNL 320
LG+GA G V A + + VAIK I R + D V EI+++ ++HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVA------METAQAIA 374
+++ + + +V E M G L D + RL A + A+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELF--------DKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LH I HRD+K N+LL + K+ DFG S++ + E S + T GTP YL
Sbjct: 129 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLC-GTPTYL 183
Query: 432 DPQYHQNFHLSDKS---DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
P+ + + + D +S GV+L ++ FS +V+L D+I+ G+
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL----KDQITSGKY 237
Query: 489 DEI 491
+ I
Sbjct: 238 NFI 240
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 41/243 (16%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR--------DTDGIQQVVNEIKLISCVSHPNL 320
LG+GA G V A + + VAIK I R + D V EI+++ ++HP +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVA------METAQAIA 374
+++ + + +V E M G L + + RL A + A+
Sbjct: 77 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLLAVQ 127
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LH I HRD+K N+LL + K+ DFG S++ + E S + T GTP YL
Sbjct: 128 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLC-GTPTYL 182
Query: 432 DPQYHQNFHLSDKS---DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
P+ + + + D +S GV+L ++ FS +V+L D+I+ G+
Sbjct: 183 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL----KDQITSGKY 236
Query: 489 DEI 491
+ I
Sbjct: 237 NFI 239
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 41/243 (16%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR--------DTDGIQQVVNEIKLISCVSHPNL 320
LG+GA G V A + + VAIK I R + D V EI+++ ++HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVA------METAQAIA 374
+++ + + +V E M G L + + RL A + A+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLLAVQ 128
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LH I HRD+K N+LL + K+ DFG S++ + E S + T GTP YL
Sbjct: 129 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLC-GTPTYL 183
Query: 432 DPQYHQNFHLSDKS---DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
P+ + + + D +S GV+L ++ FS +V+L D+I+ G+
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL----KDQITSGKY 237
Query: 489 DEI 491
+ I
Sbjct: 238 NFI 240
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 27/212 (12%)
Query: 264 FSEKQRLGTGAFGTVYAGKLQND-LLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVR 322
F ++ G G FGTV GK ++ + VAIK++ +D + + ++ ++ + HPN+V+
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVI-QDPRFRNRELQIMQDLAVLHHPNIVQ 83
Query: 323 LLGCSIERGEQI-------LVYEFMPNGTL---CQHLQRERGDGLSWPIRLTVAM-ETAQ 371
L GE+ +V E++P+ TL C++ R + PI + V + + +
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQ--VAPPPILIKVFLFQLIR 140
Query: 372 AIAHLH-SAINPPIYHRDIKSSNILL-DYNFKSKVADFG-LSRLGMTE--ISHISTAPQG 426
+I LH ++N + HRDIK N+L+ + + K+ DFG +L +E +++I +
Sbjct: 141 SIGCLHLPSVN--VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYR 198
Query: 427 TPGYLDPQYHQNFHLSDKSDVYSFGVVLVEII 458
P + N H + D++S G + E++
Sbjct: 199 APELI----FGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 270 LGTGAFGTVYAGK-LQNDLLVAIKRIKHRDTDGIQQVVNEIKLISCVSHPNLVRLLGCSI 328
+G+G FG + Q++ LVA+K I+ R + V EI + HPN+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 329 ERGEQILVYEFMPNGTLCQHL---QRERGDGLSWPIRLTVAMETAQAIAHLHSAINPPIY 385
+V E+ G L + + R D + + ++ +++ H+ +
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYCHAM---QVC 137
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLDPQYHQNFHLS 442
HRD+K N LLD S + G ++ S + + P+ GTP Y+ P+
Sbjct: 138 HRDLKLENTLLD---GSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 443 DK-SDVYSFGVVL-VEIITALKVVDFSRPPN 471
K +DV+S GV L V ++ A D P N
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 45/230 (19%)
Query: 270 LGTGAFGTVYAG--KLQNDLLVAIKRIKHRDTDGI--QQVVNEIKLISCVSHPNLVRLLG 325
+GTG++G V KL+ + VAIK+I D I ++++ EI +++ ++H ++V++L
Sbjct: 61 IGTGSYGHVCEAYDKLEKRV-VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 326 CSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLT------VAMETAQAIAHLHSA 379
I + V +F + + + P+ LT + + ++HSA
Sbjct: 120 IVIPKD----VEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA 175
Query: 380 INPPIYHRDIKSSNILLDYNFKSKVADFGLSR--------------------LGMTEISH 419
I HRD+K +N L++ + KV DFGL+R + + H
Sbjct: 176 ---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 420 ISTAPQGTPGYLDPQYHQNFHL-------SDKSDVYSFGVVLVEIITALK 462
+ G++ ++++ L ++ DV+S G + E++ +K
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 264 FSEKQRLGTGAFGTVYAGK-LQNDLLVAIKRI-KHRDTDGIQ-QVVNEIKLISCVSHPNL 320
