Query 007454
Match_columns 603
No_of_seqs 267 out of 1325
Neff 6.8
Searched_HMMs 46136
Date Thu Mar 28 23:49:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007454.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007454hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02724 Molybdenum cofactor s 100.0 1.3E-63 2.8E-68 581.8 37.4 420 78-580 2-485 (805)
2 COG0520 csdA Selenocysteine ly 100.0 3.7E-59 8E-64 504.1 34.5 365 92-582 4-404 (405)
3 COG1104 NifS Cysteine sulfinat 100.0 1.1E-58 2.4E-63 486.4 33.3 345 109-584 2-378 (386)
4 KOG2142 Molybdenum cofactor su 100.0 7.2E-58 1.6E-62 492.0 14.8 518 45-594 66-719 (728)
5 PRK09295 bifunctional cysteine 100.0 7.4E-47 1.6E-51 409.7 35.7 362 92-581 4-402 (406)
6 KOG1549 Cysteine desulfurase N 100.0 9.3E-46 2E-50 390.0 27.4 353 107-592 42-427 (428)
7 PLN02651 cysteine desulfurase 100.0 1.5E-44 3.3E-49 386.2 33.2 332 110-571 1-364 (364)
8 PLN02855 Bifunctional selenocy 100.0 3.5E-44 7.6E-49 391.1 35.7 363 95-583 16-418 (424)
9 TIGR03402 FeS_nifS cysteine de 100.0 2.4E-43 5.3E-48 378.3 36.8 342 110-583 1-372 (379)
10 PF00266 Aminotran_5: Aminotra 100.0 8.8E-45 1.9E-49 388.6 25.3 338 110-573 1-371 (371)
11 TIGR03392 FeS_syn_CsdA cystein 100.0 2.7E-43 5.8E-48 380.6 35.6 361 92-583 2-395 (398)
12 PRK10874 cysteine sulfinate de 100.0 1.3E-42 2.8E-47 375.6 36.4 361 92-583 5-398 (401)
13 TIGR03403 nifS_epsilon cystein 100.0 6.2E-42 1.3E-46 368.0 36.5 342 110-583 1-375 (382)
14 TIGR01979 sufS cysteine desulf 100.0 6.3E-41 1.4E-45 362.3 35.4 361 95-582 2-400 (403)
15 TIGR02006 IscS cysteine desulf 100.0 2.4E-40 5.2E-45 358.6 36.7 344 107-583 2-377 (402)
16 PRK02948 cysteine desulfurase; 100.0 1.7E-38 3.8E-43 341.0 36.7 345 109-584 1-375 (381)
17 TIGR01814 kynureninase kynuren 100.0 2.2E-38 4.8E-43 343.7 33.7 358 92-582 9-406 (406)
18 TIGR01976 am_tr_V_VC1184 cyste 100.0 3.1E-37 6.7E-42 332.6 33.9 351 93-577 3-397 (397)
19 PRK14012 cysteine desulfurase; 100.0 4.4E-35 9.6E-40 317.6 37.1 345 108-584 3-380 (404)
20 TIGR01977 am_tr_V_EF2568 cyste 100.0 7.4E-35 1.6E-39 311.5 33.2 345 110-579 1-375 (376)
21 TIGR03235 DNA_S_dndA cysteine 100.0 1.3E-34 2.9E-39 307.8 31.5 319 111-561 1-353 (353)
22 cd06453 SufS_like Cysteine des 100.0 3.3E-33 7.2E-38 298.6 32.3 340 110-577 1-373 (373)
23 PRK03080 phosphoserine aminotr 100.0 1.9E-32 4.1E-37 295.0 27.3 340 101-583 6-373 (378)
24 cd00611 PSAT_like Phosphoserin 100.0 4.9E-32 1.1E-36 289.4 20.9 315 114-580 4-353 (355)
25 PLN02409 serine--glyoxylate am 100.0 1.1E-28 2.5E-33 267.6 29.9 334 107-583 7-372 (401)
26 PRK05355 3-phosphoserine/phosp 100.0 9.6E-29 2.1E-33 264.6 24.3 324 110-582 4-357 (360)
27 PTZ00094 serine hydroxymethylt 100.0 4.9E-28 1.1E-32 266.6 30.2 324 115-584 41-409 (452)
28 TIGR01364 serC_1 phosphoserine 100.0 2.2E-27 4.8E-32 253.0 25.6 311 118-582 1-347 (349)
29 TIGR01788 Glu-decarb-GAD gluta 100.0 3.2E-26 6.9E-31 249.9 33.0 332 107-583 32-429 (431)
30 cd06451 AGAT_like Alanine-glyo 100.0 3.9E-26 8.4E-31 242.6 31.0 322 114-581 4-355 (356)
31 TIGR01366 serC_3 phosphoserine 99.9 1.2E-26 2.5E-31 248.6 23.2 291 167-583 38-360 (361)
32 TIGR02326 transamin_PhnW 2-ami 99.9 7.9E-25 1.7E-29 233.7 30.0 300 168-582 33-361 (363)
33 PRK02769 histidine decarboxyla 99.9 1.7E-24 3.7E-29 233.1 29.3 314 103-581 17-370 (380)
34 PRK13479 2-aminoethylphosphona 99.9 4.2E-23 9.1E-28 220.7 30.4 300 169-583 36-363 (368)
35 PRK13520 L-tyrosine decarboxyl 99.9 1.6E-22 3.5E-27 215.7 30.5 312 111-582 24-370 (371)
36 PRK05937 8-amino-7-oxononanoat 99.9 1.6E-22 3.5E-27 217.1 26.5 311 107-583 10-350 (370)
37 KOG2142 Molybdenum cofactor su 99.9 2.6E-25 5.6E-30 241.0 2.6 371 97-579 14-427 (728)
38 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.1E-21 2.4E-26 207.4 28.8 297 169-581 30-355 (355)
39 TIGR03812 tyr_de_CO2_Arch tyro 99.9 5.1E-21 1.1E-25 204.5 33.1 310 110-579 23-372 (373)
40 PLN03032 serine decarboxylase; 99.9 4.2E-21 9.2E-26 205.9 29.5 194 107-327 22-254 (374)
41 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 3.5E-20 7.5E-25 200.3 32.5 194 110-329 21-242 (387)
42 PLN02414 glycine dehydrogenase 99.9 2.6E-20 5.7E-25 218.5 30.8 302 169-591 567-916 (993)
43 PLN02414 glycine dehydrogenase 99.9 1E-19 2.2E-24 213.7 29.0 332 101-579 94-465 (993)
44 cd00613 GDC-P Glycine cleavage 99.9 2.6E-19 5.6E-24 193.2 29.3 300 169-577 63-398 (398)
45 PRK04366 glycine dehydrogenase 99.8 1.1E-18 2.4E-23 193.8 31.1 295 169-585 112-450 (481)
46 cd06450 DOPA_deC_like DOPA dec 99.8 4.8E-19 1E-23 187.1 23.2 264 167-579 35-344 (345)
47 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 8.2E-18 1.8E-22 179.8 31.6 188 117-329 10-223 (361)
48 TIGR01822 2am3keto_CoA 2-amino 99.8 2.3E-18 5E-23 185.6 27.3 325 109-583 38-389 (393)
49 PLN02452 phosphoserine transam 99.8 3.5E-18 7.6E-23 183.1 26.0 323 108-583 6-363 (365)
50 COG3844 Kynureninase [Amino ac 99.8 1.7E-17 3.7E-22 168.8 28.5 358 92-584 18-403 (407)
51 PLN03226 serine hydroxymethylt 99.8 1.9E-17 4E-22 183.3 29.8 335 115-583 41-419 (475)
52 TIGR01437 selA_rel uncharacter 99.8 1.6E-17 3.4E-22 178.4 28.2 298 113-581 18-363 (363)
53 PRK05367 glycine dehydrogenase 99.8 1.4E-17 2.9E-22 196.4 28.1 283 169-578 120-437 (954)
54 PRK07179 hypothetical protein; 99.8 1E-17 2.3E-22 182.0 24.9 223 225-583 168-398 (407)
55 COG0075 Serine-pyruvate aminot 99.8 1.1E-16 2.3E-21 170.5 31.0 331 114-586 10-366 (383)
56 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 1.4E-16 3.1E-21 171.1 32.0 157 170-330 51-231 (370)
57 TIGR03799 NOD_PanD_pyr putativ 99.8 3.7E-17 8.1E-22 182.5 27.8 206 194-487 217-439 (522)
58 PRK00451 glycine dehydrogenase 99.8 4E-17 8.6E-22 179.5 26.3 301 169-581 111-446 (447)
59 cd06454 KBL_like KBL_like; thi 99.8 4.6E-17 9.9E-22 172.0 24.5 276 169-580 45-348 (349)
60 cd00378 SHMT Serine-glycine hy 99.8 1.8E-16 4E-21 171.5 27.8 325 114-585 25-387 (402)
61 PRK00011 glyA serine hydroxyme 99.8 2.3E-16 5E-21 171.8 28.0 327 109-583 27-389 (416)
62 PRK13580 serine hydroxymethylt 99.8 5E-16 1.1E-20 170.4 29.4 321 115-583 56-445 (493)
63 PRK08064 cystathionine beta-ly 99.8 2.7E-17 5.9E-22 178.1 18.6 149 164-329 48-224 (390)
64 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.7E-16 3.6E-21 168.1 24.2 305 170-578 18-352 (352)
65 PRK12566 glycine dehydrogenase 99.7 6.3E-17 1.4E-21 187.2 22.5 270 206-592 608-886 (954)
66 PRK05367 glycine dehydrogenase 99.7 9.5E-15 2.1E-19 172.5 37.8 268 205-592 606-885 (954)
67 PLN02880 tyrosine decarboxylas 99.7 1.2E-15 2.7E-20 169.6 27.8 274 199-586 191-487 (490)
68 TIGR00858 bioF 8-amino-7-oxono 99.7 1.6E-15 3.5E-20 160.5 26.1 320 107-578 14-360 (360)
69 PRK05958 8-amino-7-oxononanoat 99.7 3.9E-15 8.4E-20 159.4 25.9 322 107-581 37-385 (385)
70 PLN02483 serine palmitoyltrans 99.7 2.5E-14 5.5E-19 159.3 29.5 285 169-586 145-469 (489)
71 PRK06939 2-amino-3-ketobutyrat 99.7 4.4E-14 9.6E-19 152.0 27.5 285 170-584 87-394 (397)
72 PLN02271 serine hydroxymethylt 99.6 8.8E-14 1.9E-18 153.6 28.7 340 115-583 155-540 (586)
73 PRK13034 serine hydroxymethylt 99.6 1.1E-13 2.5E-18 151.2 29.6 321 115-582 35-391 (416)
74 TIGR01825 gly_Cac_T_rel pyrido 99.6 6.1E-14 1.3E-18 150.7 25.9 281 169-583 77-381 (385)
75 TIGR01141 hisC histidinol-phos 99.6 2.2E-14 4.8E-19 152.0 21.5 258 173-577 57-345 (346)
76 TIGR01329 cysta_beta_ly_E cyst 99.6 6E-15 1.3E-19 159.2 17.3 137 171-324 48-211 (378)
77 PRK09064 5-aminolevulinate syn 99.6 6.5E-14 1.4E-18 152.1 25.5 280 169-583 90-397 (407)
78 PRK06225 aspartate aminotransf 99.6 1.3E-13 2.8E-18 148.4 27.1 147 172-329 68-248 (380)
79 cd00609 AAT_like Aspartate ami 99.6 4.6E-14 1E-18 147.9 22.0 241 203-578 97-349 (350)
80 PLN02721 threonine aldolase 99.6 8.4E-14 1.8E-18 147.5 22.0 119 205-326 99-226 (353)
81 PRK08134 O-acetylhomoserine am 99.6 5.4E-13 1.2E-17 146.4 28.6 135 170-322 64-226 (433)
82 KOG3846 L-kynurenine hydrolase 99.6 1.3E-12 2.8E-17 132.3 26.6 256 225-583 199-461 (465)
83 TIGR01821 5aminolev_synth 5-am 99.6 4.4E-13 9.6E-18 145.5 24.6 275 170-583 90-396 (402)
84 TIGR03588 PseC UDP-4-keto-6-de 99.6 4.2E-13 9.2E-18 144.6 24.0 319 172-581 31-380 (380)
85 TIGR00461 gcvP glycine dehydro 99.6 8.3E-13 1.8E-17 154.2 27.6 121 205-335 594-720 (939)
86 KOG2862 Alanine-glyoxylate ami 99.6 4.6E-13 1E-17 135.9 22.1 268 202-583 107-382 (385)
87 PLN02822 serine palmitoyltrans 99.6 2.4E-12 5.3E-17 143.2 30.1 287 169-583 153-477 (481)
88 PRK13393 5-aminolevulinate syn 99.6 1.5E-12 3.3E-17 141.6 27.9 275 170-583 90-396 (406)
89 PRK00950 histidinol-phosphate 99.6 1.2E-12 2.6E-17 139.6 26.5 203 82-325 11-242 (361)
90 PRK07908 hypothetical protein; 99.6 3.8E-13 8.2E-18 143.2 22.5 262 172-583 60-347 (349)
91 PLN02590 probable tyrosine dec 99.5 9.2E-12 2E-16 139.5 33.6 124 199-323 239-371 (539)
92 PRK13392 5-aminolevulinate syn 99.5 1.3E-12 2.8E-17 142.2 25.5 283 172-595 93-407 (410)
93 PRK12462 phosphoserine aminotr 99.5 8.7E-13 1.9E-17 140.9 23.3 323 111-582 6-361 (364)
94 TIGR00474 selA seryl-tRNA(sec) 99.5 3.5E-13 7.5E-18 148.4 17.2 189 107-330 80-310 (454)
95 PLN02263 serine decarboxylase 99.5 4.9E-11 1.1E-15 130.9 32.5 204 93-325 79-319 (470)
96 PRK05968 hypothetical protein; 99.5 3.1E-12 6.7E-17 138.7 22.5 141 170-328 63-231 (389)
97 PRK02731 histidinol-phosphate 99.5 4.5E-12 9.8E-17 135.6 22.4 264 173-583 70-366 (367)
98 cd06502 TA_like Low-specificit 99.5 1.8E-12 3.8E-17 136.6 18.7 150 170-329 32-217 (338)
99 PRK05957 aspartate aminotransf 99.5 1.7E-11 3.7E-16 132.6 26.5 192 107-329 27-256 (389)
100 PRK06108 aspartate aminotransf 99.5 1.4E-11 3E-16 132.3 25.1 246 204-582 123-381 (382)
101 PRK04870 histidinol-phosphate 99.5 2.1E-11 4.5E-16 130.1 26.0 302 107-581 26-356 (356)
102 PRK05613 O-acetylhomoserine am 99.4 2.6E-11 5.6E-16 133.3 26.0 140 168-322 67-232 (437)
103 TIGR01365 serC_2 phosphoserine 99.4 1.2E-11 2.7E-16 133.1 23.0 293 167-578 36-368 (374)
104 PRK09105 putative aminotransfe 99.4 2.4E-11 5.2E-16 130.8 25.3 183 107-329 43-256 (370)
105 PRK05387 histidinol-phosphate 99.4 2.6E-11 5.6E-16 128.9 25.2 180 107-328 24-232 (353)
106 cd00615 Orn_deC_like Ornithine 99.4 1.4E-12 3.1E-17 135.9 13.8 146 169-323 58-236 (294)
107 PRK04311 selenocysteine syntha 99.4 3.2E-12 7E-17 141.1 16.9 187 107-329 85-314 (464)
108 PRK08114 cystathionine beta-ly 99.4 2.4E-11 5.2E-16 131.7 22.3 131 177-324 92-229 (395)
109 cd01494 AAT_I Aspartate aminot 99.4 4.5E-12 9.8E-17 118.6 14.7 108 204-321 57-170 (170)
110 PRK08056 threonine-phosphate d 99.4 3.7E-11 8E-16 128.4 23.3 140 172-321 57-227 (356)
111 PRK11658 UDP-4-amino-4-deoxy-L 99.4 4.2E-11 9E-16 129.4 23.7 285 204-581 88-377 (379)
112 cd00610 OAT_like Acetyl ornith 99.4 2E-10 4.3E-15 124.5 29.0 318 107-581 34-413 (413)
113 PRK14807 histidinol-phosphate 99.4 1.7E-10 3.7E-15 123.1 27.9 181 109-325 24-232 (351)
114 PRK04635 histidinol-phosphate 99.4 2.3E-11 5E-16 129.9 21.3 145 173-329 63-237 (354)
115 PRK05764 aspartate aminotransf 99.4 4.3E-11 9.3E-16 129.2 23.5 148 173-328 71-260 (393)
116 PRK07504 O-succinylhomoserine 99.4 1.1E-10 2.3E-15 127.2 25.9 102 207-323 126-229 (398)
117 PRK08361 aspartate aminotransf 99.4 2.1E-11 4.5E-16 132.0 20.2 144 174-326 74-257 (391)
118 PRK07812 O-acetylhomoserine am 99.4 2.2E-10 4.7E-15 126.0 27.0 103 206-324 129-234 (436)
119 cd00614 CGS_like CGS_like: Cys 99.4 9.5E-11 2.1E-15 126.2 23.6 143 169-328 39-210 (369)
120 PRK07582 cystathionine gamma-l 99.4 5E-11 1.1E-15 128.3 20.8 75 243-321 132-209 (366)
121 PLN03227 serine palmitoyltrans 99.4 4.9E-10 1.1E-14 121.7 28.5 293 171-584 44-383 (392)
122 TIGR01324 cysta_beta_ly_B cyst 99.3 2.2E-11 4.9E-16 131.5 16.6 104 206-325 110-216 (377)
123 PLN03026 histidinol-phosphate 99.3 1E-09 2.2E-14 118.6 29.4 143 173-325 89-259 (380)
124 PRK08133 O-succinylhomoserine 99.3 9.8E-11 2.1E-15 127.1 20.7 138 169-324 60-226 (390)
125 PRK08960 hypothetical protein; 99.3 5E-10 1.1E-14 121.0 26.1 195 96-328 24-256 (387)
126 COG0076 GadB Glutamate decarbo 99.3 7.1E-10 1.5E-14 122.3 27.5 118 199-323 167-292 (460)
127 PRK03244 argD acetylornithine 99.3 1.8E-09 4E-14 117.0 30.3 268 173-583 88-394 (398)
128 PRK06460 hypothetical protein; 99.3 3.5E-10 7.6E-15 122.2 24.4 147 162-325 37-211 (376)
129 PRK00854 rocD ornithine--oxo-a 99.3 2.4E-09 5.3E-14 116.1 31.0 215 226-582 176-400 (401)
130 PRK08912 hypothetical protein; 99.3 3.7E-10 8E-15 122.0 24.0 118 203-328 125-254 (387)
131 PRK05994 O-acetylhomoserine am 99.3 1.7E-09 3.7E-14 118.8 29.3 104 204-323 121-226 (427)
132 PRK04073 rocD ornithine--oxo-a 99.3 1.6E-09 3.5E-14 117.6 28.5 213 226-581 175-395 (396)
133 PRK08861 cystathionine gamma-s 99.3 5.2E-10 1.1E-14 121.3 24.4 99 208-322 115-216 (388)
134 PRK06767 methionine gamma-lyas 99.3 1.1E-10 2.3E-15 126.6 19.0 143 173-326 64-228 (386)
135 PRK08776 cystathionine gamma-s 99.3 1E-09 2.2E-14 119.7 26.0 135 171-322 61-223 (405)
136 PRK03158 histidinol-phosphate 99.3 3.7E-10 8.1E-15 120.5 22.1 147 172-328 66-244 (359)
137 PRK07503 methionine gamma-lyas 99.3 2E-10 4.4E-15 125.2 20.3 141 171-328 66-234 (403)
138 PRK08248 O-acetylhomoserine am 99.3 2.4E-09 5.1E-14 117.8 28.5 105 202-323 120-227 (431)
139 PRK07505 hypothetical protein; 99.3 2.2E-09 4.8E-14 116.7 27.8 183 107-320 44-262 (402)
140 PRK07811 cystathionine gamma-s 99.3 5.7E-10 1.2E-14 121.1 22.8 143 170-323 61-225 (388)
141 PRK08249 cystathionine gamma-s 99.3 6.9E-10 1.5E-14 120.8 23.3 131 164-310 58-214 (398)
142 PRK08045 cystathionine gamma-s 99.3 6.3E-10 1.4E-14 120.6 22.6 87 225-321 125-214 (386)
143 TIGR01328 met_gam_lyase methio 99.3 7.9E-10 1.7E-14 120.1 23.1 105 206-326 119-226 (391)
144 PRK05939 hypothetical protein; 99.2 1E-09 2.3E-14 119.4 23.7 104 204-322 104-208 (397)
145 PRK07681 aspartate aminotransf 99.2 1E-09 2.2E-14 119.1 23.4 148 173-328 72-261 (399)
146 PRK08574 cystathionine gamma-s 99.2 8E-10 1.7E-14 119.8 22.3 135 170-321 53-214 (385)
147 PLN02509 cystathionine beta-ly 99.2 6.1E-10 1.3E-14 123.1 21.6 105 204-324 190-297 (464)
148 PF00282 Pyridoxal_deC: Pyrido 99.2 1.1E-09 2.4E-14 118.2 22.9 124 199-324 151-279 (373)
149 PRK09028 cystathionine beta-ly 99.2 6E-10 1.3E-14 121.0 20.8 91 205-310 120-211 (394)
150 TIGR00461 gcvP glycine dehydro 99.2 3E-09 6.5E-14 124.8 27.8 222 247-578 196-426 (939)
151 TIGR01140 L_thr_O3P_dcar L-thr 99.2 8.4E-10 1.8E-14 116.8 21.2 144 173-329 50-217 (330)
152 PRK06084 O-acetylhomoserine am 99.2 6E-09 1.3E-13 114.4 28.4 88 226-322 132-220 (425)
153 TIGR03540 DapC_direct LL-diami 99.2 1.2E-09 2.5E-14 117.8 22.4 113 204-326 130-257 (383)
154 PTZ00125 ornithine aminotransf 99.2 1.3E-08 2.8E-13 110.3 30.4 221 226-583 166-395 (400)
155 PRK07337 aminotransferase; Val 99.2 2E-09 4.3E-14 116.4 23.7 187 107-328 30-254 (388)
156 PRK07550 hypothetical protein; 99.2 1.9E-09 4.2E-14 116.4 23.5 118 205-328 130-258 (386)
157 PRK08363 alanine aminotransfer 99.2 1.8E-09 4E-14 117.1 23.1 141 173-320 73-251 (398)
158 TIGR03537 DapC succinyldiamino 99.2 1.4E-09 3.1E-14 115.9 21.5 112 204-325 102-225 (350)
159 PRK01688 histidinol-phosphate 99.2 1.3E-09 2.9E-14 116.3 21.3 146 173-329 60-236 (351)
160 TIGR00707 argD acetylornithine 99.2 1.6E-08 3.5E-13 108.4 29.1 266 170-580 69-378 (379)
161 PRK06234 methionine gamma-lyas 99.2 3E-10 6.5E-15 123.7 15.5 106 206-328 124-235 (400)
162 PRK07682 hypothetical protein; 99.2 2.1E-09 4.6E-14 115.7 21.9 149 173-329 60-249 (378)
163 PRK07309 aromatic amino acid a 99.2 3.7E-09 7.9E-14 114.6 23.6 118 204-328 130-259 (391)
164 TIGR01325 O_suc_HS_sulf O-succ 99.2 1.1E-09 2.4E-14 118.5 19.3 106 205-326 113-221 (380)
165 PRK03321 putative aminotransfe 99.2 4.2E-09 9E-14 112.2 23.0 184 108-329 23-239 (352)
166 PRK07810 O-succinylhomoserine 99.2 4.8E-09 1E-13 114.4 23.7 104 204-324 128-235 (403)
167 PRK07671 cystathionine beta-ly 99.2 3.2E-09 7E-14 114.8 22.2 136 170-322 50-212 (377)
168 TIGR02080 O_succ_thio_ly O-suc 99.2 5.1E-09 1.1E-13 113.4 23.6 87 226-322 125-214 (382)
169 PRK06176 cystathionine gamma-s 99.2 1.2E-09 2.6E-14 118.3 18.6 101 205-321 108-211 (380)
170 PRK07324 transaminase; Validat 99.2 6.8E-09 1.5E-13 111.9 24.1 147 174-328 66-244 (373)
171 PRK09276 LL-diaminopimelate am 99.1 4E-09 8.8E-14 113.7 22.0 148 173-328 72-261 (385)
172 PLN02624 ornithine-delta-amino 99.1 5.2E-08 1.1E-12 108.5 29.7 229 226-587 210-448 (474)
173 PRK05942 aspartate aminotransf 99.1 5.2E-09 1.1E-13 113.4 20.9 118 205-328 137-265 (394)
174 PRK13238 tnaA tryptophanase/L- 99.1 7.4E-08 1.6E-12 106.9 30.2 119 207-329 134-282 (460)
175 PRK07683 aminotransferase A; V 99.1 1.4E-08 3.1E-13 109.8 23.7 145 173-325 68-252 (387)
176 TIGR01326 OAH_OAS_sulfhy OAH/O 99.1 8.5E-09 1.8E-13 113.0 21.7 103 204-323 115-220 (418)
177 PRK06207 aspartate aminotransf 99.1 4.9E-08 1.1E-12 106.5 27.4 113 204-326 141-271 (405)
178 PTZ00377 alanine aminotransfer 99.1 2.8E-08 6.1E-13 110.8 25.5 148 109-280 78-259 (481)
179 PRK07568 aspartate aminotransf 99.1 3.5E-08 7.5E-13 106.8 25.6 180 108-321 31-250 (397)
180 PF00155 Aminotran_1_2: Aminot 99.1 3.9E-09 8.5E-14 112.4 17.7 271 172-577 46-363 (363)
181 PRK05964 adenosylmethionine--8 99.1 1.5E-07 3.2E-12 103.4 29.9 225 227-583 186-422 (423)
182 PLN02242 methionine gamma-lyas 99.0 2E-08 4.2E-13 110.1 22.3 93 226-328 151-246 (418)
183 PRK07777 aminotransferase; Val 99.0 4.7E-08 1E-12 105.6 24.1 114 205-326 125-252 (387)
184 TIGR01885 Orn_aminotrans ornit 99.0 2.5E-07 5.5E-12 100.6 29.6 221 226-582 172-401 (401)
185 TIGR02379 ECA_wecE TDP-4-keto- 99.0 1.3E-07 2.8E-12 102.4 27.0 135 179-330 62-205 (376)
186 COG1932 SerC Phosphoserine ami 99.0 4.9E-08 1.1E-12 102.2 22.5 215 244-583 145-363 (365)
187 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.0 5.5E-08 1.2E-12 105.0 23.9 124 181-322 64-195 (375)
188 PRK09265 aminotransferase AlaT 99.0 7E-08 1.5E-12 105.0 24.5 138 174-321 76-255 (404)
189 PRK10534 L-threonine aldolase; 99.0 2.6E-08 5.7E-13 105.2 20.2 108 211-326 98-215 (333)
190 PF00464 SHMT: Serine hydroxym 99.0 2.9E-08 6.3E-13 107.3 20.3 181 115-325 27-249 (399)
191 PRK06836 aspartate aminotransf 99.0 1.1E-07 2.3E-12 103.2 24.7 146 172-324 75-262 (394)
192 PRK12414 putative aminotransfe 99.0 1.1E-07 2.4E-12 102.8 24.5 151 170-328 70-257 (384)
193 PRK03967 histidinol-phosphate 99.0 1.6E-07 3.4E-12 99.9 24.6 182 108-326 19-224 (337)
194 PLN00175 aminotransferase fami 99.0 1.4E-07 3E-12 103.3 24.4 117 204-326 154-279 (413)
195 TIGR01265 tyr_nico_aTase tyros 99.0 1.7E-07 3.8E-12 101.9 24.9 141 173-321 76-256 (403)
196 PRK01278 argD acetylornithine 99.0 1.1E-06 2.4E-11 95.1 30.9 94 225-329 163-266 (389)
197 PRK13355 bifunctional HTH-doma 99.0 6.2E-08 1.3E-12 109.0 21.9 139 173-321 188-368 (517)
198 PRK03715 argD acetylornithine 98.9 4.7E-07 1E-11 98.6 28.0 215 226-583 168-393 (395)
199 PRK07050 cystathionine beta-ly 98.9 2.7E-08 5.8E-13 108.3 18.3 101 206-322 125-228 (394)
200 PRK06358 threonine-phosphate d 98.9 2.2E-07 4.7E-12 99.5 24.6 143 172-321 56-228 (354)
201 PRK04260 acetylornithine amino 98.9 9.2E-07 2E-11 95.3 29.3 93 226-329 154-256 (375)
202 PRK03317 histidinol-phosphate 98.9 1.6E-07 3.4E-12 100.9 23.2 147 173-328 68-250 (368)
203 PRK02627 acetylornithine amino 98.9 1.1E-06 2.4E-11 94.9 30.0 149 170-329 81-273 (396)
204 PLN02955 8-amino-7-oxononanoat 98.9 2.7E-07 5.8E-12 101.9 25.2 106 210-329 225-339 (476)
205 TIGR01264 tyr_amTase_E tyrosin 98.9 1.7E-07 3.7E-12 101.8 23.7 142 173-322 76-256 (401)
206 PRK07269 cystathionine gamma-s 98.9 8.3E-08 1.8E-12 103.4 20.8 138 172-322 56-214 (364)
207 PRK01533 histidinol-phosphate 98.9 2.7E-07 5.8E-12 99.4 24.6 197 86-326 12-242 (366)
208 PRK06107 aspartate aminotransf 98.9 1.8E-07 3.9E-12 101.8 23.4 150 170-327 74-262 (402)
209 PRK05967 cystathionine beta-ly 98.9 7.6E-08 1.6E-12 104.6 19.8 91 204-309 122-213 (395)
210 COG0156 BioF 7-keto-8-aminopel 98.9 4.3E-07 9.3E-12 98.0 25.0 282 159-580 75-387 (388)
211 PRK08153 histidinol-phosphate 98.9 2.6E-07 5.6E-12 99.4 23.5 144 173-326 70-243 (369)
212 PRK05166 histidinol-phosphate 98.9 2.3E-07 5.1E-12 99.8 22.9 139 174-321 75-246 (371)
213 TIGR03531 selenium_SpcS O-phos 98.9 2.8E-07 6E-12 101.4 23.4 150 169-323 104-289 (444)
214 PRK09082 methionine aminotrans 98.9 1.8E-07 3.8E-12 101.2 21.6 113 205-325 131-255 (386)
215 TIGR03576 pyridox_MJ0158 pyrid 98.9 2.2E-07 4.8E-12 99.4 22.1 152 170-329 54-225 (346)
216 PRK08247 cystathionine gamma-s 98.9 1.9E-07 4.2E-12 100.5 21.5 132 172-320 54-211 (366)
217 PRK06425 histidinol-phosphate 98.9 5E-07 1.1E-11 95.8 24.3 143 173-328 43-215 (332)
218 PRK04781 histidinol-phosphate 98.9 8.8E-07 1.9E-11 95.2 26.3 149 173-329 62-243 (364)
219 COG2008 GLY1 Threonine aldolas 98.9 1.7E-07 3.8E-12 98.1 19.4 101 221-325 108-217 (342)
220 PRK08175 aminotransferase; Val 98.9 4.9E-07 1.1E-11 98.1 23.7 114 206-326 132-257 (395)
221 PRK15407 lipopolysaccharide bi 98.8 1.2E-06 2.7E-11 96.6 27.1 107 206-325 128-238 (438)
222 PTZ00433 tyrosine aminotransfe 98.8 4.6E-07 9.9E-12 99.0 23.4 142 173-320 78-263 (412)
223 PRK06348 aspartate aminotransf 98.8 6.9E-07 1.5E-11 96.6 23.5 146 174-325 70-253 (384)
224 PLN02376 1-aminocyclopropane-1 98.8 6.1E-07 1.3E-11 100.6 23.1 150 173-322 97-295 (496)
225 PRK09148 aminotransferase; Val 98.8 6.6E-07 1.4E-11 97.6 22.4 148 174-328 72-260 (405)
226 PF01041 DegT_DnrJ_EryC1: DegT 98.8 1.4E-06 2.9E-11 93.8 24.5 300 179-578 56-363 (363)
227 TIGR03811 tyr_de_CO2_Ent tyros 98.8 2.2E-06 4.8E-11 97.6 26.7 124 199-324 232-400 (608)
228 PRK06290 aspartate aminotransf 98.8 1.1E-06 2.3E-11 96.2 23.4 145 173-326 84-271 (410)
229 PRK06434 cystathionine gamma-l 98.8 9.6E-07 2.1E-11 95.8 22.6 100 203-321 121-223 (384)
230 PLN02656 tyrosine transaminase 98.7 9.7E-07 2.1E-11 96.4 21.6 143 173-321 76-256 (409)
231 PLN02187 rooty/superroot1 98.7 2E-06 4.3E-11 95.6 24.2 141 173-321 111-291 (462)
232 PRK02610 histidinol-phosphate 98.7 3E-06 6.4E-11 91.4 24.8 153 173-328 69-256 (374)
233 PRK14809 histidinol-phosphate 98.7 2E-06 4.4E-11 91.9 23.1 146 173-328 68-244 (357)
234 cd00617 Tnase_like Tryptophana 98.7 6.4E-06 1.4E-10 90.7 27.3 120 206-329 108-257 (431)
235 PRK07366 succinyldiaminopimela 98.7 1.7E-06 3.7E-11 93.6 22.2 146 174-325 72-258 (388)
236 PRK08068 transaminase; Reviewe 98.7 1.5E-06 3.3E-11 94.0 21.7 147 174-328 74-262 (389)
237 TIGR03246 arg_catab_astC succi 98.7 1.3E-05 2.9E-10 87.2 28.9 218 226-583 168-395 (397)
238 COG2873 MET17 O-acetylhomoseri 98.7 4E-06 8.6E-11 88.1 23.2 109 202-325 118-227 (426)
239 PRK15481 transcriptional regul 98.7 4.1E-06 8.8E-11 92.1 24.8 142 173-325 124-300 (431)
240 PLN02607 1-aminocyclopropane-1 98.7 2E-06 4.4E-11 95.1 22.2 149 173-321 98-294 (447)
241 KOG1368 Threonine aldolase [Am 98.7 2.7E-07 5.9E-12 93.9 13.8 232 209-579 119-364 (384)
242 COG1103 Archaea-specific pyrid 98.7 3E-07 6.6E-12 92.5 13.9 152 172-326 63-237 (382)
243 TIGR03538 DapC_gpp succinyldia 98.7 3.7E-06 7.9E-11 91.2 23.7 147 173-325 67-263 (393)
244 PLN00143 tyrosine/nicotianamin 98.7 1.3E-05 2.7E-10 87.7 28.0 142 174-321 78-257 (409)
245 PRK08636 aspartate aminotransf 98.7 3.6E-06 7.8E-11 91.7 23.3 148 174-325 75-267 (403)
246 PRK07392 threonine-phosphate d 98.7 6E-06 1.3E-10 88.5 24.6 145 173-325 60-235 (360)
247 TIGR03539 DapC_actino succinyl 98.7 1.6E-06 3.4E-11 92.9 19.8 144 174-325 60-236 (357)
248 PRK05093 argD bifunctional N-s 98.7 1.7E-05 3.7E-10 86.4 28.1 93 226-329 173-275 (403)
249 PRK07049 methionine gamma-lyas 98.7 1.2E-06 2.6E-11 96.4 19.2 110 206-325 143-261 (427)
250 PRK06702 O-acetylhomoserine am 98.7 8.3E-06 1.8E-10 89.8 25.7 102 206-321 121-223 (432)
251 PLN00145 tyrosine/nicotianamin 98.6 6.2E-06 1.3E-10 90.8 24.3 143 173-321 97-277 (430)
252 PRK02936 argD acetylornithine 98.6 2.8E-05 6.1E-10 83.7 28.8 92 226-328 156-257 (377)
253 PRK07865 N-succinyldiaminopime 98.6 2.7E-06 5.8E-11 91.2 20.7 144 174-325 66-242 (364)
254 PRK14808 histidinol-phosphate 98.6 6.5E-06 1.4E-10 87.5 23.1 140 173-328 59-224 (335)
255 PRK11522 putrescine--2-oxoglut 98.6 3.4E-05 7.4E-10 85.7 29.5 222 226-583 214-451 (459)
256 TIGR02407 ectoine_ectB diamino 98.6 4.6E-06 9.9E-11 91.4 21.8 223 227-582 178-411 (412)
257 TIGR03372 putres_am_tran putre 98.6 5.1E-05 1.1E-09 84.0 29.8 220 226-581 207-442 (442)
258 PRK12381 bifunctional succinyl 98.6 1.9E-05 4.2E-10 86.2 25.3 217 226-583 172-399 (406)
259 PLN02450 1-aminocyclopropane-1 98.5 2.3E-05 5.1E-10 87.3 25.6 150 174-323 90-289 (468)
260 COG0399 WecE Predicted pyridox 98.5 2.7E-05 5.9E-10 83.7 24.9 299 179-582 65-372 (374)
261 COG0079 HisC Histidinol-phosph 98.5 1.9E-05 4.1E-10 84.9 23.8 145 172-329 59-235 (356)
262 PRK05664 threonine-phosphate d 98.5 2E-05 4.4E-10 83.5 23.3 134 173-326 52-212 (330)
263 PF01053 Cys_Met_Meta_PP: Cys/ 98.5 1.2E-05 2.6E-10 87.3 21.8 130 175-322 83-219 (386)
264 PRK13360 omega amino acid--pyr 98.5 0.00013 2.9E-09 80.7 30.4 97 227-329 201-307 (442)
265 PRK09147 succinyldiaminopimela 98.5 1.8E-05 3.9E-10 85.9 23.2 114 205-325 133-264 (396)
266 PF01276 OKR_DC_1: Orn/Lys/Arg 98.5 2.5E-06 5.4E-11 92.8 16.4 152 170-324 66-257 (417)
267 PRK09221 beta alanine--pyruvat 98.5 0.00016 3.5E-09 80.1 30.8 227 228-583 205-443 (445)
268 PRK09440 avtA valine--pyruvate 98.5 2.7E-05 5.9E-10 85.0 24.2 143 174-325 78-267 (416)
269 PRK09264 diaminobutyrate--2-ox 98.5 1.4E-05 3E-10 87.9 21.9 224 226-583 181-416 (425)
270 PRK15029 arginine decarboxylas 98.5 7.2E-05 1.6E-09 87.1 27.7 152 170-323 205-402 (755)
271 TIGR00713 hemL glutamate-1-sem 98.5 8.5E-05 1.8E-09 81.5 27.2 186 107-329 46-285 (423)
272 COG4992 ArgD Ornithine/acetylo 98.4 0.0002 4.2E-09 77.0 28.1 268 174-584 88-399 (404)
273 PRK06541 hypothetical protein; 98.4 0.00023 5E-09 79.2 30.0 228 228-583 208-455 (460)
274 COG0112 GlyA Glycine/serine hy 98.4 8.6E-05 1.9E-09 78.9 24.4 317 115-583 33-390 (413)
275 PRK05839 hypothetical protein; 98.4 2.6E-05 5.6E-10 84.2 21.2 113 205-326 125-252 (374)
276 COG0436 Aspartate/tyrosine/aro 98.4 2.9E-05 6.3E-10 84.6 21.6 111 206-324 130-255 (393)
277 TIGR03542 DAPAT_plant LL-diami 98.4 3.3E-05 7.1E-10 84.2 22.0 82 243-324 173-264 (402)
278 PRK07036 hypothetical protein; 98.4 0.00046 9.9E-09 77.0 30.9 94 228-329 207-313 (466)
279 KOG1383 Glutamate decarboxylas 98.4 4.6E-05 9.9E-10 82.2 21.7 148 169-323 119-305 (491)
280 PLN02231 alanine transaminase 98.4 0.0001 2.3E-09 83.4 25.9 108 173-280 171-312 (534)
281 KOG0628 Aromatic-L-amino-acid/ 98.4 5.3E-05 1.1E-09 81.6 21.6 289 172-584 156-472 (511)
282 PRK05769 4-aminobutyrate amino 98.3 9.1E-05 2E-09 82.0 23.3 206 243-583 221-439 (441)
283 PRK08117 4-aminobutyrate amino 98.3 0.00027 5.8E-09 78.0 26.9 226 226-583 191-429 (433)
284 COG1167 ARO8 Transcriptional r 98.3 0.00018 3.8E-09 80.1 25.0 125 195-328 185-320 (459)
285 PRK06959 putative threonine-ph 98.3 0.00015 3.2E-09 77.3 23.5 135 173-328 56-220 (339)
286 COG0160 GabT 4-aminobutyrate a 98.3 0.00091 2E-08 73.5 29.4 227 227-583 206-445 (447)
287 PRK06855 aminotransferase; Val 98.3 0.00028 6.1E-09 77.8 25.6 144 174-321 77-258 (433)
288 PLN02760 4-aminobutyrate:pyruv 98.3 0.00011 2.3E-09 82.8 21.9 228 228-583 247-491 (504)
289 PRK06058 4-aminobutyrate amino 98.2 0.00012 2.6E-09 81.0 21.5 209 243-583 219-442 (443)
290 COG0403 GcvP Glycine cleavage 98.2 0.00093 2E-08 71.8 26.6 258 199-580 178-447 (450)
291 PRK07986 adenosylmethionine--8 98.2 0.0012 2.5E-08 73.0 28.7 223 227-583 191-423 (428)
292 COG1921 SelA Selenocysteine sy 98.2 5.6E-06 1.2E-10 88.5 10.0 114 205-331 127-246 (395)
293 PRK07482 hypothetical protein; 98.2 0.0015 3.2E-08 72.8 29.7 232 227-583 206-454 (461)
294 PRK06943 adenosylmethionine--8 98.2 0.0012 2.7E-08 73.3 29.0 228 227-586 208-449 (453)
295 PRK06777 4-aminobutyrate amino 98.2 0.0014 3.1E-08 72.1 29.2 226 227-582 183-420 (421)
296 PRK00062 glutamate-1-semialdeh 98.2 0.00061 1.3E-08 75.0 26.2 96 226-329 183-287 (426)
297 PRK07590 L,L-diaminopimelate a 98.2 0.00025 5.5E-09 77.4 22.0 85 242-326 175-269 (409)
298 PRK07480 putative aminotransfe 98.1 0.003 6.5E-08 70.3 29.7 94 228-328 206-310 (456)
299 PRK06173 adenosylmethionine--8 98.1 0.0019 4.2E-08 71.3 27.8 223 227-584 193-426 (429)
300 PRK08360 4-aminobutyrate amino 98.1 0.00042 9.1E-09 76.8 22.6 223 228-583 190-426 (443)
301 PF03841 SelA: L-seryl-tRNA se 98.1 1.4E-06 3.1E-11 92.2 2.4 112 208-330 110-235 (367)
302 KOG1360 5-aminolevulinate synt 98.1 0.00048 1E-08 73.1 20.6 228 226-583 288-524 (570)
303 PTZ00376 aspartate aminotransf 98.1 0.00036 7.9E-09 76.1 20.8 110 205-319 140-264 (404)
304 COG1003 GcvP Glycine cleavage 98.0 0.00061 1.3E-08 73.2 21.2 108 208-329 176-294 (496)
305 PRK06062 hypothetical protein; 98.0 0.00029 6.4E-09 78.2 19.8 96 227-329 200-306 (451)
306 PRK09792 4-aminobutyrate trans 98.0 0.0031 6.7E-08 69.4 27.3 226 228-582 184-420 (421)
307 PRK06082 4-aminobutyrate amino 98.0 0.009 1.9E-07 66.6 31.1 107 424-583 340-451 (459)
308 PRK13578 ornithine decarboxyla 98.0 0.0014 2.9E-08 76.1 25.0 149 170-323 174-371 (720)
309 PLN02672 methionine S-methyltr 98.0 0.0022 4.8E-08 77.4 26.4 147 171-323 735-927 (1082)
310 PF01212 Beta_elim_lyase: Beta 97.9 1.6E-05 3.5E-10 83.1 7.2 148 169-324 28-211 (290)
311 KOG0053 Cystathionine beta-lya 97.9 0.00034 7.3E-09 75.4 17.2 96 201-311 132-228 (409)
312 PRK07030 adenosylmethionine--8 97.9 0.0067 1.4E-07 67.8 28.3 227 227-584 201-447 (466)
313 PRK04013 argD acetylornithine/ 97.9 0.018 3.9E-07 62.3 30.5 88 226-324 151-247 (364)
314 PRK06917 hypothetical protein; 97.9 0.012 2.7E-07 65.3 29.8 233 228-584 186-438 (447)
315 COG0626 MetC Cystathionine bet 97.9 0.0012 2.5E-08 71.8 20.8 131 175-320 91-224 (396)
316 PRK06105 aminotransferase; Pro 97.9 0.0012 2.6E-08 73.5 21.3 228 228-583 205-449 (460)
317 PRK12403 putative aminotransfe 97.9 0.013 2.7E-07 65.5 29.2 98 228-329 209-314 (460)
318 PRK08593 4-aminobutyrate amino 97.9 0.0016 3.4E-08 72.2 21.9 82 243-329 207-298 (445)
319 PLN00144 acetylornithine trans 97.9 0.0011 2.5E-08 71.9 20.4 216 226-583 155-380 (382)
320 KOG1357 Serine palmitoyltransf 97.8 0.002 4.3E-08 69.6 20.7 148 171-329 183-367 (519)
321 PRK07483 hypothetical protein; 97.8 0.019 4.2E-07 63.6 29.7 233 228-583 186-437 (443)
322 PRK08354 putative aminotransfe 97.8 0.011 2.3E-07 62.2 26.2 130 174-320 44-196 (311)
323 KOG0629 Glutamate decarboxylas 97.8 3.6E-05 7.8E-10 82.1 7.2 133 188-324 197-338 (510)
324 PRK12566 glycine dehydrogenase 97.8 0.00093 2E-08 79.1 19.6 219 245-578 208-439 (954)
325 PRK07678 aminotransferase; Val 97.8 0.0019 4.2E-08 71.7 21.2 231 230-583 202-449 (451)
326 PRK06916 adenosylmethionine--8 97.8 0.015 3.4E-07 64.7 28.4 227 227-583 210-455 (460)
327 PRK15399 lysine decarboxylase 97.8 0.012 2.6E-07 68.3 28.0 146 170-322 195-382 (713)
328 KOG2467 Glycine/serine hydroxy 97.8 0.01 2.2E-07 62.8 24.6 180 115-325 47-269 (477)
329 PRK07495 4-aminobutyrate amino 97.8 0.0029 6.2E-08 69.8 22.2 226 227-583 183-421 (425)
330 PRK15400 lysine decarboxylase 97.8 0.0039 8.4E-08 72.4 23.4 146 170-321 195-381 (714)
331 PRK13237 tyrosine phenol-lyase 97.8 0.00082 1.8E-08 74.1 17.1 98 222-323 158-275 (460)
332 PRK09257 aromatic amino acid a 97.8 0.0019 4.1E-08 70.2 19.9 112 204-320 135-260 (396)
333 PF02347 GDC-P: Glycine cleava 97.7 0.0013 2.9E-08 71.9 17.9 83 243-334 197-289 (429)
334 PRK04612 argD acetylornithine 97.7 0.0026 5.7E-08 69.7 20.2 106 424-583 298-403 (408)
335 PRK08742 adenosylmethionine--8 97.7 0.031 6.8E-07 62.5 28.8 95 227-328 223-328 (472)
336 TIGR03251 LAT_fam L-lysine 6-t 97.7 0.0034 7.4E-08 69.3 20.7 75 228-305 206-288 (431)
337 PRK00615 glutamate-1-semialdeh 97.7 0.0017 3.7E-08 71.8 18.2 97 226-329 187-291 (433)
338 PRK07481 hypothetical protein; 97.7 0.0057 1.2E-07 68.0 22.3 83 243-329 213-305 (449)
339 PRK06938 diaminobutyrate--2-ox 97.7 0.0088 1.9E-07 66.8 23.7 93 227-324 215-317 (464)
340 TIGR00700 GABAtrnsam 4-aminobu 97.6 0.0059 1.3E-07 67.1 21.5 99 227-329 182-288 (420)
341 TIGR02618 tyr_phenol_ly tyrosi 97.6 0.0022 4.8E-08 70.6 17.4 111 207-322 127-267 (450)
342 TIGR00508 bioA adenosylmethion 97.6 0.0069 1.5E-07 66.9 20.9 224 227-583 194-426 (427)
343 TIGR00699 GABAtrns_euk 4-amino 97.6 0.0043 9.3E-08 69.2 19.1 102 424-580 360-463 (464)
344 COG1448 TyrB Aspartate/tyrosin 97.5 0.016 3.4E-07 61.9 21.5 111 206-322 137-262 (396)
345 PRK06149 hypothetical protein; 97.5 0.0071 1.5E-07 73.4 21.8 212 243-583 744-970 (972)
346 PRK05965 hypothetical protein; 97.5 0.01 2.2E-07 66.1 20.8 226 228-583 202-447 (459)
347 PRK05630 adenosylmethionine--8 97.5 0.0072 1.6E-07 66.6 19.2 208 245-583 203-420 (422)
348 TIGR00709 dat 2,4-diaminobutyr 97.5 0.013 2.9E-07 64.8 21.4 209 243-583 207-435 (442)
349 PRK06148 hypothetical protein; 97.5 0.014 3E-07 71.2 23.2 211 243-583 784-1010(1013)
350 PRK05639 4-aminobutyrate amino 97.5 0.013 2.8E-07 65.3 21.0 211 243-584 222-444 (457)
351 KOG2790 Phosphoserine aminotra 97.4 0.0023 4.9E-08 65.5 13.5 218 243-583 148-368 (370)
352 PRK08088 4-aminobutyrate amino 97.4 0.013 2.8E-07 64.5 20.6 97 227-329 184-290 (425)
353 PLN02397 aspartate transaminas 97.4 0.011 2.4E-07 65.1 18.8 112 203-319 156-282 (423)
354 PRK08297 L-lysine aminotransfe 97.3 0.0075 1.6E-07 66.9 17.5 103 424-583 337-441 (443)
355 COG1168 MalY Bifunctional PLP- 97.3 0.18 4E-06 53.9 26.4 104 207-317 125-241 (388)
356 PRK09275 aspartate aminotransf 97.3 0.013 2.8E-07 66.3 18.5 104 210-323 213-328 (527)
357 KOG1402 Ornithine aminotransfe 97.3 0.036 7.8E-07 58.1 19.8 97 226-330 195-300 (427)
358 TIGR03801 asp_4_decarbox aspar 97.2 0.011 2.4E-07 66.8 17.4 104 209-323 206-327 (521)
359 PRK06918 4-aminobutyrate amino 97.2 0.025 5.4E-07 62.8 20.1 110 424-584 330-444 (451)
360 PRK08637 hypothetical protein; 97.2 0.015 3.1E-07 63.1 17.7 112 208-321 113-242 (388)
361 KOG1359 Glycine C-acetyltransf 97.2 0.013 2.8E-07 60.4 15.6 226 224-583 176-412 (417)
362 PRK12389 glutamate-1-semialdeh 97.2 0.023 5E-07 62.7 18.6 96 226-329 186-290 (428)
363 PRK06931 diaminobutyrate--2-ox 97.1 0.06 1.3E-06 60.1 22.0 109 424-583 335-454 (459)
364 PLN02974 adenosylmethionine-8- 97.1 0.048 1E-06 64.8 21.9 83 245-329 587-677 (817)
365 PRK07046 aminotransferase; Val 97.0 0.03 6.5E-07 62.3 17.9 91 226-329 206-307 (453)
366 PF12897 Aminotran_MocR: Alani 97.0 0.14 2.9E-06 55.2 21.7 144 172-324 71-271 (425)
367 PLN02482 glutamate-1-semialdeh 97.0 0.036 7.8E-07 62.1 18.1 96 226-329 232-336 (474)
368 KOG0256 1-aminocyclopropane-1- 96.9 0.15 3.2E-06 55.0 21.2 117 207-323 189-320 (471)
369 PLN02368 alanine transaminase 96.9 0.0075 1.6E-07 66.2 11.5 145 174-320 111-306 (407)
370 PRK06209 glutamate-1-semialdeh 96.6 0.084 1.8E-06 58.4 17.0 93 226-326 173-270 (431)
371 TIGR02617 tnaA_trp_ase tryptop 96.6 0.029 6.2E-07 61.7 12.9 111 207-323 140-281 (467)
372 KOG2040 Glycine dehydrogenase 96.3 0.62 1.3E-05 52.9 21.6 110 208-329 649-770 (1001)
373 KOG1358 Serine palmitoyltransf 96.2 0.53 1.1E-05 50.6 19.4 147 174-325 143-319 (467)
374 KOG0257 Kynurenine aminotransf 96.1 0.03 6.6E-07 60.3 9.9 112 209-328 137-267 (420)
375 COG1982 LdcC Arginine/lysine/o 96.0 0.86 1.9E-05 51.6 21.0 135 171-310 71-236 (557)
376 COG0161 BioA Adenosylmethionin 96.0 0.28 6E-06 54.2 16.7 225 227-584 200-444 (449)
377 PF05889 SLA_LP_auto_ag: Solub 95.8 0.0041 8.9E-08 66.9 1.6 100 205-309 117-235 (389)
378 KOG0259 Tyrosine aminotransfer 95.3 0.15 3.3E-06 54.5 11.0 101 173-279 106-239 (447)
379 COG3977 Alanine-alpha-ketoisov 94.5 3.4 7.4E-05 43.3 18.0 85 242-329 178-271 (417)
380 COG0001 HemL Glutamate-1-semia 94.4 3.1 6.8E-05 45.8 18.5 94 226-330 186-291 (432)
381 KOG0633 Histidinol phosphate a 94.2 2.6 5.6E-05 43.3 16.1 67 209-280 131-199 (375)
382 KOG1404 Alanine-glyoxylate ami 93.4 1.9 4.1E-05 46.6 14.2 82 244-329 213-303 (442)
383 KOG2040 Glycine dehydrogenase 92.7 0.85 1.8E-05 51.9 10.9 75 244-325 250-330 (1001)
384 KOG1412 Aspartate aminotransfe 92.7 2.6 5.5E-05 44.4 13.6 108 206-320 142-267 (410)
385 PF00202 Aminotran_3: Aminotra 92.6 0.79 1.7E-05 49.0 10.4 82 245-330 180-269 (339)
386 KOG0634 Aromatic amino acid am 89.4 1.7 3.7E-05 47.4 9.0 77 202-280 161-245 (472)
387 COG3033 TnaA Tryptophanase [Am 88.9 2.4 5.3E-05 45.3 9.5 97 222-324 166-284 (471)
388 KOG0258 Alanine aminotransfera 82.6 12 0.00027 40.5 11.0 109 171-280 114-256 (475)
389 KOG1405 4-aminobutyrate aminot 82.6 53 0.0012 35.5 15.5 76 226-303 254-341 (484)
390 KOG1401 Acetylornithine aminot 81.8 87 0.0019 34.4 18.9 98 226-331 192-299 (433)
391 PF06838 Met_gamma_lyase: Meth 78.2 18 0.00039 39.2 10.5 106 206-326 124-243 (403)
392 COG4100 Cystathionine beta-lya 45.0 61 0.0013 34.3 6.7 91 205-309 134-236 (416)
393 PF02310 B12-binding: B12 bind 22.9 5E+02 0.011 22.4 8.2 89 198-302 16-110 (121)
394 COG1105 FruK Fructose-1-phosph 21.9 1.9E+02 0.0041 30.8 5.9 59 221-280 107-167 (310)
395 PF08915 tRNA-Thr_ED: Archaea- 20.2 2.4E+02 0.0053 26.4 5.6 51 170-220 54-118 (138)
No 1
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=1.3e-63 Score=581.75 Aligned_cols=420 Identities=23% Similarity=0.354 Sum_probs=332.0
Q ss_pred HHHHHhCC-CCCC---chhHHHHHHhhccCcCCCCceeeecCCCCCCCHHHHHHHh-cCCCCCCCCCCCCCCCCcccccc
Q 007454 78 TEFTKAYP-QYFD---TYQIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQE-SSPSHLRPSLPSQNLDIPFFSVS 152 (603)
Q Consensus 78 ~~F~~~~p-~y~~---~~~vd~iR~~efp~L~~~~~vYLDyaa~tl~~~~v~~a~~-~~~~~~~~~~p~~~~~~p~f~~s 152 (603)
..|+..|. .|.+ ..+++.+|+.+||.| +++|||||||++++++.+++++. .++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~R~~~fp~l--~~~iYLD~Aatt~~~~~~V~~~~~~~~~------------------- 60 (805)
T PLN02724 2 ESFLKEFGGYYGYPDGPKPIDELRATEFARL--KGVVYLDHAGATLYSESQLEAALADFSS------------------- 60 (805)
T ss_pred hhHHhhhcccCCcccchhhHHHHHHHHhhhc--CCCEeEeCCCCCCCCHHHHHHHHHHHHh-------------------
Confidence 46787773 3444 345999997789999 67999999999999887776654 3321
Q ss_pred ccccccCccccccchHHHHHHHHHHHHHHHcCCCCCc--EEEe--------------------------ccCchHHHHHH
Q 007454 153 YKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEND--YVYD--------------------------YESEAVEAMIR 204 (603)
Q Consensus 153 ~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~~~e--~vf~--------------------------~es~sV~~~~~ 204 (603)
+.++||++.+..+..+.+.++++|++||+|||+++++ ++|+ .||+++..+++
T Consensus 61 ~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~ 140 (805)
T PLN02724 61 NVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIRE 140 (805)
T ss_pred hccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHH
Confidence 1347888876667778899999999999999998775 4663 35667777788
Q ss_pred HHHHcCCEEEEEeccC-------CccccCH--HHHHHHHhh----cCCCCCCeeEEEEeCccccccccccHHHHHHHHhC
Q 007454 205 TSEKRGARVMSAEFSW-------PRLRINS--EKLRKMVVS----KGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQEN 271 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~-------~~g~i~~--~~L~~~l~~----~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~~a~e~ 271 (603)
.++++|++|++++++. ..+.++. ++|++.+.. .....++|+||+++|+||+||.++|+++|.++++.
T Consensus 141 ~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~ 220 (805)
T PLN02724 141 YALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDN 220 (805)
T ss_pred HHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHh
Confidence 8899999999998762 1334433 567665421 00112467999999999999999999998766552
Q ss_pred ---------CcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCC-Cceeccc
Q 007454 272 ---------DWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLLP 341 (603)
Q Consensus 272 ---------g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~g-G~v~~~~ 341 (603)
+|+|+|||+|++|+ .++||+++++||+++|+|||||+ |+|+|+||||+++++.|+|.++| |++....
T Consensus 221 ~~~~~~~~g~~~v~vDaaQ~~g~--~piDv~~~~~Dfl~~S~HK~~Gg-P~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~ 297 (805)
T PLN02724 221 QHSNFSKSGRWMVLLDAAKGCGT--SPPDLSRYPADFVVVSFYKIFGY-PTGLGALLVRRDAAKLLKKKYFGGGTVAASI 297 (805)
T ss_pred cccccccCcceEEEeehhhhcCC--CCCChhhcCCCEEEEecceeccC-CCCceEEEEehhhhhhhcCCccCCCceEEEe
Confidence 48999999999999 79999999999999999999997 99999999999998889998888 4553221
Q ss_pred cccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchh
Q 007454 342 AKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEI 421 (603)
Q Consensus 342 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (603)
....+....+ ..+.+ ||+||+|+++++|++
T Consensus 298 ~~~~~~~~~~----------~~~~r--fE~GT~n~~~i~~l~-------------------------------------- 327 (805)
T PLN02724 298 ADIDFVKRRE----------RVEQR--FEDGTISFLSIAALR-------------------------------------- 327 (805)
T ss_pred cccceeeccc----------cHHHH--hcCCCcchhHHHHHH--------------------------------------
Confidence 1111100000 01244 799999999999988
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCC----CCCCCCEEEEEEccCCCCccCHHH
Q 007454 422 ECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKI----RFDRGPALAFNVFDWKREKIEPVL 497 (603)
Q Consensus 422 ~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~----~~~rg~ivsFnv~~~~g~~v~~~~ 497 (603)
+|+++++++|+++|.+|++.|+++|+++|++++|.| |.|+|+|||+.. ...|+|||+||+.+.+|+.|++.+
T Consensus 328 --aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~--g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~ 403 (805)
T PLN02724 328 --HGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGN--GAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHRE 403 (805)
T ss_pred --HHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCC--CCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHH
Confidence 799999999999999999999999999999999877 889999999851 236899999999999999999999
Q ss_pred HHHHHhcCCcEEeeCcccCccCCchhhhh----hHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHH
Q 007454 498 VQKLADRENISLSYGSLHHIWFSDKYQKE----KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRL 573 (603)
Q Consensus 498 V~~Lad~~gI~lr~G~~C~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l 573 (603)
+.+|++.+||++|+||+|+++.++.++++ .....+++..|++..+.. .+.+.|+||||||+|||+||||+|
T Consensus 404 v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~-----~~~~~G~vRvS~g~ynt~eDvd~l 478 (805)
T PLN02724 404 VEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVI-----HGRPTGAVRVSFGYMSTFEDCQKF 478 (805)
T ss_pred HHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhhee-----cCcccceEEEEcCccCCHHHHHHH
Confidence 99999999999999999999988765432 234455677787643322 123458999999999999999999
Q ss_pred HHHHHHH
Q 007454 574 WAFVAQF 580 (603)
Q Consensus 574 ~~~l~~~ 580 (603)
+++|+++
T Consensus 479 v~~l~~~ 485 (805)
T PLN02724 479 IDFIISS 485 (805)
T ss_pred HHHHHHH
Confidence 9999885
No 2
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.7e-59 Score=504.06 Aligned_cols=365 Identities=22% Similarity=0.287 Sum_probs=303.8
Q ss_pred hHHHHHHhhccCcCCC---CceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCcc-ccccch
Q 007454 92 QIDQIRAKEYYQLSLS---NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQ-LLHGGQ 167 (603)
Q Consensus 92 ~vd~iR~~efp~L~~~---~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~-~~~g~~ 167 (603)
++..+|+ +||.|... +.+|||++++++.|..|++++..++.. ..+|++.. +..+..
T Consensus 4 ~~~~~r~-~fp~l~~~~~~~~vylD~aa~~~~p~~V~~a~~~~~~~-------------------~~an~~r~~~~~~~~ 63 (405)
T COG0520 4 DVAAVRA-DFPALKREVGKPLVYLDNAATSQKPQAVLDAVAEYYRR-------------------YNANVHRGAHTLAEE 63 (405)
T ss_pred ChHHHHh-hCHHHhhccCCCeEEecCcccccCCHHHHHHHHHHHHh-------------------hcCCcCcccchHHHH
Confidence 5677888 59998532 369999999999999999998876431 23677743 445667
Q ss_pred HHHHHHHHHHHHHHHcCCCC-CcEEEe----------------------------ccCc-hHHHHHHHHHHcCCEEEEEe
Q 007454 168 ESGLESAMKKRIMDFLNISE-NDYVYD----------------------------YESE-AVEAMIRTSEKRGARVMSAE 217 (603)
Q Consensus 168 ~~~~~~~aR~~Ia~~lna~~-~e~vf~----------------------------~es~-sV~~~~~~a~~~Ga~V~~~~ 217 (603)
+++.++++|+.|++|+|+++ +||+|+ .||+ .+..|.+.+++.|++|+++|
T Consensus 64 ~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~ 143 (405)
T COG0520 64 ATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIP 143 (405)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEe
Confidence 88999999999999999996 999874 2333 23445778888899999999
Q ss_pred ccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCC
Q 007454 218 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVR 296 (603)
Q Consensus 218 ~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~ 296 (603)
++ +++.++.++++++|. ++|+||+++++||+||.++|+++| ++||++|++|+|||+|.+|| .++|+++++
T Consensus 144 ~~-~~g~~~~~~~~~~i~------~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h--~~idv~~l~ 214 (405)
T COG0520 144 LD-DDGLLDLDALEKLIT------PKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGH--LPIDVQELG 214 (405)
T ss_pred cC-CCCCcCHHHHHHhcC------CCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCc--cCCCchhcC
Confidence 98 799999999999876 379999999999999999999966 58999999999999999999 899999999
Q ss_pred CcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCC-CceeccccccccccccccCCCCCCcccCcccccccccCCCC
Q 007454 297 PDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 375 (603)
Q Consensus 297 ~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n 375 (603)
|||++||+|||+++ |+|+|+||+|++.++.|.|..+| |++..+..... .... ..+.+ ||.||+|
T Consensus 215 ~Df~afsgHKwl~g-P~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~-~~~~-----------~~p~r--fe~gTpn 279 (405)
T COG0520 215 CDFLAFSGHKWLLG-PTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEG-VTLA-----------ELPLR--FEAGTPN 279 (405)
T ss_pred CCEEEEcccccccC-CCceEEEEEchHHHhhcCCcccCCCceeeeccccc-cccc-----------Ccchh--hccCCch
Confidence 99999999995544 99999999999999999888877 56654433111 1001 12344 7999999
Q ss_pred hhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC
Q 007454 376 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 455 (603)
Q Consensus 376 ~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L 455 (603)
+.++++++ +|+++++++|++.|.+|++.|++|++++|+++
T Consensus 280 ~~~~i~l~----------------------------------------aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~ 319 (405)
T COG0520 280 IAGAIGLA----------------------------------------AALDYLLEIGMEAIEAHERELTEYLLEGLSEL 319 (405)
T ss_pred HHHHHhHH----------------------------------------HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999988 79999999999999999999999999999986
Q ss_pred CCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhh
Q 007454 456 QHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTD 535 (603)
Q Consensus 456 ~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~ 535 (603)
+ .|+||||.. ..|+++++|++.+ +++..|.+.++.+||++|+|++|+.+.++..
T Consensus 320 ~--------~v~i~g~~~-~~r~~~vsF~v~~-----~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~------------ 373 (405)
T COG0520 320 P--------GVEIYGPPD-ADRGGIVSFNVKG-----IHPHDVATLLDEKGIAVRAGHHCAQPLHRLL------------ 373 (405)
T ss_pred C--------CeEEecCCc-ccCceEEEEEeCC-----CCHHHHHHHHHhCCeEEEeccccccHHHHhc------------
Confidence 3 399999975 5799999999999 5678888888999999999999998653211
Q ss_pred cccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 007454 536 REAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~ 582 (603)
.. .+.+|+||++|||+||||+|+++|++++.
T Consensus 374 ---------------~~-~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 374 ---------------GV-DATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred ---------------CC-CCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 11 14599999999999999999999998864
No 3
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-58 Score=486.45 Aligned_cols=345 Identities=18% Similarity=0.148 Sum_probs=301.7
Q ss_pred ceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCCCC
Q 007454 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (603)
Q Consensus 109 ~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~~~ 188 (603)
+|||||+||||+.+.|+++|..+++. .++||+|.|.+|.++.++++++|++||+++|++|+
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~-------------------~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~ 62 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTE-------------------VFGNPSSLHSFGREARKAVEEAREQIAKLLGADPE 62 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHh-------------------hcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 79999999999999999999875432 35999999999999999999999999999999999
Q ss_pred cEEEe-------------------------------ccCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhc
Q 007454 189 DYVYD-------------------------------YESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSK 237 (603)
Q Consensus 189 e~vf~-------------------------------~es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~ 237 (603)
||+|+ .||.+|....+++++.|++|.++|++ .+|.|++++|+++|++
T Consensus 63 eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~-~~G~v~~e~L~~al~~- 140 (386)
T COG1104 63 EIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVD-SNGLVDLEQLEEALRP- 140 (386)
T ss_pred eEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCC-CCCeEcHHHHHHhcCC-
Confidence 99885 25667766666677889999999999 5999999999999984
Q ss_pred CCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceE
Q 007454 238 GKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFG 316 (603)
Q Consensus 238 ~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G 316 (603)
+|.||++++++|+||++||++.|+ +|+++|+++|+||+|.+|| +|||+..+++|++++|+||++| |+|+|
T Consensus 141 -----~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gk--ipi~~~~~~vD~ls~SaHK~~G--pkGiG 211 (386)
T COG1104 141 -----DTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGK--IPIDLEELGVDLLSFSAHKFGG--PKGIG 211 (386)
T ss_pred -----CceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCc--eeccccccCcceEEeehhhccC--CCceE
Confidence 699999999999999999999875 8999999999999999999 8999999999999999999999 99999
Q ss_pred EEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhH
Q 007454 317 CLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 396 (603)
Q Consensus 317 ~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~ 396 (603)
+||+|+.+. +.|...||+.+ +. +++||.|+++|+|++
T Consensus 212 aLyv~~~~~--~~p~i~GGgQE--------------------------~g--~RsGTenv~~Ivg~~------------- 248 (386)
T COG1104 212 ALYVRPGVR--LEPLIHGGGQE--------------------------RG--LRSGTENVPGIVGFG------------- 248 (386)
T ss_pred EEEECCCCc--cCceeccCcCC--------------------------CC--CCCCCccHHHHHHHH-------------
Confidence 999988885 88888887631 12 589999999999998
Q ss_pred HHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCC
Q 007454 397 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 476 (603)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~ 476 (603)
.|++...+ .++....|++.|+++|.++|++. .|.+.+.|... .+
T Consensus 249 ---------------------------~A~~~a~~-~~~~~~~~~~~lr~~l~~~l~~~-------~p~~~~~g~~~-~r 292 (386)
T COG1104 249 ---------------------------KAAEIAVE-ELEEENARLRKLRDRLEDGLLEI-------IPDVYLNGDDE-PR 292 (386)
T ss_pred ---------------------------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhc-------CCcEEEcCCcc-cC
Confidence 46665443 57888899999999999999975 25588988752 45
Q ss_pred CCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCE
Q 007454 477 RGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITV 556 (603)
Q Consensus 477 rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (603)
-+.+++|.+++.+||. +...++.+||++|+|++|+++..+++ ++|.+|+.- .+...++
T Consensus 293 lP~~~~~~f~gv~gE~-----ll~~L~~~gI~vStGSACsS~~~~pS-----hVL~AmG~~------------~e~a~~s 350 (386)
T COG1104 293 LPNILNFSFPGVEGES-----LLLALDLAGIAVSTGSACSSGSLEPS-----HVLRAMGIS------------EELAHGS 350 (386)
T ss_pred CCCeEEEEeCCCcHHH-----HHHhccccCeEEeccccccCCCCCcc-----HHHHHcCCC------------hHHhCcc
Confidence 6889999999988764 66778999999999999999999887 899998621 2456689
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhhh
Q 007454 557 VTASLGYLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 557 VR~Slg~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
||+|||.+||+|||+++++.+.+.++..
T Consensus 351 iR~S~g~~tt~eei~~~~~~l~~~i~~l 378 (386)
T COG1104 351 IRFSLGRFTTEEEIDAAAEALKEIIKRL 378 (386)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988763
No 4
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=100.00 E-value=7.2e-58 Score=492.03 Aligned_cols=518 Identities=43% Similarity=0.687 Sum_probs=391.0
Q ss_pred hhhHhHHHhhhcccCCCCCCCCCCCChhHHHHHHHHHHhCCCCCCchhHHHHHHhhccCcCCC-CceeeecCCCCCCCHH
Q 007454 45 DCRRDFAAVTASSIFPDTQFTNHESLPSLQQSLTEFTKAYPQYFDTYQIDQIRAKEYYQLSLS-NHTCLDYFGIGLFSYN 123 (603)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~l~~~~~~F~~~~p~y~~~~~vd~iR~~efp~L~~~-~~vYLDyaa~tl~~~~ 123 (603)
.+|+. .|+++ +|+++.|+.+++||++.+|+..|+++||.|++++++|++|..+|-||+.. ..+++||++.+++++.
T Consensus 66 v~Q~r-~ril~--~f~tta~dy~v~lp~~t~al~~vae~fp~~s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~ 142 (728)
T KOG2142|consen 66 VAQVR-LRILA--LFNTTAFDYEVSLPALTEALKLVAEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYS 142 (728)
T ss_pred HHHHH-HHHHH--HhccccccccchhHHHHHHHHHHHHhCccccccccccchhhhhhcccccccceeeeeeeccceEEee
Confidence 45555 66666 79999999999999999999999999999999999999999999999643 3589999999999984
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchH-HHHHHH-HHHHHHHHcCCCCCcE-----------
Q 007454 124 QLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQE-SGLESA-MKKRIMDFLNISENDY----------- 190 (603)
Q Consensus 124 v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~-~~~~~~-aR~~Ia~~lna~~~e~----------- 190 (603)
+... ||+.-.|+++.+.+|.+.++++++.+ ...... ++.+|+++||+++++|
T Consensus 143 q~~~---------------i~~~~~~sls~~~~~ls~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrvSa 207 (728)
T KOG2142|consen 143 QTNE---------------ISDSEEFSLSESEANLSEHSLFGGAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRVSA 207 (728)
T ss_pred eeee---------------ccccccccccccccCcccchhcccchhcccccceeeeeeecccccCCceEEEEEeeccccc
Confidence 4443 45555788899999999999987665 455555 9999999999999999
Q ss_pred ------------------EEeccCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCC--CCCeeEEEEe
Q 007454 191 ------------------VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKK--KKQRGLFVFP 250 (603)
Q Consensus 191 ------------------vf~~es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~--~~~t~Lv~~~ 250 (603)
||+|++++|+||.+.|+.+|+++..+++.||...++.++|++.+..+++. ....+|++||
T Consensus 208 f~Ldaesy~f~~~~~lltiFgyetgAvlv~~r~A~~~Ggkt~sa~f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp 287 (728)
T KOG2142|consen 208 FPLDAESYPFDFNPKLLTIFGYETGAVLVMNRSAELKGGKTASAEFSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFP 287 (728)
T ss_pred ccchHhhCCCcccchheeecCCCchhhHHHhhhhHhhcCccceeecccchHHHHHHHHHHHHhhccccccchhhheeccc
Confidence 57899999999999999999999999999999999999999999875433 3358999999
Q ss_pred CccccccccccHHHHHHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCC-CCceEEEEEeCCCCcCcC
Q 007454 251 LHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGEN-PSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 251 ~~Sn~TG~~~pl~~i~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~-P~G~G~L~vkk~~~~~L~ 329 (603)
.++++||.+++|+||..+++++|||+||+.++++++|+.++++.++|||+.+|||++||.+ |+|+|||.|+|.++..|+
T Consensus 288 ~~sRvtG~~ysy~wmt~al~~~whvlLda~~lG~kdmd~yglS~f~Pdfqg~sf~fv~g~d~psgfGcl~VkKs~i~~l~ 367 (728)
T KOG2142|consen 288 TQSRVTGGMYSYSWMTLALANNWHVLLDALALGPKDMDSYGLSLFQPDFQGPSFYFVFGRDDPSGFGCLEVKKSAISGLE 367 (728)
T ss_pred hHhhhcccchhHHHHHHHHhhhHHHHHhhhccCcchHhhhhhhccCccceeeeEEEEeccCCCCceeeeeeehhhhhcee
Confidence 9999999999999999999999999999999999999999999999999999999999988 999999999999987776
Q ss_pred CCCC---C-Cceecccccccccccccc-----------------CC---------------CCCCcc--cCccccccccc
Q 007454 330 DNTS---S-GMVSLLPAKKQLWLTDEF-----------------SS---------------CETEPE--QTSKSKQEKVA 371 (603)
Q Consensus 330 p~~~---g-G~v~~~~~~~~~~~~~~~-----------------~~---------------~~~e~~--~~~~~~~~~e~ 371 (603)
.... + |+++..|.-.... ..++ ++ +-++++ .+.|.+.+.|+
T Consensus 368 lrtGcfcn~Gack~~pgl~~~~-~~~~~~~g~~cgD~dg~~~s~~~~~~~~~~a~~~~~v~~~~~T~~lm~~~~~se~e~ 446 (728)
T KOG2142|consen 368 LRTGCFCNIGACKIYPGLYLEM-SQKGLSAGKGCGDNDGQPVSGYMQTPADVGAYLSAQVSDVLETDPLMKSPVFSEQED 446 (728)
T ss_pred ccCCCCCCCcceeecccccHHH-HHHHhhhccccccCCCCcccccccchhhhhHHHHHhhhhhhhccccccccccchhhh
Confidence 4432 4 8887766311000 0000 00 000000 00111111122
Q ss_pred CCCChhhhhhhh---hh---h--cCc---cccchhHHHhhh---------------------------------------
Q 007454 372 ATNTFSGPMSIE---MR---Q--SGK---LEQGEISEVRRA--------------------------------------- 401 (603)
Q Consensus 372 GT~n~~gi~gl~---~~---~--~~~---~~~~~i~~~~~~--------------------------------------- 401 (603)
+-+....++..- +| . ..| -...||...+..
T Consensus 447 ~~n~~a~Pl~~~~~~~R~~d~~~~s~~~~~~~~EI~~~~~~~~gl~~~~s~m~~~~~~~alr~etE~e~~Li~~~~~~~~ 526 (728)
T KOG2142|consen 447 SDNGIATPLLERVQLKRHFDAAVASYPIKCAAFEIEEENSGSQGLKYDRSWMSVDMNGSALRQETESELCLIGPRIKVQE 526 (728)
T ss_pred ccccccCCcchhhcccchhhhhhhhhhhhhceeEeeccCccccccccccccccccccccceeeecccceeeeccccchhh
Confidence 222111111100 00 0 000 011122111100
Q ss_pred --------hh-hhhhhhc--cCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCC--CCceEEE
Q 007454 402 --------EA-DSIQQKN--ANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTE--GNALVKI 468 (603)
Q Consensus 402 --------~~-~~~~~~~--~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~--g~plv~I 468 (603)
.| .+|+.+. .-.. ...+ +|.+||+.+++|+..+.+|.++|++||+..|..+.|+.+. -+++|+|
T Consensus 527 d~~~~~~vs~~~sl~~~~a~~~s~-~d~~--~c~~iDh~~~lgln~t~~r~r~ll~wl~~sl~~~~~~~~~~~~~nlvq~ 603 (728)
T KOG2142|consen 527 DEQSERRVSFPTSLEQGEASKCSS-YDCP--PCRGIDHVDSLGLNLTTNRGRELLNWLVQSLRNLQHSESSSTTVNLVQI 603 (728)
T ss_pred hcccceeecchhhhhhhhhhhccc-ccCc--cccccchhhhhhHHhhhhhhhhHHHHHHHhcccccccccccccccceee
Confidence 00 0111100 0000 0111 2789999999999999999999999999999887766433 3589999
Q ss_pred eCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccccccccccc
Q 007454 469 YGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKD 548 (603)
Q Consensus 469 ygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 548 (603)
|||+.+.+||+.++||++|+.++.++|.+|++++++++|.++.++.-++.+.++--......+..... ..
T Consensus 604 ygpk~~~erG~~~~fnl~d~~~~fr~p~IV~~lae~E~isl~~~~l~~iri~dp~~r~~dq~~~~r~~-----~~----- 673 (728)
T KOG2142|consen 604 YGPKTKYERGPAVAFNLFDLSKRFRAPIIVNKLAEREEISLGELSLGHIRIQDPCHRDIDQLLGQRRG-----RT----- 673 (728)
T ss_pred ecCccccccChhheeehhhhhccccchhhhcchhhhhcccccceeeeeeEEecCcchhhhHHhhhhcc-----cc-----
Confidence 99999999999999999999999999999999999999999999999998877320011111211110 00
Q ss_pred CCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhhhhcccccccc
Q 007454 549 KANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADFVEKARWRYT 594 (603)
Q Consensus 549 ~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~f~~~~~~~~~ 594 (603)
.+..+..+||+++||.+|+|||+++|+|+++||+++|++++.||-.
T Consensus 674 ~~~~Rl~vvt~~lgfltnfedv~K~w~fv~~fl~pgf~~~~~~~~~ 719 (728)
T KOG2142|consen 674 NGESRLSVVTARLGFLTNFEDVYKLWEFVARFLDPGFVEKVELRTV 719 (728)
T ss_pred ccceeEeeeeeehhhhhchHHHHHHHHHHHHhcChhhhhhccccch
Confidence 1345667999999999999999999999999999999999999965
No 5
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=7.4e-47 Score=409.72 Aligned_cols=362 Identities=19% Similarity=0.245 Sum_probs=284.2
Q ss_pred hHHHHHHhhccCcCC----CCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCc-cccccc
Q 007454 92 QIDQIRAKEYYQLSL----SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGG 166 (603)
Q Consensus 92 ~vd~iR~~efp~L~~----~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s-~~~~g~ 166 (603)
+++.+|+ +||.+.. .+.||||||+++|+|++|++++.+++.. ..+|+++ .+..+.
T Consensus 4 ~~~~~r~-~fp~~~~~~~~~~~iYld~a~~~~~~~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~ 63 (406)
T PRK09295 4 SVEKVRA-DFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRH-------------------GYAAVHRGIHTLSA 63 (406)
T ss_pred ChHHHHh-hCccccCcCCCCceEEEeCcccccCCHHHHHHHHHHHHh-------------------cCCCCCCcccHHHH
Confidence 5678998 6999942 1479999999999999999998776431 1256543 333455
Q ss_pred hHHHHHHHHHHHHHHHcCC-CCCcEEEecc-----------------------------Cch-HHHHHHHHHHcCCEEEE
Q 007454 167 QESGLESAMKKRIMDFLNI-SENDYVYDYE-----------------------------SEA-VEAMIRTSEKRGARVMS 215 (603)
Q Consensus 167 ~~~~~~~~aR~~Ia~~lna-~~~e~vf~~e-----------------------------s~s-V~~~~~~a~~~Ga~V~~ 215 (603)
.+.+.++++|+.|++++|+ ++++++|+.. |.+ ...+...+++.|++++.
T Consensus 64 ~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 143 (406)
T PRK09295 64 QATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRV 143 (406)
T ss_pred HHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEE
Confidence 6788999999999999998 6789977532 111 22234556778999999
Q ss_pred EeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCC
Q 007454 216 AEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSL 294 (603)
Q Consensus 216 ~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~ 294 (603)
++++ +++.++.++|+++|.+ +|+||++++++|.||.++|++.| ++||++|+++++|++|..++ .++|+..
T Consensus 144 v~~~-~~~~~d~~~l~~~i~~------~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~--~~~~~~~ 214 (406)
T PRK09295 144 IPLN-PDGTLQLETLPALFDE------RTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMH--HPVDVQA 214 (406)
T ss_pred EecC-CCCCCCHHHHHHhcCC------CcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCc--cccCchh
Confidence 9988 4788999999998863 68999999999999999999855 68999999999999999998 7999999
Q ss_pred CCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCC
Q 007454 295 VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATN 374 (603)
Q Consensus 295 ~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~ 374 (603)
+++||+++|+||+|| |.|+|+||++++.++.++|...||+..........+. +. ..+.+ +|.||+
T Consensus 215 ~~~D~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~---~~~~r--~e~GT~ 279 (406)
T PRK09295 215 LDCDFYVFSGHKLYG--PTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTT--------WA---KAPWR--FEAGTP 279 (406)
T ss_pred cCCCEEEeehhhccC--CCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccc--------cC---Cchhh--cCCCCc
Confidence 999999999999999 8999999999998877866544443311100000000 00 01234 789999
Q ss_pred ChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Q 007454 375 TFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMK 454 (603)
Q Consensus 375 n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~ 454 (603)
|+.+++++. .|++++.++|++++.+|.+.|+++|+++|++
T Consensus 280 ~~~~~~~l~----------------------------------------~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 319 (406)
T PRK09295 280 NTGGIIGLG----------------------------------------AALDYVSALGLNNIAEYEQNLMHYALSQLES 319 (406)
T ss_pred cHHHHHHHH----------------------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 999999987 6999999999999999999999999999987
Q ss_pred CCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhh
Q 007454 455 LQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKT 534 (603)
Q Consensus 455 L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~ 534 (603)
++ .+++++|. +|.++|+|++++. .+..+.+.++++||.+|+|++|+.+. +..+
T Consensus 320 ~~--------~~~~~~~~---~~~~iv~~~~~~~-----~~~~~~~~L~~~gI~v~~g~~c~~~~-----------~~~~ 372 (406)
T PRK09295 320 VP--------DLTLYGPQ---NRLGVIAFNLGKH-----HAYDVGSFLDNYGIAVRTGHHCAMPL-----------MAYY 372 (406)
T ss_pred CC--------CEEEeCCC---CCceEEEEEECCc-----CHHHHHHHHHhCCeEEeccccchHHH-----------HHHH
Confidence 63 38999974 4789999999874 34456666788999999999998542 2121
Q ss_pred hcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 007454 535 DREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l 581 (603)
.. .+.||+|+|+|||+||||+|+++|+++.
T Consensus 373 ----------------~~-~~~iRiS~~~ynt~~did~l~~~l~~i~ 402 (406)
T PRK09295 373 ----------------NV-PAMCRASLAMYNTHEEVDRLVAGLQRIH 402 (406)
T ss_pred ----------------CC-CCEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 11 2689999999999999999999998864
No 6
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=9.3e-46 Score=390.04 Aligned_cols=353 Identities=18% Similarity=0.181 Sum_probs=287.5
Q ss_pred CCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCC
Q 007454 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (603)
Q Consensus 107 ~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~ 186 (603)
.+.+|||+.+++|.++.|++++..|+.. .++|||+. .||+++...++++|+.||+|+||+
T Consensus 42 ~~~vyld~~at~p~~~~Vldam~~~~~~-------------------~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd 101 (428)
T KOG1549|consen 42 TRPVYLDNQATGPMDPRVLDAMLPYLLE-------------------YLGNPHSR-SYGWKAEDAVEAAREQVAKLINAD 101 (428)
T ss_pred CccEEEecCcCCCCCHHHHHHHHHHHHH-------------------hhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCC
Confidence 5689999999999999999999876432 34899999 789999899999999999999999
Q ss_pred CCcEEEe------------------------------ccCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhh
Q 007454 187 ENDYVYD------------------------------YESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVS 236 (603)
Q Consensus 187 ~~e~vf~------------------------------~es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~ 236 (603)
+.||+|+ .||.+|.-..+.+++.|++|+++|++ .++.++.++|++.|+.
T Consensus 102 ~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~ 180 (428)
T KOG1549|consen 102 PSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE-DSGLVDISKLREAIRS 180 (428)
T ss_pred CCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC-ccccccHHHHHHhcCC
Confidence 9999884 24556666677888999999999999 7899999999999985
Q ss_pred cCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCce
Q 007454 237 KGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGF 315 (603)
Q Consensus 237 ~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~ 315 (603)
+|+||++++++|++|+++|+++|. +|++.|++||+||||.+|| .++|++++++||+++|+||||| |+|+
T Consensus 181 ------~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~--i~vDV~eln~D~~s~s~HK~yg--p~~i 250 (428)
T KOG1549|consen 181 ------KTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGK--IPVDVQELNADFLSISAHKIYG--PPGI 250 (428)
T ss_pred ------CceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCC--ccccHHHcCchheeeecccccC--CCcc
Confidence 799999999999999999999765 8999999999999999999 8999999999999999999999 8889
Q ss_pred EEEEEeCCC-CcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccch
Q 007454 316 GCLFVKKST-VPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 394 (603)
Q Consensus 316 G~L~vkk~~-~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~ 394 (603)
|+||||+.. .-.+.|++.||... +. +++||.+.+.+++++
T Consensus 251 GaLYvr~~~~~~~~~p~~~GGgq~--------------------------r~--~rsGT~~~~~~~~~g----------- 291 (428)
T KOG1549|consen 251 GALYVRRKRPRLRVEPPLSGGGQE--------------------------RG--LRSGTVATPLAVGLG----------- 291 (428)
T ss_pred eEEEEccCCCcccccCcccCCccc--------------------------cc--cccCCcCchhhhhhH-----------
Confidence 999999822 22355777776521 12 689999999999998
Q ss_pred hHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCceEEEeCCCC
Q 007454 395 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMK-LQHPNTEGNALVKIYGPKI 473 (603)
Q Consensus 395 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~-L~h~~~~g~plv~Iygp~~ 473 (603)
.|.+++.+ .+..+..+.+.+...|..++.+ +. -+.++|+..
T Consensus 292 -----------------------------sA~e~~~~-~~~~~~~~~~~~~~~ll~~i~~~~~--------~~~~~G~~~ 333 (428)
T KOG1549|consen 292 -----------------------------SAAEFVNK-EMAYDEAIIKRLSEKLLMGIGQSLP--------EVTLNGSGK 333 (428)
T ss_pred -----------------------------HHHHHHHh-hcchhHHHHHHHHHHHHHHHhhhCc--------hhhccCCcc
Confidence 58888766 3455566666688888888765 32 277889763
Q ss_pred CCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCC
Q 007454 474 RFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLG 553 (603)
Q Consensus 474 ~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 553 (603)
...++.++|+++-..|+.+ +.+...|.+|+|.+|......++ -++.+.+.+ ....
T Consensus 334 -~~~~~~~~~~~~~~~g~~~-------~~~~~~~~l~s~~a~~~~~~eps-----y~l~~~G~~------------~~~~ 388 (428)
T KOG1549|consen 334 -SRYPGLVSLSFPYVEGESL-------LMDLKDVALSSGSACTSASLEPS-----YVLRAIGVD------------EDLA 388 (428)
T ss_pred -cccccceeeecccccCcch-------hhhhhhhhhcccchhhcCCCCcc-----hhhhhcCcc------------hhhh
Confidence 5679999999996666542 44567899999999987754443 344333211 2345
Q ss_pred CCEEEEecCCCCCHHHHHHHHHHHHHHHhhhhhcccccc
Q 007454 554 ITVVTASLGYLANFEDVYRLWAFVAQFLDADFVEKARWR 592 (603)
Q Consensus 554 ~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~f~~~~~~~ 592 (603)
...||+|+|.|||.+||+++++.++++....|--...|.
T Consensus 389 ~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~~s~l~~ 427 (428)
T KOG1549|consen 389 HSSIRISIGRYTTEEDIDYLVDAIKKLVSLLREMSPLWE 427 (428)
T ss_pred cceeEEeeeeeCcHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 579999999999999999999999999877665555553
No 7
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=1.5e-44 Score=386.17 Aligned_cols=332 Identities=14% Similarity=0.112 Sum_probs=265.4
Q ss_pred eeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCc-cccccchHHHHHHHHHHHHHHHcCCCCC
Q 007454 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESGLESAMKKRIMDFLNISEN 188 (603)
Q Consensus 110 vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s-~~~~g~~~~~~~~~aR~~Ia~~lna~~~ 188 (603)
|||||+|++++|+.|++++.+++.. .++||++ .+.++....+.++++|++|++++|++++
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~ 61 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLIE-------------------HFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK 61 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHh-------------------CCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 6999999999999999998775421 2367776 4444556678899999999999999999
Q ss_pred cEEEecc-----------------------------CchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCC
Q 007454 189 DYVYDYE-----------------------------SEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGK 239 (603)
Q Consensus 189 e~vf~~e-----------------------------s~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~ 239 (603)
+++|+.. |.++......+++.|++++.+++++ ++.++.++|++.|.+
T Consensus 62 ~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~--- 137 (364)
T PLN02651 62 EIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS-DGLVDLDELAAAIRP--- 137 (364)
T ss_pred eEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCC-CCcCCHHHHHHhcCC---
Confidence 9987532 2222111222346799999999884 788999999999963
Q ss_pred CCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEE
Q 007454 240 KKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCL 318 (603)
Q Consensus 240 ~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L 318 (603)
+|+|+++++++|+||.++|++.| ++||++|++++||++|.+|+ .++|++.+++||+++|+|||+| |.|+|+|
T Consensus 138 ---~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~--~~~~~~~~~~D~~~~s~hK~~g--p~G~g~l 210 (364)
T PLN02651 138 ---DTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGK--IPVDVDDLGVDLMSISGHKIYG--PKGVGAL 210 (364)
T ss_pred ---CcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCC--cccCcccCCCCEEEechhhhCC--CCceEEE
Confidence 68999999999999999999966 58999999999999999998 7999999999999999999977 9999999
Q ss_pred EEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHH
Q 007454 319 FVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEV 398 (603)
Q Consensus 319 ~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~ 398 (603)
|+|++....+.|...||... .+ ++.||+|+++++++.
T Consensus 211 ~v~~~~~~~l~p~~~g~~~~--------------------------~~--~~~GT~~~~~~~~l~--------------- 247 (364)
T PLN02651 211 YVRRRPRVRLEPLMSGGGQE--------------------------RG--RRSGTENTPLVVGLG--------------- 247 (364)
T ss_pred EEcCCCCCCCCccccCCCcc--------------------------CC--ccCCCccHHHHHHHH---------------
Confidence 99999888888877664310 11 579999999999988
Q ss_pred hhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCC-CC
Q 007454 399 RRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRF-DR 477 (603)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~-~r 477 (603)
++++++.+ +++++.+|.+.|.++|++.|+++ .|.++|+||.... ++
T Consensus 248 -------------------------~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~-------~~~~~i~~~~~~~~~~ 294 (364)
T PLN02651 248 -------------------------AACELAMK-EMDYDEKHMKALRERLLNGLRAK-------LGGVRVNGPRDPEKRY 294 (364)
T ss_pred -------------------------HHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhh-------CCCEEEECCCCcccCc
Confidence 69999887 56999999999999999999862 1238999985433 34
Q ss_pred CCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEE
Q 007454 478 GPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVV 557 (603)
Q Consensus 478 g~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~V 557 (603)
++|++|++++.+ ++.|.+.++. |.+|+|++|+.+....+ +++++++.. .....|+|
T Consensus 295 ~~i~~~~~~~~~-----~~~~~~~L~~--i~v~~g~~c~~~~~~~~-----~~~~~~g~~------------~~~~~~~v 350 (364)
T PLN02651 295 PGTLNLSFAYVE-----GESLLMGLKE--VAVSSGSACTSASLEPS-----YVLRALGVP------------EEMAHGSL 350 (364)
T ss_pred CCEEEEEeCCCC-----HHHHHHHhCC--EEEEchhhcCCCCCCcC-----HHHHHcCCC------------hHHhCceE
Confidence 789999998754 3445544443 99999999999876654 667666410 11234799
Q ss_pred EEecCCCCCHHHHH
Q 007454 558 TASLGYLANFEDVY 571 (603)
Q Consensus 558 R~Slg~~tt~eDVd 571 (603)
|+|||+|||+||||
T Consensus 351 R~S~~~~~t~~did 364 (364)
T PLN02651 351 RLGVGRFTTEEEVD 364 (364)
T ss_pred EEEcCCCCCHHHcC
Confidence 99999999999986
No 8
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=3.5e-44 Score=391.06 Aligned_cols=363 Identities=18% Similarity=0.218 Sum_probs=278.6
Q ss_pred HHHHhhccCcCC----CCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCcc-ccccchHH
Q 007454 95 QIRAKEYYQLSL----SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQ-LLHGGQES 169 (603)
Q Consensus 95 ~iR~~efp~L~~----~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~-~~~g~~~~ 169 (603)
.+|+ +||.++. .+.+||||++++++|+.|++++.+++.. ..+|+++. +..+....
T Consensus 16 ~~r~-~fp~~~~~~~~~~~iyLd~a~~~~~p~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~ 75 (424)
T PLN02855 16 ETRP-DFPILDQTVNGSKLVYLDNAATSQKPAAVLDALQDYYEE-------------------YNSNVHRGIHALSAKAT 75 (424)
T ss_pred HHHH-hCchhccccCCCCeEEeeCccccCCCHHHHHHHHHHHHh-------------------cCCCCCCccchHHHHHH
Confidence 4676 6999842 2479999999999999999998775432 12454432 22234456
Q ss_pred HHHHHHHHHHHHHcCCC-CCcEEEecc-----------------------------CchH-HHHHHHHHHcCCEEEEEec
Q 007454 170 GLESAMKKRIMDFLNIS-ENDYVYDYE-----------------------------SEAV-EAMIRTSEKRGARVMSAEF 218 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~-~~e~vf~~e-----------------------------s~sV-~~~~~~a~~~Ga~V~~~~~ 218 (603)
+.++++|+.|++++|++ +++++|+.. |.+. ..+...+++.|++++.+++
T Consensus 76 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~ 155 (424)
T PLN02855 76 DAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGL 155 (424)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEec
Confidence 78899999999999996 578977532 2221 2234456778999999998
Q ss_pred cCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 007454 219 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRP 297 (603)
Q Consensus 219 ~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~ 297 (603)
++ ++.++.++|++.|.. +|+||++++++|.||.++|++.| ++|+++|++|++|++|+.|+ .++|+..+++
T Consensus 156 ~~-~~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~--~~~~~~~~~~ 226 (424)
T PLN02855 156 TP-DEVLDVEQLKELLSE------KTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPH--MPVDVQTLGA 226 (424)
T ss_pred CC-CCCcCHHHHHHHhcc------CceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCC--cCCCchhcCC
Confidence 74 566899999999863 68999999999999999999865 58999999999999999998 7899999999
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 298 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
||+++|+||++| |.|+|+||++++.++.++|...||...... ... + . .+. ..+++ +|.||+|++
T Consensus 227 d~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~p~~~g~~~~~~~-~~~-~---~----~~~---~~~~r--~e~GT~~~~ 290 (424)
T PLN02855 227 DFLVASSHKMCG--PTGIGFLWGKSDLLESMPPFLGGGEMISDV-FLD-H---S----TYA---PPPSR--FEAGTPAIG 290 (424)
T ss_pred CEEEeecccccC--CCccEEEEEchhhhhcCCCEecCCCceeee-ecC-c---c----ccC---CChhh--ccCCChHHH
Confidence 999999999988 889999999999988887655454321100 000 0 0 000 01234 789999999
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
+++++. .+++++.++|+++|.+|++.|.++|++.|++++
T Consensus 291 ~~~~l~----------------------------------------~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~- 329 (424)
T PLN02855 291 EAIGLG----------------------------------------AAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVP- 329 (424)
T ss_pred HHHHHH----------------------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 999987 699999999999999999999999999998763
Q ss_pred CCCCCCceEEEeCCCC--CCCCCCEEEEEEccCCCCccCHHHHHHHHhc-CCcEEeeCcccCccCCchhhhhhHHHHHhh
Q 007454 458 PNTEGNALVKIYGPKI--RFDRGPALAFNVFDWKREKIEPVLVQKLADR-ENISLSYGSLHHIWFSDKYQKEKDNVLEKT 534 (603)
Q Consensus 458 ~~~~g~plv~Iygp~~--~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~-~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~ 534 (603)
.+++|||.. ...|+++++|++++.+ +..|.+.++. +||.+|+|++|+.+.. ..+
T Consensus 330 -------g~~i~~~~~~~~~~r~~~v~~~~~~~~-----~~~v~~~L~~~~gI~v~~g~~c~~~~~-----------~~~ 386 (424)
T PLN02855 330 -------GVRIYGPKPSEGVGRAALCAFNVEGIH-----PTDLSTFLDQQHGVAIRSGHHCAQPLH-----------RYL 386 (424)
T ss_pred -------CEEEeCCCcccccCcccEEEEEECCcC-----HHHHHHHhcccCCEEEechhhhhHHHH-----------HHh
Confidence 389999753 2357899999998743 3445555544 4999999999985321 111
Q ss_pred hcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 535 DREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+. .+.||+|+|+|||++||++|+++|++++..