+ + ++G G FG V+ + + VA+K++ + +G + EIK++ + H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 321 VRLLG-CSIE-------RGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQA 372
V L+ C + +G LV++F C+H + L+ Q
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDF------CEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 373 IAH-LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ + L+ I HRD+K++N+L+ + K+ADFGL+R
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDK 444
HRD+ + NILL K+ DFGL+R + ++ P ++ P+ + + +
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 273
Query: 445 SDVYSFGVVLVEIIT 459
SDV+SFGV+L EI +
Sbjct: 274 SDVWSFGVLLWEIFS 288
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 264 FSEKQRLGTGAFGTVYAGK-LQNDLLVAIKRI-KHRDTDGIQ-QVVNEIKLISCVSHPNL 320
+ + ++G G FG V+ + + VA+K++ + +G + EIK++ + H N+
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 321 VRLLG-CSIE-------RGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQA 372
V L+ C + +G LV++F C+H + L+ Q
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDF------CEHDLAGLLSNVLVKFTLSEIKRVMQM 132
Query: 373 IAH-LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ + L+ I HRD+K++N+L+ + K+ADFGL+R
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDK 444
HRD+ + NILL K+ DFGL+R + ++ P ++ P+ + + +
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 275
Query: 445 SDVYSFGVVLVEIIT 459
SDV+SFGV+L EI +
Sbjct: 276 SDVWSFGVLLWEIFS 290
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 41/243 (16%)
Query: 270 LGTGAFGTV-YAGKLQNDLLVAIKRIKHR--------DTDGIQQVVNEIKLISCVSHPNL 320
LG+GA G V A + + VAI+ I R + D V EI+++ ++HP +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 321 VRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVA------METAQAIA 374
+++ + + +V E M G L + + RL A + A+
Sbjct: 203 IKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLLAVQ 253
Query: 375 HLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPGYL 431
+LH I HRD+K N+LL + K+ DFG S++ + E S + T GTP YL
Sbjct: 254 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTL-CGTPTYL 308
Query: 432 DPQYHQNFHLSDKS---DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKGRL 488
P+ + + + D +S GV+L ++ FS +V+L D+I+ G+
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL----KDQITSGKY 362
Query: 489 DEI 491
+ I
Sbjct: 363 NFI 365
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 264 FSEKQRLGTGAFGTVYAGK-LQNDLLVAIKRI-KHRDTDGIQ-QVVNEIKLISCVSHPNL 320
+ + ++G G FG V+ + + VA+K++ + +G + EIK++ + H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 321 VRLLG-CSIE-------RGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMETAQA 372
V L+ C + +G LV++F C+H + L+ Q
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDF------CEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 373 IAH-LHSAINPPIYHRDIKSSNILLDYNFKSKVADFGLSR 411
+ + L+ I HRD+K++N+L+ + K+ADFGL+R
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDK 444
HRD+ + NILL K+ DFGL+R + ++ P ++ P+ + + +
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 280
Query: 445 SDVYSFGVVLVEIIT 459
SDV+SFGV+L EI +
Sbjct: 281 SDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 386 HRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQGTP-GYLDPQYHQNFHLSDK 444
HRD+ + NILL K+ DFGL+R + ++ P ++ P+ + + +
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 282
Query: 445 SDVYSFGVVLVEIIT 459
SDV+SFGV+L EI +
Sbjct: 283 SDVWSFGVLLWEIFS 297
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 41/245 (16%)
Query: 268 QRLGTGAFGTV-YAGKLQNDLLVAIKRIKHR--------DTDGIQQVVNEIKLISCVSHP 318
+ LG+GA G V A + + VAI+ I R + D V EI+++ ++HP
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 319 NLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVA------METAQA 372
++++ + + +V E M G L + + RL A + A
Sbjct: 215 CIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLLA 265
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDYNFKS---KVADFGLSRLGMTEISHISTAPQGTPG 429
+ +LH I HRD+K N+LL + K+ DFG S++ + E S + T GTP
Sbjct: 266 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLC-GTPT 320
Query: 430 YLDPQYHQNFHLSDKS---DVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISKG 486
YL P+ + + + D +S GV+L ++ FS +V+L D+I+ G
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL----KDQITSG 374
Query: 487 RLDEI 491
+ + I
Sbjct: 375 KYNFI 379
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 318 PNLVRLLGC--SIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET-AQA 372
P++VR++ ++ G + ++V E + G L +Q +RGD + M++ +A
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA 127
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDY---NFKSKVADFGLSRLGMTEISHIS-TAPQGTP 428
I +LHS IN I HRD+K N+L N K+ DFG ++ SH S T P TP
Sbjct: 128 IQYLHS-IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTP 181