T Consensus 387 ----------------g~-~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 387 ----------------GV-NASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred ----------------CC-CCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 11 258999999999999999999999998754
No 9
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=2.4e-43 Score=378.28 Aligned_cols=342 Identities=19% Similarity=0.185 Sum_probs=275.2
Q ss_pred eeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCCCCc
Q 007454 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEND 189 (603)
Q Consensus 110 vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~~~e 189 (603)
|||||+|++|+++.|++++.+++.. ..+||++.+..+....+.++++|+.+++++|+++++
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~ 61 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTE-------------------YFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDE 61 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHh-------------------cCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 6999999999999999998875431 236777655455667788999999999999999989
Q ss_pred EEEec----------------------------cCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCC
Q 007454 190 YVYDY----------------------------ESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKK 241 (603)
Q Consensus 190 ~vf~~----------------------------es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~ 241 (603)
++|+. ++.++......+++.|++|..+++++ ++.++.++|++.|.+
T Consensus 62 i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~g~~~~~~l~~~i~~----- 135 (379)
T TIGR03402 62 IIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE-EGRLDLEELRAAITD----- 135 (379)
T ss_pred EEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC-CCcCCHHHHHHhcCC-----
Confidence 87742 22333333344556899999999874 788999999999863
Q ss_pred CCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 007454 242 KQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFV 320 (603)
Q Consensus 242 ~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~v 320 (603)
+++|+++++.+|.||.++|++.| ++||++|+++++|++|.+|+ .++|+..+++||+++|+||++| |.|+|+||+
T Consensus 136 -~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~--~~~~~~~~~~D~~~~s~~K~~g--p~G~g~l~v 210 (379)
T TIGR03402 136 -DTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGK--IPIDLKEMNIDMLSLSGHKLHG--PKGVGALYI 210 (379)
T ss_pred -CcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccc--cccCcccCCCCEEEEcHHHcCC--CCceEEEEE
Confidence 68999999999999999999966 48999999999999999998 7999999999999999999888 999999999
Q ss_pred eCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhh
Q 007454 321 KKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRR 400 (603)
Q Consensus 321 kk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~ 400 (603)
|++.. +.|...||... .. ++.||+|+++++++.
T Consensus 211 ~~~~~--~~p~~~g~~~~--------------------------~~--~~~gt~~~~~~~~l~----------------- 243 (379)
T TIGR03402 211 RKGTR--FRPLLRGGHQE--------------------------RG--RRAGTENVPGIVGLG----------------- 243 (379)
T ss_pred CCCCC--CCCcccCCccC--------------------------CC--cCCCCccHHHHHHHH-----------------
Confidence 98763 66665554310 11 468999999999987
Q ss_pred hhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCceEEEeCCCCCCCCCC
Q 007454 401 AEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMK-LQHPNTEGNALVKIYGPKIRFDRGP 479 (603)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~-L~h~~~~g~plv~Iygp~~~~~rg~ 479 (603)
++++++.+ .++.+.+|.+.|.++|.++|++ ++ .++++|+.. ...++
T Consensus 244 -----------------------~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~--------~~~~~~~~~-~~~~~ 290 (379)
T TIGR03402 244 -----------------------KAAELATE-HLEEENTRVRALRDRLEAGLLARIP--------DARLNGDPT-KRLPN 290 (379)
T ss_pred -----------------------HHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCC--------CEEEeCCCc-cCCCC
Confidence 68888876 6888999999999999999985 53 388999753 23357
Q ss_pred EEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEE
Q 007454 480 ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTA 559 (603)
Q Consensus 480 ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~ 559 (603)
+++|++++.+ +..|...++++||.+++|++|+.+....+ +++++++. . .....++||+
T Consensus 291 ~~~~~~~~~~-----~~~~~~~l~~~gI~v~~g~~c~~~~~~~~-----~~~~~lg~-~-----------~~~~~~~vR~ 348 (379)
T TIGR03402 291 TVNISFEYIE-----GEAILLLLDMEGICASSGSACTSGSLEPS-----HVLRAMGV-P-----------HTAAHGSIRF 348 (379)
T ss_pred EEEEEecCCC-----HHHHHHhhccCCEEEEchhhcCCCCCCcC-----HHHHHcCC-C-----------hhhcCceEEE
Confidence 9999998754 44566666889999999999999877654 55555531 0 1223479999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 560 SLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 560 Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
|+|+|||.|||++|++.|++.++.
T Consensus 349 S~~~~~t~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 349 SLSRYNTEEDIDYVLEVLPPIIAR 372 (379)
T ss_pred EcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998765
No 10
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=8.8e-45 Score=388.59 Aligned_cols=338 Identities=21% Similarity=0.263 Sum_probs=262.6
Q ss_pred eeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCcccc-ccchHHHHHHHHHHHHHHHcCCCC-
Q 007454 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLL-HGGQESGLESAMKKRIMDFLNISE- 187 (603)
Q Consensus 110 vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~-~g~~~~~~~~~aR~~Ia~~lna~~- 187 (603)
||||++|++++|+.|++++.+++.. ..+|+++... .+....++++++|++|++++|+++
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~ 61 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLRN-------------------FYANPHSGVSHRSREFAEILEEAREALAKLLGAPPD 61 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHHH-------------------SGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT
T ss_pred CEeeCCCccCCCHHHHHHHHHHHHH-------------------hhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccc
Confidence 7999999999999999998875431 2356644322 345568899999999999999999
Q ss_pred CcEEEe----------------------------ccCchHH-HHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcC
Q 007454 188 NDYVYD----------------------------YESEAVE-AMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKG 238 (603)
Q Consensus 188 ~e~vf~----------------------------~es~sV~-~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~ 238 (603)
++++|. .++.+.. .+...+++.|++|.+++++ .++.++.+++++.|..
T Consensus 62 ~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~-~~~~~~~~~~~~~l~~-- 138 (371)
T PF00266_consen 62 EEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPAD-PGGSLDLEDLEEALNP-- 138 (371)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEG-TTSSCSHHHHHHHHHT--
T ss_pred cccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccccc-ccchhhhhhhhhhhcc--
Confidence 788764 2334444 2345566899999999998 4789999999999973
Q ss_pred CCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEE
Q 007454 239 KKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGC 317 (603)
Q Consensus 239 ~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~ 317 (603)
+++||++++++|.||.++|++.|. +||++|+++++||+|++|. .++|++++++||+++|+||++| |.|+|+
T Consensus 139 ----~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~--~~id~~~~~~D~~~~s~~Kl~g--p~G~g~ 210 (371)
T PF00266_consen 139 ----DTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGC--VPIDLDELGADFLVFSSHKLGG--PPGLGF 210 (371)
T ss_dssp ----TESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTT--SS--TTTTTESEEEEESTSTTS--SSTEEE
T ss_pred ----ccceEEeecccccccEEeeeceehhhhhccCCceeEechhcccc--ccccccccccceeeecccccCC--CCchhh
Confidence 799999999999999999999775 8999999999999999999 7999999999999999999556 899999
Q ss_pred EEEeCCCCcCcCCCCCCC-ceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhH
Q 007454 318 LFVKKSTVPILVDNTSSG-MVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 396 (603)
Q Consensus 318 L~vkk~~~~~L~p~~~gG-~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~ 396 (603)
||+|++..+.++|...|| +...... ..+...+ .+.+ ++.||+|+..++++.
T Consensus 211 l~v~~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~-----------~~~~--~~~GT~~~~~~~~l~------------- 262 (371)
T PF00266_consen 211 LYVRPEAIERLRPAKPGGGYLDFPSL--QEYGLAD-----------DARR--FEGGTPNVPAIYALN------------- 262 (371)
T ss_dssp EEEEHHHHHHHHTSSSSSSTTTHHHH--HHHCHHS-----------TTTG--SSSSS--HHHHHHHH-------------
T ss_pred heehhhhhhccccccccccccccccc--hhccccc-----------cccc--ccccceeeehhhhHH-------------
Confidence 999999998888877774 3321111 1110000 1233 689999999999987
Q ss_pred HHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCC
Q 007454 397 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 476 (603)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~ 476 (603)
.++++++++|+++|.+|...|.+++.+.|.+++ .++++||.....
T Consensus 263 ---------------------------~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~--------~~~~~~~~~~~~ 307 (371)
T PF00266_consen 263 ---------------------------EALKLLEEIGIERIRERIRELAEYLREALEELP--------GIEVLGPDDEPR 307 (371)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------TEEESSSSCGGB
T ss_pred ---------------------------HHHhhhhccccccchhhhhhHHHHHHhhhhcCC--------ceeEeeeccccc
Confidence 699999999999999999999999999999874 389999866667
Q ss_pred CCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCE
Q 007454 477 RGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITV 556 (603)
Q Consensus 477 rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (603)
++++++|++++.++ ..+.+.++++||.+++|++|+..... .+ .. .++
T Consensus 308 ~~~i~~~~~~~~~~-----~~~~~~L~~~~I~~~~G~~~~~~~~~--------~~-------------------~~-~~~ 354 (371)
T PF00266_consen 308 RPSIVSFNLPGSDA-----DDVVKYLEERGIAVSTGSACAGPSLD--------IL-------------------GM-GGV 354 (371)
T ss_dssp GTTEEEEEETTSSH-----HHHHHHHHHHTEEEEESTTTCHHHHH--------HH-------------------HT-TTE
T ss_pred ccceEEEeecCCCH-----HHHHHHHhhcCEEEeccCcccHHHHH--------Hh-------------------CC-CCE
Confidence 89999999988654 44555555559999999999832211 11 01 179
Q ss_pred EEEecCCCCCHHHHHHH
Q 007454 557 VTASLGYLANFEDVYRL 573 (603)
Q Consensus 557 VR~Slg~~tt~eDVd~l 573 (603)
||+|+|+|||+||||+|
T Consensus 355 iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 355 IRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEEE-GTTSSHHHHHHH
T ss_pred EEEeccCCCCHHHHhhC
Confidence 99999999999999987
No 11
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=2.7e-43 Score=380.57 Aligned_cols=361 Identities=15% Similarity=0.180 Sum_probs=280.3
Q ss_pred hHHHHHHhhccCcCCCCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCc-cccccchHHH
Q 007454 92 QIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESG 170 (603)
Q Consensus 92 ~vd~iR~~efp~L~~~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s-~~~~g~~~~~ 170 (603)
+++++|+ +||.|. ++.|||||++++|+|+.+++++.+++.. ..+|++. .+..+....+
T Consensus 2 ~~~~~r~-~fp~l~-~~~iyld~a~~~~~p~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~ 60 (398)
T TIGR03392 2 NPAQFRQ-QFPALQ-DGTVYLDSAATALKPQAVIDATQQFYRL-------------------SSGTVHRSQHQQAQSLTA 60 (398)
T ss_pred ChhHHHH-hCCccC-CCeEEeeCccccCCCHHHHHHHHHHHHh-------------------cCCCCCCcccHHHHHHHH
Confidence 4678888 699984 4689999999999999999998775431 1255543 2323445678
Q ss_pred HHHHHHHHHHHHcCCC-CCcEEEecc-----------------------------Cch-HHHHHHHHHHcCCEEEEEecc
Q 007454 171 LESAMKKRIMDFLNIS-ENDYVYDYE-----------------------------SEA-VEAMIRTSEKRGARVMSAEFS 219 (603)
Q Consensus 171 ~~~~aR~~Ia~~lna~-~~e~vf~~e-----------------------------s~s-V~~~~~~a~~~Ga~V~~~~~~ 219 (603)
.++++|+.|++++|++ +++++|+.. +.+ ...+...+++.|++++.++++
T Consensus 61 ~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 140 (398)
T TIGR03392 61 RYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG 140 (398)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC
Confidence 8999999999999995 788876421 112 122345567889999999987
Q ss_pred CCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 007454 220 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPD 298 (603)
Q Consensus 220 ~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~D 298 (603)
. ++.++.++|+++|.+ +|+||++++.+|.||.++|++.| ++||++|+++++|++|..++ .++|++.+++|
T Consensus 141 ~-~~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~--~~~~~~~~~~d 211 (398)
T TIGR03392 141 A-DLLPDIRQLPELLTP------RTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVH--GPPDVQALDID 211 (398)
T ss_pred C-CCCcCHHHHHHHhcc------CceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCC--CCCChhhcCCC
Confidence 3 677899999998863 68999999999999999999966 58999999999999999998 68999999999
Q ss_pred EEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhh
Q 007454 299 FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 378 (603)
Q Consensus 299 flv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~g 378 (603)
|+++|+||+|| |.|+|+||++++.++.+.|...||........ ..+...+ .+.+ +|.||+|+++
T Consensus 212 ~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~~~~--~e~GT~~~~~ 275 (398)
T TIGR03392 212 FYAFSGHKLYG--PTGIGVLYGKTELLEAMPPWQGGGKMLSHVSF-DGFIPQA-----------VPHR--FEAGTPNIAG 275 (398)
T ss_pred EEEEecccccC--CCceEEEEEcHHHHhhCCCeecCCceEeeccc-cccccCC-----------Chhh--ccCCCCCHHH
Confidence 99999999999 88999999999988778664433332110000 0010000 1344 7899999999
Q ss_pred hhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 007454 379 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHP 458 (603)
Q Consensus 379 i~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~ 458 (603)
++++. +|++++.++|++++.+|.+.|+++|.+.|.+++
T Consensus 276 ~~a~~----------------------------------------~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~-- 313 (398)
T TIGR03392 276 VIGLS----------------------------------------AALEWLTDIDIAAAEAWSVSLADLAEERLAQLP-- 313 (398)
T ss_pred HHHHH----------------------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 99987 699999899999999999999999999998763
Q ss_pred CCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccc
Q 007454 459 NTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREA 538 (603)
Q Consensus 459 ~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~ 538 (603)
.++++++. ..++++|++++.+ .+.+.+.++++||.++.|++|+.. ++..++
T Consensus 314 ------g~~~~~~~----~~~i~~~~~~~~~-----~~~l~~~L~~~gI~v~~g~~~~~~-----------~~~~~g--- 364 (398)
T TIGR03392 314 ------GFRSFRCP----GSSLLAFDFAGVH-----HSDLAALLAESGIALRAGQHCAQP-----------LMAALG--- 364 (398)
T ss_pred ------CeEEeCCC----CCcEEEEEeCCcC-----HHHHHHHHHhCCEEEecCccchHH-----------HHHHhC---
Confidence 27888753 4689999988643 345556667789999999999842 222221
Q ss_pred ccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 539 KSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
. .++||+|+|+|||.+||++|+++|++++.+
T Consensus 365 -------------~-~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 365 -------------V-SGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred -------------C-CCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 1 269999999999999999999999988764
No 12
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.3e-42 Score=375.59 Aligned_cols=361 Identities=17% Similarity=0.202 Sum_probs=282.1
Q ss_pred hHHHHHHhhccCcCCCCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCc-cccccchHHH
Q 007454 92 QIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESG 170 (603)
Q Consensus 92 ~vd~iR~~efp~L~~~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s-~~~~g~~~~~ 170 (603)
+++++|+ +||.|. ++.+||||++++++|+.|++++.+++.. ..+|+++ .+..+....+
T Consensus 5 ~~~~~r~-~fp~l~-~~~~yld~a~~~~~~~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~ 63 (401)
T PRK10874 5 NPAQFRA-QFPALQ-DAGVYLDSAATALKPQAVIEATQQFYSL-------------------SAGNVHRSQFAAAQRLTA 63 (401)
T ss_pred CHHHHHH-hCCCcC-CceEEEeCCcccCCCHHHHHHHHHHHHh-------------------ccCCCCCcccHHHHHHHH
Confidence 5788998 599884 4689999999999999999998876432 1256543 3334556788
Q ss_pred HHHHHHHHHHHHcCC-CCCcEEEecc-----------------------------Cch-HHHHHHHHHHcCCEEEEEecc
Q 007454 171 LESAMKKRIMDFLNI-SENDYVYDYE-----------------------------SEA-VEAMIRTSEKRGARVMSAEFS 219 (603)
Q Consensus 171 ~~~~aR~~Ia~~lna-~~~e~vf~~e-----------------------------s~s-V~~~~~~a~~~Ga~V~~~~~~ 219 (603)
.++++|++|++++|+ ++++++|+.. +.+ ...+...+++.|++|+.++++
T Consensus 64 ~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 143 (401)
T PRK10874 64 RYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLG 143 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecC
Confidence 999999999999999 7889976421 122 123445567889999999987
Q ss_pred CCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 007454 220 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPD 298 (603)
Q Consensus 220 ~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~D 298 (603)
+ ++.++.++|++.|.+ +|+||++++++|.||.++|++.| ++|+++|+++++|++|.+++ .++|++.+++|
T Consensus 144 ~-~~~~d~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~--~~~~~~~~~~d 214 (401)
T PRK10874 144 A-DRLPDVDLLPELITP------RTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVH--FPADVQALDID 214 (401)
T ss_pred C-CCcCCHHHHHHhcCc------CcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccc--ccCCchhcCCC
Confidence 4 678899999999863 68999999999999999999966 58999999999999999988 68999999999
Q ss_pred EEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhh
Q 007454 299 FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 378 (603)
Q Consensus 299 flv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~g 378 (603)
|+++|+||+|| |.|+|+||++++.++.+.|...||..... ..|. .++.. ..+.+ +|.||+|+++
T Consensus 215 ~~~~s~~K~~g--p~G~G~l~~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~-~~~~~--~e~Gt~~~~~ 278 (401)
T PRK10874 215 FYAFSGHKLYG--PTGIGVLYGKSELLEAMSPWQGGGKMLTE----VSFD-------GFTPQ-SAPWR--FEAGTPNVAG 278 (401)
T ss_pred EEEEecccccC--CCccEEEEEchHHHhcCCCeecCCcceEe----eccC-------ccCCC-CChhh--ccCCCcCHHH
Confidence 99999999999 88999999999988878754433321100 0010 01100 01234 7899999999
Q ss_pred hhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 007454 379 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHP 458 (603)
Q Consensus 379 i~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~ 458 (603)
++++. .|++++.++|++++.+|.+.|+++|.++|.+++
T Consensus 279 ~~al~----------------------------------------~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~-- 316 (401)
T PRK10874 279 VIGLS----------------------------------------AALEWLADIDINQAESWSRSLATLAEDALAKLP-- 316 (401)
T ss_pred HHHHH----------------------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 99987 699999899999999999999999999998763
Q ss_pred CCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccc
Q 007454 459 NTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREA 538 (603)
Q Consensus 459 ~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~ 538 (603)
.++++++. ..++++|++++. +...+.++++++||.++.|++|+.+ ++..++
T Consensus 317 ------g~~~~~~~----~~~i~~~~~~~~-----~~~~~~~~L~~~gI~v~~g~~~~~~-----------~~~~~g--- 367 (401)
T PRK10874 317 ------GFRSFRCQ----DSSLLAFDFAGV-----HHSDLVTLLAEYGIALRAGQHCAQP-----------LLAALG--- 367 (401)
T ss_pred ------CEEEeCCC----CCcEEEEEECCc-----CHHHHHHHHHHCCcEEeccccchHH-----------HHHHhC---
Confidence 27788753 468999998764 3345556667789999999999742 222221
Q ss_pred ccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 539 KSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
. .+.||+|+++|||.+||++|+++|++++..
T Consensus 368 -------------~-~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 368 -------------V-TGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred -------------C-CCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 1 269999999999999999999999998764
No 13
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=6.2e-42 Score=368.00 Aligned_cols=342 Identities=17% Similarity=0.134 Sum_probs=272.4
Q ss_pred eeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCC-CCC
Q 007454 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI-SEN 188 (603)
Q Consensus 110 vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna-~~~ 188 (603)
|||||+|++|+++.|++++.+++.. .++||++.+.++......++++|+++++++|+ +++
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~~-------------------~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ 61 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCD-------------------IYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLD 61 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHh-------------------cCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 6999999999999999998875431 24788887778877788999999999999998 678
Q ss_pred cEEEecc-------------------------------CchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhc
Q 007454 189 DYVYDYE-------------------------------SEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSK 237 (603)
Q Consensus 189 e~vf~~e-------------------------------s~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~ 237 (603)
+++|+.. +.++......++..|++|..++++ +++.++.++|++.|..
T Consensus 62 ~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~-~~g~~d~~~l~~~i~~- 139 (382)
T TIGR03403 62 DIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPIN-EQGTITAEQVREAITE- 139 (382)
T ss_pred eEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecC-CCCCCCHHHHHHhccc-
Confidence 9976532 122222233455679999999987 4688999999998863
Q ss_pred CCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceE
Q 007454 238 GKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFG 316 (603)
Q Consensus 238 ~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G 316 (603)
+|+|+++++.+|.||.++|++.| ++|+++|+++++|++|.+|+ .++|+.++++||+++|+||||| |.|+|
T Consensus 140 -----~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~--~~~~~~~~~~D~~~~s~~K~~g--p~G~g 210 (382)
T TIGR03403 140 -----KTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGK--IPVDVQKAGVDFLSFSAHKFHG--PKGVG 210 (382)
T ss_pred -----CCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCC--CccCccccCCCEEEEcchhhCC--CCceE
Confidence 58999999999999999999966 48999999999999999998 6899999999999999999998 89999
Q ss_pred EEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhH
Q 007454 317 CLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 396 (603)
Q Consensus 317 ~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~ 396 (603)
+||+|++. .+.|.+.||.. . .. ++.||+|++++++++
T Consensus 211 ~l~vr~~~--~~~p~~~g~~~---------~-----------------~~--~~~gt~~~~~~~al~------------- 247 (382)
T TIGR03403 211 GLYIRKGV--ELTPLFHGGEH---------M-----------------GG--RRSGTLNVPYIVAMG------------- 247 (382)
T ss_pred EEEECCCC--CCCCcccCCCC---------C-----------------CC--cccCCcChHHHHHHH-------------
Confidence 99999886 36664444321 0 11 468999999999987
Q ss_pred HHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCC
Q 007454 397 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 476 (603)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~ 476 (603)
.++++..+ +++.+.+|++.|+++|+++|++++ .++++++.. .+
T Consensus 248 ---------------------------~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~--------~~~~~~~~~-~~ 290 (382)
T TIGR03403 248 ---------------------------EAMRLANE-YLDFEKSHVRRLRDRLEDALLELP--------DVFVVGDRE-HR 290 (382)
T ss_pred ---------------------------HHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCC--------CEEEECCCC-CC
Confidence 57777666 488899999999999999998763 389999753 23
Q ss_pred CCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCE
Q 007454 477 RGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITV 556 (603)
Q Consensus 477 rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (603)
.+++++|++.+.+ ++.+.+.++++||.+|+|++|+....+++ .++.+++. . .....++
T Consensus 291 ~~~~~~~~~~~~~-----~~~~~~~L~~~gI~v~~g~~c~~~~~~~~-----~v~~~~g~-------~-----~~~~~~~ 348 (382)
T TIGR03403 291 VPNTILISIKGVE-----GEAMLWDLNKAGIAASTGSACASEDLEAN-----PVMVAIGA-------D-----KELAHTA 348 (382)
T ss_pred cCCEEEEEeCCCC-----HHHHHHhhccCCEEEEchhccCCCCCCcC-----HHHHHcCC-------C-----hHHhCee
Confidence 3679999998744 44455556788999999999998866554 55555431 0 1123479
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 557 VTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 557 VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
||+|+++|||.+|||+|+++|++.+.+
T Consensus 349 iR~s~~~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 349 IRLSLSRFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987754
No 14
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=6.3e-41 Score=362.28 Aligned_cols=361 Identities=19% Similarity=0.268 Sum_probs=279.6
Q ss_pred HHHHhhccCcCC----CCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccc-cccchHH
Q 007454 95 QIRAKEYYQLSL----SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQL-LHGGQES 169 (603)
Q Consensus 95 ~iR~~efp~L~~----~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~-~~g~~~~ 169 (603)
++|+ +||.++. +..+||||++++++|+.+++++.+++.. ..+||++.. ..+....
T Consensus 2 ~~~~-~f~~~~~~~~~~~~~yld~~~~~~~p~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~ 61 (403)
T TIGR01979 2 NIRA-DFPILKRKINGKPLVYLDSAATSQKPQQVIDAVAEYYRN-------------------SNANVHRGIHTLSVRAT 61 (403)
T ss_pred chhh-hCchhcCCCCCCceEEEeCccccCCCHHHHHHHHHHHHh-------------------CCCCCCCCccHHHHHHH
Confidence 4677 5999942 1469999999999999999998765432 125665432 2344566
Q ss_pred HHHHHHHHHHHHHcCCC-CCcEEEecc-----------------------------CchH-HHHHHHHHHcCCEEEEEec
Q 007454 170 GLESAMKKRIMDFLNIS-ENDYVYDYE-----------------------------SEAV-EAMIRTSEKRGARVMSAEF 218 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~-~~e~vf~~e-----------------------------s~sV-~~~~~~a~~~Ga~V~~~~~ 218 (603)
+.++++|+.|++++|++ +++++|+.. |.+. ..+...++..|++++.+++
T Consensus 62 ~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~ 141 (403)
T TIGR01979 62 EAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPL 141 (403)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEec
Confidence 78999999999999998 678876421 1121 1233455678999999998
Q ss_pred cCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 007454 219 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKDMDSFGLSLVRP 297 (603)
Q Consensus 219 ~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~ 297 (603)
+ .++.++.++|++.+.+ +|+|+++++++|.||.++|+++|. +|+++|+++++|+++.+++ .++|+..+++
T Consensus 142 ~-~~~~~~~~~l~~~i~~------~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~--~~~~~~~~~~ 212 (403)
T TIGR01979 142 D-DDGTLDLDDLEKLLTE------KTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPH--MPVDVQALDC 212 (403)
T ss_pred C-CCCCCCHHHHHHHhcc------CCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCc--cccCccccCC
Confidence 8 5788999999998863 689999999999999999999774 7999999999999999998 6899999999
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCC-ceeccccccccccccccCCCCCCcccCcccccccccCCCCh
Q 007454 298 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSG-MVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTF 376 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG-~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~ 376 (603)
||+++|+||+|| |.|+|+|+++++..+.+.|...|| ++........ .+. ..+.+ ++.||+++
T Consensus 213 d~~~~s~~K~~g--p~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~---~~~~~--~~~gt~~~ 275 (403)
T TIGR01979 213 DFYVFSGHKMYG--PTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEET----------TYN---EAPHK--FEAGTPNI 275 (403)
T ss_pred CEEEEecccccC--CCCceEEEEchHHHhcCCCeecCCCceeecccCcc----------ccC---CChhh--cCCCCccH
Confidence 999999999998 889999999998887787655554 3221110000 000 01233 68999999
Q ss_pred hhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCC
Q 007454 377 SGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQ 456 (603)
Q Consensus 377 ~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~ 456 (603)
..++++. .+++++.++|++++.+|...|+++|.+.|.++.
T Consensus 276 ~~~~al~----------------------------------------~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 315 (403)
T TIGR01979 276 AGVIGLG----------------------------------------AAIDYLEAIGLENIEAHEHELTAYALERLGEIP 315 (403)
T ss_pred HHHHHHH----------------------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9998887 699999999999999999999999999998763
Q ss_pred CCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhc
Q 007454 457 HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDR 536 (603)
Q Consensus 457 h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~ 536 (603)
.+++++|.....|+++++|++++.+ ...++++++++||.++.|++|+.+. +...
T Consensus 316 --------g~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~L~~~gI~v~~g~~~~~~~-----------~~~~-- 369 (403)
T TIGR01979 316 --------GLRIYGPRDAEDRGGIISFNVEGVH-----PHDVGTILDEEGIAVRSGHHCAQPL-----------MRRF-- 369 (403)
T ss_pred --------CEEEeCCCCccccCceEEEEeCCcC-----HHHHHHHHhhCCEEEcchhhhhHHH-----------HHHh--
Confidence 3899998654467999999997643 3456677788999999999996431 1111
Q ss_pred ccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 007454 537 EAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~ 582 (603)
.. .+.||+|+|+|||.+||++|+++|++++.
T Consensus 370 --------------~~-~~~iRiS~~~~~t~~di~~l~~~l~~~~~ 400 (403)
T TIGR01979 370 --------------GV-PATCRASFYIYNTEEDIDALVEALKKVRK 400 (403)
T ss_pred --------------CC-CCEEEEEeccCCCHHHHHHHHHHHHHHHH
Confidence 11 26899999999999999999999988764
No 15
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=2.4e-40 Score=358.61 Aligned_cols=344 Identities=16% Similarity=0.133 Sum_probs=266.2
Q ss_pred CCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCc-cccccchHHHHHHHHHHHHHHHcCC
Q 007454 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESGLESAMKKRIMDFLNI 185 (603)
Q Consensus 107 ~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s-~~~~g~~~~~~~~~aR~~Ia~~lna 185 (603)
+..|||||++++|+++.|++++..++.. .++|+++ .+..+....+.++++|+.|++++|+
T Consensus 2 ~~~~yld~aa~~~~~~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~ 62 (402)
T TIGR02006 2 KLPIYLDYAATTPVDPRVAEKMMPYLTE-------------------KFGNPASRSHSFGWEAEEAVENARNQVAELIGA 62 (402)
T ss_pred CccEEeeCCcCCCCCHHHHHHHHHHHHh-------------------cCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3479999999999999999998765321 1356654 2223444567899999999999999
Q ss_pred CCCcEEEecc-----------------------------CchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhh
Q 007454 186 SENDYVYDYE-----------------------------SEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVS 236 (603)
Q Consensus 186 ~~~e~vf~~e-----------------------------s~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~ 236 (603)
++++++|+.. |.++......+++.|++++.++++ +++.++.++|++.|..
T Consensus 63 ~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~l~~ 141 (402)
T TIGR02006 63 DSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK-SNGLIDLEELKAAIRD 141 (402)
T ss_pred CCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccC-CCCcCCHHHHHHhcCC
Confidence 9999977522 223322233345679999999988 4788999999998863
Q ss_pred cCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCce
Q 007454 237 KGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGF 315 (603)
Q Consensus 237 ~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~ 315 (603)
+++++++++.+|+||.++|++.| ++|+++|+++++|++|.+|+ .++|+..+++||+++|+||++| |.|+
T Consensus 142 ------~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~--~~~~~~~~~~D~~~~s~~K~~g--p~G~ 211 (402)
T TIGR02006 142 ------DTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGK--IPINVNELKVDLMSISGHKIYG--PKGI 211 (402)
T ss_pred ------CCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCC--cccCccccCCCEEEEehhhhcC--CCce
Confidence 58999999999999999999966 58999999999999999998 6999999999999999999998 9999
Q ss_pred EEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchh
Q 007454 316 GCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEI 395 (603)
Q Consensus 316 G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i 395 (603)
|+||++++....+.|...||.. .++ ++.||+|+.++++++
T Consensus 212 G~l~~~~~~~~~~~~~~~g~~~--------------------------~~~--~~~gt~~~~~~~al~------------ 251 (402)
T TIGR02006 212 GALYVRRKPRVRLEALIHGGGH--------------------------ERG--MRSGTLPTHQIVGMG------------ 251 (402)
T ss_pred EEEEEccCCCCCCCceecCCCc--------------------------cCC--ccCCCccHHHHHHHH------------
Confidence 9999998876667665554321 012 578999999999987
Q ss_pred HHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCC
Q 007454 396 SEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRF 475 (603)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~ 475 (603)
.++++++. +++.+.+|.+.|.++|+++|++++ .|+++|+. .
T Consensus 252 ----------------------------~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~--------~v~~~~~~--~ 292 (402)
T TIGR02006 252 ----------------------------EAFRIAKE-EMAQDTAHVLALRDRLLNGIKSIE--------EVYLNGDL--E 292 (402)
T ss_pred ----------------------------HHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCC--------CEEEeCCc--c
Confidence 58887765 799999999999999999998763 38899864 2
Q ss_pred CCC-CEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCC
Q 007454 476 DRG-PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGI 554 (603)
Q Consensus 476 ~rg-~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 554 (603)
.|. +++.|.+.+.++ +.+... .++|.+|+|++|+++...++ .++++++.. .....
T Consensus 293 ~~~p~~~~v~f~~~~~-----~~~~~~--l~~i~v~~G~~c~~~~~~~~-----~~l~~lg~~------------~~~~~ 348 (402)
T TIGR02006 293 HRVPGNLNVSFNYVEG-----ESLIMA--LKDLAVSSGSACTSASLEPS-----YVLRALGIN------------DELAH 348 (402)
T ss_pred ccCCCeEEEEEeCcCH-----HHHHHh--cCCEEEechhhcCCCCCCcc-----HHHHHcCCC------------hhhcC
Confidence 343 444444444333 233332 26999999999998776654 455554310 12334
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 555 TVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 555 g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
++||+|+|+|||.||||+|+++|++++..
T Consensus 349 ~~vR~S~~~~~t~edid~l~~~l~~~~~~ 377 (402)
T TIGR02006 349 SSIRFTIGRFTTEEEIDYAVKLVKSAIDK 377 (402)
T ss_pred ceEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999998865
No 16
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.7e-38 Score=340.95 Aligned_cols=345 Identities=14% Similarity=0.122 Sum_probs=268.5
Q ss_pred ceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCCCC
Q 007454 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEN 188 (603)
Q Consensus 109 ~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~~~ 188 (603)
++||||+|++++|+.|++++.+++.. .++|+++.+..|....++++++|+.|++++|++++
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~ 61 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQKAASQ-------------------YFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ 61 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHHHHHh-------------------cCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 48999999999999999998775431 23677776666666778999999999999999999
Q ss_pred cEEEecc-----------------------------CchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCC
Q 007454 189 DYVYDYE-----------------------------SEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGK 239 (603)
Q Consensus 189 e~vf~~e-----------------------------s~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~ 239 (603)
+++|+.. |.++......++..|+++..++++ +++.++.++|++.+.+
T Consensus 62 ~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~l~~--- 137 (381)
T PRK02948 62 GIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVD-KSGLIRLVDLERAITP--- 137 (381)
T ss_pred eEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeC-CCCCCCHHHHHHhcCC---
Confidence 9977532 222333334556789999999987 4688999999998853
Q ss_pred CCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEE
Q 007454 240 KKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCL 318 (603)
Q Consensus 240 ~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L 318 (603)
+++||++++.+|.||.++|++.| ++|+++|++|++|++|.+|+ .++|+..+++|++++|+||+|| |.|+|++
T Consensus 138 ---~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~--~~~~~~~~~~d~~~~s~~K~~g--p~G~G~l 210 (381)
T PRK02948 138 ---DTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGK--LPIDVFEMGIDSLSVSAHKIYG--PKGVGAV 210 (381)
T ss_pred ---CCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccc--cccCcccCCCCEEEecHHhcCC--CCcEEEE
Confidence 58999999999999999999966 58999999999999999998 6999999999999999999999 8899999
Q ss_pred EEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHH
Q 007454 319 FVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEV 398 (603)
Q Consensus 319 ~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~ 398 (603)
|++++.. +.+...++. + ... ++.||+|+++++++.
T Consensus 211 ~~~~~~~--~~~~~~~~~--------~------------------~~~--~~~~t~~~~~~~a~~--------------- 245 (381)
T PRK02948 211 YINPQVR--WKPVFPGTT--------H------------------EKG--FRPGTVNVPGIAAFL--------------- 245 (381)
T ss_pred EEcCCCC--CCCcccCCC--------C------------------CCC--cCCCCccHHHHHHHH---------------
Confidence 9998752 332222221 0 012 578999999999887
Q ss_pred hhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCC
Q 007454 399 RRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRG 478 (603)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg 478 (603)
++++.+.+ +++.+.++++.|+++|+++|+++. .. +.++++.. ...+
T Consensus 246 -------------------------~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~------~~-v~~~~~~~-~~~~ 291 (381)
T PRK02948 246 -------------------------TAAENILK-NMQEESLRFKELRSYFLEQIQTLP------LP-IEVEGHST-SCLP 291 (381)
T ss_pred -------------------------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCC------CC-EEEeCCCc-cCcC
Confidence 57776544 578899999999999999999873 22 44555322 3456
Q ss_pred CEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEE
Q 007454 479 PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVT 558 (603)
Q Consensus 479 ~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR 558 (603)
.+++|++++.++ +.+...++++||.+|.|++|+.++..++ +++.+++. . .....++||
T Consensus 292 ~i~~~~~~~~~~-----~~~~~~l~~~gI~v~~g~~c~~~~~~p~-----~~~~~~~~-~-----------~~~~~~~lR 349 (381)
T PRK02948 292 HIIGVTIKGIEG-----QYTMLECNRRGIAISTGSACQVGKQEPS-----KTMLAIGK-T-----------YEEAKQFVR 349 (381)
T ss_pred CEEEEEeCCCCH-----HHHHHhcccCCEEEEchHhcCCCCCCCC-----HHHHHcCC-C-----------hHHhCceEE
Confidence 799999987543 3344455788999999999998877664 56666531 0 011236999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHhhh
Q 007454 559 ASLGYLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 559 ~Slg~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
+|+|+|||.+||++|+++|++++..-
T Consensus 350 is~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 350 FSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887643
No 17
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=2.2e-38 Score=343.71 Aligned_cols=358 Identities=13% Similarity=0.110 Sum_probs=253.9
Q ss_pred hHHHHHHhhccCcCC---CCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCc-cccccch
Q 007454 92 QIDQIRAKEYYQLSL---SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQ 167 (603)
Q Consensus 92 ~vd~iR~~efp~L~~---~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s-~~~~g~~ 167 (603)
..+++|+ +||.+.. ++++|||++++||.|+.+.+++..++.. ++++.+ .+..|..
T Consensus 9 ~~~~~r~-~f~~~~~~~~~~~iyld~~a~g~~p~~v~~a~~~~~~~--------------------~~~~~~~~~~~~~~ 67 (406)
T TIGR01814 9 PLRALRD-EFHLPKIGDENAVIYLDGNSLGLMPKAARNALKEELDK--------------------WAKIAIRGHNTGKA 67 (406)
T ss_pred hHHHHHH-hcCCCcccCCCCcEEecCCCcCcCcHHHHHHHHHHHHH--------------------HHHhhhccCccCCC
Confidence 4577887 5997622 3579999999999999999998765431 111111 1211111
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEec----------------------------cCchHHH-HHHHHHHcCCEE----E
Q 007454 168 ESGLESAMKKRIMDFLNISENDYVYDY----------------------------ESEAVEA-MIRTSEKRGARV----M 214 (603)
Q Consensus 168 ~~~~~~~aR~~Ia~~lna~~~e~vf~~----------------------------es~sV~~-~~~~a~~~Ga~V----~ 214 (603)
....+.+.++++ +++|+++++++|+. ++.++.. +...+++.|+++ .
T Consensus 68 ~~~~~~~~~~~~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~ 146 (406)
T TIGR01814 68 PWFTLDESLLKL-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMV 146 (406)
T ss_pred Chhhhhhhhccc-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceE
Confidence 111223444446 89999999997742 1222222 233456678887 4
Q ss_pred EEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCC
Q 007454 215 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLS 293 (603)
Q Consensus 215 ~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls 293 (603)
.++.++ ++.++.+++++.+... +++|+||++++++|.||.++|++.| ++||++|++++||++|.+|+ .++|+.
T Consensus 147 ~~~~~~-~g~~~~~~l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~--~~id~~ 220 (406)
T TIGR01814 147 QIEPRE-EETLRLEDILDTIEKN---GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGN--VPLDLH 220 (406)
T ss_pred EeccCC-CCccCHHHHHHHHHhc---CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCC--cccccc
Confidence 555542 5778899999888531 2479999999999999999999966 58999999999999999999 799999
Q ss_pred CCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCC-ceeccccccccccccccCCCCCCcccCcccccccccC
Q 007454 294 LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSG-MVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 372 (603)
Q Consensus 294 ~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG-~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~G 372 (603)
.+++||+++|+|||+++|| | |+||++++....+.|...|. +... .. . +.... .+. ..+.+ +|.|
T Consensus 221 ~~gvD~~~~s~hK~l~g~p-G-~~l~v~~~~~~~~~p~~~g~~~~~~--~~-~-~~~~~----~~~---~~~~~--~~~G 285 (406)
T TIGR01814 221 DWGVDFACWCTYKYLNAGP-G-AGAFVHEKHAHTERPRLAGWWGHAR--PT-R-FKMDN----TLG---LIPCG--FRIS 285 (406)
T ss_pred cCCCCEEEEcCccccCCCC-C-eEEEEehhhhhhcCCCCCcccCCCC--cc-c-ccccc----ccC---CCccc--eeeC
Confidence 9999999999999975435 9 88998777655577665551 1100 00 0 00000 000 01233 6899
Q ss_pred CCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 007454 373 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 452 (603)
Q Consensus 373 T~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L 452 (603)
|+|+++++++. ++++++.++|++++.+|.+.|.++|.+.|
T Consensus 286 T~~~~~~~~l~----------------------------------------~al~~~~~~g~~~i~~~~~~l~~~l~~~l 325 (406)
T TIGR01814 286 NPPILSVAALR----------------------------------------GSLDIFDQAGMEALRKKSLLLTDYLEELI 325 (406)
T ss_pred CccHHHHHHHH----------------------------------------HHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 69999999999999999999999999999
Q ss_pred hcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHH
Q 007454 453 MKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLE 532 (603)
Q Consensus 453 ~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~ 532 (603)
.++.. |.|.++|++|.....|+++|+|.++ .++ +.+.+.++++||.+..
T Consensus 326 ~~~~~----~~~~~~i~~~~~~~~r~~~v~~~~~-~~~-----~~~~~~L~~~gi~v~~--------------------- 374 (406)
T TIGR01814 326 KARCG----GPPVLTIITPRDHAQRGCQLSLTHP-VPG-----KAVFQALIKRGVIGDK--------------------- 374 (406)
T ss_pred HhhcC----CCCceEEeCCCChhhcCCeEEEEec-CCH-----HHHHHHHHHCCEEEec---------------------
Confidence 87521 2345899998643457899999997 333 3344444567987631
Q ss_pred hhhcccccccccccccCCCCCCCEEEEec-CCCCCHHHHHHHHHHHHHHHh
Q 007454 533 KTDREAKSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~g~VR~Sl-g~~tt~eDVd~l~~~l~~~l~ 582 (603)
...+.||+|+ |+|||.+||++|++.|++++|
T Consensus 375 -------------------~~~~~iRiS~~~~~nt~~did~l~~~l~~~~~ 406 (406)
T TIGR01814 375 -------------------REPSVIRVAPVPLYNTFVDVYDAVNVLEEILD 406 (406)
T ss_pred -------------------cCCCeEEEechhccCCHHHHHHHHHHHHHHhC
Confidence 0125899999 699999999999999998875
No 18
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=3.1e-37 Score=332.62 Aligned_cols=351 Identities=18% Similarity=0.248 Sum_probs=265.1
Q ss_pred HHHHHHhhccCcCCCCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHH
Q 007454 93 IDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLE 172 (603)
Q Consensus 93 vd~iR~~efp~L~~~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~ 172 (603)
+.++|+ +||.++...++|||++|++++|+.+++++.+++... ..|+.+.+.......+.+
T Consensus 3 ~~~~r~-~f~~~~~~~~~yl~~~~~~~~p~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~ 62 (397)
T TIGR01976 3 VEAVRG-QFPALADGDRVFFDNPAGTQIPQSVADAVSAALTRS-------------------NANRGGAYESSRRADQVV 62 (397)
T ss_pred hhHHHh-hCCcCCCCCeEEecCCccCCCCHHHHHHHHHHHHhc-------------------CCCCCCCchHHHHHHHHH
Confidence 457887 699984212699999999999999999987654311 123332222222345778
Q ss_pred HHHHHHHHHHcCCCCCcEEEec----------------------------cCchH-HHHHHHHHHcCCEEEEEeccCCcc
Q 007454 173 SAMKKRIMDFLNISENDYVYDY----------------------------ESEAV-EAMIRTSEKRGARVMSAEFSWPRL 223 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~----------------------------es~sV-~~~~~~a~~~Ga~V~~~~~~~~~g 223 (603)
+++|+.|++++|+++++++|.. ++.++ ..+...+++.|+++..++++++++
T Consensus 63 ~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~ 142 (397)
T TIGR01976 63 DDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATG 142 (397)
T ss_pred HHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCC
Confidence 9999999999999887886632 12222 223355677899999999875578
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEE
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLIC 302 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~ 302 (603)
.++.++|++.|.. +|+++++++.+|.||.++|++.| .+|+++|+++++|++|++|. .++|+.++++||+++
T Consensus 143 ~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~--~~~~~~~~~~d~~~~ 214 (397)
T TIGR01976 143 ELHPDDLASLLSP------RTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPH--GLIDVQATGADFLTC 214 (397)
T ss_pred CcCHHHHHHhcCC------CceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccc--cCCCHHHcCCCEEEE
Confidence 8999999999863 68999999999999999999976 58999999999999999987 688999999999999
Q ss_pred cccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhh
Q 007454 303 SFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSI 382 (603)
Q Consensus 303 S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl 382 (603)
|+||||| | ++|+|+++++.++.+.+.... |.... .+.+ ++.||+|+..++++
T Consensus 215 s~~K~~g--~-~~G~l~~~~~~~~~l~~~~~~------------~~~~~-----------~~~~--~~~gt~~~~~~~~l 266 (397)
T TIGR01976 215 SAYKFFG--P-HMGILWGRPELLMNLPPYKLT------------FSYDT-----------GPER--FELGTPQYELLAGV 266 (397)
T ss_pred echhhcC--C-ceEEEEEcHHHHhhCCCcccc------------CccCC-----------Ccch--hcCCCCCHHHHHHH
Confidence 9999999 6 499999999887767653211 10000 0233 68999999999888
Q ss_pred hhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcC--------------HHHHHHHHHHHHHHH
Q 007454 383 EMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG--------------LTMISRRGRCLINWL 448 (603)
Q Consensus 383 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iG--------------l~~i~~r~~~L~~~L 448 (603)
. +|++++..+| ++++.+|++.|.++|
T Consensus 267 ~----------------------------------------~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 306 (397)
T TIGR01976 267 V----------------------------------------AAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYL 306 (397)
T ss_pred H----------------------------------------HHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 7 5888777766 788999999999999
Q ss_pred HHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhH
Q 007454 449 VNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKD 528 (603)
Q Consensus 449 ~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~ 528 (603)
.++|.++. .++++++.....++++++|++.+.+ ...+.+.+.++||.+++|++|.....
T Consensus 307 ~~~L~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~L~~~gI~v~~~~~~~~~~~-------- 365 (397)
T TIGR01976 307 LVGLSDLP--------GVTLYGVARLAARVPTVSFTVHGLP-----PQRVVRRLADQGIDAWAGHFYAVRLL-------- 365 (397)
T ss_pred HHHHhcCC--------CEEEeCCCCccCCCceEEEEeCCcC-----HHHHHHHHHHCCeEEEeCccchHHHH--------
Confidence 99998763 2889987433457899999997643 33444545677999999999974321
Q ss_pred HHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHH
Q 007454 529 NVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFV 577 (603)
Q Consensus 529 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l 577 (603)
...+ .....+.+|+|+++|||.+||++|+++|
T Consensus 366 ---~~~~--------------~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 366 ---RRLG--------------LNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred ---HHhC--------------CCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 1111 0112368999999999999999999864
No 19
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=4.4e-35 Score=317.56 Aligned_cols=345 Identities=18% Similarity=0.154 Sum_probs=258.2
Q ss_pred CceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccc-cccchHHHHHHHHHHHHHHHcCCC
Q 007454 108 NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQL-LHGGQESGLESAMKKRIMDFLNIS 186 (603)
Q Consensus 108 ~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~-~~g~~~~~~~~~aR~~Ia~~lna~ 186 (603)
..|||||++++|+++.+++++.+++... + .++|+++.. ..+..+...++++|+.|++++|++
T Consensus 3 ~~iyld~a~~~~~~~~v~~a~~~~~~~~---------~--------~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~ 65 (404)
T PRK14012 3 LPIYLDYSATTPVDPRVAEKMMPYLTMD---------G--------TFGNPASRSHRFGWQAEEAVDIARNQIADLIGAD 65 (404)
T ss_pred ceEEecCcCCCCCCHHHHHHHHHHHHhc---------c--------cCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcC
Confidence 4699999999999999999987754210 0 125665532 223344678999999999999999
Q ss_pred CCcEEEec-----------------------------cCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhc
Q 007454 187 ENDYVYDY-----------------------------ESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSK 237 (603)
Q Consensus 187 ~~e~vf~~-----------------------------es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~ 237 (603)
+++++|.. ++.++......+++.|+++..++++ +++.++.++|+++|..
T Consensus 66 ~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~-~~g~~d~~~l~~~i~~- 143 (404)
T PRK14012 66 PREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQ-SNGIIDLEKLEAAMRD- 143 (404)
T ss_pred cCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccC-CCCcCCHHHHHHhcCC-
Confidence 88887642 1222222233345579999999988 4788999999999863
Q ss_pred CCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceE
Q 007454 238 GKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFG 316 (603)
Q Consensus 238 ~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G 316 (603)
+++|+++++.+|+||.++|++.| ++|+++|++|++|++|.+|+ .++|+..+++||+++|+||++| |.|+|
T Consensus 144 -----~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~--~~~~~~~~~~D~~~~s~~K~~g--p~g~G 214 (404)
T PRK14012 144 -----DTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGK--VPIDLSKLKVDLMSFSAHKIYG--PKGIG 214 (404)
T ss_pred -----CCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCC--cccCcccCCCCEEEEehhhccC--CCceE
Confidence 68999999999999999999966 58999999999999999998 6899999999999999999998 88999
Q ss_pred EEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhH
Q 007454 317 CLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 396 (603)
Q Consensus 317 ~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~ 396 (603)
+||++++....+.|...||... ++ ++.||+++..+++++
T Consensus 215 ~l~~~~~~~~~~~~~~~g~~~~--------------------------~~--~~~gt~~~~~~~~l~------------- 253 (404)
T PRK14012 215 ALYVRRKPRVRLEAQMHGGGHE--------------------------RG--MRSGTLPTHQIVGMG------------- 253 (404)
T ss_pred EEEEecCCCCCCCceecCCCcc--------------------------CC--ccCCCcCHHHHHHHH-------------
Confidence 9999998765566655554310 11 578999999998887
Q ss_pred HHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCC
Q 007454 397 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 476 (603)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~ 476 (603)
++++.++. +++.+.+|.+.|.+++.+.|++++ .++++++.. ..
T Consensus 254 ---------------------------~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~--------~i~~~~~~~-~~ 296 (404)
T PRK14012 254 ---------------------------EAARIAKE-EMATENERIRALRDRLWNGIKDIE--------EVYLNGDLE-QR 296 (404)
T ss_pred ---------------------------HHHHHHHh-hHHHHHHHHHHHHHHHHHHHhcCC--------CEEEeCCcc-cc
Confidence 57776653 678889999999999999998753 277887532 12
Q ss_pred CCC--EEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCC
Q 007454 477 RGP--ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGI 554 (603)
Q Consensus 477 rg~--ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 554 (603)
.++ .++|++.+ + ..+...+ ++|.+++|.+|.+...++. ..+..... . .....
T Consensus 297 ~~~~~~~~~~~~~--~-----~~~~~~l--~~~~i~~g~~~~~~~~~~~-----~~~~~~~~-~-----------~~~~~ 350 (404)
T PRK14012 297 VPGNLNVSFNYVE--G-----ESLIMAL--KDLAVSSGSACTSASLEPS-----YVLRALGL-N-----------DELAH 350 (404)
T ss_pred CCCEEEEEEeCcC--H-----HHHHHhC--CCeEEEchhhhCCCCCCCC-----HHHHHcCC-C-----------hhhcC
Confidence 233 46666533 2 2233322 5899999999988765553 12222110 0 12334
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHhhh
Q 007454 555 TVVTASLGYLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 555 g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
++||+|+++++|.+||+++++.|++++...
T Consensus 351 ~~iRls~~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 351 SSIRFSLGRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred ceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999988763
No 20
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=7.4e-35 Score=311.47 Aligned_cols=345 Identities=18% Similarity=0.224 Sum_probs=257.0
Q ss_pred eeeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCcc-ccccchHHHHHHHHHHHHHHHcCCCC
Q 007454 110 TCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQ-LLHGGQESGLESAMKKRIMDFLNISE 187 (603)
Q Consensus 110 vYLDyaa~t-l~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~-~~~g~~~~~~~~~aR~~Ia~~lna~~ 187 (603)
|||||++++ +.|+.+++++.+++... .+|++.. +..+......++++|+.|++++|+++
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 61 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKNY-------------------GGSPGRGRYRLALRASREVEETRQLLAKLFNAPS 61 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHhc-------------------CCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 699999988 68889998876653311 0222211 11112335778899999999999976
Q ss_pred C-cEEEec-------------------------cCchHH-HHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCC
Q 007454 188 N-DYVYDY-------------------------ESEAVE-AMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKK 240 (603)
Q Consensus 188 ~-e~vf~~-------------------------es~sV~-~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~ 240 (603)
. +++|+. ++.++. .+...++..|.+++.++.++ ++.++.++|++.+..
T Consensus 62 ~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~~~~---- 136 (376)
T TIGR01977 62 SAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN-EGLISPERIKRAIKT---- 136 (376)
T ss_pred CCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC-CCCcCHHHHHHhcCC----
Confidence 4 776642 122222 22344556699999999874 678899999998853
Q ss_pred CCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEE
Q 007454 241 KKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLF 319 (603)
Q Consensus 241 ~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~ 319 (603)
++++|++++.+|.||.++|+++| .+|+++|+++++|+++.+|. .++|+..+++||+++|+|||+++ |.|+|+|+
T Consensus 137 --~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~--~~~~~~~~~~D~~~~s~~K~l~~-p~g~g~l~ 211 (376)
T TIGR01977 137 --NTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGV--IPIDMTELAIDMLAFTGHKGLLG-PQGTGGLY 211 (376)
T ss_pred --CCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCc--cCCCchhcCCCEEEecccccccC-CCCceEEE
Confidence 68999999999999999999976 48999999999999999998 79999999999999999999876 89999999
Q ss_pred EeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHh
Q 007454 320 VKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVR 399 (603)
Q Consensus 320 vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~ 399 (603)
++++.. +++...||.... ..++.... .+ +.+ ++.||+++++++++.
T Consensus 212 ~~~~~~--~~~~~~~~~~~~----~~~~~~~~----~~------~~r--~~~~t~~~~~~~a~~---------------- 257 (376)
T TIGR01977 212 IREGIK--LKPLKSGGTGSH----SALIDQPS----EL------PDR--FESGTLNTPGIAGLN---------------- 257 (376)
T ss_pred EcCCcC--cCceecCCCccc----cccccccc----cc------hhh--ccCCCCCHHHHHHHH----------------
Confidence 999862 555444432210 00110000 01 123 689999999998876
Q ss_pred hhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCC
Q 007454 400 RAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGP 479 (603)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ 479 (603)
++++++.++|++++.+|.+.|.+++.+.|.++. .+++++|.....+++
T Consensus 258 ------------------------~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~--------~~~~~~~~~~~~~~~ 305 (376)
T TIGR01977 258 ------------------------AGIKFIEKIGIANIAKKECMLTEKLLNGLREIN--------KVKIYGPADPANRVG 305 (376)
T ss_pred ------------------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC--------CeEEeCCCCccccCC
Confidence 699999999999999999999999999998753 388999754345789
Q ss_pred EEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEE
Q 007454 480 ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTA 559 (603)
Q Consensus 480 ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~ 559 (603)
+++|++++++++ .+.+.|.+++||.++.|.+|+.... ..+ +....+.||+
T Consensus 306 ~v~~~~~~~~~~----~~~~~L~~~~gi~v~~g~~~~~~~~-----------~~~---------------g~~~~~~iRi 355 (376)
T TIGR01977 306 VVSFTVEGIDSE----EVADILDEKFDIATRTGLHCAPLAH-----------KTI---------------GTFATGTIRL 355 (376)
T ss_pred eEEEEECCCCHH----HHHHHHhccCCEEEEcccccchHHH-----------HHh---------------CCCCCCeEEE
Confidence 999999876543 2344555555999999999986431 111 1123469999
Q ss_pred ecCCCCCHHHHHHHHHHHHH
Q 007454 560 SLGYLANFEDVYRLWAFVAQ 579 (603)
Q Consensus 560 Slg~~tt~eDVd~l~~~l~~ 579 (603)
|++.+||.+||++|+++|++
T Consensus 356 s~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 356 SLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred ecCCCCCHHHHHHHHHHHhh
Confidence 99999999999999999975
No 21
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=1.3e-34 Score=307.78 Aligned_cols=319 Identities=18% Similarity=0.159 Sum_probs=246.5
Q ss_pred eeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCcc-ccccchHHHHHHHHHHHHHHHcCCCCCc
Q 007454 111 CLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQ-LLHGGQESGLESAMKKRIMDFLNISEND 189 (603)
Q Consensus 111 YLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~-~~~g~~~~~~~~~aR~~Ia~~lna~~~e 189 (603)
||||++++|+++.+++++.+++.. .++||++. +.++..+.+.++++|+++++++|+++++
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~ 61 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLE-------------------EFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEE 61 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHh-------------------cCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 899999999999999998775421 12566553 3345556788999999999999999999
Q ss_pred EEEeccC------------------------------chHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCC
Q 007454 190 YVYDYES------------------------------EAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGK 239 (603)
Q Consensus 190 ~vf~~es------------------------------~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~ 239 (603)
++|+..+ .++......+++.|++|+.+++++ ++.++.++|++.+..
T Consensus 62 v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~--- 137 (353)
T TIGR03235 62 VIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE-SGRIDVDELADAIRP--- 137 (353)
T ss_pred EEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC-CCcCCHHHHHHhCCC---
Confidence 9886432 111112233456799999999884 688999999998853
Q ss_pred CCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEE
Q 007454 240 KKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCL 318 (603)
Q Consensus 240 ~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L 318 (603)
+++++++++.+|.||.++|++.| ++|+++|+++++|++|.+|. .++|++.+++||+++|+||||| |.|+|+|
T Consensus 138 ---~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~--~~~~~~~~~~D~~~~s~~K~~g--p~g~g~l 210 (353)
T TIGR03235 138 ---DTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGK--ITVDLSADRIDLISCSGHKIYG--PKGIGAL 210 (353)
T ss_pred ---CCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCC--ccccccccCCCEEEeehhhcCC--CCceEEE
Confidence 58999999999999999999866 58999999999999999998 7999999999999999999988 8999999
Q ss_pred EEeCCCCc--CcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhH
Q 007454 319 FVKKSTVP--ILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 396 (603)
Q Consensus 319 ~vkk~~~~--~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~ 396 (603)
|++++... .++|.+++|.. .++ ++.||+|+++++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~--------------------------~~~--~~~gt~~~~~~~al~------------- 249 (353)
T TIGR03235 211 VIRKRGKPKAPLKPIMFGGGQ--------------------------ERG--LRPGTLPVHLIVGMG------------- 249 (353)
T ss_pred EEccCcccccccCceeeCCCC--------------------------cCc--cccCCCChHHHHHHH-------------
Confidence 99998642 24444444220 022 579999999999987
Q ss_pred HHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCC
Q 007454 397 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 476 (603)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~ 476 (603)
.+++++.. |++++.+|.+.|+++|+++|.++ | ++++++.. ..
T Consensus 250 ---------------------------~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~------g---~~~~~~~~-~~ 291 (353)
T TIGR03235 250 ---------------------------EAAEIARR-NAQAWEVKLRAMRNQLRDALQTL------G---VKLNGDPA-ET 291 (353)
T ss_pred ---------------------------HHHHHHHh-hHHHHHHHHHHHHHHHHHHhccC------C---eEEeCCcc-cc
Confidence 68887764 89999999999999999999763 2 78888653 34
Q ss_pred CCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCE
Q 007454 477 RGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITV 556 (603)
Q Consensus 477 rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (603)
.+++++|++++.+ .+.+.+.+.+ +|.+++|.+|..+...+. +++.+++. + .....++
T Consensus 292 ~~~i~~~~~~~~~-----~~~v~~~L~~-~i~v~~g~~~~~~~~~~~-----~~l~~~g~-------~-----~~~~~~~ 348 (353)
T TIGR03235 292 IPHILNFSIDGVN-----SEALIVNLRA-DAAVSTGSACSSSKYEPS-----HVLQAMGL-------D-----TDRARGA 348 (353)
T ss_pred cCCEEEEEeCCcC-----HHHHHHHHhC-CeEEEchhhcCCCCCCCC-----HHHHHcCC-------C-----HHHhCcc
Confidence 5789999998744 3445555543 899999999987765443 66777641 0 1234589
Q ss_pred EEEec
Q 007454 557 VTASL 561 (603)
Q Consensus 557 VR~Sl 561 (603)
||+||
T Consensus 349 ~r~s~ 353 (353)
T TIGR03235 349 IRFSW 353 (353)
T ss_pred EEEeC
Confidence 99997
No 22
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=3.3e-33 Score=298.61 Aligned_cols=340 Identities=18% Similarity=0.252 Sum_probs=258.4
Q ss_pred eeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCc-cccccchHHHHHHHHHHHHHHHcCCC-C
Q 007454 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESGLESAMKKRIMDFLNIS-E 187 (603)
Q Consensus 110 vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s-~~~~g~~~~~~~~~aR~~Ia~~lna~-~ 187 (603)
+||||++++++|+.+++++.+++.. .++||++ .+..+....+.++++|+.+++++|++ +
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~ 61 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYRH-------------------YNANVHRGVHELSARATDAYEAAREKVARFINAPSP 61 (373)
T ss_pred CcccCccccCCCHHHHHHHHHHHHh-------------------cCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 6999999999999999998775431 2366665 34445556788999999999999998 6
Q ss_pred CcEEEeccC----------------------------chH-HHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcC
Q 007454 188 NDYVYDYES----------------------------EAV-EAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKG 238 (603)
Q Consensus 188 ~e~vf~~es----------------------------~sV-~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~ 238 (603)
++++++... .++ ..+...++..|++++.++.+ .++.++.++|++.|..
T Consensus 62 ~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~l~~-- 138 (373)
T cd06453 62 DEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD-DDGQLDLEALEKLLTE-- 138 (373)
T ss_pred CeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC-CCCCcCHHHHHHHhcC--
Confidence 677664321 111 11223445679999999988 4788999999999863
Q ss_pred CCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEE
Q 007454 239 KKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGC 317 (603)
Q Consensus 239 ~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~ 317 (603)
++++|++++.+|.||.++|++.| .+|+++|+++++|+++..+. .++++..+++|++++|+||+|| |.|+|+
T Consensus 139 ----~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~d~~~~s~~K~~~--~~g~g~ 210 (373)
T cd06453 139 ----RTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGH--MPVDVQDLGCDFLAFSGHKMLG--PTGIGV 210 (373)
T ss_pred ----CceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCc--eeeeccccCCCEEEeccccccC--CCCcEE
Confidence 68999999999999999999855 58999999999999999887 6888888999999999999999 579999
Q ss_pred EEEeCCCCcCcCCCCCCCce-eccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhH
Q 007454 318 LFVKKSTVPILVDNTSSGMV-SLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 396 (603)
Q Consensus 318 L~vkk~~~~~L~p~~~gG~v-~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~ 396 (603)
++++++..+.+++...||.. .........| . ..+.+ ++.||+|+.+++++.
T Consensus 211 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~-----------~~~~~--~~~~t~~~~~~~al~------------- 262 (373)
T cd06453 211 LYGKEELLEEMPPYGGGGEMIEEVSFEETTY--A-----------DLPHK--FEAGTPNIAGAIGLG------------- 262 (373)
T ss_pred EEEchHHhhcCCCeecCCCcccccccccccc--C-----------CCccc--cCCCCCCHHHHHHHH-------------
Confidence 99999988888765544332 1100000001 0 01223 678999999988876
Q ss_pred HHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCC
Q 007454 397 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 476 (603)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~ 476 (603)
.+++.+.+.|++.+.++.+.+.+++.+.|.+++ .++++.+. ..
T Consensus 263 ---------------------------~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~--~~ 305 (373)
T cd06453 263 ---------------------------AAIDYLEKIGMEAIAAHEHELTAYALERLSEIP--------GVRVYGDA--ED 305 (373)
T ss_pred ---------------------------HHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCC--------CeEEeCCc--cc
Confidence 688888888999999999999999999998753 37777653 34
Q ss_pred CCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCE
Q 007454 477 RGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITV 556 (603)
Q Consensus 477 rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (603)
+++++.|++++++ ...+.+.+..+||.++.|..|..+. +..+. ..+.
T Consensus 306 ~~~~~~~~~~~~~-----~~~i~~~l~~~gi~i~~g~~~~~~~-----------~~~~~-----------------~~~~ 352 (373)
T cd06453 306 RAGVVSFNLEGIH-----PHDVATILDQYGIAVRAGHHCAQPL-----------MRRLG-----------------VPGT 352 (373)
T ss_pred cCCeEEEEECCcC-----HHHHHHHHHHCCEEeccCccchhHH-----------HHHhC-----------------CCCe
Confidence 6889999997643 3344444456899999999987642 11110 1268
Q ss_pred EEEecCCCCCHHHHHHHHHHH
Q 007454 557 VTASLGYLANFEDVYRLWAFV 577 (603)
Q Consensus 557 VR~Slg~~tt~eDVd~l~~~l 577 (603)
||+|+|++||.+|+|+|+++|
T Consensus 353 iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 353 VRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EEEEecCCCCHHHHHHHHhhC
Confidence 999999999999999999864
No 23
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=1.9e-32 Score=294.98 Aligned_cols=340 Identities=15% Similarity=0.067 Sum_probs=240.4
Q ss_pred ccCcCCCCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHH
Q 007454 101 YYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (603)
Q Consensus 101 fp~L~~~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia 180 (603)
.|.+. ..++|||++.+++.+..|++++...+. ++.|. +....++++++|+.++
T Consensus 6 ~~~~~-~~~~~f~~Gp~~~~~~~v~~a~~~~~~----------------------~~~hr----~~~f~~~~~~~r~~l~ 58 (378)
T PRK03080 6 IPALR-PADPRFSSGPCKKRPGWQLEALADALL----------------------GRSHR----QKPVKALLKRVIEGTR 58 (378)
T ss_pred CCCcC-CCCCCcCCCCcCCChHHHHHHHHhhhc----------------------ccCcC----CHHHHHHHHHHHHHHH
Confidence 46663 458999999999998889999764211 11111 1245789999999999
Q ss_pred HHcCCCC-CcEEEeccC--chHH----------------------HHHH-HHHHcCC-EEEEEeccCCccccCHHHHHHH
Q 007454 181 DFLNISE-NDYVYDYES--EAVE----------------------AMIR-TSEKRGA-RVMSAEFSWPRLRINSEKLRKM 233 (603)
Q Consensus 181 ~~lna~~-~e~vf~~es--~sV~----------------------~~~~-~a~~~Ga-~V~~~~~~~~~g~i~~~~L~~~ 233 (603)
++||+++ ++++|...+ .+++ .+.. .+++.|. +|+.++++| +..++.++
T Consensus 59 ~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~~g~f~~~~~~~~~~~~g~~~v~~~~~~~-g~~~d~~~---- 133 (378)
T PRK03080 59 ELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLAWESFGSKWATDVVKQLKLEDPRVLEADY-GSLPDLSA---- 133 (378)
T ss_pred HHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEEeCHHHHHHHHHHHhhcCCCCceEeccCC-CCCCCHhh----
Confidence 9999954 578775311 1111 1122 3356788 899888875 45566554
Q ss_pred HhhcCCCCCCeeEEEEeCccccccccccHHHHHHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCC
Q 007454 234 VVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPS 313 (603)
Q Consensus 234 l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~ 313 (603)
+. .+++|+++|++|.||.++|++.|.. |++|++++|||+|.+|+ .++|+++ +||+++|+|||+|+ |.
T Consensus 134 i~-------~~~~V~~~h~~t~tG~~~pi~~I~~-~~~g~~~vVDa~qs~G~--~pidv~~--iD~~~~s~~K~l~~-P~ 200 (378)
T PRK03080 134 VD-------FDRDVVFTWNGTTTGVRVPVARWIG-ADREGLTICDATSAAFA--LPLDWSK--LDVYTFSWQKVLGG-EG 200 (378)
T ss_pred cC-------CCCCEEEEecCCccceeccchhhcc-ccCCCeEEEeccccccc--CCCCHHH--CcEEEEehhhhCCC-CC
Confidence 22 2567999999999999999997755 88999999999999999 7999987 79999999999986 88
Q ss_pred ceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccc
Q 007454 314 GFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQG 393 (603)
Q Consensus 314 G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~ 393 (603)
|+|+||++++.++.++|...|+.. +.... +..... .+ +.+ ++.||++.+.+.++.
T Consensus 201 G~g~l~v~~~~~~~~~p~~~~~~~---~~~~~-~~~~~~---~~------~~~--~~~~t~~tp~i~~i~---------- 255 (378)
T PRK03080 201 GHGMAILSPRAVERLESYTPARPI---PKFFR-LTKGGK---AI------ENS--FKGQTINTPSMLTVE---------- 255 (378)
T ss_pred ceEEEEECHHHHHhhhcccCCCCC---chhhe-eccchH---Hh------hhh--hcCCcccCchHHHHH----------
Confidence 999999999998888876555321 10000 000000 00 112 455565555544432
Q ss_pred hhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCC
Q 007454 394 EISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPK 472 (603)
Q Consensus 394 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~ 472 (603)
++. ++|+++.++ |++++.+|.+.|.++|++.|.++. .++++++.
T Consensus 256 ---~l~------------------------~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~--------~~~~~~~~ 300 (378)
T PRK03080 256 ---DYL------------------------DQLDWANSIGGLDALIARTAANASVLYDWAEKTP--------WATPLVAD 300 (378)
T ss_pred ---HHH------------------------HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC--------CcccccCC
Confidence 122 799999998 899999999999999999998763 36677643
Q ss_pred CCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCC
Q 007454 473 IRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANL 552 (603)
Q Consensus 473 ~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 552 (603)
...+.+.+++|++++.+.. ++..++.++++ +||.++.|.+|.
T Consensus 301 ~~~~s~~i~~~~~~~~~~~-~~~~~~~~l~~-~~i~v~~g~~~~------------------------------------ 342 (378)
T PRK03080 301 PATRSNTSVTLDFVDAQAA-VDAAAVAKLLR-ENGAVDIEPYRD------------------------------------ 342 (378)
T ss_pred ccccCccEEEEEcCCchHH-HHHHHHHHHHH-cCCeeccccccC------------------------------------
Confidence 2122346999999872211 33455666664 589999876542
Q ss_pred CCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 553 GITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 553 ~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
..+.||+|+++|||.+||++|+++|++.+++
T Consensus 343 ~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 343 APNGLRIWCGPTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred CCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 0157999999999999999999999987654
No 24
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00 E-value=4.9e-32 Score=289.36 Aligned_cols=315 Identities=12% Similarity=0.146 Sum_probs=219.3
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccc-ccc---chHHHHHHHHHHHHHHHcCC-CCC
Q 007454 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQL-LHG---GQESGLESAMKKRIMDFLNI-SEN 188 (603)
Q Consensus 114 yaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~-~~g---~~~~~~~~~aR~~Ia~~lna-~~~ 188 (603)
++|.++.|++|++++.+++... +|++... ..+ ....++++++|+.+++|||+ +++
T Consensus 4 ~pGp~~~p~~V~~a~~~~~~~~--------------------~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~ 63 (355)
T cd00611 4 SAGPAALPEEVLEQAQKELLDF--------------------NGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNY 63 (355)
T ss_pred CCCCCCCCHHHHHHHHHHHhhc--------------------ccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 4788899999999998765321 1333211 112 34568999999999999998 456
Q ss_pred cEEEeccC--chHH-----------------------HHHHHHHHcCCEEEEEeccCCcccc-CHHHHH-HHHhhcCCCC
Q 007454 189 DYVYDYES--EAVE-----------------------AMIRTSEKRGARVMSAEFSWPRLRI-NSEKLR-KMVVSKGKKK 241 (603)
Q Consensus 189 e~vf~~es--~sV~-----------------------~~~~~a~~~Ga~V~~~~~~~~~g~i-~~~~L~-~~l~~~~~~~ 241 (603)
+++|+..| .+++ .+.+.+++.|++++++++++ ++.. +..++. ..+.
T Consensus 64 ~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g~~~~~~~~~a~~~g~~~~~~~~~~-~g~~~~~~~~~~~~~~------ 136 (355)
T cd00611 64 KVLFLQGGATGQFAAVPLNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKE-EGKYTKIPDVETWDLA------ 136 (355)
T ss_pred eEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHhcCCCcEEEeccc-ccCCCCCCCHhhcCCC------
Confidence 78886431 1111 12336678899999998762 2222 212222 2232
Q ss_pred CCeeEEEEeCccccccccccHHHHHHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEe
Q 007454 242 KQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 242 ~~t~Lv~~~~~Sn~TG~~~pl~~i~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
++++||+++|.+|.||.+++ .+++.+|+.++|||+|++|+ .++|++++++ +++|+||+|| |.|+|+||+|
T Consensus 137 ~~~~lV~~~h~~t~tG~~~~----~i~~~~g~~~~VDa~qs~g~--~~idv~~~~~--~~ss~~K~lG--P~G~g~l~~~ 206 (355)
T cd00611 137 PDAAYVHYCSNETIHGVEFD----EVPDTGGVPLVADMSSNILS--RPIDVSKFGV--IYAGAQKNLG--PAGVTVVIVR 206 (355)
T ss_pred CCCCEEEEeCCcccccEEcc----eecccCCCeEEEEccccccC--CCCCHHHhCE--EEeecccccC--CCceEEEEEC
Confidence 47899999999999999854 24455999999999999999 7999998765 4477999999 8899999999
Q ss_pred CCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhh
Q 007454 322 KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRA 401 (603)
Q Consensus 322 k~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~ 401 (603)
+++++.+.|... ... .+....+ .. ...||+|+.+++||.
T Consensus 207 ~~~~~~~~~~~~-~~~-------~~~~~~~-------------~~--~~~~Tpn~~~i~~L~------------------ 245 (355)
T cd00611 207 KDLLGKARKITP-SML-------NYKTHAD-------------NN--SLYNTPPTFAIYMMG------------------ 245 (355)
T ss_pred HHHHhhcccCCC-Ccc-------cHHHHHh-------------cC--CCCCCChHHHHHHHH------------------
Confidence 998877765321 111 0000000 01 137999999999998
Q ss_pred hhhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEe-CCCCCCCCC-
Q 007454 402 EADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIY-GPKIRFDRG- 478 (603)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iy-gp~~~~~rg- 478 (603)
+||++++++ |+++|.+|.+.|+++|+++|.+++ | +| ++..+..|.
T Consensus 246 ----------------------aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~-----g-----l~~~~~~~~~rs~ 293 (355)
T cd00611 246 ----------------------LVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSN-----G-----FYRGPVDKRARSR 293 (355)
T ss_pred ----------------------HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCc-----c-----ccccCCCHHHcCc
Confidence 799999999 899999999999999999999874 2 34 332222355
Q ss_pred CEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEE
Q 007454 479 PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVT 558 (603)
Q Consensus 479 ~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR 558 (603)
.+++|++.+. . +..++ .+|.+|.|.+ .+..+ .. .|+||
T Consensus 294 ~vvsf~~~~~---~----l~~~~---~~~~~r~G~~-~~~~~------------------------------~~-~g~vR 331 (355)
T cd00611 294 MNVPFRLGKE---E----LEKEF---LKEAEAAGMI-GLKGH------------------------------RS-VGGIR 331 (355)
T ss_pred eEEEEEcCCh---h----hhHHH---HHHHHHCCCc-ccCCC------------------------------cc-cCeEE
Confidence 5699999884 1 11111 1355555542 22211 01 26999
Q ss_pred EecCCCCCHHHHHHHHHHHHHH
Q 007454 559 ASLGYLANFEDVYRLWAFVAQF 580 (603)
Q Consensus 559 ~Slg~~tt~eDVd~l~~~l~~~ 580 (603)
+|+++|||.|||++|+++|+++
T Consensus 332 ~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 332 ASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred EEccCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999985
No 25
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=1.1e-28 Score=267.59 Aligned_cols=334 Identities=13% Similarity=0.067 Sum_probs=250.2
Q ss_pred CCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCC
Q 007454 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (603)
Q Consensus 107 ~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~ 186 (603)
+++.||...|-+..++.|++++...+.. +. +....++++++|+.+++++|++
T Consensus 7 ~~~~~l~~pGP~~~~~~V~~a~~~~~~~------------------------~~----~~~~~~~~~~~~~~l~~~~g~~ 58 (401)
T PLN02409 7 PGRNHLFVPGPVNIPERVLRAMNRPNED------------------------HR----SPAFPALTKELLEDVKYIFKTK 58 (401)
T ss_pred CCCceeccCCCCCCCHHHHHHhcCCCCC------------------------CC----CHHHHHHHHHHHHHHHHHhCCC
Confidence 4567899999999999999998653210 00 1124578999999999999997
Q ss_pred CC-cEEEe-------------------------ccCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCC
Q 007454 187 EN-DYVYD-------------------------YESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKK 240 (603)
Q Consensus 187 ~~-e~vf~-------------------------~es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~ 240 (603)
++ .+++. +++.+..| ...+++.|++++.++++| ...++.++|++.|....
T Consensus 59 ~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~-~~~~~~~g~~v~~v~~~~-~~~~~~~~l~~~l~~~~-- 134 (401)
T PLN02409 59 SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLW-IDQMQRLNFDVDVVESPW-GQGADLDILKSKLRQDT-- 134 (401)
T ss_pred CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHH-HHHHHHcCCceEEEECCC-CCCCCHHHHHHHHhhCc--
Confidence 64 44442 12223333 567788999999999986 34588999999997410
Q ss_pred CCCeeEEEEeCccccccccccHHHH-HH--HHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEE
Q 007454 241 KKQRGLFVFPLHSRMTGARYPYLWM-RI--AQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGC 317 (603)
Q Consensus 241 ~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~--a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~ 317 (603)
.+++++|++++.+|.||.++|++.| ++ |+++|+++++|++|.+|. .++|+.++++||+++|+||||+. |.|+|+
T Consensus 135 ~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~--~~id~~~~~~D~~~~s~~K~l~~-P~G~G~ 211 (401)
T PLN02409 135 NHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGA--LDFRMDEWGVDVALTGSQKALSL-PTGLGI 211 (401)
T ss_pred CCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCC--ccccccccCccEEEEcCccccCc-CCCcce
Confidence 0268999999999999999999966 57 899999999999999998 79999999999999999999876 889999
Q ss_pred EEEeCCCCcCcCCCCCCC-ceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhH
Q 007454 318 LFVKKSTVPILVDNTSSG-MVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 396 (603)
Q Consensus 318 L~vkk~~~~~L~p~~~gG-~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~ 396 (603)
|+++++.++.+.+....+ ...+. ....++ + ... ++.+|+|+++++++.
T Consensus 212 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----------~-----~g~--~~~~Tp~~~~~~al~------------- 260 (401)
T PLN02409 212 VCASPKALEASKTAKSPRVFFDWA-DYLKFY----------K-----LGT--YWPYTPSIQLLYGLR------------- 260 (401)
T ss_pred eEECHHHHHHHhcCCCCCeecCHH-HHHHHH----------h-----cCC--CCCCCccHHHHHHHH-------------
Confidence 999998876665421110 00000 000000 0 011 246799999998887
Q ss_pred HHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCC
Q 007454 397 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 476 (603)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~ 476 (603)
.+++++.+.|++++.+|.+.|.++|++.|.++ | +++++|.. ..
T Consensus 261 ---------------------------~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~------g---~~~~~~~~-~~ 303 (401)
T PLN02409 261 ---------------------------AALDLIFEEGLENVIARHARLGEATRLAVEAW------G---LKLCTKKP-EW 303 (401)
T ss_pred ---------------------------HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc------C---CeeccCCh-hh
Confidence 69999989999999999999999999999875 2 67888643 23
Q ss_pred CC-CEEEEEEc-cCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCC
Q 007454 477 RG-PALAFNVF-DWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGI 554 (603)
Q Consensus 477 rg-~ivsFnv~-~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 554 (603)
|. .+++|+++ ++++ ..++++|++++||.++.|.. ....
T Consensus 304 ~s~~v~~~~~p~~~~~----~~l~~~l~~~~~i~i~~G~~------------------------------------~~~~ 343 (401)
T PLN02409 304 RSDTVTAVVVPEGIDS----AEIVKNAWKKYNLSLGLGLN------------------------------------KVAG 343 (401)
T ss_pred cccceEEEeCCCCCCH----HHHHHHHHHhCCEEEEcCCC------------------------------------cccC
Confidence 44 45668775 3332 23456777899999987722 1123
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 555 TVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 555 g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+.+|||...|+|.+||.+++.+|.+.|++
T Consensus 344 ~~~Rig~~g~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 344 KVFRIGHLGNVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred CEEEEcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999998876
No 26
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.96 E-value=9.6e-29 Score=264.55 Aligned_cols=324 Identities=11% Similarity=0.080 Sum_probs=224.5
Q ss_pred eeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCCC-C
Q 007454 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISE-N 188 (603)
Q Consensus 110 vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~~-~ 188 (603)
.+|=++|.+++|+.|++++...+.... +. +.+.+.-.| ......++++++|++++++||+++ .
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~--------~~-------~~g~~~~~h-r~~~f~~~~~~~~~~l~~l~~~~~~~ 67 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWN--------GS-------GMSVMEISH-RSKEFEAVAEEAEADLRELLNIPDNY 67 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccc--------cC-------CccccccCC-CCHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 455579999999999999876542110 00 001110001 112235899999999999999844 4
Q ss_pred cEEEeccCc-----------------------h--HHHHHHHHHHcCCEEEEEeccCCccccCHHHHHH-HHhhcCCCCC
Q 007454 189 DYVYDYESE-----------------------A--VEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK-MVVSKGKKKK 242 (603)
Q Consensus 189 e~vf~~es~-----------------------s--V~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~-~l~~~~~~~~ 242 (603)
+++|...+. . -..+.+.+++.|.. ..+..+|..+..+..++++ .|. +
T Consensus 68 ~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~------~ 140 (360)
T PRK05355 68 KVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS------D 140 (360)
T ss_pred EEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCC------C
Confidence 566643211 0 12246778888965 6666653345555555555 453 2
Q ss_pred CeeEEEEeCccccccccc-cHHHHHHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEe
Q 007454 243 QRGLFVFPLHSRMTGARY-PYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~-pl~~i~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
++++|+++|..+.||+++ |+..+ +|++++|||+|++|+ .++|++++ ||+++|+||+|| |.|+|+||+|
T Consensus 141 ~~~~V~~th~eTstGv~~~~i~~i-----~g~l~vVDavss~g~--~~idv~~~--d~~~~ssqK~lg--P~Glg~l~~s 209 (360)
T PRK05355 141 DAAYVHYTSNETIDGTEFHELPDT-----GDVPLVADMSSDILS--RPIDVSKF--GLIYAGAQKNIG--PAGLTIVIVR 209 (360)
T ss_pred CCCEEEEccCCCcceEecCccccc-----CCCcEEEEcCccccC--ccCCHHHc--cEEEEecccccc--CCceEEEEEC
Confidence 589999999999999999 77644 899999999999999 79999976 799999999999 8899999999
Q ss_pred CCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhh
Q 007454 322 KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRA 401 (603)
Q Consensus 322 k~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~ 401 (603)
+++++.+.|. .+++.++.. + .+ .. .-.||+|+.++++|.
T Consensus 210 ~~~l~~~~~~-~~~~~~~~~-----~---------~~------~~--~~~~Tp~~~~i~aL~------------------ 248 (360)
T PRK05355 210 EDLLGRALPS-IPSMLDYKT-----H---------AD------ND--SMYNTPPTFAIYLAG------------------ 248 (360)
T ss_pred HHHHhhcccC-CChHHHHHH-----H---------Hh------cC--CccCCCcHHHHHHHH------------------
Confidence 9998877764 233221110 0 00 00 136999999999988
Q ss_pred hhhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCC-C
Q 007454 402 EADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRG-P 479 (603)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg-~ 479 (603)
++|+++.++ |++++.+|.+.|+++|+++|+++. ++..+.+. ..|. .
T Consensus 249 ----------------------~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~--------~~~~~~~~--~~rs~~ 296 (360)
T PRK05355 249 ----------------------LVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSD--------FYRNPVAP--EDRSRM 296 (360)
T ss_pred ----------------------HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC--------CcccCCCh--hhcCCc
Confidence 799999999 899999999999999999999862 12222221 2344 6
Q ss_pred EEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEE
Q 007454 480 ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTA 559 (603)
Q Consensus 480 ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~ 559 (603)
+++|++++. +....+. ++.++.|.+|..+. ...|.||+
T Consensus 297 v~sf~~~~~----~~~~~~~------~~~~~~Gi~~~~~~--------------------------------~~~g~vRi 334 (360)
T PRK05355 297 NVPFTLADE----ELDKKFL------AEAKAAGLVGLKGH--------------------------------RSVGGMRA 334 (360)
T ss_pred EEEEEcCCh----HHHHHHH------HHHHHCCCcccCCC--------------------------------CccCcEEE
Confidence 799999874 1111121 23334444552110 01268999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHh
Q 007454 560 SLGYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 560 Slg~~tt~eDVd~l~~~l~~~l~ 582 (603)
|+++|||.|||++|+++|++++.
T Consensus 335 S~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 335 SIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999764
No 27
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.96 E-value=4.9e-28 Score=266.60 Aligned_cols=324 Identities=15% Similarity=0.090 Sum_probs=233.3
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHH-HHHHHHHHcCCCCCcEEEe
Q 007454 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESA-MKKRIMDFLNISENDYVYD 193 (603)
Q Consensus 115 aa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~-aR~~Ia~~lna~~~e~vf~ 193 (603)
++-..+|+.|++++...++.. |..+||++.+..|....+.+++ +|++++++||++++++.|+
T Consensus 41 ~sen~~s~~v~~~~~~~l~~~-----------------y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~ 103 (452)
T PTZ00094 41 ASENFTSRAVLECLGSCFTNK-----------------YAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVN 103 (452)
T ss_pred cccccCCHHHHHHhcchhhcc-----------------ccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceee
Confidence 777789999999987654321 2238999998888887777774 9999999999998887665
Q ss_pred c----cCchHHHHHHHHHHcCCEEEE-------------------------------EeccCCccccCHHHHHHHHhhcC
Q 007454 194 Y----ESEAVEAMIRTSEKRGARVMS-------------------------------AEFSWPRLRINSEKLRKMVVSKG 238 (603)
Q Consensus 194 ~----es~sV~~~~~~a~~~Ga~V~~-------------------------------~~~~~~~g~i~~~~L~~~l~~~~ 238 (603)
- .+++...++....+.|.+|.. .+++ ++|.++.++|++.+...
T Consensus 104 ~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~-~~g~id~~~L~~~l~~~- 181 (452)
T PTZ00094 104 VQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN-EKGLIDYDKLEELAKAF- 181 (452)
T ss_pred cCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC-CCCCcCHHHHHHHHHHh-
Confidence 2 112222222222223433332 2233 25789999999999631
Q ss_pred CCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCCCCCCCCCC---CCCcEEEEcccccCCCCCCc
Q 007454 239 KKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKDMDSFGLSL---VRPDFLICSFYQIFGENPSG 314 (603)
Q Consensus 239 ~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~m~~ldls~---~~~Dflv~S~hK~fG~~P~G 314 (603)
+++++++. .| ++|.++|++.|+ +|+++|++++||++|.+|+ .++|+.. .++||+++|+||||++ |.|
T Consensus 182 ----~~~lvi~~-~s-~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~--i~~~~~~~~~~~~D~l~~S~hK~l~G-P~G 252 (452)
T PTZ00094 182 ----RPKLIIAG-AS-AYPRDIDYKRFREICDSVGAYLMADIAHTSGL--VAAGVLPSPFPYADVVTTTTHKSLRG-PRS 252 (452)
T ss_pred ----CCCEEEEe-CC-CCCCccCHHHHHHHHHHcCCEEEEeccchhcc--ccCCCCCCCCCCCcEEEcCCccCCCC-CCc
Confidence 35676654 44 599999999775 8999999999999999998 6665432 3699999999998855 998
Q ss_pred eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccch
Q 007454 315 FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 394 (603)
Q Consensus 315 ~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~ 394 (603)
|+|++++...+.+.+.. .. . +. +. + .|+++..++++++
T Consensus 253 -g~l~~~~~~~~~l~~~~-~~---------~-----------~~-----p~---~-~G~~~~~~iaal~----------- 290 (452)
T PTZ00094 253 -GLIFYRKKVKPDIENKI-NE---------A-----------VF-----PG---L-QGGPHNHQIAAIA----------- 290 (452)
T ss_pred -eEEEEecccchHHHHhh-cc---------c-----------cC-----CC---C-CCCchHHHHHHHH-----------
Confidence 88998887654343211 00 0 00 11 2 4788888988887
Q ss_pred hHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCC
Q 007454 395 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIR 474 (603)
Q Consensus 395 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~ 474 (603)
.+++++...+++.+.+++..|+++|.+.|.+. | ++++++..
T Consensus 291 -----------------------------~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~------g---~~v~~~~~- 331 (452)
T PTZ00094 291 -----------------------------VQLKEVQSPEWKEYAKQVLKNAKALAAALEKR------G---YDLVTGGT- 331 (452)
T ss_pred -----------------------------HHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC------C---cEEecCCC-
Confidence 68888877788999999999999999999874 2 45666432
Q ss_pred CCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEE-eeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCC
Q 007454 475 FDRGPALAFNVFDWKREKIEPVLVQKLADRENISL-SYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLG 553 (603)
Q Consensus 475 ~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~l-r~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 553 (603)
..+..+|+|+..+.+ ...+..+++++||.+ +.|..|.... ..
T Consensus 332 ~~~~~~v~~~~~~~~-----~~~~~~~L~~~gI~vs~~~~p~~~~~--------------------------------~~ 374 (452)
T PTZ00094 332 DNHLVLVDLRPFGIT-----GSKMEKLLDAVNISVNKNTIPGDKSA--------------------------------LN 374 (452)
T ss_pred CCceEeecCCcCCCC-----HHHHHHHHHHCCcEEecccCCCCCcC--------------------------------CC
Confidence 235567777777644 455777778899999 5666665321 11
Q ss_pred CCEEEEecCCCCC----HHHHHHHHHHHHHHHhhh
Q 007454 554 ITVVTASLGYLAN----FEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 554 ~g~VR~Slg~~tt----~eDVd~l~~~l~~~l~~~ 584 (603)
.++||+|+++||| ++||++++++|++.+...
T Consensus 375 ~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~ 409 (452)
T PTZ00094 375 PSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLA 409 (452)
T ss_pred CCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 3699999999998 999999999999998863
No 28
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.96 E-value=2.2e-27 Score=252.99 Aligned_cols=311 Identities=12% Similarity=0.146 Sum_probs=217.4
Q ss_pred CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCc-cccccch---HHHHHHHHHHHHHHHcCCCC-CcEEE
Q 007454 118 GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQ---ESGLESAMKKRIMDFLNISE-NDYVY 192 (603)
Q Consensus 118 tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s-~~~~g~~---~~~~~~~aR~~Ia~~lna~~-~e~vf 192 (603)
++.|.+|++++.+++.+. .|.+. .+..+.+ ..++++++|+.+.++||++. .+++|
T Consensus 1 ~~~p~~v~~~~~~~~~~~--------------------~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~ 60 (349)
T TIGR01364 1 AALPEEVLEQAQKELLNF--------------------NGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLF 60 (349)
T ss_pred CCCCHHHHHHHHHHHhCc--------------------cCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEE
Confidence 468999999988865421 12211 1112222 34899999999999999854 46766
Q ss_pred eccCc--hH-----------------------HHHHHHHHHcCCEEEEEecc----CCccccCHHHHHHHHhhcCCCCCC
Q 007454 193 DYESE--AV-----------------------EAMIRTSEKRGARVMSAEFS----WPRLRINSEKLRKMVVSKGKKKKQ 243 (603)
Q Consensus 193 ~~es~--sV-----------------------~~~~~~a~~~Ga~V~~~~~~----~~~g~i~~~~L~~~l~~~~~~~~~ 243 (603)
...|. ++ ..+.+.+++.|+ +..+..+ | .-.+++++++ + +++
T Consensus 61 ~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~-~~~~~~~~~~--~------~~~ 130 (349)
T TIGR01364 61 LQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNY-TKIPDPSTWE--I------SED 130 (349)
T ss_pred EcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCC-CCCCCHHhcC--C------CCC
Confidence 53321 11 123567788898 7776643 3 2233444433 1 136
Q ss_pred eeEEEEeCccccccccccHHHHHHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 007454 244 RGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 244 t~Lv~~~~~Sn~TG~~~pl~~i~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
+++|++.|..+.||+.+| .+++.++++++|||+|++|+ .++|++++ ||+++|+||+|| |.|+|+|+++++
T Consensus 131 ~~~v~~th~ETstGv~~~----~l~~~~~~l~iVDavss~g~--~~id~~~~--d~~~~ssqK~lg--P~Glg~l~~s~~ 200 (349)
T TIGR01364 131 AAYVHYCANETIHGVEFR----ELPDVKNAPLVADMSSNILS--RPIDVSKF--GLIYAGAQKNIG--PAGLTVVIVRKD 200 (349)
T ss_pred CCEEEEcCCCCcccEecc----eecccCCCeEEEEccccccC--ccCCHHHc--cEEEEecccccC--CCceEEEEECHH
Confidence 899999999999999988 55666899999999999999 79999975 699999999999 889999999999
Q ss_pred CCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhh
Q 007454 324 TVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEA 403 (603)
Q Consensus 324 ~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~ 403 (603)
+++.++|.. .... +++...+ .. .-.||||+.++++|.
T Consensus 201 ~~~~~~~~~-~~~~-------~~~~~~~-------------~~--~~~~Tp~~~~i~al~-------------------- 237 (349)
T TIGR01364 201 LLGRASRIT-PSML-------NYKIHAE-------------ND--SMYNTPPTFAIYVSG-------------------- 237 (349)
T ss_pred HHhhcccCC-CCcc-------hHHHHHh-------------cC--CCCCCCcHHHHHHHH--------------------
Confidence 987776621 1111 1000000 00 125899999999988
Q ss_pred hhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCC-CEE
Q 007454 404 DSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRG-PAL 481 (603)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg-~iv 481 (603)
++|++++++ |++++.+|.+.|+++|++.|++++ | +.++.. .+..|. .++
T Consensus 238 --------------------~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~-----g---l~~~~~-~~~~rs~~v~ 288 (349)
T TIGR01364 238 --------------------LVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSN-----G---FYRNPV-DPRNRSRMNV 288 (349)
T ss_pred --------------------HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC-----C---eeccCC-CHHHcCCeEE
Confidence 799999999 799999999999999999999873 2 333321 112354 679
Q ss_pred EEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEec
Q 007454 482 AFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASL 561 (603)
Q Consensus 482 sFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Sl 561 (603)
+|++++. .+.. .+.+.+.++||++..|.. ..|+||+|+
T Consensus 289 sf~~~~~---~~~~-~~~~~~~~~Gi~~~~~~~--------------------------------------~~g~vRvS~ 326 (349)
T TIGR01364 289 VFTLGNE---ELEK-RFLKEAEERGLVSLKGHR--------------------------------------SVGGMRASI 326 (349)
T ss_pred EEecCCh---hHhH-HHHHHHHHCCCcccCCcc--------------------------------------ccCeeEEEC
Confidence 9999874 1212 222234456665443311 126899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 007454 562 GYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 562 g~~tt~eDVd~l~~~l~~~l~ 582 (603)
++|||.|||++|+++|++++.
T Consensus 327 ~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 327 YNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred cCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999998764
No 29
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.96 E-value=3.2e-26 Score=249.89 Aligned_cols=332 Identities=13% Similarity=0.008 Sum_probs=230.6
Q ss_pred CCceeeecCC--------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHH
Q 007454 107 SNHTCLDYFG--------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKR 178 (603)
Q Consensus 107 ~~~vYLDyaa--------~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~ 178 (603)
...+||||++ +|++.+.+.+.+..++.. ..+||++. |..+ ++++++|+.
T Consensus 32 ~~~iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~-------------------~~~np~s~---~~~~-~le~~~~~~ 88 (431)
T TIGR01788 32 HDELSLDGNPRLNLATFVTTWMEPEARKLMDETINK-------------------NMIDKDEY---PQTA-EIENRCVNM 88 (431)
T ss_pred HHHhhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhc-------------------CCCCcccC---ccHH-HHHHHHHHH
Confidence 3468899999 899888888887765321 23677663 4444 999999999
Q ss_pred HHHHcCCC-C-CcEEEec-----cCc--hH------------------------------HHHHHHHHHcCCEEEEEecc
Q 007454 179 IMDFLNIS-E-NDYVYDY-----ESE--AV------------------------------EAMIRTSEKRGARVMSAEFS 219 (603)
Q Consensus 179 Ia~~lna~-~-~e~vf~~-----es~--sV------------------------------~~~~~~a~~~Ga~V~~~~~~ 219 (603)
|+++||++ + +++.|.. |++ ++ ..+.+.++..|.+|++++++
T Consensus 89 la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d 168 (431)
T TIGR01788 89 LADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMD 168 (431)
T ss_pred HHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecC
Confidence 99999998 4 5787742 221 11 11122333458888899987
Q ss_pred CCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhC------CcEEEEecccc-------CCC
Q 007454 220 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQEN------DWHILIDACAL-------GPK 285 (603)
Q Consensus 220 ~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~------g~~vlvDAaq~-------~~~ 285 (603)
..+++++.++|++.|.+ +|.||++++.+|+||+++|++.|. +|+++ |+++||||+|. .++
T Consensus 169 ~~~~~vd~~~L~~~i~~------~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~ 242 (431)
T TIGR01788 169 PGRYVIDPEQVVEAVDE------NTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPD 242 (431)
T ss_pred CCceeeCHHHHHHHHhh------CCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCC
Confidence 42358999999999974 689999999999999999999775 88998 89999999999 565
Q ss_pred CCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCC--CcCc--CCCCCCCc-eeccccccccccccccCCCCCCcc
Q 007454 286 DMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKST--VPIL--VDNTSSGM-VSLLPAKKQLWLTDEFSSCETEPE 360 (603)
Q Consensus 286 ~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~--~~~L--~p~~~gG~-v~~~~~~~~~~~~~~~~~~~~e~~ 360 (603)
.++|+...++|.+++|+|||+.+ |.|+|+||+|+.. ...+ .+.+.||. .+ + .+
T Consensus 243 --~~~~~~~~~~DSis~s~HK~~~~-P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~--------~--------t~--- 300 (431)
T TIGR01788 243 --LEWDFRLPRVKSINVSGHKYGLV-YPGVGWVIWRDEEALPEELIFHVNYLGGDEPT--------F--------TL--- 300 (431)
T ss_pred --chhhcCCCCceEEEECchhccCC-CCCcEEEEEeChHHcchhheecccccCCCCCC--------c--------ce---
Confidence 56777777899999999999733 9999999999862 1212 12244421 10 0 00
Q ss_pred cCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHH
Q 007454 361 QTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRR 440 (603)
Q Consensus 361 ~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r 440 (603)
.|+-+..+++++= ..+..+-..|+.++.++
T Consensus 301 ----------~~sR~g~~al~~w----------------------------------------~~l~~lG~~G~~~i~~~ 330 (431)
T TIGR01788 301 ----------NFSRPANQVIAQY----------------------------------------YNFLRLGREGYRKIMQN 330 (431)
T ss_pred ----------ecCchHHHHHHHH----------------------------------------HHHHHhcHHHHHHHHHH
Confidence 1111111222111 23444444689999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCC
Q 007454 441 GRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFS 520 (603)
Q Consensus 441 ~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~ 520 (603)
...|++||.++|.+++ .++|++|. .+.++|+|++.+.+...++...+...+++.||.+.+ |..+.