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVL 454
Y+ P+ D++S GV++
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 318 PNLVRLLGC--SIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET-AQA 372
P++VR++ ++ G + ++V E + G L +Q +RGD + M++ +A
Sbjct: 85 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA 143
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDY---NFKSKVADFGLSRLGMTEISHIS-TAPQGTP 428
I +LHS IN I HRD+K N+L N K+ DFG ++ SH S T P TP
Sbjct: 144 IQYLHS-IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTP 197
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVL 454
Y+ P+ D++S GV++
Sbjct: 198 YYVAPEVLGPEKYDKSCDMWSLGVIM 223
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 318 PNLVRLLGC--SIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET-AQA 372
P++VR++ ++ G + ++V E + G L +Q +RGD + M++ +A
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA 129
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDY---NFKSKVADFGLSRLGMTEISHIS-TAPQGTP 428
I +LHS IN I HRD+K N+L N K+ DFG ++ SH S T P TP
Sbjct: 130 IQYLHS-IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTP 183
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVL 454
Y+ P+ D++S GV++
Sbjct: 184 YYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 318 PNLVRLLGC--SIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET-AQA 372
P++VR++ ++ G + ++V E + G L +Q +RGD + M++ +A
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA 179
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDY---NFKSKVADFGLSRLGMTEISHIS-TAPQGTP 428
I +LHS IN I HRD+K N+L N K+ DFG ++ SH S T P TP
Sbjct: 180 IQYLHS-IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTP 233
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVL 454
Y+ P+ D++S GV++
Sbjct: 234 YYVAPEVLGPEKYDKSCDMWSLGVIM 259
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 318 PNLVRLLGC--SIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET-AQA 372
P++VR++ ++ G + ++V E + G L +Q +RGD + M++ +A
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA 173
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDY---NFKSKVADFGLSRLGMTEISHIS-TAPQGTP 428
I +LHS IN I HRD+K N+L N K+ DFG ++ SH S T P TP
Sbjct: 174 IQYLHS-IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTP 227
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVL 454
Y+ P+ D++S GV++
Sbjct: 228 YYVAPEVLGPEKYDKSCDMWSLGVIM 253
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 318 PNLVRLLGC--SIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET-AQA 372
P++VR++ ++ G + ++V E + G L +Q +RGD + M++ +A
Sbjct: 70 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA 128
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDY---NFKSKVADFGLSRLGMTEISHIS-TAPQGTP 428
I +LHS IN I HRD+K N+L N K+ DFG ++ SH S T P TP
Sbjct: 129 IQYLHS-IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTP 182
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVL 454
Y+ P+ D++S GV++
Sbjct: 183 YYVAPEVLGPEKYDKSCDMWSLGVIM 208
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 318 PNLVRLLGC--SIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET-AQA 372
P++VR++ ++ G + ++V E + G L +Q +RGD + M++ +A
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA 129
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDY---NFKSKVADFGLSRLGMTEISHIS-TAPQGTP 428
I +LHS IN I HRD+K N+L N K+ DFG ++ SH S T P TP
Sbjct: 130 IQYLHS-IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTP 183
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVL 454
Y+ P+ D++S GV++
Sbjct: 184 YYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 318 PNLVRLLGC--SIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET-AQA 372
P++VR++ ++ G + ++V E + G L +Q +RGD + M++ +A
Sbjct: 77 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA 135
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDY---NFKSKVADFGLSRLGMTEISHIS-TAPQGTP 428
I +LHS IN I HRD+K N+L N K+ DFG ++ SH S T P TP
Sbjct: 136 IQYLHS-IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTP 189
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVL 454
Y+ P+ D++S GV++
Sbjct: 190 YYVAPEVLGPEKYDKSCDMWSLGVIM 215
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 318 PNLVRLLGC--SIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET-AQA 372
P++VR++ ++ G + ++V E + G L +Q +RGD + M++ +A
Sbjct: 75 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA 133
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDY---NFKSKVADFGLSRLGMTEISHIS-TAPQGTP 428
I +LHS IN I HRD+K N+L N K+ DFG ++ SH S T P TP
Sbjct: 134 IQYLHS-IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTP 187