T Consensus 331 ~~~la~~l~~~L~~~~--------~~el~~~~---~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~---~~~p~- 395 (431)
T TIGR01788 331 SLDVARYLAEEIAKLG--------PFEIISDG---SGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPA---YTLPK- 395 (431)
T ss_pred HHHHHHHHHHHHHhCC--------CEEEeeCC---CCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccC---CCCCC-
Confidence 9999999999998763 38999873 368999999986432234555565555677886531 10000
Q ss_pred chhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 521 DKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 521 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
.-.+.-++|+.+-...+.+.+++|++.|.+.+..
T Consensus 396 -----------------------------~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (431)
T TIGR01788 396 -----------------------------NAEDIVVMRIVVREGFSRDLAELLIEDIEAALAY 429 (431)
T ss_pred -----------------------------ccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 0012247999998899999999999999887653
No 30
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.95 E-value=3.9e-26 Score=242.60 Aligned_cols=322 Identities=16% Similarity=0.123 Sum_probs=231.3
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCCCCc-EEE
Q 007454 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEND-YVY 192 (603)
Q Consensus 114 yaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~~~e-~vf 192 (603)
++|..+.|+.+++++.+.+. + + .+....++++++|+.+++++|+++++ +++
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~--------------------------~-~-~~~~~~~~~~~~~~~la~~~g~~~~~~~~~ 55 (356)
T cd06451 4 IPGPSNVPPRVLKAMNRPML--------------------------G-H-RSPEFLALMDEILEGLRYVFQTENGLTFLL 55 (356)
T ss_pred cCCCcCCCHHHHHHhCCCcc--------------------------C-C-CCHHHHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 57777888999999754211 0 0 11234577899999999999996544 433
Q ss_pred ec-------------------------cCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEE
Q 007454 193 DY-------------------------ESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLF 247 (603)
Q Consensus 193 ~~-------------------------es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv 247 (603)
.. .+-+.. +...++..|+++..++.+ +++.++.++|++.+.+ .+++++
T Consensus 56 ~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~i~~-----~~~~~v 128 (356)
T cd06451 56 SGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDR-WADMAERYGADVDVVEKP-WGEAVSPEEIAEALEQ-----HDIKAV 128 (356)
T ss_pred ecCcHHHHHHHHHHhCCCCCEEEEecCCchhHH-HHHHHHHhCCCeEEeecC-CCCCCCHHHHHHHHhc-----cCCCEE
Confidence 21 111111 345677889999999987 3678899999999863 258899
Q ss_pred EEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCCc
Q 007454 248 VFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVP 326 (603)
Q Consensus 248 ~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~ 326 (603)
.+++.+|.||.++|++.|. +|+++|+++++|++|.+|. .++++..+++|++++|+|||||. |.|+|+|+++++.++
T Consensus 129 ~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~--~~~~~~~~~~d~~~~s~~K~l~~-p~g~G~l~~~~~~~~ 205 (356)
T cd06451 129 TLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGG--EPFRMDEWGVDVAYTGSQKALGA-PPGLGPIAFSERALE 205 (356)
T ss_pred EEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccC--ccccccccCccEEEecCchhccC-CCCcceeEECHHHHH
Confidence 9999999999999999775 8899999999999998887 57888888999999999999997 889999999988766
Q ss_pred CcCC--CCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhh
Q 007454 327 ILVD--NTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEAD 404 (603)
Q Consensus 327 ~L~p--~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~ 404 (603)
.+.+ ...+..... .....++ ...+ ++.||+++..++++.
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~~---------------~~~~--~~~~t~~~~~~~a~~--------------------- 246 (356)
T cd06451 206 RIKKKTKPKGFYFDL-LLLLKYW---------------GEGY--SYPHTPPVNLLYALR--------------------- 246 (356)
T ss_pred HHHhcCCCCceeecH-HHHHhhh---------------cccC--CCCCCChHHHHHHHH---------------------
Confidence 5542 111100000 0000001 0011 467889988877765
Q ss_pred hhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEE
Q 007454 405 SIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFN 484 (603)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFn 484 (603)
++++++.+.|++.+.++.+.+++++.+.|.++ | ++++++. ..+.+++.|-
T Consensus 247 -------------------aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~~--~~~~~~~~~~ 296 (356)
T cd06451 247 -------------------EALDLILEEGLENRWARHRRLAKALREGLEAL------G---LKLLAKP--ELRSPTVTAV 296 (356)
T ss_pred -------------------HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc------C---CeeccCc--ccCCCceEEE
Confidence 68888888899999999999999999999875 2 5666653 2356666543
Q ss_pred EccCCCCccCHHHHH-HHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCC
Q 007454 485 VFDWKREKIEPVLVQ-KLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGY 563 (603)
Q Consensus 485 v~~~~g~~v~~~~V~-~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~ 563 (603)
..+ ++ ++...+. +|.++.||.++.|..|. ..+.||+|++.
T Consensus 297 ~~~-~~--~~~~~~~~~L~~~~gI~~~~g~~~~------------------------------------~~~~iRis~~~ 337 (356)
T cd06451 297 LVP-EG--VDGDEVVRRLMKRYNIEIAGGLGPT------------------------------------AGKVFRIGHMG 337 (356)
T ss_pred ECC-CC--CCHHHHHHHHHHhCCEEEecccccc------------------------------------cCCEEEEecCC
Confidence 322 12 2334444 45444499998775321 12599999999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 007454 564 LANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 564 ~tt~eDVd~l~~~l~~~l 581 (603)
++|.|||++++++|++++
T Consensus 338 ~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 338 EATREDVLGVLSALEEAL 355 (356)
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 999999999999998865
No 31
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.95 E-value=1.2e-26 Score=248.65 Aligned_cols=291 Identities=12% Similarity=0.074 Sum_probs=202.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCC-cEEEeccC--chHHHH---------------------HHHHHH--cCCEEEEEeccC
Q 007454 167 QESGLESAMKKRIMDFLNISEN-DYVYDYES--EAVEAM---------------------IRTSEK--RGARVMSAEFSW 220 (603)
Q Consensus 167 ~~~~~~~~aR~~Ia~~lna~~~-e~vf~~es--~sV~~~---------------------~~~a~~--~Ga~V~~~~~~~ 220 (603)
...++++++|++++++||++++ +++|...+ .+++.+ ...+.. .+.++..++++|
T Consensus 38 ~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~ 117 (361)
T TIGR01366 38 PVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEKKSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP 117 (361)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccccccEEecCHHHHHHHHHHHhhhccCCceEEecCC
Confidence 3468999999999999999654 78886442 122111 122222 122566666665
Q ss_pred CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHHHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEE
Q 007454 221 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFL 300 (603)
Q Consensus 221 ~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dfl 300 (603)
...++. .+ .++++||+++|.+|.||+++|++.| +|++|+.++|||+|++|+ .++|++. +||+
T Consensus 118 -~~~~~~-----~~------~~~~~lV~~~h~et~tG~~~pi~~I--~~~~g~~~iVDavqs~g~--~~idv~~--~D~~ 179 (361)
T TIGR01366 118 -GSAPEP-----QA------DPGVDVIAWAHNETSTGVAVPVRRP--EGSDDALVVIDATSGAGG--LPVDIAE--TDVY 179 (361)
T ss_pred -CCCCCC-----cc------CCCCCEEEEcccCCccceecccccc--cccCCCeEEEEcCccccC--CCCCHHH--CCEE
Confidence 222221 12 2479999999999999999999866 588999999999999999 7999986 8999
Q ss_pred EEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccC---CCChh
Q 007454 301 ICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA---TNTFS 377 (603)
Q Consensus 301 v~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~G---T~n~~ 377 (603)
++|+||+||. |.|++++++++++++.+++...||... |.... + .. .++ .. ++.+ |+++.
T Consensus 180 ~~s~~K~lg~-~~Gl~~~~~s~~~~~~~~~~~~~~~~~--p~~~d-~--~~----~~~------~~--~~~~t~~tp~i~ 241 (361)
T TIGR01366 180 YFAPQKNFAS-DGGLWLAIMSPAALERIEAIAASGRWV--PEFLS-L--PT----AVD------NS--LKNQTYNTPAIA 241 (361)
T ss_pred EEEchhhcCC-CCceEEEEECHHHHhhhhcccCCCCCC--chhhh-H--HH----HHh------cc--ccCCCCCCchHH
Confidence 9999999995 679999999999988888766654310 11100 0 00 000 11 2344 45555
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQ 456 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~ 456 (603)
.++++. ++++++.++ |++.+.+|.+.|.+++++.|.++.
T Consensus 242 ~i~~l~----------------------------------------~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~ 281 (361)
T TIGR01366 242 TLALLA----------------------------------------EQIDWMNGNGGLDWAVARTADSSSRLYSWAQERP 281 (361)
T ss_pred HHHHHH----------------------------------------HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 555665 799999999 699999999999999999999863
Q ss_pred CCCCCCCceEEEeCCCC--CCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhh
Q 007454 457 HPNTEGNALVKIYGPKI--RFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKT 534 (603)
Q Consensus 457 h~~~~g~plv~Iygp~~--~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~ 534 (603)
.+++|.+.. ...+.++|+|. .+ +++..+...++.+||.+..|..
T Consensus 282 --------~~~~~~~~~~~~s~~v~~v~~~-~g-----~~~~~v~~~L~~~gI~i~~~~~-------------------- 327 (361)
T TIGR01366 282 --------YATPFVTDPGKRSQVVGTIDFV-DD-----IDAATVAKILRANGIVDTEPYR-------------------- 327 (361)
T ss_pred --------CcccCCCChhhcccceEEEECC-Cc-----cCHHHHHHHHHHCCCeeccCcc--------------------
Confidence 255555321 12233566663 44 4566665555667999854310
Q ss_pred hcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 535 DREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
....++||||++.|||.+||++|+++|++.+++
T Consensus 328 ----------------~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 328 ----------------KLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred ----------------ccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 011248999999999999999999999997653
No 32
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=7.9e-25 Score=233.69 Aligned_cols=300 Identities=12% Similarity=0.103 Sum_probs=214.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCC--cEEEecc----------------------Cch-HHH-HHHHHHHcCCEEEEEeccCC
Q 007454 168 ESGLESAMKKRIMDFLNISEN--DYVYDYE----------------------SEA-VEA-MIRTSEKRGARVMSAEFSWP 221 (603)
Q Consensus 168 ~~~~~~~aR~~Ia~~lna~~~--e~vf~~e----------------------s~s-V~~-~~~~a~~~Ga~V~~~~~~~~ 221 (603)
..++++++|+.+++++|++++ +++++.. ++. ... +...+++.|++++.++.++
T Consensus 33 ~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~- 111 (363)
T TIGR02326 33 YNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGE- 111 (363)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC-
Confidence 467889999999999999764 5665321 111 111 2356778899999999874
Q ss_pred ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEE
Q 007454 222 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFL 300 (603)
Q Consensus 222 ~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dfl 300 (603)
++.++.++|+++|..+ ++++++++++.+|.||.++|++.| ++||++|+++++|++|.+|. .++|+..+++||+
T Consensus 112 ~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~--~~~~~~~~~~D~~ 185 (363)
T TIGR02326 112 VEPPDVVEVEAILAAD----PAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGG--IPIDIAELHIDYL 185 (363)
T ss_pred CCCCCHHHHHHHHhhC----CCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccC--cccchhhcCccEE
Confidence 7789999999998742 356789999999999999999865 58999999999999999998 6999999999999
Q ss_pred EEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhh
Q 007454 301 ICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPM 380 (603)
Q Consensus 301 v~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~ 380 (603)
++|+|||+++ |.|+|+|+++++.++.+.+...+-.... ...|.. ++. .+. ....|++.++++
T Consensus 186 ~~s~~K~l~~-p~G~G~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~-------~~~---~~~---~~~ft~~~~~~~ 247 (363)
T TIGR02326 186 ISSANKCIQG-VPGFGFVIARQAELAACKGNARSLSLDL----YDQWRC-------MED---NHG---KWRFTSPTHVVH 247 (363)
T ss_pred EecCcccccc-CCcceEEEECHHHHHHhhcCCCceeecH----HHHHHH-------Hhc---cCC---CCCCCCcHHHHH
Confidence 9999998754 8899999999887655543221100000 000100 000 000 123367788887
Q ss_pred hhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 007454 381 SIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPN 459 (603)
Q Consensus 381 gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~h~~ 459 (603)
++. ++++.+... |++++.++.+.++++|++.|.++
T Consensus 248 al~----------------------------------------~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~---- 283 (363)
T TIGR02326 248 AFA----------------------------------------QALLELEKEGGVAARHQRYQQNQKTLVAGMRAL---- 283 (363)
T ss_pred HHH----------------------------------------HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc----
Confidence 776 577766444 69999999999999999999876
Q ss_pred CCCCceEEEeCCCCCCCCCCE-EEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccc
Q 007454 460 TEGNALVKIYGPKIRFDRGPA-LAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREA 538 (603)
Q Consensus 460 ~~g~plv~Iygp~~~~~rg~i-vsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~ 538 (603)
| +.++.+. ..+.++ ++|.+++.. .+....+.+.+.++||.++.|..+
T Consensus 284 --g---~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~v~~~L~~~gi~v~~g~~~----------------------- 331 (363)
T TIGR02326 284 --G---FEPLLDD--EIQSPIITSFYSPEDP--DYRFADFYQRLKEQGFVIYPGKVS----------------------- 331 (363)
T ss_pred --C---CeeccCc--ccCCceEEEEECCCCC--CCCHHHHHHHHHHCCEEEECCcCC-----------------------
Confidence 2 4455553 234554 567776421 123344555556779999876321
Q ss_pred ccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 007454 539 KSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~ 582 (603)
....+|+|+..++|.|||++++++|++.|+
T Consensus 332 --------------~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 332 --------------QVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred --------------CCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 014799998778999999999999998763
No 33
>PRK02769 histidine decarboxylase; Provisional
Probab=99.94 E-value=1.7e-24 Score=233.08 Aligned_cols=314 Identities=15% Similarity=0.090 Sum_probs=233.1
Q ss_pred CcCCCCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHH
Q 007454 103 QLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDF 182 (603)
Q Consensus 103 ~L~~~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~ 182 (603)
+++.++..|+=|.....++++.++.+..+..+ ..+||.+.+.+|..+.++++++++.++++
T Consensus 17 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~-------------------n~gnp~~~~~~g~~~~~~e~~~~~~~a~l 77 (380)
T PRK02769 17 YLRHNQYFNVGYPEAADFDYSALKRFFSFSIN-------------------NCGDPYSKSNYPLNSFDFERDVMNFFAEL 77 (380)
T ss_pred HHHHhhhcccCCCchhhcCHHHHHHHHHhhhc-------------------cCCCccccCCCCCChHHHHHHHHHHHHHH
Confidence 34435567788888888888888877664321 23788888888888889999999999999
Q ss_pred cCCCCCcE--EEec---------------------------cCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHH
Q 007454 183 LNISENDY--VYDY---------------------------ESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKM 233 (603)
Q Consensus 183 lna~~~e~--vf~~---------------------------es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~ 233 (603)
||++++++ +|+. +|.|+ ...++..|.++..++.+ +++++|.++|+++
T Consensus 78 ~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv---~ka~~~lg~~~~~V~~~-~~g~id~~~L~~~ 153 (380)
T PRK02769 78 FKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSV---SKIARLLRIKSRVITSL-PNGEIDYDDLISK 153 (380)
T ss_pred hCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehH---HHHHHHcCCCCceeccC-CCCcCcHHHHHHH
Confidence 99987774 4432 22222 23344456667777776 6899999999999
Q ss_pred HhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCC---cEEEEeccccCCCCCC-------CCCCCCCCCcEEEE
Q 007454 234 VVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQEND---WHILIDACALGPKDMD-------SFGLSLVRPDFLIC 302 (603)
Q Consensus 234 l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g---~~vlvDAaq~~~~~m~-------~ldls~~~~Dflv~ 302 (603)
|..+ +.+|.||++++.+|+||.+.|++.|. +|+++| +++||||||.+++ . ++|+.. ++|++++
T Consensus 154 i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~--~p~~~~~~~~d~~~-~vDsis~ 227 (380)
T PRK02769 154 IKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMI--LPFVNNPPPFSFAD-GIDSIAI 227 (380)
T ss_pred HHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEeccccee--ecccCccccCCccC-CCCEEEE
Confidence 9853 34689999999999999999999764 899998 6999999999987 5 488877 9999999
Q ss_pred cccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhh
Q 007454 303 SFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSI 382 (603)
Q Consensus 303 S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl 382 (603)
|+|||+|. |.|+|+||+|++....+.+. + .+. ... .. ...||.|..+++++
T Consensus 228 s~HK~~~~-P~g~G~l~~r~~~~~~~~~~-----~-------~yl-~~~-------------d~--t~~GSR~g~~~l~l 278 (380)
T PRK02769 228 SGHKFIGS-PMPCGIVLAKKKYVERISVD-----V-------DYI-GSR-------------DQ--TISGSRNGHTALLL 278 (380)
T ss_pred CCcccCCC-CCCcEEEEEehhhhhhcccC-----c-------ccc-CCC-------------CC--CccCCCCcHHHHHH
Confidence 99999887 99999999999876544431 1 111 000 00 24799998888877
Q ss_pred hhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 007454 383 EMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEG 462 (603)
Q Consensus 383 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g 462 (603)
- .+|+++...|+.++.++...|+++|.++|.++ |
T Consensus 279 w----------------------------------------~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~------g 312 (380)
T PRK02769 279 W----------------------------------------AAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN------G 312 (380)
T ss_pred H----------------------------------------HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC------C
Confidence 6 68888888899999999999999999999874 2
Q ss_pred CceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccccc
Q 007454 463 NALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKS 542 (603)
Q Consensus 463 ~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~ 542 (603)
+++.+. ....+|+|.-++. . + . .|-+|.+
T Consensus 313 ---~~~~~~----p~~~~v~f~~~~~-------~-~---~--~~w~l~~------------------------------- 341 (380)
T PRK02769 313 ---IPAWRN----PNSITVVFPCPSE-------R-I---W--KKWHLAT------------------------------- 341 (380)
T ss_pred ---CEEEcC----CCceEEEEcCCCH-------H-H---H--hCeeEcc-------------------------------
Confidence 445553 2467898875541 1 1 1 2322210
Q ss_pred ccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 007454 543 DNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 543 ~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l 581 (603)
. ...+|+.+-...|.|.||+|++-|.+.+
T Consensus 342 ---------~-~~~~hi~~~~~~~~~~~~~f~~dl~~~~ 370 (380)
T PRK02769 342 ---------S-GNQAHIITMPHHNKQQIDSLIDELIFDL 370 (380)
T ss_pred ---------c-CCEEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 1 1378888889999999999998887654
No 34
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.92 E-value=4.2e-23 Score=220.66 Aligned_cols=300 Identities=13% Similarity=0.084 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHHcCCCCC--cEEEecc----------------------CchH--HHHHHHHHHcCCEEEEEeccCCc
Q 007454 169 SGLESAMKKRIMDFLNISEN--DYVYDYE----------------------SEAV--EAMIRTSEKRGARVMSAEFSWPR 222 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~--e~vf~~e----------------------s~sV--~~~~~~a~~~Ga~V~~~~~~~~~ 222 (603)
.+.++++|+.+++++|++++ +++++-. .+.. ..+...+++.|+++..++.+| +
T Consensus 36 ~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~-~ 114 (368)
T PRK13479 36 NALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGE-D 114 (368)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCC-C
Confidence 35789999999999999763 3434211 0111 112466788899999999985 5
Q ss_pred cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEE
Q 007454 223 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLI 301 (603)
Q Consensus 223 g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv 301 (603)
+.++.++|++.|..+ ++++++.+++.+|.||.++|++.| ++|+++|+++++|++|..+. .++|+..+++|+++
T Consensus 115 ~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~--~~~~~~~~~~d~~v 188 (368)
T PRK13479 115 EPPDAAEVEAALAAD----PRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGA--IPIDIAELGIDALI 188 (368)
T ss_pred CCCCHHHHHHHHHhC----CCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCC--ccccccccCceEEE
Confidence 678999999998642 357899999999999999999865 58999999999999999887 68999999999999
Q ss_pred EcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhh
Q 007454 302 CSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMS 381 (603)
Q Consensus 302 ~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~g 381 (603)
+|+|||+++ |.|+|+++++++.++.+.+....-..+.. ..+... .. .. ....|+|+.++++
T Consensus 189 ~s~~K~l~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~~------~~--~~~~t~~~~~~~~ 249 (368)
T PRK13479 189 SSANKCIEG-VPGFGFVIARRSELEACKGNSRSLSLDLY----DQWAYM------EK------TG--QWRFTPPTHVVAA 249 (368)
T ss_pred ecCcccccc-CCCceEEEECHHHHHHhhcCCCCeeecHH----HHHhhh------cc------cC--CCCCCCcHHHHHH
Confidence 999997643 88999999999876655532111000000 000000 00 00 0123788888888
Q ss_pred hhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 007454 382 IEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNT 460 (603)
Q Consensus 382 l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~h~~~ 460 (603)
+. ++++.+.+. +++++.++.+.++++|++.|.++
T Consensus 250 l~----------------------------------------~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----- 284 (368)
T PRK13479 250 FY----------------------------------------QALLELEEEGGVPARGARYANNQRTLVAGMRAL----- 284 (368)
T ss_pred HH----------------------------------------HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 76 577766444 58888899999999999999886
Q ss_pred CCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccc
Q 007454 461 EGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKS 540 (603)
Q Consensus 461 ~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~ 540 (603)
| ++++.+.. ...+.+++|.+++..+ ++...+.+.+.++||.++.|..+
T Consensus 285 -g---~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~gi~v~~g~~~------------------------- 332 (368)
T PRK13479 285 -G---FEPLLDAE-IQSPIIVTFHAPADPA--YDFKEFYERLKEQGFVIYPGKLT------------------------- 332 (368)
T ss_pred -C---CcccCCch-hcCceEEEEECCCCCC--cCHHHHHHHHHHCCEEEecCCCC-------------------------
Confidence 2 34554431 2334568888765422 23334444455679999865211
Q ss_pred ccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 541 KSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 541 ~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
..+.+|+|...++|.||+++++++|+++++.
T Consensus 333 ------------~~~~iRis~~~~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 333 ------------QVDTFRIGCIGDVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred ------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 0147999987789999999999999998864
No 35
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.92 E-value=1.6e-22 Score=215.71 Aligned_cols=312 Identities=14% Similarity=0.062 Sum_probs=216.0
Q ss_pred eeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCCCCcE
Q 007454 111 CLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDY 190 (603)
Q Consensus 111 YLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~~~e~ 190 (603)
+|+.+.+. ..+.+++++.++... ..++++.. . .+...++++|+.+++++|+++.+.
T Consensus 24 ~~~~~~~~-~~~~~~~a~~~~~~~-------------------~~~~~~~~--~--~~~~~~~~~~~~la~~~g~~~~~~ 79 (371)
T PRK13520 24 ILSSMCTE-PHPIARKAHEMFLET-------------------NLGDPGLF--P--GTAKLEEEAVEMLGELLHLPDAYG 79 (371)
T ss_pred eeeeeecC-chHHHHHHHHHHHhc-------------------CCCCcccC--c--cHHHHHHHHHHHHHHHhCCCCCCe
Confidence 58876655 455667777654321 11333221 1 145677899999999999987665
Q ss_pred EEeccC--------------------------chHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCe
Q 007454 191 VYDYES--------------------------EAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQR 244 (603)
Q Consensus 191 vf~~es--------------------------~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t 244 (603)
+|.... .....+.+.++..|.++..++.+| ++.++.++|++.|.. ++
T Consensus 80 ~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~------~~ 152 (371)
T PRK13520 80 YITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDD-DYRVDVKAVEDLIDD------NT 152 (371)
T ss_pred EEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEecCCC-CCcCCHHHHHHHHhh------CC
Confidence 553211 112224455667799999999885 678999999999974 47
Q ss_pred eEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCC-----CCCCCCCCCCCCcEEEEcccccCCCCCCceEEE
Q 007454 245 GLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPK-----DMDSFGLSLVRPDFLICSFYQIFGENPSGFGCL 318 (603)
Q Consensus 245 ~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~-----~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L 318 (603)
.++++.+.+|.||.+.|++.| ++|+++|++++||++|.++. .-..+|+...++|++++|+|||.+. |.|.|++
T Consensus 153 ~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a-~~~~G~~ 231 (371)
T PRK13520 153 IGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA-PIPAGGI 231 (371)
T ss_pred EEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCc-cCCceEE
Confidence 777788888999999999966 48999999999999987542 0012566667899999999998764 7789999
Q ss_pred EEeCC-CCcCcCC--CCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchh
Q 007454 319 FVKKS-TVPILVD--NTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEI 395 (603)
Q Consensus 319 ~vkk~-~~~~L~p--~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i 395 (603)
++++. .++.+.. ++..+. ... ...||.+...++++.
T Consensus 232 ~~~~~~~~~~l~~~~~~~~~~---------------------------~~~--~~~gt~~~~~~~~~~------------ 270 (371)
T PRK13520 232 LFRDESYLDALAVDTPYLTSK---------------------------KQA--TLTGTRSGAGVAATY------------ 270 (371)
T ss_pred EEcCHHHHHhhcccCccccCC---------------------------CCc--ceEeeccChHHHHHH------------
Confidence 98664 4433321 111110 001 236777776665554
Q ss_pred HHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCC
Q 007454 396 SEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRF 475 (603)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~ 475 (603)
.+++.+...|++++.++...++++|.++|.++ | ++++.+
T Consensus 271 ----------------------------~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~---- 309 (371)
T PRK13520 271 ----------------------------AVMKYLGREGYRKVVERCMENTRWLAEELKER------G---FEPVIE---- 309 (371)
T ss_pred ----------------------------HHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC------C---CEEecC----
Confidence 57877766688899999999999999999875 2 342222
Q ss_pred CCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCC
Q 007454 476 DRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGIT 555 (603)
Q Consensus 476 ~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g 555 (603)
...++++|.+++ ...+.+.+.++||.++.+ . ..+
T Consensus 310 ~~~~~v~~~~~~-------~~~v~~~L~~~gi~v~~~---~------------------------------------~~~ 343 (371)
T PRK13520 310 PVLNIVAFDDPN-------PDEVREKLRERGWRVSVT---R------------------------------------CPE 343 (371)
T ss_pred CCceEEEEecCC-------HHHHHHHHHHCCceeccC---C------------------------------------CCC
Confidence 235688888762 234555445569988742 0 014
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHh
Q 007454 556 VVTASLGYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 556 ~VR~Slg~~tt~eDVd~l~~~l~~~l~ 582 (603)
++|+|+++++|.+||++|++.|+++++
T Consensus 344 ~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 344 ALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 799999999999999999999998764
No 36
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.91 E-value=1.6e-22 Score=217.08 Aligned_cols=311 Identities=11% Similarity=0.055 Sum_probs=204.2
Q ss_pred CCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCc-cccccch----HHHHHHHHHHHHHH
Q 007454 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQ----ESGLESAMKKRIMD 181 (603)
Q Consensus 107 ~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s-~~~~g~~----~~~~~~~aR~~Ia~ 181 (603)
...=|||+++++++.+.+++++.++..+. |++ .+..|.+ +.+.++++|++||+
T Consensus 10 ~s~~YL~~~~~~~~~~~~~~~~~~~~~~~----------------------p~~~~~~~gs~~~~g~~~~~~~~e~~la~ 67 (370)
T PRK05937 10 VTNDFLGFSRSDTLVHEVEKRYRLYCRQF----------------------PHAQLGYGGSRAILGPSSLLDDLEHKIAH 67 (370)
T ss_pred ECCCccCCCCCHHHHHHHHHHHHHhcccc----------------------CCCCCCCCCcCcccCChHHHHHHHHHHHH
Confidence 44569999999999999999988764321 222 2222333 56789999999999
Q ss_pred HcCCCCCcEEEeccCchHHHHHHHHHHcCCEEEEEec-----------------cCCccccCHHHHHHHHhhcCCCCCCe
Q 007454 182 FLNISENDYVYDYESEAVEAMIRTSEKRGARVMSAEF-----------------SWPRLRINSEKLRKMVVSKGKKKKQR 244 (603)
Q Consensus 182 ~lna~~~e~vf~~es~sV~~~~~~a~~~Ga~V~~~~~-----------------~~~~g~i~~~~L~~~l~~~~~~~~~t 244 (603)
++|++ +.++|.....+...+.....++|..|..-+. .+ ...+.++|++.|...++..+++
T Consensus 68 ~~~~~-~~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~--~~~d~~~l~~~l~~~~~~~~~~ 144 (370)
T PRK05937 68 FHGAP-EAFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSF--RHNDLDHLESLLESCRQRSFGR 144 (370)
T ss_pred HhCCC-eEEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEe--cCCCHHHHHHHHHhhhccCCCc
Confidence 99984 3465543332222221111122222221110 11 2357899999987422212356
Q ss_pred eEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCC----CCC---CcEEEEcccccCCCCCCceE
Q 007454 245 GLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLS----LVR---PDFLICSFYQIFGENPSGFG 316 (603)
Q Consensus 245 ~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls----~~~---~Dflv~S~hK~fG~~P~G~G 316 (603)
.+|++.+++|++|.++|++.| ++|+++|++++||++|..|+ .+.+.. .++ .|.++.|++|+|| |.|.|
T Consensus 145 ~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~--~g~~g~g~~~~~~~~~~~~~~~tlsK~~g--~~G~~ 220 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGI--FGDDGKGFCHSLGYENFYAVLVTYSKALG--SMGAA 220 (370)
T ss_pred EEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccc--cCCCCCchHHhhCCCCCcEEEEechhhhh--cCceE
Confidence 788899999999999999866 58999999999999999887 455542 233 2356788889999 88999
Q ss_pred EEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhH
Q 007454 317 CLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 396 (603)
Q Consensus 317 ~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~ 396 (603)
+|+.++ ....+.... + +.. +..| .+.++++++.
T Consensus 221 vl~~~~-~~~~~~~~~--~----------------------------~~~--~s~~-~~~~~~~a~~------------- 253 (370)
T PRK05937 221 LLSSSE-VKQDLMLNS--P----------------------------PLR--YSTG-LPPHLLISIQ------------- 253 (370)
T ss_pred EEcCHH-HHHHHHHhC--C----------------------------CCe--ecCC-CCHHHHHHHH-------------
Confidence 888754 221111000 0 011 2333 4555666655
Q ss_pred HHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCC
Q 007454 397 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 476 (603)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~ 476 (603)
++++++...| +.+.++++.|+++|.+.|... +
T Consensus 254 ---------------------------aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~--------------~------ 285 (370)
T PRK05937 254 ---------------------------VAYDFLSQEG-ELARKQLFRLKEYFAQKFSSA--------------A------ 285 (370)
T ss_pred ---------------------------HHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCC--------------C------
Confidence 6888887777 667889999999998877532 0
Q ss_pred CCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCE
Q 007454 477 RGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITV 556 (603)
Q Consensus 477 rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (603)
.++++.|.+++.+ ...+.+.++++||.++. +|.+ ..+.
T Consensus 286 ~~~~~~i~~~~~~-----~~~~~~~L~~~gi~v~~--~~~~-----------------------------------~~~~ 323 (370)
T PRK05937 286 PGCVQPIFLPGIS-----EQELYSKLVETGIRVGV--VCFP-----------------------------------TGPF 323 (370)
T ss_pred CCCEEEEEeCChh-----HHHHHHHHHHCCeeEEe--eCCC-----------------------------------CCCE
Confidence 1123446666532 34566666778998863 4421 1258
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 557 VTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 557 VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
||+|++++||.|||++|++.|++++++
T Consensus 324 iRis~~~~~t~edid~l~~~L~~~~~~ 350 (370)
T PRK05937 324 LRVNLHAFNTEDEVDILVSVLATYLEK 350 (370)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988754
No 37
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=99.90 E-value=2.6e-25 Score=240.96 Aligned_cols=371 Identities=19% Similarity=0.159 Sum_probs=261.3
Q ss_pred HHhhccCcCCCCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHH
Q 007454 97 RAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMK 176 (603)
Q Consensus 97 R~~efp~L~~~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR 176 (603)
|+.||..| .|||+++.+++++++.+....-.+ . -...|||++...+....+.++++|
T Consensus 14 r~~e~s~~-----~yldhag~tl~sesq~~g~~~~sq---~---------------~e~~nphs~~~ts~~l~~~v~Q~r 70 (728)
T KOG2142|consen 14 RDREFSRL-----AYLDHAGRTLFSESQLEGVAFQSQ---S---------------SENANPHSHLGTSRSLARLVAQVR 70 (728)
T ss_pred hhHHHHHH-----HHHHhhhhhhhhhcccchhhhhhh---c---------------cccCCCcccccchHHHHHHHHHHH
Confidence 67789887 399999999999999987432100 0 023678888766666779999999
Q ss_pred HHHHHHcCCCCCcE--EEeccCchHHHHHHHH-----------------------------HHcCCEEEEE-ec--cCCc
Q 007454 177 KRIMDFLNISENDY--VYDYESEAVEAMIRTS-----------------------------EKRGARVMSA-EF--SWPR 222 (603)
Q Consensus 177 ~~Ia~~lna~~~e~--vf~~es~sV~~~~~~a-----------------------------~~~Ga~V~~~-~~--~~~~ 222 (603)
-+|..+++....+| +|+...++..-+++.. .-.|.-+... .+ -|..
T Consensus 71 ~ril~~f~tta~dy~v~lp~~t~al~~vae~fp~~s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~i~~~ 150 (728)
T KOG2142|consen 71 LRILALFNTTAFDYEVSLPALTEALKLVAEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNEISDS 150 (728)
T ss_pred HHHHHHhccccccccchhHHHHHHHHHHHHhCccccccccccchhhhhhcccccccceeeeeeeccceEEeeeeeecccc
Confidence 99999999988777 2221001111111100 0011112211 11 0211
Q ss_pred cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEE
Q 007454 223 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKDMDSFGLSLVRPDFLI 301 (603)
Q Consensus 223 g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv 301 (603)
-... +-..... .....|+.+++++|+.|.++-..+|. +.-..+|+++|||+..+.. -+||++..++||+.
T Consensus 151 ~~~s---ls~~~~~----ls~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrvSa--f~Ldaesy~f~~~~ 221 (728)
T KOG2142|consen 151 EEFS---LSESEAN----LSEHSLFGGAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRVSA--FPLDAESYPFDFNP 221 (728)
T ss_pred cccc---ccccccC----cccchhcccchhcccccceeeeeeecccccCCceEEEEEeeccccc--ccchHhhCCCcccc
Confidence 1000 0000111 23578999999999999985555665 4447899999999999998 69999999999999
Q ss_pred EcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhh
Q 007454 302 CSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMS 381 (603)
Q Consensus 302 ~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~g 381 (603)
. +|||||+ |+ |+|.+.+...+.+ .||+++..-..+.++..+. ++ +++ +|.||.++-++++
T Consensus 222 ~-lltiFgy-et--gAvlv~~r~A~~~----Ggkt~sa~f~wp~~~l~s~----~l------kkr--~e~gk~~~kd~a~ 281 (728)
T KOG2142|consen 222 K-LLTIFGY-ET--GAVLVMNRSAELK----GGKTASAEFSWPMLYLLSE----KL------KKR--FEDGKLRFKDIAQ 281 (728)
T ss_pred h-heeecCC-Cc--hhhHHHhhhhHhh----cCccceeecccchHHHHHH----HH------HHH--Hhhccccccchhh
Confidence 9 9999998 87 8888877665322 3366543322222221111 12 234 7999999998877
Q ss_pred hhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 007454 382 IEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL--GLTMISRRGRCLINWLVNALMKLQHPN 459 (603)
Q Consensus 382 l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i--Gl~~i~~r~~~L~~~L~~~L~~L~h~~ 459 (603)
+- .++..+.++ |+..|..+...|.+++...|.++.|
T Consensus 282 gl----------------------------------------~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~~l-- 319 (728)
T KOG2142|consen 282 GL----------------------------------------FVFPTQSRVTGGMYSYSWMTLALANNWHVLLDALAL-- 319 (728)
T ss_pred he----------------------------------------eccchHhhhcccchhHHHHHHHHhhhHHHHHhhhcc--
Confidence 54 244444444 6999999999999999999999887
Q ss_pred CCCCceEEEeCCCC--CCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhh----hhHHHHHh
Q 007454 460 TEGNALVKIYGPKI--RFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQK----EKDNVLEK 533 (603)
Q Consensus 460 ~~g~plv~Iygp~~--~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~----~~~~~l~~ 533 (603)
|.|++++||-.. +.-.+++++||+...+|..++.-.|.|.+ ..||.+|+||+||+|+++.+++ +....+++
T Consensus 320 --G~kdmd~yglS~f~Pdfqg~sf~fv~g~d~psgfGcl~VkKs~-i~~l~lrtGcfcn~Gack~~pgl~~~~~~~~~~~ 396 (728)
T KOG2142|consen 320 --GPKDMDSYGLSLFQPDFQGPSFYFVFGRDDPSGFGCLEVKKSA-ISGLELRTGCFCNIGACKIYPGLYLEMSQKGLSA 396 (728)
T ss_pred --CcchHhhhhhhccCccceeeeEEEEeccCCCCceeeeeeehhh-hhceeccCCCCCCCcceeecccccHHHHHHHhhh
Confidence 789999999532 34579999999999889999999999998 9999999999999999988753 45666788
Q ss_pred hhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Q 007454 534 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQ 579 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~ 579 (603)
+.+|+|. + +.+ +| |+++|.+||+++..++..
T Consensus 397 g~~cgD~---d------g~~-----~s-~~~~~~~~~~a~~~~~v~ 427 (728)
T KOG2142|consen 397 GKGCGDN---D------GQP-----VS-GYMQTPADVGAYLSAQVS 427 (728)
T ss_pred ccccccC---C------CCc-----cc-ccccchhhhhHHHHHhhh
Confidence 8889863 1 222 78 999999999999987753
No 38
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.90 E-value=1.1e-21 Score=207.45 Aligned_cols=297 Identities=16% Similarity=0.161 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHHHcCCCCC--cEEEecc----------------------Cch-HHH-HHHHHHHcCCEEEEEeccCCc
Q 007454 169 SGLESAMKKRIMDFLNISEN--DYVYDYE----------------------SEA-VEA-MIRTSEKRGARVMSAEFSWPR 222 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~--e~vf~~e----------------------s~s-V~~-~~~~a~~~Ga~V~~~~~~~~~ 222 (603)
.+.++++|+.+++++|++++ ++++... ++. ... +...++..|.++..+++++ +
T Consensus 30 ~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~-~ 108 (355)
T TIGR03301 30 NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSE-Y 108 (355)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCC-C
Confidence 47789999999999999876 3444210 011 111 2455677899999999874 5
Q ss_pred cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEE
Q 007454 223 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLI 301 (603)
Q Consensus 223 g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv 301 (603)
..++.++|++.|..+ ++++++++++.+|.||.++|++.+ ++|+++|+++++|+++..+. .++++..+++|+++
T Consensus 109 ~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~--~~~~~~~~~~d~~~ 182 (355)
T TIGR03301 109 EPPDLNRIEEALAAD----PDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGA--IPIDIEELDVDALI 182 (355)
T ss_pred CCCCHHHHHHHHHhC----CCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCC--cccchhhcCccEEE
Confidence 678999999998742 357889999999999999999855 58999999999999988887 58899999999999
Q ss_pred EcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhh
Q 007454 302 CSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMS 381 (603)
Q Consensus 302 ~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~g 381 (603)
+|+||++++ |.|+|++++++++++.+......-..+. ...|.. ++ ... ...+|++...+++
T Consensus 183 ~s~~K~l~~-~~G~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-------~~-----~~~--~~~~t~~~~~~~a 243 (355)
T TIGR03301 183 ASANKCLEG-VPGFGFVIARRDLLEASAGNARSLYLDL----YDQWAY-------ME-----KTG--KWRFTPPTHTVYA 243 (355)
T ss_pred ecCCccccc-CCceeEEEECHHHHHHhhCCCCCceeeH----HHHHHH-------hh-----hcC--CCCCCCcHHHHHH
Confidence 999998754 7799999999988765542111100000 000000 00 000 1245777777766
Q ss_pred hhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 007454 382 IEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG-LTMISRRGRCLINWLVNALMKLQHPNT 460 (603)
Q Consensus 382 l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iG-l~~i~~r~~~L~~~L~~~L~~L~h~~~ 460 (603)
+. .+++.+.+.| ++.+.++.+.+.+++.+.|.++
T Consensus 244 ~~----------------------------------------~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~----- 278 (355)
T TIGR03301 244 FA----------------------------------------QALEELEAEGGVPARIARYRRNRELLVDGLRAL----- 278 (355)
T ss_pred HH----------------------------------------HHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 65 5888777666 8999999999999999999875
Q ss_pred CCCceEEEeCCCCCCCCCC-EEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccc
Q 007454 461 EGNALVKIYGPKIRFDRGP-ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAK 539 (603)
Q Consensus 461 ~g~plv~Iygp~~~~~rg~-ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~ 539 (603)
| ++++.+.. .+++ ++.|.+++.. ......+.+.+.++||.++.|..+
T Consensus 279 -g---~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~i~~~~~~------------------------ 326 (355)
T TIGR03301 279 -G---FQPLLPER--WQSPIIVSFLYPDDP--DFDFDDFYQELKERGFVIYPGKLT------------------------ 326 (355)
T ss_pred -C---CeeecCCC--CCCCcEEEEECCCCC--cchHHHHHHHHHHCCEEEECCccc------------------------
Confidence 2 45555532 2444 5678776421 122334555566789998765211
Q ss_pred cccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 007454 540 SKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 540 ~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l 581 (603)
.. +.||+|++.++|.+|++++++.|+++|
T Consensus 327 ------------~~-~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 327 ------------LA-DTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred ------------cc-cEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 11 589999999999999999999998754
No 39
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.90 E-value=5.1e-21 Score=204.47 Aligned_cols=310 Identities=14% Similarity=0.041 Sum_probs=211.4
Q ss_pred eeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCCCCc
Q 007454 110 TCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISEND 189 (603)
Q Consensus 110 vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~~~e 189 (603)
.+|++.+..|.+. +++++..+.... .++++ . +. ....+++++|+.|++++|+++++
T Consensus 23 ~~~~~~~~~~~~~-~~~a~~~~~~~~-------------------~~~~~-~--~~-~~~~~~~~~~~~la~~~g~~~~~ 78 (373)
T TIGR03812 23 RILGSMCTNPHPI-AVKAYDMFIETN-------------------LGDPG-L--FP-GTKKIEEEVVGSLGNLLHLPDAY 78 (373)
T ss_pred cEEEEEeCCchHH-HHHHHHHHhhcC-------------------CCCcc-c--Cc-cHHHHHHHHHHHHHHHhCCCCCC
Confidence 4788888876555 456655543210 12332 1 11 13467789999999999998766
Q ss_pred EEEeccC----------------------------chHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCC
Q 007454 190 YVYDYES----------------------------EAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKK 241 (603)
Q Consensus 190 ~vf~~es----------------------------~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~ 241 (603)
.++...+ .....+...++..|++++.++.++ ++.++.++|+++|.+
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~d~~~l~~~l~~----- 152 (373)
T TIGR03812 79 GYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDE-DYTVDVKDVEDLIDD----- 152 (373)
T ss_pred eEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCC-CCCcCHHHHHHHHhh-----
Confidence 5432111 112223445667799999999874 788999999999864
Q ss_pred CCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCC--------CCCCCCCCCCCCcEEEEcccccCCCCC
Q 007454 242 KQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPK--------DMDSFGLSLVRPDFLICSFYQIFGENP 312 (603)
Q Consensus 242 ~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~--------~m~~ldls~~~~Dflv~S~hK~fG~~P 312 (603)
++..+++...+|.||.+.|++.| ++|+++|++++||+++.++. ....+|+...++|++++|+|||++. |
T Consensus 153 -~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~-~ 230 (373)
T TIGR03812 153 -NTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLS-P 230 (373)
T ss_pred -CcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCC-c
Confidence 34333434468999999999866 58999999999999986431 0025777777899999999997554 7
Q ss_pred CceEEEEE-eCCCCcCcCC--CCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCc
Q 007454 313 SGFGCLFV-KKSTVPILVD--NTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGK 389 (603)
Q Consensus 313 ~G~G~L~v-kk~~~~~L~p--~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~ 389 (603)
.|.|++++ +++..+.+.. ++..+. ... ...||.+...++++.
T Consensus 231 ~~~G~~~~~~~~~~~~l~~~~~~~~~~---------------------------~~~--~~~gt~~~~~~~~~~------ 275 (373)
T TIGR03812 231 IPAGGILFRSKSYLKYLSVDAPYLTVK---------------------------KQA--TITGTRSGASAAATY------ 275 (373)
T ss_pred CCceEEEEeCHHHHhhhcccCcccCCC---------------------------CCc--ceEeechhHHHHHHH------
Confidence 78887776 4445443421 111100 001 235888888777665
Q ss_pred cccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEe
Q 007454 390 LEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIY 469 (603)
Q Consensus 390 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iy 469 (603)
.+++.+.+.|++++.++...++++|.++|+++.. ..++
T Consensus 276 ----------------------------------~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~--------~~~~ 313 (373)
T TIGR03812 276 ----------------------------------AVIKYLGREGYRKIVAECMENTRYLVEELKKIGF--------EPVI 313 (373)
T ss_pred ----------------------------------HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCC--------eEEc
Confidence 5888777778999999999999999999998631 3344
Q ss_pred CCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccC
Q 007454 470 GPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDK 549 (603)
Q Consensus 470 gp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 549 (603)
.| ..++|.|.+++. .++.++|. ++||.++.+
T Consensus 314 ~~-----~~~~v~~~~~~~------~~v~~~L~-~~gi~v~~~------------------------------------- 344 (373)
T TIGR03812 314 EP-----VLNIVAFEVDDP------EEVRKKLR-DRGWYVSVT------------------------------------- 344 (373)
T ss_pred CC-----CceEEEEEeCCH------HHHHHHHH-HCCceeccC-------------------------------------
Confidence 32 457899988652 23455554 569988642
Q ss_pred CCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Q 007454 550 ANLGITVVTASLGYLANFEDVYRLWAFVAQ 579 (603)
Q Consensus 550 ~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~ 579 (603)
....+||+|++.++|.+||++|++.|++
T Consensus 345 --~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 345 --RCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred --CCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 0114899999999999999999999875
No 40
>PLN03032 serine decarboxylase; Provisional
Probab=99.89 E-value=4.2e-21 Score=205.90 Aligned_cols=194 Identities=13% Similarity=0.162 Sum_probs=152.8
Q ss_pred CCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCC
Q 007454 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (603)
Q Consensus 107 ~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~ 186 (603)
+...||=|--..-+.+.+++++..++.+ ..+||.+.+.+|..+.++++++++.|+++||++
T Consensus 22 ~~~~~~gy~~~~~~~~~~~~~~~~~~~~-------------------~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~ 82 (374)
T PLN03032 22 KSSVHFGYPYNLDFDYGELSQLMKYSIN-------------------NLGDPFIESNYGVHSRQFEVGVLDWFARLWELE 82 (374)
T ss_pred hhhhccCCCchhccChHHHHHHHHhccc-------------------CCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC
Confidence 3456666766666777888888776431 248999998899999999999999999999999
Q ss_pred CCcE--EEec---cCc---------------------hHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCC
Q 007454 187 ENDY--VYDY---ESE---------------------AVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKK 240 (603)
Q Consensus 187 ~~e~--vf~~---es~---------------------sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~ 240 (603)
++++ +|+. |++ ++..+.+.++..|.++..+|++ ++|++|.++|++.|..+
T Consensus 83 ~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d-~~g~id~~~L~~~i~~~--- 158 (374)
T PLN03032 83 KDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTL-PSGEIDYDDLERALAKN--- 158 (374)
T ss_pred CccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeC-CCCcCcHHHHHHHHHHc---
Confidence 9887 7753 221 0111223344557778888887 68999999999999752
Q ss_pred CCCeeEEEEeCccccccccccHHHHH-HHHhCC-----cEEEEeccccCCCCCCCC-------CCCCCCCcEEEEccccc
Q 007454 241 KKQRGLFVFPLHSRMTGARYPYLWMR-IAQEND-----WHILIDACALGPKDMDSF-------GLSLVRPDFLICSFYQI 307 (603)
Q Consensus 241 ~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g-----~~vlvDAaq~~~~~m~~l-------dls~~~~Dflv~S~hK~ 307 (603)
...+.+|++++.+++||++.|++.|+ +|+++| +++||||||.+++ .++ |+. .++|.+++|+|||
T Consensus 159 ~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~--~p~~~~~~~~~~~-~~vDSis~s~HK~ 235 (374)
T PLN03032 159 RDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLM--MPFVSRAPEVTFR-KPIGSVSVSGHKF 235 (374)
T ss_pred CCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhh--hhccCCCcccCCC-cCCcEEEECcccc
Confidence 12578999999999999999999775 889886 5899999999887 564 554 3799999999999
Q ss_pred CCCCCCceEEEEEeCCCCcC
Q 007454 308 FGENPSGFGCLFVKKSTVPI 327 (603)
Q Consensus 308 fG~~P~G~G~L~vkk~~~~~ 327 (603)
+|. |.|+|+|++|+..+..
T Consensus 236 ~g~-P~g~G~ll~r~~~~~~ 254 (374)
T PLN03032 236 LGC-PMPCGVALTRKKHVKA 254 (374)
T ss_pred cCC-CcCeEEEEEEchhhHh
Confidence 998 9999999999876543
No 41
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.88 E-value=3.5e-20 Score=200.27 Aligned_cols=194 Identities=12% Similarity=0.025 Sum_probs=147.4
Q ss_pred eeeec-CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCc-cccccchHHHHHHHHHHHHHHHcCCCC
Q 007454 110 TCLDY-FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESGLESAMKKRIMDFLNISE 187 (603)
Q Consensus 110 vYLDy-aa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s-~~~~g~~~~~~~~~aR~~Ia~~lna~~ 187 (603)
|.||- .-.+|+++.+++++.++.. .++||++ .+..+......++++|+.+++++|+++
T Consensus 21 ~~~~~~~~~~p~~~~~~~a~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~ 80 (387)
T PRK09331 21 INLDPIQRGGILTPEARKALIEYGD--------------------GYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDE 80 (387)
T ss_pred cccChhhcCCCCCHHHHHHHHHHHh--------------------ccCCCcccccccccccChHHHHHHHHHHHHhCCCc
Confidence 44443 3578999999999987642 2256655 444444455679999999999999953
Q ss_pred CcEEEecc----------------------CchHHHHHHHHHHcCCEEEEEec--cCCccccCHHHHHHHHhhcCC-CCC
Q 007454 188 NDYVYDYE----------------------SEAVEAMIRTSEKRGARVMSAEF--SWPRLRINSEKLRKMVVSKGK-KKK 242 (603)
Q Consensus 188 ~e~vf~~e----------------------s~sV~~~~~~a~~~Ga~V~~~~~--~~~~g~i~~~~L~~~l~~~~~-~~~ 242 (603)
.+|... ..+.......++..|+++..++. ++ ++.++.++|++.|..... ..+
T Consensus 81 --~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~ 157 (387)
T PRK09331 81 --ARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYP-EYKITPEAYAEKIEEVKEETGK 157 (387)
T ss_pred --EEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCc-CCCcCHHHHHHHHHHhhhccCC
Confidence 333211 11222233446778999999998 43 678999999999864210 113
Q ss_pred CeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEe
Q 007454 243 QRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
++++|++.+.+|.||.+.|++.| ++|+++|+++++|+++..|. .+++...+++|++++|+||++|. |.|+|+|+++
T Consensus 158 ~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~--~~~~~~~~g~D~~~~s~~K~l~~-~~~~G~l~~~ 234 (387)
T PRK09331 158 PPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGR--MPVDGKKLGADFIVGSGHKSMAA-SAPSGVLATT 234 (387)
T ss_pred CCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCC--cCCCHHHcCCCEEEeeCcccccC-CCCEEEEEEC
Confidence 68999999999999999999866 58999999999999999998 68999899999999999999986 8899999999
Q ss_pred CCCCcCcC
Q 007454 322 KSTVPILV 329 (603)
Q Consensus 322 k~~~~~L~ 329 (603)
++.++.+.
T Consensus 235 ~~~i~~~~ 242 (387)
T PRK09331 235 EEYADKVF 242 (387)
T ss_pred HHHHhhcc
Confidence 88765553
No 42
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.87 E-value=2.6e-20 Score=218.51 Aligned_cols=302 Identities=13% Similarity=0.088 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEec----------------------------------cCchHHHHHHHHHHcCCEEE
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDY----------------------------------ESEAVEAMIRTSEKRGARVM 214 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~----------------------------------es~sV~~~~~~a~~~Ga~V~ 214 (603)
.++++++|+.+++++|+ ++++|.. +|+++.. .+...|.+|+
T Consensus 567 ~~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a---~a~~~G~~vv 641 (993)
T PLN02414 567 QEMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPA---SAAMCGMKIV 641 (993)
T ss_pred HHHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHH---HHHHCCCEEE
Confidence 68999999999999999 7776642 2233222 2334699999
Q ss_pred EEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCC
Q 007454 215 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLS 293 (603)
Q Consensus 215 ~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls 293 (603)
.++++ ++|.+|.++|+++|..+ +++|++|++++.||++|...|++.| ++||++|+.|++|++|..++ +...+..
T Consensus 642 ~v~~d-~~G~vDle~L~~~i~~~---~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~-~~l~~p~ 716 (993)
T PLN02414 642 VVGTD-AKGNINIEELRKAAEAH---KDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQ-VGLTSPG 716 (993)
T ss_pred EeccC-CCCCcCHHHHHHHHhcc---CCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhc-cCcCCcc
Confidence 99998 68999999999999742 2368999999999999999999866 58999999999999998887 2456667
Q ss_pred CCCCcEEEEcccccCCCCCCc-----eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccc
Q 007454 294 LVRPDFLICSFYQIFGENPSG-----FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQE 368 (603)
Q Consensus 294 ~~~~Dflv~S~hK~fG~~P~G-----~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 368 (603)
++++||+++|.||+|+. |.| +|+|++|+.+...|.....| .. ..+. .++ + .
T Consensus 717 ~~GaD~~~~s~HK~f~~-P~G~GGPg~G~l~~~~~L~p~lPg~~v~-~~------~~~~-~r~------~-----~---- 772 (993)
T PLN02414 717 FIGADVCHLNLHKTFCI-PHGGGGPGMGPIGVKKHLAPFLPSHPVV-PT------GGIP-RPE------K-----T---- 772 (993)
T ss_pred ccCCCEEEecCCccCCc-CcccCCCCeeeEEEchhhcccCCCCccc-cC------CCcc-ccc------C-----C----
Confidence 89999999999997764 554 99999999765433211111 10 0000 000 0 0
Q ss_pred cccCCCChhhh---hhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHH---HHHHH
Q 007454 369 KVAATNTFSGP---MSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMI---SRRGR 442 (603)
Q Consensus 369 ~e~GT~n~~gi---~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i---~~r~~ 442 (603)
---||.+.+.. +.+. +++.++..+|.+.+ .++..
T Consensus 773 s~iGt~~~a~~g~al~l~----------------------------------------~A~~yi~~lG~~Gl~~~a~~a~ 812 (993)
T PLN02414 773 QPLGTISAAPWGSALILP----------------------------------------ISYTYIAMMGSEGLTDASKIAI 812 (993)
T ss_pred CCcCCccchhhhhHHHHH----------------------------------------HHHHHHHHHCHhHHHHHHHHHH
Confidence 01355443221 1111 57888888876655 88999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEE-EccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCc
Q 007454 443 CLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFN-VFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSD 521 (603)
Q Consensus 443 ~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFn-v~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~ 521 (603)
.+++|+.++|.+.. . +.+.||....-+--++.+. +++..| ++...|++-+-++||...+-++
T Consensus 813 ~nAnYl~~rL~~~~--~------~~~~~~~~~~~hEfv~~~~~l~~~~g--~~~~di~krL~d~Gihapt~~~------- 875 (993)
T PLN02414 813 LNANYMAKRLEGHY--P------VLFRGKNGTCAHEFIIDLRPFKNTAG--IEPEDVAKRLMDYGFHAPTMSW------- 875 (993)
T ss_pred HHHHHHHHHHHhhC--C------ccccCCCCCeeeeEEEeccccccccC--CCHHHHHHHHHHcCcEEeeecc-------
Confidence 99999999997632 1 3344442111112233332 221112 3445555544478998654110
Q ss_pred hhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh-hhhccccc
Q 007454 522 KYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA-DFVEKARW 591 (603)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~-~f~~~~~~ 591 (603)
...+.+|++...+++.+|+|+|++++..+..+ .-|+.++|
T Consensus 876 ------------------------------pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~~~~g~~ 916 (993)
T PLN02414 876 ------------------------------PVPGTLMIEPTESESKAELDRFCDALISIREEIADIENGKA 916 (993)
T ss_pred ------------------------------ccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 01368999999999999999999999998887 43555554
No 43
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.86 E-value=1e-19 Score=213.65 Aligned_cols=332 Identities=15% Similarity=0.128 Sum_probs=210.4
Q ss_pred ccCcCCCCceeeecCCCCC----CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHH
Q 007454 101 YYQLSLSNHTCLDYFGIGL----FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMK 176 (603)
Q Consensus 101 fp~L~~~~~vYLDyaa~tl----~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR 176 (603)
|-.|..+|.+|++|.|.|+ +|..+++++...... +. +|..--| .. ..-..+.+.+.+
T Consensus 94 ~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~--------------~T-aytPYqa--Ei--sQG~lqal~~~Q 154 (993)
T PLN02414 94 MKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGW--------------YT-QYTPYQA--EI--AQGRLESLLNYQ 154 (993)
T ss_pred HHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHH--------------Hh-hcCCCch--HH--HHHHHHHHHHHH
Confidence 4445557889999999999 777777887653210 00 0100001 00 111356788999
Q ss_pred HHHHHHcCCCCCcEEEecc----------------------------Cch-HHHHHHHHHHcCCEEEEEeccCCccccCH
Q 007454 177 KRIMDFLNISENDYVYDYE----------------------------SEA-VEAMIRTSEKRGARVMSAEFSWPRLRINS 227 (603)
Q Consensus 177 ~~Ia~~lna~~~e~vf~~e----------------------------s~s-V~~~~~~a~~~Ga~V~~~~~~~~~g~i~~ 227 (603)
..|++++|++++++.+..+ +.+ +..+...+++.|++|+.++++. . +
T Consensus 155 t~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~--~--~- 229 (993)
T PLN02414 155 TMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKD--F--D- 229 (993)
T ss_pred HHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchh--h--c-
Confidence 9999999999998855322 222 2223344555666666665431 0 0
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCC-CCCCCCCcEEEEccc
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSF-GLSLVRPDFLICSFY 305 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~l-dls~~~~Dflv~S~h 305 (603)
... ..+ ..++.+..|.+|.+.|++.| ++||++|++|+| |++..+. ..+ ++.++++||++.++|
T Consensus 230 -----~~~------~~v-~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal--~~l~~pge~GADi~vgsgq 294 (993)
T PLN02414 230 -----YSS------GDV-CGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLAL--TMLKPPGEWGADIVVGSAQ 294 (993)
T ss_pred -----ccc------Cce-EEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHh--cCCCCHhhccCcEEEECCC
Confidence 000 112 23345666889999999855 689999999999 7776665 455 488999999999999
Q ss_pred ccCCCCCCc-----eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhh
Q 007454 306 QIFGENPSG-----FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPM 380 (603)
Q Consensus 306 K~fG~~P~G-----~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~ 380 (603)
||.+ |.| .|+|++|++....+.+.++|-++. ... ...+.. .+++.+ .+.+ +|-||.|+....
T Consensus 295 Kwg~--P~G~GGP~aGflavr~~~~r~~PgriVG~s~d-~~g-~~~~~l------~LqtRe-qhiR--rEkaTsNict~q 361 (993)
T PLN02414 295 RFGV--PMGYGGPHAAFLATSQEYKRLMPGRIIGVSVD-SSG-KPALRM------AMQTRE-QHIR--RDKATSNICTAQ 361 (993)
T ss_pred cccc--CCCCCCCCeeEEEECHHHHhhCCCcccCcccC-CCC-Cccccc------cccccc-chhh--hcccccchhHHH
Confidence 9973 555 799999998866443346652221 111 010000 011100 1233 689999998776
Q ss_pred hhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 007454 381 SIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNT 460 (603)
Q Consensus 381 gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~ 460 (603)
++.+ .+. ..-+.++-..|+.+|.+|+..|+.+|.++|.++
T Consensus 362 aL~A------------~la-----------------------~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~----- 401 (993)
T PLN02414 362 ALLA------------NMA-----------------------AMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL----- 401 (993)
T ss_pred HHHH------------HHH-----------------------HHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 6641 110 000223334799999999999999999999764
Q ss_pred CCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccc
Q 007454 461 EGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKS 540 (603)
Q Consensus 461 ~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~ 540 (603)
| +++.++ ....+|+|.+.+ +.+++++| .++||.+|.-
T Consensus 402 -G---~~~~~~----~~f~~vt~~~~~------~~~v~~~L-~~~gI~l~~~---------------------------- 438 (993)
T PLN02414 402 -G---FQVQSL----PFFDTVKVKCSD------ADAIADAA-AKVGINLRVV---------------------------- 438 (993)
T ss_pred -C---CccCCC----CCcCeEEEecCC------HHHHHHHH-HHCCCeeEEe----------------------------
Confidence 3 455554 234599999852 13345555 5679977521
Q ss_pred ccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Q 007454 541 KSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQ 579 (603)
Q Consensus 541 ~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~ 579 (603)
..+.||+|++.+||.+|||+|+++|+.
T Consensus 439 ------------~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 439 ------------DANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred ------------cCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 124799999999999999999999974
No 44
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.86 E-value=2.6e-19 Score=193.19 Aligned_cols=300 Identities=12% Similarity=0.032 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEecc----------------------------CchHHHHHH-HHHHcCCEEEEEecc
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDYE----------------------------SEAVEAMIR-TSEKRGARVMSAEFS 219 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~e----------------------------s~sV~~~~~-~a~~~Ga~V~~~~~~ 219 (603)
.++.+++++.+++++|++++++++... |.+...... ..++.|++++.++++
T Consensus 63 ~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~ 142 (398)
T cd00613 63 LQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSD 142 (398)
T ss_pred HHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccC
Confidence 367788999999999987766644321 111111111 112345788888776
Q ss_pred CCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccH-HHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 007454 220 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY-LWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRP 297 (603)
Q Consensus 220 ~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl-~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~ 297 (603)
+ .+.++.++|++.+.+ +|++|++.+.+ .||.+.|+ +.| ++|+++|+++++|++|..+. ..++...+++
T Consensus 143 ~-~~~~d~~~l~~~i~~------~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~--~~~~~~~~~~ 212 (398)
T cd00613 143 E-GGTVDLEALKEEVSE------EVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLT--GLKPPGEYGA 212 (398)
T ss_pred C-CCCcCHHHHHHhcCC------CeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEecccccc--CCCChHHcCC
Confidence 3 567889999998853 68999998875 79999996 866 58999999999999987665 4666677899
Q ss_pred cEEEEcccccCCCCC-----CceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccC
Q 007454 298 DFLICSFYQIFGENP-----SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 372 (603)
Q Consensus 298 Dflv~S~hK~fG~~P-----~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~G 372 (603)
|++++|+|||++ | .|.|+|+++++..+.+.+...|..... ..... +.. .+.... .+.+ ++.|
T Consensus 213 d~~~~s~~K~~~--p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~------~~~~~~-~~~r--~e~~ 279 (398)
T cd00613 213 DIVVGNLQKTGV--PHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDA-EGNRA-FRL------ALQTRE-QHIR--REKA 279 (398)
T ss_pred CEEEeeccccCC--CCCCCCCceeEEEEhhhhHhhCCCCeecccccc-CCCcc-eEE------ecccch-hhcc--cccc
Confidence 999999999983 4 368999999888776655444411100 00000 000 000000 0112 4678
Q ss_pred CCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 007454 373 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 452 (603)
Q Consensus 373 T~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L 452 (603)
|.++.+...+.. +... .+++.+...|++++.++.+.++++|.++|
T Consensus 280 ~~~~~~~~~~~~-----------~~a~------------------------~~l~~~~~~g~~~~~~~~~~~~~~l~~~L 324 (398)
T cd00613 280 TSNICTGQALLA-----------LMAA------------------------MYIVYLGPEGLKEIAERAHLNANYLAKRL 324 (398)
T ss_pred cccceecHHHHH-----------HHHH------------------------HHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 887665443321 1111 34454445588899999999999999999
Q ss_pred hcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHH
Q 007454 453 MKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLE 532 (603)
Q Consensus 453 ~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~ 532 (603)
.++.. ..+ +. ..+.++|.|.++...+ +....+.+.+.++||.+..-. .
T Consensus 325 ~~~~~--------~~~--~~--~~~~~~v~~~~~~~~~--~~~~~~~~~L~~~gi~~~~~~---------~--------- 372 (398)
T cd00613 325 KEVGG--------VLP--FN--GPFFHEFVLRLPPLYG--IRAEDLAKALIDGGFHAPTMY---------L--------- 372 (398)
T ss_pred HhcCC--------ccc--CC--CCeeEEEEEEcCCcch--HHHHHHHHhhhhcCccccccc---------c---------
Confidence 88631 111 11 2345678888764211 122334333345677532100 0
Q ss_pred hhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHH
Q 007454 533 KTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFV 577 (603)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l 577 (603)
...+.||+|+++|||.||||++++.|
T Consensus 373 -------------------~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 373 -------------------PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred -------------------CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 11268999999999999999998764
No 45
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.84 E-value=1.1e-18 Score=193.77 Aligned_cols=295 Identities=13% Similarity=0.063 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEeccC-c-----------------------------hHHHHHHHHHHcCCEEEEEec
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDYES-E-----------------------------AVEAMIRTSEKRGARVMSAEF 218 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~es-~-----------------------------sV~~~~~~a~~~Ga~V~~~~~ 218 (603)
.+++.+.++.+++++|.+. ..+++... . ........++..|++++.+++
T Consensus 112 lel~~~~~~~la~l~G~~~-~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~ 190 (481)
T PRK04366 112 LELMYELQEWLKEITGMDA-VTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS 190 (481)
T ss_pred HHHHHHHHHHHHHHhCCCc-eEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeec
Confidence 4677888899999988852 22232110 0 011112234556888999888
Q ss_pred cCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCcccccccc-ccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCC
Q 007454 219 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGAR-YPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVR 296 (603)
Q Consensus 219 ~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~-~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~ 296 (603)
+ .++.++.++|+++|.. +|+++++.. .|.||.. .|++.| ++||++|++++||++|.++.- ..++..+++
T Consensus 191 ~-~~~~~D~e~L~~~i~~------~t~~V~v~~-Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~-g~~~~~~~G 261 (481)
T PRK04366 191 N-EDGLVDLEALKAAVGE------DTAALMLTN-PNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAIL-GKARPGDMG 261 (481)
T ss_pred C-CCCCcCHHHHHhhccc------CCeEEEEeC-CCCccccchHHHHHHHHHHHcCCEEEEEecChhhhc-ccCCccccC
Confidence 7 4688999999998863 578888887 4589987 589855 589999999999999986631 235677899
Q ss_pred CcEEEEcccccCCCCCC-----ceEEEEEeCCCCcCcCCCCCC--CceeccccccccccccccCCCCCCcccCccccccc
Q 007454 297 PDFLICSFYQIFGENPS-----GFGCLFVKKSTVPILVDNTSS--GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEK 369 (603)
Q Consensus 297 ~Dflv~S~hK~fG~~P~-----G~G~L~vkk~~~~~L~p~~~g--G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 369 (603)
+|++++++|||||. |. |+|+|++|+.....+.+..+| |. .++... + + + ++ .++ +
T Consensus 262 aD~~~~~~hK~l~~-P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~-~~~l~~-~----r-------~--~~-i~r--~ 322 (481)
T PRK04366 262 FDVVHLNLHKTFST-PHGGGGPGSGPVGVKEELAPFLPVPVVEKDGD-RYRLDY-D----R-------P--KS-IGR--V 322 (481)
T ss_pred CCEEEEechhhcCC-CCCCCCCCeeeeeehhhhHhhCCCCeeeccCC-ceeecc-c----c-------c--cc-CCC--c
Confidence 99999999999875 54 567999999887777655444 21 111100 0 0 0 00 123 4
Q ss_pred ccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcC---HHHHHHHHHHHHH
Q 007454 370 VAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLG---LTMISRRGRCLIN 446 (603)
Q Consensus 370 e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iG---l~~i~~r~~~L~~ 446 (603)
+++|.+..+++ +++.++..+| +.++.++...+++
T Consensus 323 ~a~t~~~l~~~-------------------------------------------~a~~~l~~~G~~Gl~~~a~~~~~~a~ 359 (481)
T PRK04366 323 RAFYGNFGVLV-------------------------------------------RAYAYIRSLGAEGLREVSEDAVLNAN 359 (481)
T ss_pred ccccCchHHHH-------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66776543322 3555665565 5577778888999
Q ss_pred HHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEc--cCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhh
Q 007454 447 WLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVF--DWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQ 524 (603)
Q Consensus 447 ~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~--~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~ 524 (603)
||.++|.++. . +. +.. .....+.|... ..+| ++...|.+.+.++||.++.- ..
T Consensus 360 ~l~~~L~~~~--~------~~-~~~----~~~~~~~~~~~~~~~~g--~~~~~v~~~L~~~Gi~~~~~---~~------- 414 (481)
T PRK04366 360 YLKARLKDIY--D------LP-YDR----PCMHEFVLSGKKLKETG--VRTLDIAKRLLDYGFHPPTI---YF------- 414 (481)
T ss_pred HHHHHhHhhC--c------cc-CCC----CeeEEEEEECccccccC--CCHHHHHHHHHHCCccCCcc---cc-------
Confidence 9999998761 1 21 211 11112222211 1122 34556666666789886511 00
Q ss_pred hhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Q 007454 525 KEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADF 585 (603)
Q Consensus 525 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~f 585 (603)
.....+.+|+|++.+||.+|||+|++.|+++.++..
T Consensus 415 -------------------------p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~ 450 (481)
T PRK04366 415 -------------------------PLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAK 450 (481)
T ss_pred -------------------------ccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 011136899999999999999999999999877654
No 46
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.83 E-value=4.8e-19 Score=187.15 Aligned_cols=264 Identities=14% Similarity=0.099 Sum_probs=183.3
Q ss_pred hHHHHHHHHHHHHHHHcCCC--CCcEEEeccC-ch-----------------------------------HHHHHHHHHH
Q 007454 167 QESGLESAMKKRIMDFLNIS--ENDYVYDYES-EA-----------------------------------VEAMIRTSEK 208 (603)
Q Consensus 167 ~~~~~~~~aR~~Ia~~lna~--~~e~vf~~es-~s-----------------------------------V~~~~~~a~~ 208 (603)
...++++++++.+++++|++ +.+.+|+... ++ ...+...++.
T Consensus 35 ~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~ 114 (345)
T cd06450 35 AATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAY 114 (345)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHH
Confidence 35678899999999999986 3466665321 11 1112233344
Q ss_pred cCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCC
Q 007454 209 RGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDM 287 (603)
Q Consensus 209 ~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m 287 (603)
.|.+++.++++ +++.++.++|+++|.+......+++++++++.+|.||.+.|++.| ++|+++|+++++|+++..+.
T Consensus 115 ~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~-- 191 (345)
T cd06450 115 LDVKVRLVPVD-EDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFL-- 191 (345)
T ss_pred HhcCeEEeeeC-CCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHH--
Confidence 57788888877 467899999999997422222357899999999999999999866 58999999999999988876
Q ss_pred CCCCCC------CCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCccc
Q 007454 288 DSFGLS------LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQ 361 (603)
Q Consensus 288 ~~ldls------~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~ 361 (603)
.+++.. ..++|++++|+|||++. |.|.|++++| .. ..|
T Consensus 192 ~~~~~~~~~~~~~~~~d~~~~s~~K~l~~-p~g~g~~~~~--------------~~-------~~~-------------- 235 (345)
T cd06450 192 LPFPEPRHLDFGIERVDSISVDPHKYGLV-PLGCSAVLVR--------------AL-------KLW-------------- 235 (345)
T ss_pred hhChhhHHHhcCccccCEEEEchhHhhCC-CcchHHHHHH--------------HH-------HHH--------------
Confidence 343322 23799999999998875 8899998877 00 000
Q ss_pred CcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHH
Q 007454 362 TSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRG 441 (603)
Q Consensus 362 ~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~ 441 (603)
.+++.+...|++.+.++.
T Consensus 236 --------------------------------------------------------------~~l~~l~~~g~~~~~~~~ 253 (345)
T cd06450 236 --------------------------------------------------------------ATLRRFGRDGYGEHIDRI 253 (345)
T ss_pred --------------------------------------------------------------HHHHHHhHHHHHHHHHHH
Confidence 355555555788889999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCc
Q 007454 442 RCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSD 521 (603)
Q Consensus 442 ~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~ 521 (603)
..+++++.+.|.+++ .++++++. +.+++.|.+.+....-+....+.+.+.++|+.+..+...
T Consensus 254 ~~~~~~l~~~L~~~~--------~~~~~~~~----~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~------ 315 (345)
T cd06450 254 VDLAKYLAELIRADP--------GFELLGEP----NLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTL------ 315 (345)
T ss_pred HHHHHHHHHHHhcCC--------CeEEecCC----ceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEE------
Confidence 999999999998763 26777652 478999998752000022233444344555443322100
Q ss_pred hhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCC-CCHHHHHHHHHHHHH
Q 007454 522 KYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYL-ANFEDVYRLWAFVAQ 579 (603)
Q Consensus 522 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~-tt~eDVd~l~~~l~~ 579 (603)
...+.+|+|++.+ ||.+||++|++.|++
T Consensus 316 ------------------------------~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 316 ------------------------------GGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ------------------------------CCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 0125899999986 699999999999875
No 47
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.83 E-value=8.2e-18 Score=179.75 Aligned_cols=188 Identities=11% Similarity=0.042 Sum_probs=139.9
Q ss_pred CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCc-cccccchHHHHHHHHHHHHHHHcCCCCCcEEEecc
Q 007454 117 IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT-QLLHGGQESGLESAMKKRIMDFLNISENDYVYDYE 195 (603)
Q Consensus 117 ~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s-~~~~g~~~~~~~~~aR~~Ia~~lna~~~e~vf~~e 195 (603)
.+++.+.+++++..+.. .++|+++ .+..+......+.+.|+++++++|+ +++++...
T Consensus 10 ~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g 67 (361)
T cd06452 10 GGRLTPEARKALIEWGD--------------------GYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPG 67 (361)
T ss_pred CCCCCHHHHHHHHHHhc--------------------ccCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCC
Confidence 35778888888876532 2356654 3333333445788999999999999 56655321
Q ss_pred C----------------------chHHHHHHHHHHcCCEEEEEeccCC-ccccCHHHHHHHHhhcCCC-CCCeeEEEEeC
Q 007454 196 S----------------------EAVEAMIRTSEKRGARVMSAEFSWP-RLRINSEKLRKMVVSKGKK-KKQRGLFVFPL 251 (603)
Q Consensus 196 s----------------------~sV~~~~~~a~~~Ga~V~~~~~~~~-~g~i~~~~L~~~l~~~~~~-~~~t~Lv~~~~ 251 (603)
+ .+...+...++..|++++.+++++. +..++.++|++.+....+. .++++++.+++
T Consensus 68 ~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~ 147 (361)
T cd06452 68 AREGKFAVMHSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTH 147 (361)
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEEC
Confidence 1 1122233456778999999998852 2388999999988631110 13689999999
Q ss_pred ccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcC
Q 007454 252 HSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 252 ~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~ 329 (603)
.+|.||...|++.+ ++|+++|++|++|+++..|. .++++..++.|++++|+||+||. |.|+|+|+++++.++.+.
T Consensus 148 p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~--~~~~~~~~~~d~~~~s~~K~l~~-~~~~G~l~~~~~~~~~l~ 223 (361)
T cd06452 148 VDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGR--MPVSGKELGADFIVGSGHKSMAA-SAPIGVLATTEEWADIVF 223 (361)
T ss_pred CCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCC--cCCCHHHcCCCEEEecCCccccC-CCCeEEEEECHHHHHHHh
Confidence 99999999999855 58999999999999999887 57888888999999999999985 779999999987766554
No 48
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.82 E-value=2.3e-18 Score=185.58 Aligned_cols=325 Identities=12% Similarity=0.136 Sum_probs=206.0
Q ss_pred ceeeecCCCCC----CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcC
Q 007454 109 HTCLDYFGIGL----FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLN 184 (603)
Q Consensus 109 ~vYLDyaa~tl----~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~ln 184 (603)
.-|+|.+++.+ .++.+++++.+.+.. +..+++++.+..|. .....+.|++|++++|
T Consensus 38 ~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~------------------~~~~~~~s~~~~G~--~~~~~~le~~ia~~~g 97 (393)
T TIGR01822 38 REVLNFCANNYLGLSSHPDLIQAAKDALDE------------------HGFGMSSVRFICGT--QDIHKELEAKIAAFLG 97 (393)
T ss_pred ceEEEeeCCCccccCCCHHHHHHHHHHHHH------------------hCCCCCCcCcccCC--hHHHHHHHHHHHHHhC
Confidence 44555555542 356677776654321 11255666655554 4567889999999999
Q ss_pred CCCCcEEEeccCchHHHHHHHHHHcCCEEEEEeccCCc---------------cccCHHHHHHHHhhcCCCCCCeeEEEE
Q 007454 185 ISENDYVYDYESEAVEAMIRTSEKRGARVMSAEFSWPR---------------LRINSEKLRKMVVSKGKKKKQRGLFVF 249 (603)
Q Consensus 185 a~~~e~vf~~es~sV~~~~~~a~~~Ga~V~~~~~~~~~---------------g~i~~~~L~~~l~~~~~~~~~t~Lv~~ 249 (603)
.+ +.++|....++...+....-+.|.+|...+..++. ..++.++|++.|......+.+|+++++
T Consensus 98 ~~-~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~ 176 (393)
T TIGR01822 98 TE-DTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEARAAGARHRLIAT 176 (393)
T ss_pred CC-cEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEE
Confidence 84 56666544444444444444566666654433221 125889999988742111236899999
Q ss_pred eCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCC-------CCCCCCCCCcEEEEcccccCCCCCCceEEEEEe
Q 007454 250 PLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMD-------SFGLSLVRPDFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 250 ~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~-------~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
++++|+||.+.|++.| ++|+++|+++++|++|..+..-. .+++. .++|++++|+||++|+ + ..|+++.+
T Consensus 177 ~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l~g-~-r~G~~~~~ 253 (393)
T TIGR01822 177 DGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKALGG-A-SGGFTTAR 253 (393)
T ss_pred eCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHhhC-C-CcEEEEeC
Confidence 9999999999999866 58999999999999986654100 12332 2689999999999984 4 46999988
Q ss_pred CCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhh
Q 007454 322 KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRA 401 (603)
Q Consensus 322 k~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~ 401 (603)
+++++.+.+... . + .-.+|.+...++++.
T Consensus 254 ~~~~~~l~~~~~-----------~-~---------------------~~~~~~~~~~~~a~~------------------ 282 (393)
T TIGR01822 254 KEVVELLRQRSR-----------P-Y---------------------LFSNSLPPAVVGASI------------------ 282 (393)
T ss_pred HHHHHHHHHhCc-----------c-c---------------------eecCCCCHHHHHHHH------------------
Confidence 877654432100 0 0 013344443333322
Q ss_pred hhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEE
Q 007454 402 EADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPAL 481 (603)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~iv 481 (603)
++++.++ +++.+.++++.+++++.+.|.++ | +.++++ .++++
T Consensus 283 ----------------------~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~-----~~~~~ 324 (393)
T TIGR01822 283 ----------------------KVLEMLE--ASNELRDRLWANTRYFRERMEAA------G---FDIKPA-----DHPII 324 (393)
T ss_pred ----------------------HHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc------C---CCCCCC-----CCCEE
Confidence 4666553 46778889999999999999864 2 233332 34677
Q ss_pred EEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEec
Q 007454 482 AFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASL 561 (603)
Q Consensus 482 sFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Sl 561 (603)
.+.+.+. .-..++..+|+ ++||.++ |..+ +. . ..+...||+|+
T Consensus 325 ~i~~~~~---~~~~~l~~~L~-~~gI~v~-~~~~-~~-~------------------------------~~~~~~iRis~ 367 (393)
T TIGR01822 325 PVMLYDA---VLAQRFARRLL-EEGIYVT-GFFY-PV-V------------------------------PKGQARIRVQI 367 (393)
T ss_pred EEEeCCH---HHHHHHHHHHH-HCCeeEe-eeCC-CC-C------------------------------CCCCceEEEEE
Confidence 7766541 01123344554 5699997 4322 10 0 01124699999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhh
Q 007454 562 GYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 562 g~~tt~eDVd~l~~~l~~~l~~ 583 (603)
++++|.+||+++++.|++.+.+
T Consensus 368 ~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 368 SAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987653
No 49
>PLN02452 phosphoserine transaminase
Probab=99.81 E-value=3.5e-18 Score=183.13 Aligned_cols=323 Identities=13% Similarity=0.106 Sum_probs=217.6
Q ss_pred CceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccC--ccccccchHHHHHHHHHHHHHHHcCC
Q 007454 108 NHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLK--TQLLHGGQESGLESAMKKRIMDFLNI 185 (603)
Q Consensus 108 ~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~--s~~~~g~~~~~~~~~aR~~Ia~~lna 185 (603)
.++|+=.+|=+.+|+.|++++.+.+... + ....+ ...+.+..-.++++++++.+.++|++
T Consensus 6 ~~~~~f~pGP~~lp~~Vl~~~~~~~~~~---------~---------~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~ 67 (365)
T PLN02452 6 GRVFNFSAGPATLPANVLAKAQAELYNW---------E---------GSGMSVMEMSHRGKEFLSIIQKAEADLRELLDI 67 (365)
T ss_pred CceEeeeCCCCCCCHHHHHHHHHHHhcc---------c---------ccCccccccCCCchHHHHHHHHHHHHHHHHhCC
Confidence 3567767788889999999987532210 0 00000 00001223468999999999999998
Q ss_pred CCC-cEEEeccC-----------------------ch--HHHHHHHHHHcCCEEEEEeccCCcc---ccCHHHHHHHHhh
Q 007454 186 SEN-DYVYDYES-----------------------EA--VEAMIRTSEKRGARVMSAEFSWPRL---RINSEKLRKMVVS 236 (603)
Q Consensus 186 ~~~-e~vf~~es-----------------------~s--V~~~~~~a~~~Ga~V~~~~~~~~~g---~i~~~~L~~~l~~ 236 (603)
+++ +++|..-+ +. -..+.+.+++.|.........| .. .++.+++ ..
T Consensus 68 p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~-~~~~~~~~~~~~----~~ 142 (365)
T PLN02452 68 PDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKD-EKYTKIPSVSEW----EL 142 (365)
T ss_pred CCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCC-CCCCCCCChHHc----CC
Confidence 543 45553221 10 1224556677776444442222 22 2344443 11
Q ss_pred cCCCCCCeeEEEEeCcccccccc-ccHHHHHHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCce
Q 007454 237 KGKKKKQRGLFVFPLHSRMTGAR-YPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGF 315 (603)
Q Consensus 237 ~~~~~~~t~Lv~~~~~Sn~TG~~-~pl~~i~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~ 315 (603)
.++...|.+.|..-.||+. +|+..+. ++.++|||+|.+++ .++|++++++|| +|+||.+| |.|+
T Consensus 143 ----~~~~~~v~~~hnETstGv~~~~~~~i~-----~~~lvVDa~Ss~g~--~pidv~~~~v~~--~saqK~lG--P~Gl 207 (365)
T PLN02452 143 ----TPDAKFVHICANETIHGVEFKDYPDVG-----NVPLVADMSSNFLS--KPVDVSKYGVIY--AGAQKNVG--PSGV 207 (365)
T ss_pred ----CCCCcEEEECCCCCCCcEecCcccccC-----CCeEEEECCccccC--cccCHHHcCEEE--EecccccC--CCCe
Confidence 2367899999999999995 8876553 38999999999999 799999999988 59999999 8899
Q ss_pred EEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchh
Q 007454 316 GCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEI 395 (603)
Q Consensus 316 G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i 395 (603)
|++++|+++++.+++.. .... + |... .+ .. --.+|||+.+|+++.
T Consensus 208 ~~v~vr~~~l~~~~~~~-~~~~-------~-~~~~------~~------~~--s~~~TP~v~~i~~l~------------ 252 (365)
T PLN02452 208 TIVIIRKDLIGNARPIT-PGML-------D-YKIH------AE------ND--SLYNTPPCFGIYMCG------------ 252 (365)
T ss_pred EEEEEcHHHHhhcccCC-Cchh-------h-HHHH------Hh------cC--CccCChhHHHHHHHH------------
Confidence 99999999976654311 1111 1 1000 00 00 124899999999987
Q ss_pred HHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCC-
Q 007454 396 SEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKI- 473 (603)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~- 473 (603)
.+|+++.+. |++.+.+|.+.++++|++.|.++. | + |++..
T Consensus 253 ----------------------------~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~-----G---~--y~~~~~ 294 (365)
T PLN02452 253 ----------------------------LVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESN-----G---F--YVCPVE 294 (365)
T ss_pred ----------------------------HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC-----C---c--ccCCCC
Confidence 699999886 899999999999999999998753 2 2 55432
Q ss_pred CC-CCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCC
Q 007454 474 RF-DRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANL 552 (603)
Q Consensus 474 ~~-~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 552 (603)
+. ++..+|+|++++.+ ..+.+.+.+.++||..--| ..
T Consensus 295 ~~~rs~~~vsF~~~~~~----~~~~f~~~~~~~g~~~~~G--------------------------------------~r 332 (365)
T PLN02452 295 KSVRSLMNVPFTLGGSE----LEAEFVKEAAKAGMVQLKG--------------------------------------HR 332 (365)
T ss_pred hHHhCCeEEEEEcCCch----hHHHHHHHHHHCCCcccCC--------------------------------------cc
Confidence 12 35669999998853 2334555666778764332 11
Q ss_pred CCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 553 GITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 553 ~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
..|.+|||+=---+.|||++|++|+++|-.+
T Consensus 333 ~~gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 333 SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred ccCceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 1234999998889999999999999998643
No 50
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.7e-17 Score=168.78 Aligned_cols=358 Identities=14% Similarity=0.150 Sum_probs=244.9
Q ss_pred hHHHHHHhhccCcCCCCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHH
Q 007454 92 QIDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGL 171 (603)
Q Consensus 92 ~vd~iR~~efp~L~~~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~ 171 (603)
.+..+|.. |.-- .+.||||-+.-+..|+.+..+..+.... .|.- .-..|.......+-++
T Consensus 18 pl~~lr~~-f~lp--~~viyLdgnSLGa~p~~~~a~~~q~a~d--------eW~~---------~lirsw~~a~~~W~~l 77 (407)
T COG3844 18 PLAKLRDR-FALP--GGVIYLDGNSLGARPRAVTARLQQVATD--------EWGE---------GLIRSWNKAKADWFDL 77 (407)
T ss_pred chhhhHhh-ccCC--CCeEEeeccccccCchHHHHHHHHHHHH--------HHHh---------hhhhhhcccCCchhhc
Confidence 45677773 6544 6799999999999996655543221100 0110 0000000000112345
Q ss_pred HHHHHHHHHHHcCCCCCcEEEeccC-chHHHHH-HHHH-HcCCEEEEEecc-CC-------------------ccccCHH
Q 007454 172 ESAMKKRIMDFLNISENDYVYDYES-EAVEAMI-RTSE-KRGARVMSAEFS-WP-------------------RLRINSE 228 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~vf~~es-~sV~~~~-~~a~-~~Ga~V~~~~~~-~~-------------------~g~i~~~ 228 (603)
-+..=.+++-++|+.++|++....+ -.+.... ...+ +.|-+|...+-+ .| .+.+.++
T Consensus 78 p~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~ 157 (407)
T COG3844 78 PERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPR 157 (407)
T ss_pred hhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChH
Confidence 5667788999999999998765433 2222222 2222 225555544311 11 1345667
Q ss_pred HHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccc
Q 007454 229 KLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQI 307 (603)
Q Consensus 229 ~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~ 307 (603)
++.+.+.. ++.+|.+++++.-||..+++..| ++||++|+++..|-+.++|- .|+||...++||-+.+.||.
T Consensus 158 ~~~~~~~d------d~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGa--vp~~Lh~~gaDfaigcsyKY 229 (407)
T COG3844 158 ALEEAITD------DVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGA--VPVDLHAAGADFAIGCSYKY 229 (407)
T ss_pred HHHHhhcc------ceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCC--cceeecccCCCeeeeeecee
Confidence 77777764 79999999999999999999976 58999999999999999998 79999999999999999997
Q ss_pred C-CCCCCceEEEEEeCCCCcCcCCCCCC--CceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhh
Q 007454 308 F-GENPSGFGCLFVKKSTVPILVDNTSS--GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEM 384 (603)
Q Consensus 308 f-G~~P~G~G~L~vkk~~~~~L~p~~~g--G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~ 384 (603)
+ |+ |.+.++|||.+...+.-.|+..| |-.. -.+..+ .+++..+ .++ |..||+++.+...+.
T Consensus 230 LNgG-PGapa~l~v~~~h~e~~~~~lsgW~gha~-pf~m~~----------~y~p~~g-a~r--f~~gt~~V~s~aal~- 293 (407)
T COG3844 230 LNGG-PGAPAGLFVAPRHRERSWPPLSGWWGHAR-PFAMEE----------VYAPGPG-ARR--FLCGTQPVLSLAALE- 293 (407)
T ss_pred ccCC-CCCceeEEeccccccccccccccccCCCC-cchhhh----------ccCcCcc-ccc--eeeCCcchhhhHHHh-
Confidence 5 44 99999999998877655556555 4210 000000 1122111 122 789999888776654
Q ss_pred hhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCc
Q 007454 385 RQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNA 464 (603)
Q Consensus 385 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~p 464 (603)
.+||...+++|....+|...|++++++-+..... .-
T Consensus 294 ---------------------------------------~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~-----~~ 329 (407)
T COG3844 294 ---------------------------------------GALDIFADVDITELRKKSLALTDYFIELVEARCE-----YY 329 (407)
T ss_pred ---------------------------------------hhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccc-----cC
Confidence 6999999999999999999999999887766432 11
Q ss_pred eEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccccccc
Q 007454 465 LVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDN 544 (603)
Q Consensus 465 lv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 544 (603)
.++|.+|....+||+-|||..+. .+.++|.| ..+||..
T Consensus 330 ~l~l~tPr~~~~rGsqvS~~hp~------~~~V~qaL-i~rGVig----------------------------------- 367 (407)
T COG3844 330 GLTLVTPRAHEERGSQVSLYHPH------GYQVMQAL-IDRGVIG----------------------------------- 367 (407)
T ss_pred CcEEeccchhhhccceeeEecCc------HHHHHHHH-HHcCccc-----------------------------------
Confidence 37888998878999999999984 34445554 4455531
Q ss_pred ccccCCCCCCCEEEEecC-CCCCHHHHHHHHHHHHHHHhhh
Q 007454 545 NRKDKANLGITVVTASLG-YLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 545 ~~~~~~~~~~g~VR~Slg-~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
+.++.+++|+.|. +|++|+||+..++.|.+.|+..
T Consensus 368 -----D~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 368 -----DFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred -----cccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 2234479999987 5799999999999999998763
No 51
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=1.9e-17 Score=183.34 Aligned_cols=335 Identities=15% Similarity=0.105 Sum_probs=215.5
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccch-HHHHHHHHHHHHHHHcCCCCCcEEEe
Q 007454 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQ-ESGLESAMKKRIMDFLNISENDYVYD 193 (603)
Q Consensus 115 aa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~-~~~~~~~aR~~Ia~~lna~~~e~vf~ 193 (603)
++-...|+.++++....+++- |..+.|.+....|.. ..++++-++++.+++|++.++++.+.
T Consensus 41 asen~~s~~v~~a~~s~~~~k-----------------y~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~n 103 (475)
T PLN03226 41 ASENFTSRAVMEALGSCLTNK-----------------YSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVN 103 (475)
T ss_pred cCCccCCHHHHHHHhhHHhcc-----------------ccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEe
Confidence 677788999999977654211 122455555444433 35666779999999999998888663
Q ss_pred cc----CchHHHHHHHHHHcCCEEEE-----------------------------Eec--cCCccccCHHHHHHHHhhcC
Q 007454 194 YE----SEAVEAMIRTSEKRGARVMS-----------------------------AEF--SWPRLRINSEKLRKMVVSKG 238 (603)
Q Consensus 194 ~e----s~sV~~~~~~a~~~Ga~V~~-----------------------------~~~--~~~~g~i~~~~L~~~l~~~~ 238 (603)
-. +.+...+....-+.|.+|.. +++ +..++.||.++|++++...
T Consensus 104 v~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~- 182 (475)
T PLN03226 104 VQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLF- 182 (475)
T ss_pred cCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc-
Confidence 11 11222222222233444332 122 2246788999999998642
Q ss_pred CCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCCCCCCCCCC---CCCcEEEEcccccCCCCCCc
Q 007454 239 KKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKDMDSFGLSL---VRPDFLICSFYQIFGENPSG 314 (603)
Q Consensus 239 ~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~m~~ldls~---~~~Dflv~S~hK~fG~~P~G 314 (603)
+++++++. .| ++|...|++.+. +|+++|++++||++|.+|. ...++.. .++|++++++||++++ |.|
T Consensus 183 ----~pklIv~~-~S-~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gl--i~~~~~~~p~~~~Div~~t~hK~L~G-P~G 253 (475)
T PLN03226 183 ----RPKLIIAG-AS-AYPRDWDYARMRKIADKVGALLMCDMAHISGL--VAAQEAASPFEYCDVVTTTTHKSLRG-PRG 253 (475)
T ss_pred ----CCeEEEEe-cC-cCCCccCHHHHHHHHHHcCCEEEEEchhhhCc--ccCCCCCCCCCCCeEEEecCcccccC-CCc
Confidence 45666653 44 489999999664 8999999999999999887 4555332 2799999999999844 999
Q ss_pred eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccch
Q 007454 315 FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 394 (603)
Q Consensus 315 ~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~ 394 (603)
|+++++++..+.+.+. .++..++.. .... . . .+. + .|+++...+++++
T Consensus 254 -g~I~~~~~~~~~~~~g-~~~~~d~~~------~i~~--a--~-----~~~---~-~g~p~~~~iaal~----------- 301 (475)
T PLN03226 254 -GMIFFRKGPKPPKGQG-EGAVYDYED------KINF--A--V-----FPG---L-QGGPHNHTIAALA----------- 301 (475)
T ss_pred -eEEEEchhhcccccCC-CccHHHHHH------Hhcc--c--c-----CCc---c-CCCchHHHHHHHH-----------
Confidence 8889888765433321 111111100 0000 0 0 011 2 4668888888876
Q ss_pred hHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCC
Q 007454 395 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIR 474 (603)
Q Consensus 395 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~ 474 (603)
.|++++...|.+.+.+++..++++|.+.|.++ | ++|+++..
T Consensus 302 -----------------------------aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~------G---~~l~~~~t- 342 (475)
T PLN03226 302 -----------------------------VALKQAMTPEFKAYQKQVKANAAALANRLMSK------G---YKLVTGGT- 342 (475)
T ss_pred -----------------------------HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC------C---CEEEcCCC-
Confidence 69999988899999999999999999999874 3 56777542
Q ss_pred CCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCC
Q 007454 475 FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGI 554 (603)
Q Consensus 475 ~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 554 (603)
..+-.+|.|+..+ ++...+.+.+++.||.+.-+.. |+.. .....
T Consensus 343 ~~hi~lv~~~~~g-----i~~~~~~~~L~~~~I~~nk~~~--p~~~-----------------------------~~~~~ 386 (475)
T PLN03226 343 DNHLVLWDLRPLG-----LTGSRVEKVLDLAHITLNKNAV--PGDS-----------------------------SALVP 386 (475)
T ss_pred CCCEEEEEccCCC-----CCHHHHHHHHHHCCCEECCCCC--CCCc-----------------------------ccCCC
Confidence 2233334443333 4556688888899999865531 1100 00111
Q ss_pred CEEEEe----cCCCCCHHHHHHHHHHHHHHHhh
Q 007454 555 TVVTAS----LGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 555 g~VR~S----lg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+.||+. ...--+++|++++.++|.+.|+.