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVL 454
Y+ P+ D++S GV++
Sbjct: 188 YYVAPEVLGPEKYDKSCDMWSLGVIM 213
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 318 PNLVRLLGC--SIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET-AQA 372
P++VR++ ++ G + ++V E + G L +Q +RGD + M++ +A
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA 127
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDY---NFKSKVADFGLSRLGMTEISHIS-TAPQGTP 428
I +LHS IN I HRD+K N+L N K+ DFG ++ SH S T P TP
Sbjct: 128 IQYLHS-IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTP 181
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVL 454
Y+ P+ D++S GV++
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 318 PNLVRLLGC--SIERGEQ--ILVYEFMPNGTLCQHLQRERGDGLSWPIRLTVAMET-AQA 372
P++VR++ ++ G + ++V E + G L +Q +RGD + M++ +A
Sbjct: 76 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEA 134
Query: 373 IAHLHSAINPPIYHRDIKSSNILLDY---NFKSKVADFGLSRLGMTEISHIS-TAPQGTP 428
I +LHS IN I HRD+K N+L N K+ DFG ++ SH S T P TP
Sbjct: 135 IQYLHS-IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTP 188
Query: 429 GYLDPQYHQNFHLSDKSDVYSFGVVL 454
Y+ P+ D++S GV++
Sbjct: 189 YYVAPEVLGPEKYDKSCDMWSLGVIM 214
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLDPQYHQNFH 440
+ HRD+K N+ L+ + + K+ DFGL+ T++ + + GTP Y+ P+
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKVLCGTPNYIAPEVLSKKG 191
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
S + DV+S G ++ ++ +PP E + RI K
Sbjct: 192 HSFEVDVWSIGCIMYTLLVG-------KPPFETSCLKETYLRIKK 229
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 20/250 (8%)
Query: 245 GISNIPIYPYREIEKATIGFSEKQRLGTGAFGTVY--AGKLQNDLLVAIKRIKHRDTDGI 302
G+ +I +R + T G+ K+ +G G++ K N A+K I D
Sbjct: 5 GVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEF-AVKIIDKSKRDPT 63
Query: 303 QQVVNEIKLISCVSHPNLVRLLGCSIERGEQILVYEFMPNGTLCQHLQRERGDGLSWPIR 362
+++ EI L+ HPN++ L + +V E G L + R++ S
Sbjct: 64 EEI--EI-LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF--FSEREA 118
Query: 363 LTVAMETAQAIAHLHSAINPPIYHRDIKSSNILL---DYNFKS-KVADFGLSRLGMTEIS 418
V + + +LH+ + HRD+K SNIL N +S ++ DFG ++ E
Sbjct: 119 SAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175
Query: 419 HISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAAL 478
+ T P T ++ P+ + D++S GV+L +T F+ P++ L
Sbjct: 176 LLXT-PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGY--TPFANGPDDTPEEIL 232
Query: 479 AADRISKGRL 488
A RI G+
Sbjct: 233 A--RIGSGKF 240
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLDPQYHQNFH 440
+ HRD+K N+ L+ + + K+ DFGL+ T++ + + GTP Y+ P+
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
S + DV+S G ++ ++ +PP E + RI K
Sbjct: 194 HSFEVDVWSIGCIMYTLLVG-------KPPFETSCLKETYLRIKK 231
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLDPQYHQNFH 440
+ HRD+K N+ L+ + + K+ DFGL+ T++ + + GTP Y+ P+
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
S + DV+S G ++ ++ +PP E + RI K
Sbjct: 194 HSFEVDVWSIGCIMYTLLVG-------KPPFETSCLKETYLRIKK 231
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLDPQYHQNFH 440
+ HRD+K N+ L+ + + K+ DFGL+ T++ + + GTP Y+ P+
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKTLCGTPNYIAPEVLSKKG 197
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
S + DV+S G ++ ++ +PP E + RI K
Sbjct: 198 HSFEVDVWSIGCIMYTLLVG-------KPPFETSCLKETYLRIKK 235
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLDPQYHQNFH 440
+ HRD+K N+ L+ + + K+ DFGL+ T++ + + GTP Y+ P+
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKVLCGTPNYIAPEVLSKKG 215
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
S + DV+S G ++ ++ +PP E + RI K
Sbjct: 216 HSFEVDVWSIGCIMYTLLVG-------KPPFETSCLKETYLRIKK 253
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 384 IYHRDIKSSNILLDYNFKSKVADFGLSRLGMTEISHISTAPQ---GTPGYLDPQYHQNFH 440
+ HRD+K N+ L+ + + K+ DFGL+ T++ + + GTP Y+ P+
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKVLCGTPNYIAPEVLSKKG 217
Query: 441 LSDKSDVYSFGVVLVEIITALKVVDFSRPPNEVNLAALAADRISK 485
S + DV+S G ++ ++ +PP E + RI K
Sbjct: 218 HSFEVDVWSIGCIMYTLLVG-------KPPFETSCLKETYLRIKK 255
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,272,973
Number of Sequences: 62578
Number of extensions: 590400
Number of successful extensions: 3721
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 296
Number of HSP's that attempted gapping in prelim test: 1509
Number of HSP's gapped (non-prelim): 1116
length of query: 603
length of database: 14,973,337
effective HSP length: 104
effective length of query: 499
effective length of database: 8,465,225
effective search space: 4224147275
effective search space used: 4224147275
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)