T Consensus 387 ~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 387 GGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred CCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 345553 44455789999999999999984
No 52
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.80 E-value=1.6e-17 Score=178.36 Aligned_cols=298 Identities=14% Similarity=0.118 Sum_probs=195.8
Q ss_pred ecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCCCCcEEE
Q 007454 113 DYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDYVY 192 (603)
Q Consensus 113 Dyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~~~e~vf 192 (603)
=+-|.+++|+.+++++.++.. |. + ...++++++++++++++|++ +.++
T Consensus 18 t~~g~s~~~~~v~~a~~~~~~-----------------------~~-----~--~~~~~~~~~~~~~a~~~g~~--~~~~ 65 (363)
T TIGR01437 18 TILGVSTVSDEVADAQKRGAQ-----------------------NY-----F--EIKELVNKTGEYIANLLGVE--DAVI 65 (363)
T ss_pred ecCCCCCCCHHHHHHHHHHHh-----------------------cC-----C--CHHHHHHHHHHHHHHhhCCC--eEEE
Confidence 556778899999999876421 00 0 14577899999999999975 4444
Q ss_pred eccC-chHHHHHH----------------------------------------HHHHcCCEEEEEeccCCccccCHHHHH
Q 007454 193 DYES-EAVEAMIR----------------------------------------TSEKRGARVMSAEFSWPRLRINSEKLR 231 (603)
Q Consensus 193 ~~es-~sV~~~~~----------------------------------------~a~~~Ga~V~~~~~~~~~g~i~~~~L~ 231 (603)
+... .++..++. .++..|+++++++++ +.++.++|+
T Consensus 66 ~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~---~~~d~~~le 142 (363)
T TIGR01437 66 VSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA---NECSAEQLE 142 (363)
T ss_pred EcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC---CCCCHHHHH
Confidence 4322 12222222 223456677777664 358999999
Q ss_pred HHHhhcCCCCCCeeEEE-EeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCC
Q 007454 232 KMVVSKGKKKKQRGLFV-FPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFG 309 (603)
Q Consensus 232 ~~l~~~~~~~~~t~Lv~-~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG 309 (603)
++|.+ +|++++ ++..+|.+|.++|++.| ++||++|++|++|++|...- . ....+++|++++|+||+++
T Consensus 143 ~ai~~------~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~---~-~~~~~g~D~~~~S~~K~l~ 212 (363)
T TIGR01437 143 AAITE------KTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL---Q-KYYRLGADLVIYSGAKAIE 212 (363)
T ss_pred HhcCh------hceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch---H-HHHHcCCCEEEEeCCcccC
Confidence 99974 466544 45557899999999865 58999999999999986321 1 1124578999999999776
Q ss_pred CCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCc
Q 007454 310 ENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGK 389 (603)
Q Consensus 310 ~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~ 389 (603)
+ |+ .|+|+.+++.++.+++...| .. +. ++.||.+ ++|+.
T Consensus 213 g-p~-~G~l~~~~~~i~~~~~~~~~-~~---------------------------~~--~~~~~~~---~~gl~------ 251 (363)
T TIGR01437 213 G-PT-SGLVLGKKKYIEWVKLQSKG-IG---------------------------RA--MKVGKEN---ILGLT------ 251 (363)
T ss_pred C-Cc-eEEEEEcHHHHHHHHhccCC-Cc---------------------------ce--eccCHHH---HHHHH------
Confidence 5 88 79988877766555432222 10 11 3455533 55555
Q ss_pred cccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEe
Q 007454 390 LEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIY 469 (603)
Q Consensus 390 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iy 469 (603)
+|++.+.+.|.+.+.++.+.+ +++.++|.+++ .++++
T Consensus 252 ----------------------------------aAl~~~~~~~~~~~~~~~~~~-~~l~~~L~~i~--------g~~~~ 288 (363)
T TIGR01437 252 ----------------------------------AALEQYLSTGKESGAEMVAKL-TPFIEALNTLK--------GVSAS 288 (363)
T ss_pred ----------------------------------HHHHHHHccCcccHHHHHHHH-HHHHHHHhcCC--------CeEEE
Confidence 688887777888888777764 47999998764 26666
Q ss_pred CCCCCCCC---CCEEEEEEccCCCCccCHHHHHHHHhcCC--cEEeeCcccCccCCchhhhhhHHHHHhhhccccccccc
Q 007454 470 GPKIRFDR---GPALAFNVFDWKREKIEPVLVQKLADREN--ISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDN 544 (603)
Q Consensus 470 gp~~~~~r---g~ivsFnv~~~~g~~v~~~~V~~Lad~~g--I~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 544 (603)
.+...... ...|+|+.... | +++..+.+.+.+.| |.+|.-
T Consensus 289 ~~~~~~~~~~~~~~v~~~~~~~-g--~~~~~l~~~L~~~~~~I~~r~~-------------------------------- 333 (363)
T TIGR01437 289 IVQDEAGRDIARAEIRFDESEL-G--MTAADVVQALRQGEPAIYTRGY-------------------------------- 333 (363)
T ss_pred EecCCCCCcCceEEEEEeccCC-C--CCHHHHHHHHhcCCCCEEEeee--------------------------------
Confidence 43211111 24577776421 1 45566666666555 666530
Q ss_pred ccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 007454 545 NRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 545 ~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l 581 (603)
....|.||+++.. +|++|+++|+++|++++
T Consensus 334 ------~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 334 ------KANEGIIEIDPRS-VTGGQLDIIVERIREIV 363 (363)
T ss_pred ------eecCCeEEEEeec-CCHHHHHHHHHHHHHhC
Confidence 1223689999986 55999999999998864
No 53
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.80 E-value=1.4e-17 Score=196.44 Aligned_cols=283 Identities=15% Similarity=0.083 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEec----------------------------cCch-HHHHHHHHHHcCCEEEEEecc
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDY----------------------------ESEA-VEAMIRTSEKRGARVMSAEFS 219 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~----------------------------es~s-V~~~~~~a~~~Ga~V~~~~~~ 219 (603)
-+.+.+.++.|++++|+++.+..+.. +|.+ +..+...++..|++|+.++.+
T Consensus 120 Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~ 199 (954)
T PRK05367 120 LEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAA 199 (954)
T ss_pred HHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCc
Confidence 46778899999999999988774322 2222 222334455667777776653
Q ss_pred CCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 007454 220 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPD 298 (603)
Q Consensus 220 ~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~D 298 (603)
. + ++ . .++ ..++.+..|.+|.+.|++.| ++||++|++++|||.+++.. ...+..++++|
T Consensus 200 ~-d--~~---------~-----~~~-~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~--~l~~pge~GaD 259 (954)
T PRK05367 200 K-A--LD---------H-----DDV-FGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALT--LLTPPGEMGAD 259 (954)
T ss_pred c-C--CC---------c-----ccE-EEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhcc--CCCChhhcCCC
Confidence 1 1 10 1 133 34566668999999999855 68999999999999664443 23467899999
Q ss_pred EEEEccccc-----CCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCC
Q 007454 299 FLICSFYQI-----FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAAT 373 (603)
Q Consensus 299 flv~S~hK~-----fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT 373 (603)
|++.++||| ||+ | |.|+|++|++....|.+...|-++. ...... +.. .+++.+ .+.+ +|.||
T Consensus 260 i~vgs~qkfg~P~g~GG-P-~aGflavr~~~~r~lpgrivG~s~d-~~g~~~-~~l------alqtRe-qhiR--rekaT 326 (954)
T PRK05367 260 IAVGSAQRFGVPMGFGG-P-HAAYFAVRDAYKRSMPGRIVGVSVD-AAGNPA-LRL------ALQTRE-QHIR--REKAT 326 (954)
T ss_pred EEEeeCcccCCCCCCCC-C-CEEEEEECHHHHhhCCCCeeeeecc-cCCCcc-ccc------cccccc-cccc--ccccc
Confidence 999999999 887 6 8999999999877787666651111 000000 000 011111 1233 68999
Q ss_pred CChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Q 007454 374 NTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALM 453 (603)
Q Consensus 374 ~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~ 453 (603)
.|+....++.. +. ....+.++...|+.+|.+|+..|+++|.++|.
T Consensus 327 sNict~qaL~a-------------~~----------------------a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~ 371 (954)
T PRK05367 327 SNICTAQVLLA-------------VM----------------------ASMYAVYHGPEGLKAIARRVHRLAAILAAGLR 371 (954)
T ss_pred cccchHHHHHH-------------HH----------------------HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99987655431 11 00123556677999999999999999999997
Q ss_pred cCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHh
Q 007454 454 KLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEK 533 (603)
Q Consensus 454 ~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~ 533 (603)
.. | +++..+ ....++.|.+.. ++..|.+.+.++||.++.
T Consensus 372 ~~------G---~~~~~~----~~f~~~~~~~~~------~~~~i~~~l~~~gi~~~~---------------------- 410 (954)
T PRK05367 372 AL------G---LEVVHD----SFFDTLTVEVGG------DAAAVLARALAAGINLRR---------------------- 410 (954)
T ss_pred hc------C---cccCCC----CCCCeEEEeCCC------CHHHHHHHHHHCCceecc----------------------
Confidence 63 3 344333 244688888631 334455555567887631
Q ss_pred hhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 007454 534 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 578 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~ 578 (603)
...+.||+|++.+||.+||++|++.+.
T Consensus 411 ------------------~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 411 ------------------VDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ------------------ccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 112479999999999999999999997
No 54
>PRK07179 hypothetical protein; Provisional
Probab=99.79 E-value=1e-17 Score=181.98 Aligned_cols=223 Identities=15% Similarity=0.129 Sum_probs=155.7
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCC-------CCCCCCCCCC
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKD-------MDSFGLSLVR 296 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~-------m~~ldls~~~ 296 (603)
.+.++|++.|.+ .++++|++...+|+||.++|++.| ++|+++|+++++|.+|..+.. +..+++. .+
T Consensus 168 ~d~~~l~~~l~~-----~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~ 241 (407)
T PRK07179 168 NDVDHLRRQIER-----HGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLT-SR 241 (407)
T ss_pred CCHHHHHHHHHh-----cCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCC-CC
Confidence 478999998864 147899999999999999999866 589999999999999976541 0123332 25
Q ss_pred CcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCCh
Q 007454 297 PDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTF 376 (603)
Q Consensus 297 ~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~ 376 (603)
+|+++.|+||.|| + ++|++++++++++.+..... +. .-.+|.+.
T Consensus 242 vdi~~~S~sK~~g--~-~~G~l~~~~~~~~~~~~~~~------------------------------~~---~~~~t~~~ 285 (407)
T PRK07179 242 VHFITASLAKAFA--G-RAGIITCPRELAEYVPFVSY------------------------------PA---IFSSTLLP 285 (407)
T ss_pred CCEEEeechHhhh--c-cCeEEEeCHHHHHHHHHhCc------------------------------Ce---eeCCCCCH
Confidence 7999999999999 4 48999988766443321000 00 12456555
Q ss_pred hhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCC
Q 007454 377 SGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQ 456 (603)
Q Consensus 377 ~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~ 456 (603)
..++++. ++++.+.. .+...++++.++++|.+.|.++.
T Consensus 286 ~~~aa~~----------------------------------------aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~g 323 (407)
T PRK07179 286 HEIAGLE----------------------------------------ATLEVIES--ADDRRARLHANARFLREGLSELG 323 (407)
T ss_pred HHHHHHH----------------------------------------HHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcC
Confidence 5555443 46666543 35567889999999999998762
Q ss_pred CCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhc
Q 007454 457 HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDR 536 (603)
Q Consensus 457 h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~ 536 (603)
+++++ .++++.+.+.+. .....+.+.+.++||.++ .+|.+..
T Consensus 324 ---------~~v~~------~~~i~~l~~~~~----~~~~~~~~~L~~~GI~~~--~~~~p~~----------------- 365 (407)
T PRK07179 324 ---------YNIRS------ESQIIALETGSE----RNTEVLRDALEERNVFGA--VFCAPAT----------------- 365 (407)
T ss_pred ---------CCCCC------CCCEEEEEeCCH----HHHHHHHHHHHHCCceEe--eecCCCC-----------------
Confidence 33443 357888886532 112345555667899854 4454421
Q ss_pred ccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 537 EAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
....+.||+|++.++|.|||++++++|++++++
T Consensus 366 --------------~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 366 --------------PKNRNLIRLSLNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred --------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 111368999999999999999999999998876
No 55
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=1.1e-16 Score=170.47 Aligned_cols=331 Identities=16% Similarity=0.117 Sum_probs=239.5
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCCCCcEEEe
Q 007454 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISENDYVYD 193 (603)
Q Consensus 114 yaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~~~e~vf~ 193 (603)
..|=++.++.|++++..-+..+ ....-..++.++++.+..+|+.+..+++..
T Consensus 10 ~PGP~~v~~~V~~am~~~~~~h----------------------------~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll 61 (383)
T COG0075 10 TPGPVPVPPRVLLAMARPMVGH----------------------------RSPDFVGIMKEVLEKLRKVFGTENGDVVLL 61 (383)
T ss_pred eCCCCCCCHHHHHHhcCCCCCC----------------------------CCHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 4566788999999986522110 011235788899999999999984344322
Q ss_pred ccC-----------------------ch--HHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEE
Q 007454 194 YES-----------------------EA--VEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFV 248 (603)
Q Consensus 194 ~es-----------------------~s--V~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~ 248 (603)
..+ +. =.++.+.+++.|++|..+...| .-.++++++++.|.. .++.++|+
T Consensus 62 ~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~w-g~~v~p~~v~~~L~~----~~~~~~V~ 136 (383)
T COG0075 62 SGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEW-GEAVDPEEVEEALDK----DPDIKAVA 136 (383)
T ss_pred cCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhc----CCCccEEE
Confidence 111 11 2346788999999999999998 667899999999984 24788999
Q ss_pred EeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCCcC
Q 007454 249 FPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPI 327 (603)
Q Consensus 249 ~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~ 327 (603)
+.|.---||+++|++.|+ +++++|.+++|||++++|- .++++.+|++|+++.+..|.++. |.|+|++.++++..+.
T Consensus 137 ~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg--~~~~vd~wgiDv~itgSQK~l~~-PPGla~v~~S~~a~e~ 213 (383)
T COG0075 137 VVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGG--EPLKVDEWGIDVAITGSQKALGA-PPGLAFVAVSERALEA 213 (383)
T ss_pred EEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCC--cccchhhcCccEEEecCchhccC-CCccceeEECHHHHHH
Confidence 999999999999999775 7899999999999888776 69999999999999999999988 7799999999988766
Q ss_pred cCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhh
Q 007454 328 LVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQ 407 (603)
Q Consensus 328 L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~ 407 (603)
++.....+ +......++.. ++. .+ .-.-|+++..+.+|.
T Consensus 214 ~~~~~~~~---~ylDL~~~~~~-------~~~-----~~--~~p~Tppv~~i~aL~------------------------ 252 (383)
T COG0075 214 IEERKHPS---FYLDLKKWLKY-------MEK-----KG--STPYTPPVNLIYALR------------------------ 252 (383)
T ss_pred HhcCCCCc---eeecHHHHHHH-------Hhh-----cC--CCCCCCCHHHHHHHH------------------------
Confidence 65321111 00000000000 010 00 125688888888876
Q ss_pred hhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEcc
Q 007454 408 QKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFD 487 (603)
Q Consensus 408 ~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~ 487 (603)
.+|+.+.+-|+++..+|-+.+.++++.+|..| | +++++. .......+.+|.++.
T Consensus 253 ----------------~al~~i~~EGle~r~~RH~~~~~a~r~~~~al------G---l~~~~~-~~~~s~tvta~~~P~ 306 (383)
T COG0075 253 ----------------EALDLILEEGLEARIARHRRLAEALRAGLEAL------G---LELFAD-PERRSPTVTAIKVPE 306 (383)
T ss_pred ----------------HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc------C---CccccC-cccCCCceEEEECCC
Confidence 69999999999999999999999999999987 3 566662 222334566666655
Q ss_pred CCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCH
Q 007454 488 WKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANF 567 (603)
Q Consensus 488 ~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~ 567 (603)
.- -+......+.+++||.+..|.- ....-..||+.-=+-+.
T Consensus 307 g~---~~~~~~~~~~~~~g~~i~gg~~------------------------------------~l~gkifRIGhMG~~~~ 347 (383)
T COG0075 307 GV---DDKKVRRALLKEYGVEIAGGQG------------------------------------PLKGKIFRIGHMGNVRP 347 (383)
T ss_pred CC---CcHHHHHHHHHhCCEEeccccc------------------------------------ccCccEEEEecCccCCH
Confidence 21 1233455678888999876611 12224789986558999
Q ss_pred HHHHHHHHHHHHHHhhhhh
Q 007454 568 EDVYRLWAFVAQFLDADFV 586 (603)
Q Consensus 568 eDVd~l~~~l~~~l~~~f~ 586 (603)
+||.+++.+|...|.+.-+
T Consensus 348 ~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 348 EDVLAALAALEAALRELGV 366 (383)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 9999999999998877433
No 56
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.79 E-value=1.4e-16 Score=171.11 Aligned_cols=157 Identities=13% Similarity=0.119 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEec---------------------cCchHHHHHHHHHHcCCEEEEEeccC-CccccCH
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDY---------------------ESEAVEAMIRTSEKRGARVMSAEFSW-PRLRINS 227 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~---------------------es~sV~~~~~~a~~~Ga~V~~~~~~~-~~g~i~~ 227 (603)
..+++.++.||+|+|+++..+ +.- .......+...++..|+++..++.+. +++.++.
T Consensus 51 ~~~~~~~e~lA~~~g~~~~~i-~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~ 129 (370)
T TIGR02539 51 PPIHDFLEDLAEFLGMDEARV-THGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDP 129 (370)
T ss_pred hHHHHHHHHHHHHhCCCceEE-ECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCH
Confidence 467788999999999975444 210 00111222345677899999998642 2467899
Q ss_pred HHHHHHHhhcCC-CCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccc
Q 007454 228 EKLRKMVVSKGK-KKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFY 305 (603)
Q Consensus 228 ~~L~~~l~~~~~-~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~h 305 (603)
++|++.|...+. ...++++|++.+.+|+||.+.|++.| .+|+++|+++++|+++..+. .++++..+++|+++.|+|
T Consensus 130 ~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~--~~~~~~~~~~di~v~s~s 207 (370)
T TIGR02539 130 EGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGR--MPVSAKEIGADFIVGSGH 207 (370)
T ss_pred HHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCC--cCCCHHHcCCCEEEeeCc
Confidence 999999863111 11257899999999999999999866 58999999999999999886 577776778999999999
Q ss_pred ccCCCCCCceEEEEEeCCCCcCcCC
Q 007454 306 QIFGENPSGFGCLFVKKSTVPILVD 330 (603)
Q Consensus 306 K~fG~~P~G~G~L~vkk~~~~~L~p 330 (603)
|+||. +.++|+++++++.++.|..
T Consensus 208 K~~~~-~g~~G~l~~~~~~i~~l~~ 231 (370)
T TIGR02539 208 KSMAA-SGPCGVLGMSEEWEDIVLR 231 (370)
T ss_pred ccccC-CCCEEEEEECHHHHhhhcc
Confidence 99984 5568999999988776654
No 57
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.79 E-value=3.7e-17 Score=182.46 Aligned_cols=206 Identities=15% Similarity=0.128 Sum_probs=147.0
Q ss_pred ccCchHHHHHHHHHHcCC---EEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCc--cccccccccHHHHH-H
Q 007454 194 YESEAVEAMIRTSEKRGA---RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLH--SRMTGARYPYLWMR-I 267 (603)
Q Consensus 194 ~es~sV~~~~~~a~~~Ga---~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~--Sn~TG~~~pl~~i~-~ 267 (603)
.+|.|+ .+.++..|. +|+.+|++ .+++++.++|+++|...++ .++++|++.+. +++||.+.|++.|+ +
T Consensus 217 ~~H~S~---~kaa~~lglg~~~v~~vp~d-~~g~~d~~~L~~~i~~~~~--~g~~~~~vvataGtt~tGaiDpl~eIa~i 290 (522)
T TIGR03799 217 RGHYSL---GKAADVLGIGRDNLIAIKTD-ANNRIDVDALRDKCAELAE--QNIKPLAIVGVAGTTETGNIDPLDEMADI 290 (522)
T ss_pred CchHHH---HHHHHHcCCCcccEEEEEeC-CCCcCCHHHHHHHHHHHHH--CCCCcEEEEEEecCcCCCCcCCHHHHHHH
Confidence 345554 455666676 79999998 5899999999999974221 24667777655 66999999999775 8
Q ss_pred HHhCCcEEEEeccccCCCCCCCCC-----CCCC-CCcEEEEcccccCCCCCCceEEEEEeCCC-CcCcCC--CCCC--Cc
Q 007454 268 AQENDWHILIDACALGPKDMDSFG-----LSLV-RPDFLICSFYQIFGENPSGFGCLFVKKST-VPILVD--NTSS--GM 336 (603)
Q Consensus 268 a~e~g~~vlvDAaq~~~~~m~~ld-----ls~~-~~Dflv~S~hK~fG~~P~G~G~L~vkk~~-~~~L~p--~~~g--G~ 336 (603)
|+++|+++|||||+.+++ ...+ +..+ ++|++++|+|||++. |.|+|+||+|+.. .+.+.+ .|.. |.
T Consensus 291 ~~~~g~~lHVDaA~gg~~--~~~~~~r~~l~gle~aDSit~d~HK~l~~-P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~ 367 (522)
T TIGR03799 291 AQELGCHFHVDAAWGGAT--LLSNTYRHLLKGIERADSVTIDAHKQLYV-PMGAGMVLFKDPALMSAIEHHAEYILRKGS 367 (522)
T ss_pred HHHcCCeEEEEchhhhHH--HhCHHHHHHhcCchhCCEEEEChhhcCCc-CcccEEEEEeCHHHHHHhccCcchhcCCCC
Confidence 999999999999999886 3333 4443 799999999997665 9999999999743 233332 1210 11
Q ss_pred eeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCC
Q 007454 337 VSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGG 416 (603)
Q Consensus 337 v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 416 (603)
. ++. +.. +|.|. ++.. +.+-
T Consensus 368 ~------------------d~~-----~~~--legsR-~~~a-l~lw--------------------------------- 387 (522)
T TIGR03799 368 K------------------DLG-----SHT--LEGSR-PGMA-MLVY--------------------------------- 387 (522)
T ss_pred C------------------ccc-----cce--eecCc-chHH-HHHH---------------------------------
Confidence 0 000 011 45343 4332 2232
Q ss_pred CCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEcc
Q 007454 417 GGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFD 487 (603)
Q Consensus 417 ~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~ 487 (603)
.+++++...|++.+.++...|+++|.+.|.+. |.+++++|. ..++|+|.+..
T Consensus 388 -------~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~--------~~~el~~~p----~l~iv~Fr~~p 439 (522)
T TIGR03799 388 -------AGLHIIGRKGYELLIDQSIEKAKYFADLIQQQ--------PDFELVTEP----ELCLLTYRYVP 439 (522)
T ss_pred -------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC--------CCeEEecCC----CccEEEEEEeC
Confidence 68888888899999999999999999999875 338999864 45799999743
No 58
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.78 E-value=4e-17 Score=179.55 Aligned_cols=301 Identities=12% Similarity=0.095 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEec--------------------------cCchHHHHH-HHHHHcCCEEEEEeccCC
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDY--------------------------ESEAVEAMI-RTSEKRGARVMSAEFSWP 221 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~--------------------------es~sV~~~~-~~a~~~Ga~V~~~~~~~~ 221 (603)
.+.+.+.++.+++++|+++++++++. ++.+..... ..++..|++++.+++++
T Consensus 111 ~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~- 189 (447)
T PRK00451 111 LQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED- 189 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC-
Confidence 45666777889999999888775432 222222222 23445799999999884
Q ss_pred ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEE--eccccCCCCCCCCCCCCCCCc
Q 007454 222 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILI--DACALGPKDMDSFGLSLVRPD 298 (603)
Q Consensus 222 ~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlv--DAaq~~~~~m~~ldls~~~~D 298 (603)
+ .++.++|++.|.+ +|+++++++. |.||.+.|++.| ++||++|+++++ |+... +. .. ...++++|
T Consensus 190 ~-~~d~~~l~~~i~~------~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~~-g~--~~-~~~~~~~D 257 (447)
T PRK00451 190 G-VTDLEALEAAVDD------DTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVSL-GL--LK-PPGEYGAD 257 (447)
T ss_pred C-CCCHHHHHHhcCC------CeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHHh-cc--CC-CcccCCCC
Confidence 5 8999999998863 6899999987 889999999966 589999999988 76543 32 12 12568999
Q ss_pred EEEEccccc-----CCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCC
Q 007454 299 FLICSFYQI-----FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAAT 373 (603)
Q Consensus 299 flv~S~hK~-----fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT 373 (603)
++++|+||| +|+ | |+|+++++++..+.+.+...|.+........ +... +... ....+ ++.+|
T Consensus 258 ~~~~s~~k~~~~~~~~G-p-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~------~~~~-~~~~~--~~~~~ 324 (447)
T PRK00451 258 IVVGEGQPLGIPLSFGG-P-YLGFFATRKKLVRQMPGRLVGETVDADGKRG--FVLT------LQAR-EQHIR--REKAT 324 (447)
T ss_pred EEEECCCcCCCCCCCCC-C-CchHHHhhHHHHhhCCCCEeeeecccCCCee--eEee------cccc-ccccc--ccccc
Confidence 999999997 665 6 8999999999888777666653321111000 0000 0000 00112 46678
Q ss_pred CChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Q 007454 374 NTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALM 453 (603)
Q Consensus 374 ~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~ 453 (603)
.++.+..++. ++. ...+++++...|++++.++...++++|+++|.
T Consensus 325 ~~~~~~~~~~-------------~~a----------------------aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~ 369 (447)
T PRK00451 325 SNICTNQALN-------------ALA----------------------AAIYMSLLGPEGLRELAEQNHQKAHYLAERLA 369 (447)
T ss_pred ccccccHHHH-------------HHH----------------------HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7776543321 000 00245555556899999999999999999998
Q ss_pred cCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHh
Q 007454 454 KLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEK 533 (603)
Q Consensus 454 ~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~ 533 (603)
++. .++++.. .....+.+.+. .+...+.+.+.++||.++.- ..+ .
T Consensus 370 ~~~--------g~~~~~~----~~~~~~~v~~~------~~~~~~~~~L~~~gi~~~~~--~~~-----~---------- 414 (447)
T PRK00451 370 EIG--------GVELFDG----PFFNEFVVRLP------KPAEEVNEALLEKGILGGYD--LGR-----Y---------- 414 (447)
T ss_pred hcC--------CEEecCC----CeEEEEEEecC------CCHHHHHHHHHhcCCCCCcc--ccc-----c----------
Confidence 763 2555521 11122333331 12233444344567763210 000 0
Q ss_pred hhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 007454 534 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l 581 (603)
. ... .+.+|+|+++++|.+||++|++.|++++
T Consensus 415 ----------~-----~~~-~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 415 ----------Y-----PEL-GNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ----------c-----CCc-CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 0 011 2589999999999999999999998764
No 59
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.77 E-value=4.6e-17 Score=171.99 Aligned_cols=276 Identities=16% Similarity=0.132 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEeccCchHHHHH---------------------HHHHHcCCEEEEEeccCCccccCH
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDYESEAVEAMI---------------------RTSEKRGARVMSAEFSWPRLRINS 227 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~~---------------------~~a~~~Ga~V~~~~~~~~~g~i~~ 227 (603)
....+++|+.+++++|++ +.+++.....++...+ ..++..|+++..++ .++.
T Consensus 45 ~~~~~~l~~~la~~~~~~-~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~------~~~~ 117 (349)
T cd06454 45 SDLHEELEEELAEFHGKE-AALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFK------HNDM 117 (349)
T ss_pred chHHHHHHHHHHHHhCCC-CEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEec------CCCH
Confidence 466789999999999985 4555432222222111 22334455554432 2467
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCC------CCCCCCCCCCCcEE
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKD------MDSFGLSLVRPDFL 300 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~------m~~ldls~~~~Dfl 300 (603)
++++++|.... ...++++|++++.+|.||.+.|++.| ++|+++|+++++|+++..+.- +..++....++|++
T Consensus 118 ~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~ 196 (349)
T cd06454 118 EDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDII 196 (349)
T ss_pred HHHHHHHHHhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEE
Confidence 88888887421 11357899999999999999999854 689999999999999875531 00134445688999
Q ss_pred EEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhh
Q 007454 301 ICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPM 380 (603)
Q Consensus 301 v~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~ 380 (603)
+.|+||+|| +.| |.++.+++.++.+.+.. . .. ...++.+...++
T Consensus 197 ~~s~sK~~~--~~g-G~i~~~~~~~~~~~~~~------------~-------------------~~--~~~~~~~~~~~~ 240 (349)
T cd06454 197 MGTLGKAFG--AVG-GYIAGSKELIDYLRSYA------------R-------------------GF--IFSTSLPPAVAA 240 (349)
T ss_pred Eeechhhhc--ccC-CEEECCHHHHHHHHHhc------------h-------------------hh--hccCCCCHHHHH
Confidence 999999999 556 77776766543332110 0 00 113455555554
Q ss_pred hhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 007454 381 SIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNT 460 (603)
Q Consensus 381 gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~ 460 (603)
++. ++++++.. ++.+.++.+.+.+++.+.|.++
T Consensus 241 a~~----------------------------------------~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~----- 273 (349)
T cd06454 241 AAL----------------------------------------AALEVLQG--GPERRERLQENVRYLRRGLKEL----- 273 (349)
T ss_pred HHH----------------------------------------HHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-----
Confidence 443 57776655 4677889999999999999875
Q ss_pred CCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccc
Q 007454 461 EGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKS 540 (603)
Q Consensus 461 ~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~ 540 (603)
| +.++++. .+.++.+.+++. .....+.+.+.++||.++.+....
T Consensus 274 -g---~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~L~~~gI~~~~~~~~~------------------------ 317 (349)
T cd06454 274 -G---FPVGGSP----SHIIPPLIGDDP----AKAVAFSDALLERGIYVQAIRYPT------------------------ 317 (349)
T ss_pred -C---CcccCCC----CCcEEEEeCCCh----HHHHHHHHHHHhCCceEEEecCCc------------------------
Confidence 2 3344542 234555544321 123334444445599998541100
Q ss_pred ccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 007454 541 KSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 580 (603)
Q Consensus 541 ~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~ 580 (603)
.....+.||++++.++|.+||+++++.|+++
T Consensus 318 ---------~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 318 ---------VPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ---------cCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 0011268999999999999999999999764
No 60
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.76 E-value=1.8e-16 Score=171.47 Aligned_cols=325 Identities=13% Similarity=0.076 Sum_probs=203.5
Q ss_pred cCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHH-HHHHHHHHcCCCCCcEEE
Q 007454 114 YFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESA-MKKRIMDFLNISENDYVY 192 (603)
Q Consensus 114 yaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~-aR~~Ia~~lna~~~e~vf 192 (603)
.++-+++++.|++++..++... |..+++++.+..|......+++ +|+.+++++|++..++++
T Consensus 25 ~~~~~~~~~~v~~a~~~~~~~~-----------------~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~ 87 (402)
T cd00378 25 IASENFTSPAVMEAMGSDLTNK-----------------YAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQP 87 (402)
T ss_pred eccCCcCCHHHHHHhccccccc-----------------ccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeec
Confidence 4677788999999987654210 1236776666545554444454 889999999998766654
Q ss_pred eccCchHHHHHHH--------------------------HHHcCCEEEEEeccCC--ccccCHHHHHHHHhhcCCCCCCe
Q 007454 193 DYESEAVEAMIRT--------------------------SEKRGARVMSAEFSWP--RLRINSEKLRKMVVSKGKKKKQR 244 (603)
Q Consensus 193 ~~es~sV~~~~~~--------------------------a~~~Ga~V~~~~~~~~--~g~i~~~~L~~~l~~~~~~~~~t 244 (603)
..-++++..++.. ++..|.++..+++++. ++.++.++|++.+.. .++
T Consensus 88 ~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~-----~~~ 162 (402)
T cd00378 88 HSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE-----FKP 162 (402)
T ss_pred CCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh-----CCC
Confidence 3223333332222 2334555555555433 578899999999863 257
Q ss_pred eEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCC---CCCCCCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 007454 245 GLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKD---MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFV 320 (603)
Q Consensus 245 ~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~---m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~v 320 (603)
+++++... .+|...|++.| ++|+++|++|++|++|+.+.. ..+.++. ++|+++.|+||+|++ |.| |+++.
T Consensus 163 ~~v~~~~~--~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l~G-~~g-g~i~~ 236 (402)
T cd00378 163 KLIVAGAS--AYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTLRG-PRG-GLILT 236 (402)
T ss_pred CEEEecCc--ccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCCCC-CCc-eEEEe
Confidence 77776554 46888899866 589999999999999865430 0133344 689999999998854 766 44455
Q ss_pred eC-CCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHh
Q 007454 321 KK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVR 399 (603)
Q Consensus 321 kk-~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~ 399 (603)
++ +..+.+...... ...+++.+..+.+++
T Consensus 237 ~~~~~~~~l~~~~~~----------------------------------~~~~~~~~~~~~a~~---------------- 266 (402)
T cd00378 237 RKGELAKKINSAVFP----------------------------------GLQGGPHLHVIAAKA---------------- 266 (402)
T ss_pred ccHHHHHHHHHHhCc----------------------------------cccCCchHHHHHHHH----------------
Confidence 54 554433211000 012344444444433
Q ss_pred hhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCC
Q 007454 400 RAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGP 479 (603)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ 479 (603)
.++......++....++.+.+++++.+.|.++ | +.++.+ ...++
T Consensus 267 ------------------------~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~~---~~~~~ 310 (402)
T cd00378 267 ------------------------VALKEALEPEFKAYAKQVVENAKALAEALKER------G---FKVVSG---GTDNH 310 (402)
T ss_pred ------------------------HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC------C---CeEeec---CCCCe
Confidence 34443332245677778889999999999875 2 344421 12467
Q ss_pred EEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEE
Q 007454 480 ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTA 559 (603)
Q Consensus 480 ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~ 559 (603)
.+.+.+.+. + .....+.+++.++||.++.+.. +.... +..+...+|+
T Consensus 311 ~v~v~~~~~-~--~~~~~~~~~l~~~gI~v~~~~~--p~~~~----------------------------~~~~~~~lRi 357 (402)
T cd00378 311 LVLVDLRPK-G--ITGKAAEDALEEAGITVNKNTL--PWDPS----------------------------SPFVPSGIRI 357 (402)
T ss_pred EEEEeCCcc-C--CCHHHHHHHHHHcCcEEcCCcC--CCCCC----------------------------CCCCCCeeEe
Confidence 777777632 1 2334566777889999975422 11000 0112358999
Q ss_pred ecCCCC----CHHHHHHHHHHHHHHHhhhh
Q 007454 560 SLGYLA----NFEDVYRLWAFVAQFLDADF 585 (603)
Q Consensus 560 Slg~~t----t~eDVd~l~~~l~~~l~~~f 585 (603)
+++.++ +.+||+++++.|+++++...
T Consensus 358 ~~~~~~~~~~~~~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 358 GTPAMTTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred cCHHHHHhCCCHHHHHHHHHHHHHHHhccc
Confidence 999987 69999999999999877654
No 61
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.76 E-value=2.3e-16 Score=171.80 Aligned_cols=327 Identities=11% Similarity=0.076 Sum_probs=199.9
Q ss_pred ceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHH-HHHHHHHHcCCCC
Q 007454 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESA-MKKRIMDFLNISE 187 (603)
Q Consensus 109 ~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~-aR~~Ia~~lna~~ 187 (603)
.+.|+ ++-+++++.|++++..++... |..+++.+.+..|....+.+++ +|+.+++++|++.
T Consensus 27 ~~~l~-~~~n~~~~~v~~a~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~ 88 (416)
T PRK00011 27 HIELI-ASENFVSPAVMEAQGSVLTNK-----------------YAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEY 88 (416)
T ss_pred Ceeee-cccCcCCHHHHHHHhchhhcc-----------------cccCCCCccccccchHHHHHHHHHHHHHHHHhCCCc
Confidence 45555 455668999999986653210 1225666655555555555555 8999999999987
Q ss_pred CcEEEeccCchHHHHHHHH--------------------------HHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCC
Q 007454 188 NDYVYDYESEAVEAMIRTS--------------------------EKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKK 241 (603)
Q Consensus 188 ~e~vf~~es~sV~~~~~~a--------------------------~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~ 241 (603)
.++++...+.++..++... ...|+++..+++++.++.++.++|+++|..
T Consensus 89 ~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~----- 163 (416)
T PRK00011 89 ANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALE----- 163 (416)
T ss_pred eeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHh-----
Confidence 7676543222322222221 123455556665533567899999999863
Q ss_pred CCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCC---CCCCCCCCCCCcEEEEcccccCCCCCCceEE
Q 007454 242 KQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKD---MDSFGLSLVRPDFLICSFYQIFGENPSGFGC 317 (603)
Q Consensus 242 ~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~---m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~ 317 (603)
.+++++.+.. +++|...|++.| ++|+++|+++++|++|+.|.. ..+.++. ++|++++|+||++++ |.| |+
T Consensus 164 ~~~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l~g-~~g-g~ 237 (416)
T PRK00011 164 HKPKLIIAGA--SAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTLRG-PRG-GL 237 (416)
T ss_pred cCCCEEEECC--CcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCCCC-CCc-eE
Confidence 2477777753 457888899866 589999999999999876541 0134454 689999999998854 665 55
Q ss_pred EEEe-CCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhH
Q 007454 318 LFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEIS 396 (603)
Q Consensus 318 L~vk-k~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~ 396 (603)
++.+ ++..+.++.....| -.+++....++++.
T Consensus 238 i~~~~~~~~~~l~~~~~~~----------------------------------~~~~~~~~~~aa~~------------- 270 (416)
T PRK00011 238 ILTNDEELAKKINSAVFPG----------------------------------IQGGPLMHVIAAKA------------- 270 (416)
T ss_pred EEeCCHHHHHHHHHHhCcc----------------------------------ccCCccHHHHHHHH-------------
Confidence 5554 34443333111000 11233333333332
Q ss_pred HHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCC
Q 007454 397 EVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD 476 (603)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~ 476 (603)
.++..+..-+++...++.+.+++++.+.|.++ | ++++. . ..
T Consensus 271 ---------------------------~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~------g---~~~~~-~--~~ 311 (416)
T PRK00011 271 ---------------------------VAFKEALEPEFKEYAQQVVKNAKALAEALAER------G---FRVVS-G--GT 311 (416)
T ss_pred ---------------------------HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC------C---Ceeee-c--CC
Confidence 23332223367888889999999999999875 3 34442 1 12
Q ss_pred CCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCE
Q 007454 477 RGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITV 556 (603)
Q Consensus 477 rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (603)
..+++.+.+.+. + +....+.+++.++||.++.+..-- ...+ ... ...
T Consensus 312 ~~~~~~i~~~~~-~--~~~~~~~~~L~~~GI~v~~~~~p~--~~~~---------------------------~~~-~~~ 358 (416)
T PRK00011 312 DNHLVLVDLRSK-G--LTGKEAEAALEEANITVNKNAVPF--DPRS---------------------------PFV-TSG 358 (416)
T ss_pred CCeEEEEeCccc-C--CCHHHHHHHHHHcCcEEccCcCCC--CCCC---------------------------CCC-CCc
Confidence 357888887532 1 233456666678899998553210 0000 011 135
Q ss_pred EEEecCCC----CCHHHHHHHHHHHHHHHhh
Q 007454 557 VTASLGYL----ANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 557 VR~Slg~~----tt~eDVd~l~~~l~~~l~~ 583 (603)
+|++.... .|.+||++++++|++++..
T Consensus 359 ~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 359 IRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred eEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 88866443 4699999999999998664
No 62
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.75 E-value=5e-16 Score=170.36 Aligned_cols=321 Identities=11% Similarity=0.049 Sum_probs=207.2
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccch-HHHHHHHHHHHHHHHcCCCCCcEEEe
Q 007454 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQ-ESGLESAMKKRIMDFLNISENDYVYD 193 (603)
Q Consensus 115 aa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~-~~~~~~~aR~~Ia~~lna~~~e~vf~ 193 (603)
++-...|+.+++++...+++- |.-+.|......|.. ..+++.-+.+++.++||+.-.++=-.
T Consensus 56 asEN~~s~~v~~a~~s~l~nk-----------------yaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~ 118 (493)
T PRK13580 56 ASENYSSLAVQLAMGNLLTDK-----------------YAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPH 118 (493)
T ss_pred cccccCCHHHHHHhccccccc-----------------CcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCC
Confidence 677788999999977654421 122444444433333 46788889999999999876554111
Q ss_pred ccCchHHHHHHH-----------------------------HHHc--CCEEEEE--------------------------
Q 007454 194 YESEAVEAMIRT-----------------------------SEKR--GARVMSA-------------------------- 216 (603)
Q Consensus 194 ~es~sV~~~~~~-----------------------------a~~~--Ga~V~~~-------------------------- 216 (603)
.-+++-..+... .++. |.+|+.+
T Consensus 119 Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y 198 (493)
T PRK13580 119 SGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSY 198 (493)
T ss_pred CcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEec
Confidence 111111111111 1111 4455444
Q ss_pred eccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCC--
Q 007454 217 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLS-- 293 (603)
Q Consensus 217 ~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls-- 293 (603)
+++..++.+|.+++++.+.. .+.++++.++||..+ ..|++.| ++|+++|++++||++|.+|. ...++-
T Consensus 199 ~vd~~~g~iD~d~l~~~~~~------~~plvii~g~S~~~~-~~dl~~i~eia~~~gA~L~VD~AH~~Gl--igg~~~~~ 269 (493)
T PRK13580 199 GVDPDTGLLDYDEIAALARE------FKPLILVAGYSAYPR-RVNFAKLREIADEVGAVLMVDMAHFAGL--VAGKVFTG 269 (493)
T ss_pred ccCcccCccCHHHHHHHHhh------cCCEEEEeCccccCC-CcCHHHHHHHHHHcCCEEEEECchhhce--eccccchh
Confidence 33434678999999999974 578999999999955 8899866 58999999999999999998 455541
Q ss_pred ----CCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCccccccc
Q 007454 294 ----LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEK 369 (603)
Q Consensus 294 ----~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 369 (603)
..++||+++|+||+|++ |.| |++++++++.+.|... . | +
T Consensus 270 ~~~~~~~~D~vtgT~hKaL~G-P~G-G~I~~~~~l~~~L~~a-~------------------------------P----~ 312 (493)
T PRK13580 270 DEDPVPHADIVTTTTHKTLRG-PRG-GLVLAKKEYADAVDKG-C------------------------------P----L 312 (493)
T ss_pred hcCCCCCCcEEEeCChhhccC-CCe-EEEEecHHHHHHHhhC-C------------------------------C----c
Confidence 23799999999998733 887 9999998765544210 0 0 1
Q ss_pred ccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 007454 370 VAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLV 449 (603)
Q Consensus 370 e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~ 449 (603)
..|++..+.+++.+ .++..+.+-+.....+++...+++|.
T Consensus 313 i~gg~l~p~iAA~a----------------------------------------vAl~e~~~~ef~~y~~~l~~Na~~La 352 (493)
T PRK13580 313 VLGGPLPHVMAAKA----------------------------------------VALAEARTPEFQKYAQQVVDNARALA 352 (493)
T ss_pred ccCCCccHHHHHHH----------------------------------------HHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 13344444454443 34554443344567888999999999
Q ss_pred HHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHH
Q 007454 450 NALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDN 529 (603)
Q Consensus 450 ~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~ 529 (603)
+.|.++ |.+++ +. ....+||.+.+.+.+ +....+++.+.+.||.+..- .++..
T Consensus 353 ~~L~~~------G~~vv---~g---gTdshIV~V~lg~~~---~~g~~a~~~L~e~GI~vn~i---~~Ptv--------- 405 (493)
T PRK13580 353 EGFLKR------GARLV---TG---GTDNHLVLIDVTSFG---LTGRQAESALLDAGIVTNRN---SIPSD--------- 405 (493)
T ss_pred HHHHhc------CCCcc---CC---CCCCCEEEEEeCCHH---HHHHHHHHHHHHCCeEEccc---cCCCC---------
Confidence 999875 43332 21 124689999986632 22335666777889987421 11110
Q ss_pred HHHhhhcccccccccccccCCCCCCCEEEEecCCCCC----HHHHHHHHHHHHHHHhh
Q 007454 530 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLAN----FEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt----~eDVd~l~~~l~~~l~~ 583 (603)
.. +......||+++..+|+ ++||++++++|.+.++.
T Consensus 406 -------------p~-----g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 406 -------------PN-----GAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred -------------CC-----CCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 00 11123579999999775 99999999999998864
No 63
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=2.7e-17 Score=178.14 Aligned_cols=149 Identities=13% Similarity=0.112 Sum_probs=104.7
Q ss_pred ccchHHHHHHHHHHHHHHHcCCCCCcEEEeccCch------------------------HHHHHHHHHHcCCEEEEEecc
Q 007454 164 HGGQESGLESAMKKRIMDFLNISENDYVYDYESEA------------------------VEAMIRTSEKRGARVMSAEFS 219 (603)
Q Consensus 164 ~g~~~~~~~~~aR~~Ia~~lna~~~e~vf~~es~s------------------------V~~~~~~a~~~Ga~V~~~~~~ 219 (603)
|++......++.++++++++|+. ..+++..-..+ ...+...+++.|+++..++..
T Consensus 48 y~r~~~p~~~~le~~lA~l~g~~-~~v~~~sG~~ai~~~l~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 126 (390)
T PRK08064 48 YSRSGNPTREALEDIIAELEGGT-KGFAFASGMAAISTAFLLLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT 126 (390)
T ss_pred ccCCCChhHHHHHHHHHHHhCCC-CeEEECCHHHHHHHHHHHhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC
Confidence 33334455678899999999986 45655321111 112223445667777776642
Q ss_pred CCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCc
Q 007454 220 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPD 298 (603)
Q Consensus 220 ~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~D 298 (603)
+.+++++.|.+ +|++|.+...+|.||.+.|++.| ++|+++|+.|++|+++..+....++ .+++|
T Consensus 127 ------d~~~l~~~l~~------~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~---~~g~D 191 (390)
T PRK08064 127 ------NLEEVAQNIKP------NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL---DLGAD 191 (390)
T ss_pred ------CHHHHHHhcCC------CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch---hhCCc
Confidence 56778877753 68999999999999999999855 5899999999999998877521233 46899
Q ss_pred EEEEcccccCCCCCCc--eEEEEEeC-CCCcCcC
Q 007454 299 FLICSFYQIFGENPSG--FGCLFVKK-STVPILV 329 (603)
Q Consensus 299 flv~S~hK~fG~~P~G--~G~L~vkk-~~~~~L~ 329 (603)
+++.|+||+|++ |.| .|++++++ +..+.++
T Consensus 192 ivv~S~tK~~~G-~~~~laG~~v~~~~~~~~~l~ 224 (390)
T PRK08064 192 VVLHSATKFLAG-HSDVLAGLAVVKDEELAQKLY 224 (390)
T ss_pred EEEeecceeccC-CccceeEEEEeCCHHHHHHHH
Confidence 999999999886 777 47777764 3333343
No 64
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.75 E-value=1.7e-16 Score=168.08 Aligned_cols=305 Identities=11% Similarity=-0.022 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEecc-C----------------------chHHHHHHHHHHcCCEEEEEeccCCccccC
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDYE-S----------------------EAVEAMIRTSEKRGARVMSAEFSWPRLRIN 226 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~e-s----------------------~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~ 226 (603)
...++.++.|++++|. ++.++... + .........++..|+++..+++++.++.++
T Consensus 18 ~~~~~~~~~la~~~~~--~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 95 (352)
T cd00616 18 PKVREFEKAFAEYLGV--KYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNID 95 (352)
T ss_pred HHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcC
Confidence 3456788889999986 24444211 0 111222334566799999999874467889
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCC--CCCCCCcEEEEc
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFG--LSLVRPDFLICS 303 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ld--ls~~~~Dflv~S 303 (603)
.++|++.+.. +++++.+. |.+|...|++.| ++|+++|+++++|++|..|. ...+ +.. ..|+.++|
T Consensus 96 ~~~l~~~i~~------~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~--~~~~~~~~~-~~d~~~~S 163 (352)
T cd00616 96 PELIEAAITP------RTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGA--TYKGRKVGT-FGDAGAFS 163 (352)
T ss_pred HHHHHHhcCc------CCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCC--eECCEEccc-CcceeEEc
Confidence 9999998853 57888775 479999999855 58999999999999999886 2222 111 26999999
Q ss_pred cc--ccCCCCCCceEEEEEeC-CCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhh
Q 007454 304 FY--QIFGENPSGFGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPM 380 (603)
Q Consensus 304 ~h--K~fG~~P~G~G~L~vkk-~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~ 380 (603)
+| |+++. |. .|+++.++ ++.+.+++...+|..... .. ++.. ... +..++.++..
T Consensus 164 ~~~~K~~~~-~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~----~~----------~~~~--~~~---~~~~~~~~~a-- 220 (352)
T cd00616 164 FHPTKNLTT-GE-GGAVVTNDEELAERARLLRNHGRDRDR----FK----------YEHE--ILG---YNYRLSEIQA-- 220 (352)
T ss_pred CCCCCCCcc-cC-ceEEEECCHHHHHHHHHHHHcCCCCCC----Cc----------cccc--eee---eccCcCHHHH--
Confidence 87 99974 33 35566654 454444432222221000 00 0000 000 1112222222
Q ss_pred hhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 007454 381 SIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNT 460 (603)
Q Consensus 381 gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~ 460 (603)
++......+++.+.++.+.+.+++.+.|.+++
T Consensus 221 --------------------------------------------a~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~---- 252 (352)
T cd00616 221 --------------------------------------------AIGLAQLEKLDEIIARRREIAERYKELLADLP---- 252 (352)
T ss_pred --------------------------------------------HHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCC----
Confidence 22222223567888889999999999998753
Q ss_pred CCCceEEEeCCCCC-CCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccc
Q 007454 461 EGNALVKIYGPKIR-FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAK 539 (603)
Q Consensus 461 ~g~plv~Iygp~~~-~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~ 539 (603)
.++++++... ....++++|.+.+..+ +++..+.+.+.++||.+ +.+|.+...+... .... . +..
T Consensus 253 ----g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~L~~~gI~~--~~~~~~~~~~~~~----~~~~-~--~~~ 317 (352)
T cd00616 253 ----GIRLPDVPPGVKHSYHLYVIRLDPEAG--ESRDELIEALKEAGIET--RVHYPPLHHQPPY----KKLL-G--YPP 317 (352)
T ss_pred ----CccCCCCCCCCceeeEEEEEEECCcCC--CCHHHHHHHHHHCCCCe--eeecCccccCHhh----hhcc-C--CCc
Confidence 3777776421 2356899999975312 35566666667789955 5677665443210 0000 0 000
Q ss_pred cccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 007454 540 SKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 578 (603)
Q Consensus 540 ~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~ 578 (603)
....+. .....+.||+|+++++|.+||++++++|+
T Consensus 318 ~~~~~a----~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 318 GDLPNA----EDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CCChHH----HHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 000000 01223699999999999999999998873
No 65
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.75 E-value=6.3e-17 Score=187.23 Aligned_cols=270 Identities=11% Similarity=0.041 Sum_probs=183.7
Q ss_pred HHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCC
Q 007454 206 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGP 284 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~ 284 (603)
+...|.+|+.++++ ++|.+|.++|+++|... ++++..|.+++.++..+...|++.| ++||++|+.|++|++|..+
T Consensus 608 a~~~GieVv~Vp~D-~~G~iDle~L~a~I~~~---~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a 683 (954)
T PRK12566 608 AQMAGMRVVIVECD-PDGNVDLDDLKAKAAAA---GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNA 683 (954)
T ss_pred HHHCCCEEEEeccC-CCCCcCHHHHHHHhhcc---CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhh
Confidence 55679999999998 68999999999999731 2357777777777777777889855 5899999999999999987
Q ss_pred CCCCCCC-CCCCCCcEEEEcccccCCCCCCceEEEEEeC-CCCcCcCCCCCC-CceeccccccccccccccCCCCCCccc
Q 007454 285 KDMDSFG-LSLVRPDFLICSFYQIFGENPSGFGCLFVKK-STVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQ 361 (603)
Q Consensus 285 ~~m~~ld-ls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk-~~~~~L~p~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~ 361 (603)
. ..++ ..++++||++++.|||||. |.|.|.+++.. .+.+.|.|...+ +.+.. .+
T Consensus 684 ~--~~l~~Pg~~GADi~~~s~HKtf~~-P~G~GGP~vG~iav~~~L~pfLp~~P~~d~---~G----------------- 740 (954)
T PRK12566 684 Q--VGLARPADIGADVSHMNLHKTFCI-PHGGGGPGMGPIGVRAHLAPFVANHPVVPV---EG----------------- 740 (954)
T ss_pred c--cCCCChhhcCCCEEEecCCcccCc-CccCCCCccchhhhhhhhhhhccCCCCcCC---CC-----------------
Confidence 6 5666 4789999999999999997 99999999998 776667765443 21110 00
Q ss_pred CcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHH
Q 007454 362 TSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRG 441 (603)
Q Consensus 362 ~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~ 441 (603)
.+. +.|+.+....-+. -+.-+++.++..+|.+..+.+.
T Consensus 741 --~~~---r~ga~S~~~~gsa-------------------------------------~~l~~A~~Yi~~lG~eLk~aa~ 778 (954)
T PRK12566 741 --PDP---NNGAVSAAPWGSA-------------------------------------SILPISWMYIAMMGPQLADASE 778 (954)
T ss_pred --CCC---CCCceeecccchH-------------------------------------HHHHHHHHHHHHHCHHHHHHHH
Confidence 000 1233322211110 0011688888889988555555
Q ss_pred --HHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCC--CCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCc
Q 007454 442 --RCLINWLVNALMKLQHPNTEGNALVKIYGPKIR--FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHI 517 (603)
Q Consensus 442 --~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~--~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~ 517 (603)
..+++|+.++|.+.. + +. |.+... .....+..+.+++..| ++...|++-+-++||...+- .
T Consensus 779 ~ailnAnYla~rL~~~~-------~-v~-~~~~~~~~~hEfii~~~~l~~~~g--~~~~dvakRL~d~Gihapt~----~ 843 (954)
T PRK12566 779 VAILSANYLANQLGGAF-------P-VL-YRGRNERVAHECILDLRPLKAQTG--ISEEDVAKRLMDYGFHAPTM----S 843 (954)
T ss_pred HHHHHHHHHHHHhHhhC-------C-CC-cCCCCCCeeeEEEEEccccccccC--CCHHHHHHHHHHCCcEEeEE----e
Confidence 668999999997631 1 22 232210 0123333334443323 34444555444889986541 0
Q ss_pred cCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh-hhhcccccc
Q 007454 518 WFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA-DFVEKARWR 592 (603)
Q Consensus 518 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~-~f~~~~~~~ 592 (603)
+ . . .+.+|++...+++.+|+|+|+++|..++++ +-|+.++|-
T Consensus 844 f-------------------------------P-v-~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~v~~g~~~ 886 (954)
T PRK12566 844 F-------------------------------P-V-PGTLMVEPTESESKAELDRFVEAMLSIRAEIGKVQEGNWP 886 (954)
T ss_pred e-------------------------------c-c-CCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 0 0 1 368999999999999999999999999988 667777763
No 66
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.73 E-value=9.5e-15 Score=172.54 Aligned_cols=268 Identities=13% Similarity=0.087 Sum_probs=171.2
Q ss_pred HHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccC
Q 007454 205 TSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALG 283 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~ 283 (603)
.+...|.+|+.++++ .+|.+|.++|+++|... +.++..|.++.-+...+...|++.| ++||++|++|+||+++.+
T Consensus 606 sa~~~G~~vv~v~~d-~~G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~ 681 (954)
T PRK05367 606 SAVMAGMKVVVVACD-ENGNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMN 681 (954)
T ss_pred HHHHCCCEEEEECCC-CCCCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChh
Confidence 455679999999988 57999999999999742 1245555666655553345799855 589999999999999986
Q ss_pred CCCCCCCC-CCCCCCcEEEEcccccCCCCCC-----ceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCC
Q 007454 284 PKDMDSFG-LSLVRPDFLICSFYQIFGENPS-----GFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCET 357 (603)
Q Consensus 284 ~~~m~~ld-ls~~~~Dflv~S~hK~fG~~P~-----G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~ 357 (603)
+. ..+. ..++++|++++|.|||||. |. |+|+|++|+.. .|...|..+.. . . +
T Consensus 682 al--~~l~~pg~~GADi~~~s~HK~f~~-P~G~GGPg~G~l~vr~~l----~p~lpg~~v~~--~-~-----~------- 739 (954)
T PRK05367 682 AQ--VGLARPGDIGADVSHLNLHKTFCI-PHGGGGPGVGPIGVKAHL----APFLPGHPVQI--A-G-----G------- 739 (954)
T ss_pred hc--cCCCChhhcCCCEEEecCcccCCC-CcCCCCCceEEEeecccc----cccCCCCccCc--C-C-----C-------
Confidence 64 2332 2368999999999999753 44 57799999644 44444422110 0 0 0
Q ss_pred CcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHH
Q 007454 358 EPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMI 437 (603)
Q Consensus 358 e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i 437 (603)
+ . ..|+...+. ++.+ ..+. .+.-++..+|.+.+
T Consensus 740 ~------~----~~g~v~ta~-~g~a------------l~~~------------------------~a~~yi~~~G~~Gl 772 (954)
T PRK05367 740 E------T----GIGAVSAAP-FGSA------------SILP------------------------ISWMYIRMMGAEGL 772 (954)
T ss_pred C------C----CcCcchhHH-HHHH------------HHHH------------------------HHHHHHHHHCHHHH
Confidence 0 0 013333111 1111 0011 46667777786666
Q ss_pred HHHHH---HHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEE-EccCCCCccCHHHHHHHHhcCCcEEeeCc
Q 007454 438 SRRGR---CLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFN-VFDWKREKIEPVLVQKLADRENISLSYGS 513 (603)
Q Consensus 438 ~~r~~---~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFn-v~~~~g~~v~~~~V~~Lad~~gI~lr~G~ 513 (603)
.+..+ .+++|+.++|.+.. + +...||....-+..++.+. ++...| +....|.+-+.++||...+-+
T Consensus 773 r~~a~~~~~~A~Yl~~~L~~~~-------~-~~~~~~~~~~~~e~i~~~~~~~~~~g--~~~~di~krL~d~G~~~~t~~ 842 (954)
T PRK05367 773 RQATEVAILNANYIAKRLKDHY-------P-VLYTGANGRVAHECILDLRPLKESTG--ITVDDIAKRLIDYGFHAPTMS 842 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-------C-ccccCCCCCcccceEEEeecccccCC--CCHHHHHHHHHHCCCeEeecC
Confidence 66555 89999999997631 1 3334443222334555552 332222 334556666678899876521
Q ss_pred ccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh-hhhcccccc
Q 007454 514 LHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA-DFVEKARWR 592 (603)
Q Consensus 514 ~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~-~f~~~~~~~ 592 (603)
+ .. .+.+++++.-++|.+|+|+|++++..+.++ .-|+.++|-
T Consensus 843 ~------------------------------------pv-~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~~~~~~~~ 885 (954)
T PRK05367 843 F------------------------------------PV-AGTLMVEPTESESKAELDRFCDAMIAIRAEIDEVEAGEWP 885 (954)
T ss_pred C------------------------------------cc-CCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 0 01 368999999999999999999999999887 556666653
No 67
>PLN02880 tyrosine decarboxylase
Probab=99.73 E-value=1.2e-15 Score=169.57 Aligned_cols=274 Identities=14% Similarity=0.112 Sum_probs=173.8
Q ss_pred HHHHHHHHHHcCC---EEEEEeccC-CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCc
Q 007454 199 VEAMIRTSEKRGA---RVMSAEFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDW 273 (603)
Q Consensus 199 V~~~~~~a~~~Ga---~V~~~~~~~-~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~ 273 (603)
+..+.+++.-.|. .|+.+|.+. .+++++.++|++.|...++....+-+|+-++-+-.||.+-|++.|+ +|+++|+
T Consensus 191 H~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~i 270 (490)
T PLN02880 191 HSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGM 270 (490)
T ss_pred hHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCC
Confidence 3344455555565 377788762 3578999999999975433334567888999999999999999775 8999999
Q ss_pred EEEEeccccCCCCCCCC-----CCCC-CCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccc
Q 007454 274 HILIDACALGPKDMDSF-----GLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLW 347 (603)
Q Consensus 274 ~vlvDAaq~~~~~m~~l-----dls~-~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~ 347 (603)
++|||||..++- ... .+.. .++|++++++|||++. |.|.|+||+|+... .+++..... .|.
T Consensus 271 wlHVDaA~gg~~--~~~~~~~~~l~gie~aDSit~d~HKwl~~-P~~~g~llvr~~~~-l~~~~~~~~---------~Yl 337 (490)
T PLN02880 271 WFHVDAAYAGSA--CICPEYRHYIDGVEEADSFNMNAHKWFLT-NFDCSLLWVKDRNA-LIQSLSTNP---------EFL 337 (490)
T ss_pred EEEEehhhHHHH--HhCHHHHHHhcCchhcCEEEECchhhcCC-CccEEEEEEeCHHH-HHHHHccCH---------HHh
Confidence 999999876653 111 2343 4799999999999887 99999999996321 112111110 000
Q ss_pred cccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHH
Q 007454 348 LTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLD 427 (603)
Q Consensus 348 ~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald 427 (603)
..+ .. ...++.++... ++.. .++ + +|+.
T Consensus 338 -~~~------------~~---~~~~~~~~~~~-~i~~------------------------------~rr-~----~alk 365 (490)
T PLN02880 338 -KNK------------AS---QANSVVDYKDW-QIPL------------------------------GRR-F----RSLK 365 (490)
T ss_pred -cCc------------cc---cccCCCChhcc-CcCC------------------------------CCc-c----cHHH
Confidence 000 00 01122222210 0000 000 0 3455
Q ss_pred H---HHhcCHHHHHHHHH---HHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCC-----CccCHH
Q 007454 428 Q---VDSLGLTMISRRGR---CLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKR-----EKIEPV 496 (603)
Q Consensus 428 ~---~~~iGl~~i~~r~~---~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g-----~~v~~~ 496 (603)
+ ++.+|.+.+.++++ .|++++.+.|.+.+ .++++.|. ..++|+|.++.... ..+...
T Consensus 366 lw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~--------~~el~~~~----~~~iv~Fr~~~~~~~~~~~~~~n~~ 433 (490)
T PLN02880 366 LWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDS--------RFEVVTPR----IFSLVCFRLVPPKNNEDNGNKLNHD 433 (490)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCC--------CEEEecCC----ceEEEEEEEeCCCCChhhHHHHHHH
Confidence 4 45579999999998 99999999998642 37888864 36799999975321 111223
Q ss_pred HHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCC-HHHHHHHHH
Q 007454 497 LVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLAN-FEDVYRLWA 575 (603)
Q Consensus 497 ~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt-~eDVd~l~~ 575 (603)
+.++|.+...|.++... -.+..++|+|++.++| .+||+++++
T Consensus 434 l~~~l~~~g~~~v~~t~-------------------------------------~~g~~~lR~~~~n~~tt~~di~~~~~ 476 (490)
T PLN02880 434 LLDAVNSSGKIFISHTV-------------------------------------LSGKYVLRFAVGAPLTEERHVTAAWK 476 (490)
T ss_pred HHHHHHhCCCEEEEEEE-------------------------------------ECCEEEEEEEecCCCCCHHHHHHHHH
Confidence 44444444455544210 0123589999987777 599999999
Q ss_pred HHHHHHhhhhh
Q 007454 576 FVAQFLDADFV 586 (603)
Q Consensus 576 ~l~~~l~~~f~ 586 (603)
.|.+..++-+.
T Consensus 477 ~i~~~~~~~~~ 487 (490)
T PLN02880 477 VLQDEASKLLG 487 (490)
T ss_pred HHHHHHHHHHH
Confidence 99988766543
No 68
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.72 E-value=1.6e-15 Score=160.53 Aligned_cols=320 Identities=14% Similarity=0.146 Sum_probs=193.3
Q ss_pred CCceeeecCCCCC----CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHH
Q 007454 107 SNHTCLDYFGIGL----FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDF 182 (603)
Q Consensus 107 ~~~vYLDyaa~tl----~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~ 182 (603)
+++-|+|.++..+ .++.+++++.+++... .. +...+...+| .....++.|++|+++
T Consensus 14 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~--------~~----------~~~~~~~~~g--~~~~~~~l~~~la~~ 73 (360)
T TIGR00858 14 DGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQY--------GA----------GSTASRLVSG--NSPLHEELEEELAEW 73 (360)
T ss_pred CCceEEecccCCcccCCCCHHHHHHHHHHHHhc--------CC----------CCCCcCcccC--CcHHHHHHHHHHHHH
Confidence 4556788777643 4478888877654321 00 1111111111 124567899999999
Q ss_pred cCCCCCcEEEeccCchHHHHHHHHHHcCCEEEEEeccCC---------------ccccCHHHHHHHHhhcCCCCCCeeEE
Q 007454 183 LNISENDYVYDYESEAVEAMIRTSEKRGARVMSAEFSWP---------------RLRINSEKLRKMVVSKGKKKKQRGLF 247 (603)
Q Consensus 183 lna~~~e~vf~~es~sV~~~~~~a~~~Ga~V~~~~~~~~---------------~g~i~~~~L~~~l~~~~~~~~~t~Lv 247 (603)
++. ++.+++...+.++..++..+.+.|.+|...+..++ -..++.++|++.+.... ..+++++
T Consensus 74 ~~~-~~~i~~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~--~~~~~~v 150 (360)
T TIGR00858 74 KGT-EAALLFSSGYLANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNR--GERRKLI 150 (360)
T ss_pred hCC-CCEEEECchHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcc--cCCCeEE
Confidence 985 45666655444433333333345555554322110 01247888998886421 1257899
Q ss_pred EEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCC-CCC------CCCCCCCCcEEEEcccccCCCCCCceEEEE
Q 007454 248 VFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKD-MDS------FGLSLVRPDFLICSFYQIFGENPSGFGCLF 319 (603)
Q Consensus 248 ~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~-m~~------ldls~~~~Dflv~S~hK~fG~~P~G~G~L~ 319 (603)
+++..+|.||.+.|++.| ++|+++|+++++|.++..+.- ... .++...+.|+++.|++|+|| |.| |.++
T Consensus 151 ~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~--~~g-G~~~ 227 (360)
T TIGR00858 151 VTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALG--SYG-AYVA 227 (360)
T ss_pred EEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhh--ccC-cEEE
Confidence 999999999999999966 589999999999999865430 000 12333467999999999999 667 8877
Q ss_pred EeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHh
Q 007454 320 VKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVR 399 (603)
Q Consensus 320 vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~ 399 (603)
.+++.++.+.+.. ..+ . +..+ .+...++++.
T Consensus 228 ~~~~~~~~~~~~~------------~~~------------------~--~~~~-~~~~~~~a~~---------------- 258 (360)
T TIGR00858 228 GSQALIDYLINRA------------RTL------------------I--FSTA-LPPAVAAAAL---------------- 258 (360)
T ss_pred cCHHHHHHHHHhC------------ccc------------------e--ecCC-CCHHHHHHHH----------------
Confidence 7766543332100 000 0 1112 2222332221
Q ss_pred hhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCC
Q 007454 400 RAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGP 479 (603)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ 479 (603)
+++++... ++...++.+.+.++|.+.|.++. ++++. ..++
T Consensus 259 ------------------------~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~---------~~~~~-----~~~~ 298 (360)
T TIGR00858 259 ------------------------AALELIQE--EPWRREKLLALIARLRAGLEALG---------FTLMP-----SCTP 298 (360)
T ss_pred ------------------------HHHHHHhh--CHHHHHHHHHHHHHHHHHHHHcC---------CccCC-----CCCC
Confidence 46665543 35677899999999999998752 23332 2467
Q ss_pred EEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEE
Q 007454 480 ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTA 559 (603)
Q Consensus 480 ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~ 559 (603)
++.+.+.+. .+...+.+.+.++||.++.+..... ..+.+.||+
T Consensus 299 ~~~~~~~~~----~~~~~~~~~l~~~gI~v~~~~~~~~---------------------------------~~~~~~iRi 341 (360)
T TIGR00858 299 IVPVIIGDN----ASALALAEELQQQGIFVGAIRPPTV---------------------------------PAGTSRLRL 341 (360)
T ss_pred EEEEEeCCH----HHHHHHHHHHHHCCeeEeeeCCCCC---------------------------------CCCCceEEE
Confidence 888887531 1122344444567999986422100 011248999
Q ss_pred ecCCCCCHHHHHHHHHHHH
Q 007454 560 SLGYLANFEDVYRLWAFVA 578 (603)
Q Consensus 560 Slg~~tt~eDVd~l~~~l~ 578 (603)
|+++++|.+|++++++.|+
T Consensus 342 s~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 342 TLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred EEcCCCCHHHHHHHHHhhC
Confidence 9999999999999998763
No 69
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.70 E-value=3.9e-15 Score=159.42 Aligned_cols=322 Identities=16% Similarity=0.188 Sum_probs=192.7
Q ss_pred CCceeeecCCC---CC-CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHH
Q 007454 107 SNHTCLDYFGI---GL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDF 182 (603)
Q Consensus 107 ~~~vYLDyaa~---tl-~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~ 182 (603)
.++-|+|.++. ++ .++.+++++.+.+... ..+++.+....| .....++.++.++++
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~------------------~~~~~~~~~~~g--~~~~~~~l~~~la~~ 96 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRY------------------GAGSGGSRLVTG--NSPAHEALEEELAEW 96 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhc------------------CCCCCCcCcccC--CcHHHHHHHHHHHHH
Confidence 45778888866 33 4678888877643211 001111111111 134567899999999
Q ss_pred cCCCCCcEEEeccCchHHHHHHHHHHcCCEEEEEeccCC---------c------cccCHHHHHHHHhhcCCCCCCeeEE
Q 007454 183 LNISENDYVYDYESEAVEAMIRTSEKRGARVMSAEFSWP---------R------LRINSEKLRKMVVSKGKKKKQRGLF 247 (603)
Q Consensus 183 lna~~~e~vf~~es~sV~~~~~~a~~~Ga~V~~~~~~~~---------~------g~i~~~~L~~~l~~~~~~~~~t~Lv 247 (603)
++. ++.+++...+++...++....+.|.+|...++..+ . ...+.+++++.+... ++.+.++
T Consensus 97 ~~~-~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~---~~~~~lv 172 (385)
T PRK05958 97 FGA-ERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLAKW---RAGRALI 172 (385)
T ss_pred hCC-CcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhc---cCCCeEE
Confidence 994 55566554333332222333344555544322110 0 013678899888642 1247888
Q ss_pred EEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCC------CCC-CCCCCCCCcEEEEcccccCCCCCCceEEEE
Q 007454 248 VFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKD------MDS-FGLSLVRPDFLICSFYQIFGENPSGFGCLF 319 (603)
Q Consensus 248 ~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~------m~~-ldls~~~~Dflv~S~hK~fG~~P~G~G~L~ 319 (603)
++....|.||.+.|++.| ++|+++|+++++|.+|..+.- +.. .++.....++++.|++|+|| +.| |.++
T Consensus 173 i~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~--~~G-g~~~ 249 (385)
T PRK05958 173 VTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALG--SSG-AAVL 249 (385)
T ss_pred EEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcc--cCC-cEEE
Confidence 898899999999999866 589999999999999865420 000 13333344588999999999 667 7776
Q ss_pred EeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHh
Q 007454 320 VKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVR 399 (603)
Q Consensus 320 vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~ 399 (603)
.+++..+.+.... .. + . + .+..+...++++.
T Consensus 250 ~~~~~~~~~~~~~-----------~~-~------------------~--~-~~~~~~~~~aa~~---------------- 280 (385)
T PRK05958 250 GSETLIDYLINRA-----------RP-F------------------I--F-TTALPPAQAAAAR---------------- 280 (385)
T ss_pred cCHHHHHHHHHhC-----------cc-c------------------e--e-cCCCCHHHHHHHH----------------
Confidence 6655433221100 00 0 0 1 1112223322221
Q ss_pred hhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCC
Q 007454 400 RAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGP 479 (603)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ 479 (603)
++++.+... +.+.++.+.+.+++.+.|.++ | ++++. ..++
T Consensus 281 ------------------------aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~------~---~~~~~-----~~~~ 320 (385)
T PRK05958 281 ------------------------AALRILRRE--PERRERLAALIARLRAGLRAL------G---FQLMD-----SQSA 320 (385)
T ss_pred ------------------------HHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc------C---CCcCC-----CCCC
Confidence 467665543 567788999999999999875 2 23332 2467
Q ss_pred EEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEE
Q 007454 480 ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTA 559 (603)
Q Consensus 480 ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~ 559 (603)
++.|.+++. ....++.++| .++||.++.+.... ...+..+||+
T Consensus 321 ~~~~~~~~~---~~~~~~~~~l-~~~gI~v~~~~~~~---------------------------------~~~~~~~lRi 363 (385)
T PRK05958 321 IQPLIVGDN---ERALALAAAL-QEQGFWVGAIRPPT---------------------------------VPAGTSRLRI 363 (385)
T ss_pred EEEEEeCCH---HHHHHHHHHH-HHCCceEecccCCC---------------------------------CCCCCceEEE
Confidence 888888641 1122345555 45799997531100 0011258999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHH
Q 007454 560 SLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 560 Slg~~tt~eDVd~l~~~l~~~l 581 (603)
|++.++|.+|++++++.|+++|
T Consensus 364 s~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 364 TLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred EecCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999998764
No 70
>PLN02483 serine palmitoyltransferase
Probab=99.67 E-value=2.5e-14 Score=159.31 Aligned_cols=285 Identities=12% Similarity=0.181 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEecc---------------------CchHHHHHHHHHHcCCEEEEEeccCCccccCH
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDYE---------------------SEAVEAMIRTSEKRGARVMSAEFSWPRLRINS 227 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~e---------------------s~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~ 227 (603)
....++.+++||+++|. ++.++|... ......++..++..|++++.++.+ +.
T Consensus 145 ~~~~~ele~~lA~~~g~-~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~------d~ 217 (489)
T PLN02483 145 TKLHRELEELVARFVGK-PAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN------TP 217 (489)
T ss_pred cHHHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC------CH
Confidence 35677899999999995 567766421 112333445566778888877643 45
Q ss_pred HHHHHHHhhcC----CC--CC-CeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCC-------CCCCCC
Q 007454 228 EKLRKMVVSKG----KK--KK-QRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKD-------MDSFGL 292 (603)
Q Consensus 228 ~~L~~~l~~~~----~~--~~-~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~-------m~~ldl 292 (603)
++|++.|.... .+ .+ ++.++++-.+.|++|.+.+++.+ ++|+++|+++++|.++..+.. ..-+++
T Consensus 218 ~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v 297 (489)
T PLN02483 218 SHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGV 297 (489)
T ss_pred HHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCC
Confidence 67776665210 00 11 23478888899999999999855 689999999999999865420 001344
Q ss_pred CCCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccC
Q 007454 293 SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 372 (603)
Q Consensus 293 s~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~G 372 (603)
...++|+++.|++|.|| +.| |.++.++++++.|.....+ . .-.+
T Consensus 298 ~~~~~dI~~~SfSKs~g--~~G-G~i~~~~~li~~l~~~~~~-~--------------------------------~~~~ 341 (489)
T PLN02483 298 DPADVDIMMGTFTKSFG--SCG-GYIAGSKELIQYLKRTCPA-H--------------------------------LYAT 341 (489)
T ss_pred CcccCcEEEEecchhcc--cCc-eEEEcCHHHHHHHHHhCcc-c--------------------------------cccC
Confidence 33468999999999999 667 8888777776555421100 0 0112
Q ss_pred CCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhc-C---HHHHHHHHHHHHHHH
Q 007454 373 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-G---LTMISRRGRCLINWL 448 (603)
Q Consensus 373 T~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-G---l~~i~~r~~~L~~~L 448 (603)
+.+.+.+.+.. ++++.+... | .....++++..+++|
T Consensus 342 ~~~p~~~~~~~----------------------------------------aaL~~l~~~~g~~~~~~~~~~l~~~~~~l 381 (489)
T PLN02483 342 SMSPPAVQQVI----------------------------------------SAIKVILGEDGTNRGAQKLAQIRENSNFF 381 (489)
T ss_pred CcCHHHHHHHH----------------------------------------HHHHHHHhCccccchHHHHHHHHHHHHHH
Confidence 22222222211 456654321 1 122345678888999
Q ss_pred HHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhH
Q 007454 449 VNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKD 528 (603)
Q Consensus 449 ~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~ 528 (603)
.+.|.++ | +.++++. .++++.+-+.+.. . ......+|+ ++||.+....++..
T Consensus 382 ~~~L~~~------G---~~v~~~~----~sp~~~l~l~~~~--~-~~~~~~~Ll-~~GI~v~~~~fp~~----------- 433 (489)
T PLN02483 382 RSELQKM------G---FEVLGDN----DSPVMPIMLYNPA--K-IPAFSRECL-KQNVAVVVVGFPAT----------- 433 (489)
T ss_pred HHHHHHC------C---CcccCCC----CCCEEEEEECCHH--H-HHHHHHHHH-HCCcEEeeeCCCCC-----------
Confidence 9999875 2 4566652 3567777665421 1 123455555 46999874222211
Q ss_pred HHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhhhh
Q 007454 529 NVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADFV 586 (603)
Q Consensus 529 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~f~ 586 (603)
....+.+|++++..+|.|||+++++.|+++++...+
T Consensus 434 ----------------------p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~ 469 (489)
T PLN02483 434 ----------------------PLLLARARICISASHSREDLIKALEVISEVGDLVGI 469 (489)
T ss_pred ----------------------CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 011258999999999999999999999999876444
No 71
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.65 E-value=4.4e-14 Score=151.99 Aligned_cols=285 Identities=12% Similarity=0.102 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEeccCchHHHHHHHHHHcCCEEEEEeccCCc---------------cccCHHHHHHHH
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDYESEAVEAMIRTSEKRGARVMSAEFSWPR---------------LRINSEKLRKMV 234 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~~~~a~~~Ga~V~~~~~~~~~---------------g~i~~~~L~~~l 234 (603)
++.++.++.+++++|++ ++++++..+++...+.....+.|.+|..-...++. ...+.++|++.+
T Consensus 87 ~l~~~l~~~la~~~g~~-~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i 165 (397)
T PRK06939 87 DLHKELEEKLAKFLGTE-DAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQL 165 (397)
T ss_pred HHHHHHHHHHHHHhCCC-cEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCCCCHHHHHHHH
Confidence 56778999999999975 67777655444443333333445554443221110 014778888888
Q ss_pred hhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCC-------CCCCCCCCCcEEEEcccc
Q 007454 235 VSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMD-------SFGLSLVRPDFLICSFYQ 306 (603)
Q Consensus 235 ~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~-------~ldls~~~~Dflv~S~hK 306 (603)
......+.++++++..++.|.+|...|++.+ .+|+++|+++++|.++..+..-. ..++. .++|+++.|++|
T Consensus 166 ~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK 244 (397)
T PRK06939 166 KEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGK 244 (397)
T ss_pred HhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHH
Confidence 6311112368899998899999999999855 58999999999999985432000 01222 257999999999
Q ss_pred cCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhh
Q 007454 307 IFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQ 386 (603)
Q Consensus 307 ~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~ 386 (603)
+|++ +. .|.++.+++.++.+..... . + .-.++.+...++++.
T Consensus 245 ~~~g-~r-~G~v~~~~~~~~~l~~~~~-----------~-~---------------------~~~~~~~~~~~~a~~--- 286 (397)
T PRK06939 245 ALGG-AS-GGYTAGRKEVIDWLRQRSR-----------P-Y---------------------LFSNSLAPAIVAASI--- 286 (397)
T ss_pred HhCc-cC-ceEEEeCHHHHHHHHHhCc-----------c-c---------------------cccCCCCHHHHHHHH---
Confidence 9963 54 5888888776654432100 0 0 012222222222211
Q ss_pred cCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceE
Q 007454 387 SGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV 466 (603)
Q Consensus 387 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv 466 (603)
++++.+.. .+.+.++.+.+.+++.+.|.++. +
T Consensus 287 -------------------------------------~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~---------~ 318 (397)
T PRK06939 287 -------------------------------------KVLELLEE--SDELRDRLWENARYFREGMTAAG---------F 318 (397)
T ss_pred -------------------------------------HHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcC---------C
Confidence 45666543 35677888899999999998752 2
Q ss_pred EEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccccccccc
Q 007454 467 KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNR 546 (603)
Q Consensus 467 ~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 546 (603)
.++.+ .++++.+.+.+. .-..+++++|+++ ||.++.+.+..
T Consensus 319 ~~~~~-----~~~~~~~~~~~~---~~~~~~~~~L~~~-gI~v~~~~~~~------------------------------ 359 (397)
T PRK06939 319 TLGPG-----EHPIIPVMLGDA---KLAQEFADRLLEE-GVYVIGFSFPV------------------------------ 359 (397)
T ss_pred CcCCC-----CCCEEEEEECCH---HHHHHHHHHHHHC-CceEeeeCCCC------------------------------
Confidence 22222 345665555431 1122345566654 99988432210
Q ss_pred ccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhh
Q 007454 547 KDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 547 ~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
...+.+.||++++++++.+||+++++.|++++.+.
T Consensus 360 ---~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 360 ---VPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred ---CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 00112589999999999999999999999987664
No 72
>PLN02271 serine hydroxymethyltransferase
Probab=99.64 E-value=8.8e-14 Score=153.63 Aligned_cols=340 Identities=14% Similarity=0.086 Sum_probs=209.0
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccch-HHHHHHHHHHHHHHHcCCCCCcE---
Q 007454 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQ-ESGLESAMKKRIMDFLNISENDY--- 190 (603)
Q Consensus 115 aa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~-~~~~~~~aR~~Ia~~lna~~~e~--- 190 (603)
|+-...|+.|++++-..+++- |.-+.|...+.-|.. ..+++.-+.+++.++||++..++
T Consensus 155 ASEN~~S~av~~algS~ltnk-----------------YaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaN 217 (586)
T PLN02271 155 ASENFVCRAVMEALGSHLTNK-----------------YSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVN 217 (586)
T ss_pred cccccCCHHHHHHhcCccccc-----------------CCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccc
Confidence 666788999999977655421 122445444433333 36788889999999999987544
Q ss_pred EEe-------------------------ccCchHHHHH------HHHHHcCCEEEEEe--ccCCccccCHHHHHHHHhhc
Q 007454 191 VYD-------------------------YESEAVEAMI------RTSEKRGARVMSAE--FSWPRLRINSEKLRKMVVSK 237 (603)
Q Consensus 191 vf~-------------------------~es~sV~~~~------~~a~~~Ga~V~~~~--~~~~~g~i~~~~L~~~l~~~ 237 (603)
|-. -++..+..-. ..+...|..+..++ ++..++.||.++|++.+..
T Consensus 218 VQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~- 296 (586)
T PLN02271 218 VQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD- 296 (586)
T ss_pred eeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh-
Confidence 111 1111111100 11122354445554 5556789999999996543
Q ss_pred CCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCCCCCCCCC---CCCCcEEEEcccccCCCCCC
Q 007454 238 GKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKDMDSFGLS---LVRPDFLICSFYQIFGENPS 313 (603)
Q Consensus 238 ~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~m~~ldls---~~~~Dflv~S~hK~fG~~P~ 313 (603)
.+++|+++.+.++. ...|++.++ +|+++|+++++|++|.+|. +..++- ..++|+++++.|||+.+ |.
T Consensus 297 ----~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGL--Ia~g~~~sP~~~aDvvt~TTHKtLrG-Pr 367 (586)
T PLN02271 297 ----FRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGL--VAAKECVNPFDYCDIVTSTTHKSLRG-PR 367 (586)
T ss_pred ----cCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccc--cccCcCCCCCcCCcEEEeCCcccCCC-CC
Confidence 37999999888877 778899775 8999999999999999997 555532 23699999999999865 99
Q ss_pred ceEEEEEeCCCCcCcCCCCCC-CceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCcccc
Q 007454 314 GFGCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQ 392 (603)
Q Consensus 314 G~G~L~vkk~~~~~L~p~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~ 392 (603)
| |++++|++....+++...+ |.-...+. +. . .+.. .--|. +++|+.|.. |+|++
T Consensus 368 G-G~I~~r~~~~~~~~g~~gs~s~~~~~~d---~~--~-----kI~~-aVfPg---lqgGphn~~-IAalA--------- 422 (586)
T PLN02271 368 G-GIIFYRKGPKLRKQGMLLSHGDDNSHYD---FE--E-----KINF-AVFPS---LQGGPHNNH-IAALA--------- 422 (586)
T ss_pred c-eEEEecccccccccCCccccccccccHH---HH--H-----Hhhc-ccCCc---cccChhHHH-HHHHH---------
Confidence 9 8888888765433332222 11000000 00 0 0000 00122 578888777 88877
Q ss_pred chhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCC
Q 007454 393 GEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPK 472 (603)
Q Consensus 393 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~ 472 (603)
.|++.+..-....-.+++..-++.|-+.|.+. |.++|. |-
T Consensus 423 -------------------------------valkea~~~efk~Ya~QVv~NAkaLA~~L~~~------G~~vv~--gg- 462 (586)
T PLN02271 423 -------------------------------IALKQVATPEYKAYMQQVKKNAQALASALLRR------KCRLVT--GG- 462 (586)
T ss_pred -------------------------------HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC------CCeEee--CC-
Confidence 46665544344445555555566666677653 444432 32
Q ss_pred CCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCC
Q 007454 473 IRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANL 552 (603)
Q Consensus 473 ~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 552 (603)
.....|-..+... | ++-..+++++++.||.+---. .+. +. ...
T Consensus 463 ---TdnHlvLvDl~~~-g--~~G~~ae~~Le~~~I~~Nkn~---iP~-d~---------------------------~~~ 505 (586)
T PLN02271 463 ---TDNHLLLWDLTTL-G--LTGKNYEKVCEMCHITLNKTA---IFG-DN---------------------------GTI 505 (586)
T ss_pred ---CCcceeeecCccc-C--CCHHHHHHHHHHcCeEecccc---CCC-CC---------------------------CCC
Confidence 2246676666442 1 445678899999999863110 000 00 112
Q ss_pred CCCEEEEecCCCCC----HHHHHHHHHHHHHHHhh
Q 007454 553 GITVVTASLGYLAN----FEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 553 ~~g~VR~Slg~~tt----~eDVd~l~~~l~~~l~~ 583 (603)
..+.||+....+|+ ++|+..+.++|.+.++.
T Consensus 506 ~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~~ 540 (586)
T PLN02271 506 SPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQI 540 (586)
T ss_pred CCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHhh
Confidence 23578888777774 69999999999988873
No 73
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.64 E-value=1.1e-13 Score=151.16 Aligned_cols=321 Identities=10% Similarity=0.072 Sum_probs=189.5
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHH-HHHHHHHHcCCCCCcEEEe
Q 007454 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESA-MKKRIMDFLNISENDYVYD 193 (603)
Q Consensus 115 aa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~-aR~~Ia~~lna~~~e~vf~ 193 (603)
++-..+++.+++++...+... | ..+.+.+....|....+.+|+ +++++++++|.....+.+.
T Consensus 35 ~sen~~~p~v~~a~~~~~~~~-------~----------~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~ 97 (416)
T PRK13034 35 ASENFTSPAVMEAQGSVLTNK-------Y----------AEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPH 97 (416)
T ss_pred ccccCCCHHHHHHhcchhhcC-------C----------CCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecC
Confidence 444456999999876543110 1 113333444334334445555 9999999999864333223
Q ss_pred ccCchHHHHHHHHHHcCCEEEEEe------------------------c--cCCccccCHHHHHHHHhhcCCCCCCeeEE
Q 007454 194 YESEAVEAMIRTSEKRGARVMSAE------------------------F--SWPRLRINSEKLRKMVVSKGKKKKQRGLF 247 (603)
Q Consensus 194 ~es~sV~~~~~~a~~~Ga~V~~~~------------------------~--~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv 247 (603)
.-..+...++...-+.|.+|...+ + +..++.++.++|++.+.. .++++|
T Consensus 98 SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~klV 172 (416)
T PRK13034 98 SGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKE-----HKPKLI 172 (416)
T ss_pred CcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhh-----cCCeEE
Confidence 333444444444445666655422 1 111334889999998853 146777
Q ss_pred EEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCC---CCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 007454 248 VFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLS---LVRPDFLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 248 ~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls---~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
++.. .++|...|+..+ ++|+++|+.+++|+++..|. ...+.. ...+|++++|+||++++ |.| |+++.+++
T Consensus 173 i~~~--~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~--~~~g~~~~~~~~~Di~~~s~~K~l~g-~~G-G~v~~~~~ 246 (416)
T PRK13034 173 IAGF--SAYPRELDFARFREIADEVGALLMVDMAHIAGL--VAAGEHPNPFPHAHVVTTTTHKTLRG-PRG-GMILTNDE 246 (416)
T ss_pred EECC--CccccccCHHHHHHHHHHcCCEEEEeCcccccC--cccCCCCCCCCCceEEEEeCcccCCC-CCC-eEEEECcH
Confidence 6643 347899999866 48999999999999987765 222221 12589999999999954 777 65555544
Q ss_pred CC-cCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhh
Q 007454 324 TV-PILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAE 402 (603)
Q Consensus 324 ~~-~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~ 402 (603)
.+ ..++...+.|+. +++..+.++++.
T Consensus 247 ~~~~~~~~~~~~~~~----------------------------------~~~~~~~~aa~~------------------- 273 (416)
T PRK13034 247 EIAKKINSAVFPGLQ----------------------------------GGPLMHVIAAKA------------------- 273 (416)
T ss_pred HHHHHHHhhcCCccc----------------------------------CCccHHHHHHHH-------------------
Confidence 32 223322221210 112222232222
Q ss_pred hhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEE
Q 007454 403 ADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALA 482 (603)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivs 482 (603)
.++..+...+.....+++..++++|.++|.++ |. .+.++. ...+++.
T Consensus 274 ---------------------~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~------G~---~~~~~~---~~t~i~~ 320 (416)
T PRK13034 274 ---------------------VAFGEALQPEFKTYAKQVIANAQALAEVLKER------GY---DLVSGG---TDNHLLL 320 (416)
T ss_pred ---------------------HHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc------CC---EeccCC---CCCcEEE
Confidence 23333222244566789999999999999876 33 333331 2467777
Q ss_pred EEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecC
Q 007454 483 FNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLG 562 (603)
Q Consensus 483 Fnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg 562 (603)
+.+.+.. .....+++.+.++||.++.-.. +..... ... ...+|+|++
T Consensus 321 v~~~~~~---~~~~~~~~~L~~~GI~v~~~~~--p~~~~~---------------------------p~~-~~~lR~~~~ 367 (416)
T PRK13034 321 VDLRPKG---LSGKDAEQALERAGITVNKNTV--PGDTES---------------------------PFV-TSGIRIGTP 367 (416)
T ss_pred EEcCCCC---CCHHHHHHHHHhCCcEEeccCC--CCCCcC---------------------------CCC-CCeeEeCcH
Confidence 7775432 3455676677788998863100 000000 011 247999999
Q ss_pred CCCC----HHHHHHHHHHHHHHHh
Q 007454 563 YLAN----FEDVYRLWAFVAQFLD 582 (603)
Q Consensus 563 ~~tt----~eDVd~l~~~l~~~l~ 582 (603)
.+|+ ++||++++++|++.+.
T Consensus 368 ~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 368 AGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHh
Confidence 9655 9999999999998876
No 74
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.63 E-value=6.1e-14 Score=150.69 Aligned_cols=281 Identities=14% Similarity=0.147 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEeccCchHHHHHHHHHHcCCEEEEEeccCC---------------ccccCHHHHHHH
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDYESEAVEAMIRTSEKRGARVMSAEFSWP---------------RLRINSEKLRKM 233 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~~~~a~~~Ga~V~~~~~~~~---------------~g~i~~~~L~~~ 233 (603)
.++.+++++++++++|. ++.++++..+++...++......|..|......++ -..++.+++++.
T Consensus 77 ~~l~~~l~~~l~~~~g~-~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~ 155 (385)
T TIGR01825 77 LRLHEELEEKLAKFKKT-EAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRV 155 (385)
T ss_pred cHHHHHHHHHHHHHhCC-CcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHH
Confidence 35677888999999986 35566654443333333333344554443221110 013678888888
Q ss_pred HhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCC-------CCCCCCCCCCCcEEEEccc
Q 007454 234 VVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKD-------MDSFGLSLVRPDFLICSFY 305 (603)
Q Consensus 234 l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~-------m~~ldls~~~~Dflv~S~h 305 (603)
|... ..+++++|+++.+.|.||.+.|++.+ ++|+++|+++++|.++..+.- ...+++. .+.||++.|++
T Consensus 156 l~~~--~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~s 232 (385)
T TIGR01825 156 LREN--PSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLS 232 (385)
T ss_pred HHhh--ccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEecc
Confidence 8642 12368999999999999999999866 589999999999999865420 0013444 57899999999
Q ss_pred ccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccC-CCChhhhhhhhh
Q 007454 306 QIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA-TNTFSGPMSIEM 384 (603)
Q Consensus 306 K~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~G-T~n~~gi~gl~~ 384 (603)
|+|| ..| |.++.+++.++.+.... . . +..+ +.+....+++.
T Consensus 233 K~~~--~~g-G~~~~~~~~~~~~~~~~------------~-------------------~---~~~~~~~~~~~~~a~~- 274 (385)
T TIGR01825 233 KAIG--VVG-GYAAGHKELIEYLKNRA------------R-------------------P---FLFSTAQPPAVVAALA- 274 (385)
T ss_pred HHhh--cCC-CEEecCHHHHHHHHHhC------------c-------------------c---ccccCCCCHHHHHHHH-
Confidence 9999 445 76766655543332100 0 0 0111 22333333322
Q ss_pred hhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCc
Q 007454 385 RQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNA 464 (603)
Q Consensus 385 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~p 464 (603)
++++.+.+ .....++.+.+.+++.+.|.++ |
T Consensus 275 ---------------------------------------~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~------g-- 305 (385)
T TIGR01825 275 ---------------------------------------AAVDELQR--SPELMERLWDNTRFFKAGLGKL------G-- 305 (385)
T ss_pred ---------------------------------------HHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc------C--
Confidence 46665433 2345667778899999999875 2
Q ss_pred eEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccccccc
Q 007454 465 LVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDN 544 (603)
Q Consensus 465 lv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 544 (603)
++++.| .++++.+.+... .-..++.++|+++ ||.++.+.....
T Consensus 306 -~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~L~~~-gi~v~~~~~~~~--------------------------- 348 (385)
T TIGR01825 306 -YDTGGS-----ETPITPVVIGDE---KAAQEFSRRLFDE-GIFAQSIVFPTV--------------------------- 348 (385)
T ss_pred -CCCCCC-----CCCEEEEEECCH---HHHHHHHHHHHHC-CcEEcccCCCCC---------------------------
Confidence 333433 245777665431 0112344556555 999874432110
Q ss_pred ccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 545 NRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 545 ~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
..+...||+++++++|.|||+++++.|+++++.
T Consensus 349 ------~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 349 ------PRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred ------CCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 112258999999999999999999999998754
No 75
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.63 E-value=2.2e-14 Score=152.02 Aligned_cols=258 Identities=12% Similarity=0.136 Sum_probs=169.6
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCc-hH---------------------HHHHHHHHHcCCEEEEEeccCCccccCHHHH
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESE-AV---------------------EAMIRTSEKRGARVMSAEFSWPRLRINSEKL 230 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~-sV---------------------~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L 230 (603)
.+.|+.|++++|+++++++++.... ++ ......++..|+++..++++ +++.++.++|
T Consensus 57 ~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~d~~~l 135 (346)
T TIGR01141 57 AELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLD-EDGQLDLEDI 135 (346)
T ss_pred HHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccC-CCCCCCHHHH
Confidence 5799999999999999998754221 11 12233456779999999886 4677899999
Q ss_pred HHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhC--CcEEEEecccc--CCCCCCCCCC-CCCCCcEEEEcc
Q 007454 231 RKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQEN--DWHILIDACAL--GPKDMDSFGL-SLVRPDFLICSF 304 (603)
Q Consensus 231 ~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~--g~~vlvDAaq~--~~~~m~~ldl-s~~~~Dflv~S~ 304 (603)
++.+. ++++++.++..+|.||..+|++.+ ++++.. |.++++|.++. .... ..++. .....++++.|+
T Consensus 136 ~~~~~------~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~-~~~~~~~~~~~~i~~~S~ 208 (346)
T TIGR01141 136 LVAID------DKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEP-STLPLLAEYPNLIVLRTL 208 (346)
T ss_pred HHhcC------CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCc-cHHHHHhhCCCEEEEehh
Confidence 98764 368899999999999999999855 466655 99999999854 2110 01111 122335778899
Q ss_pred cccCCCCCCc--eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhh
Q 007454 305 YQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSI 382 (603)
Q Consensus 305 hK~fG~~P~G--~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl 382 (603)
+|+|| +.| +|.+++++++.+.+++.... | +.+.++..
T Consensus 209 sK~~g--~~G~r~G~~~~~~~~~~~~~~~~~~------------~-------------------------~~~~~~~~-- 247 (346)
T TIGR01141 209 SKAFG--LAGLRIGYAIANAEIIDALNKVRAP------------F-------------------------NLSRLAQA-- 247 (346)
T ss_pred hHhhh--chhhhceeeecCHHHHHHHHhccCC------------C-------------------------CCCHHHHH--
Confidence 99998 336 79999877765444421000 0 01111111
Q ss_pred hhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 007454 383 EMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTE 461 (603)
Q Consensus 383 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~h~~~~ 461 (603)
.++..++.. .+..+.++.+.+++++++.|.++.
T Consensus 248 -----------------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~----- 281 (346)
T TIGR01141 248 -----------------------------------------AAIAALRDDDFIEKTVEEINAERERLYDGLKKLP----- 281 (346)
T ss_pred -----------------------------------------HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence 122222222 256777888888999999998652
Q ss_pred CCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccc
Q 007454 462 GNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSK 541 (603)
Q Consensus 462 g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~ 541 (603)
| ++++.+ .++.+.|.+++ + .+.+.+.+.++||.++.|....
T Consensus 282 g---~~~~~~-----~g~~~~~~~~~-~-----~~~~~~~L~~~gI~v~~g~~f~------------------------- 322 (346)
T TIGR01141 282 G---LEVYPS-----DANFVLIRFPR-D-----ADALFEALLEKGIIVRDLNSYP------------------------- 322 (346)
T ss_pred C---CEECCC-----cCCEEEEecCC-C-----HHHHHHHHHHCCeEEEeCCCcC-------------------------
Confidence 2 454432 46788888875 2 2334455556899999774320
Q ss_pred cccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHH
Q 007454 542 SDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFV 577 (603)
Q Consensus 542 ~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l 577 (603)
.. .+.+|+|++ |.+|++++++.|
T Consensus 323 ---------~~-~~~iRls~~---~~~~i~~~~~~l 345 (346)
T TIGR01141 323 ---------GL-PNCLRITVG---TREENDRFLAAL 345 (346)
T ss_pred ---------CC-CCeEEEecC---CHHHHHHHHHHh
Confidence 11 368999977 899999999876
No 76
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.63 E-value=6e-15 Score=159.24 Aligned_cols=137 Identities=11% Similarity=0.178 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEec-----------------------cCchHH-HHHHHHHHcCCEEEEEeccCCccccC
Q 007454 171 LESAMKKRIMDFLNISENDYVYDY-----------------------ESEAVE-AMIRTSEKRGARVMSAEFSWPRLRIN 226 (603)
Q Consensus 171 ~~~~aR~~Ia~~lna~~~e~vf~~-----------------------es~sV~-~~~~~a~~~Ga~V~~~~~~~~~g~i~ 226 (603)
..++.++++++++|+ ++.++|.. ...+.. .+...+++.|+++.+++.. +
T Consensus 48 ~~~~le~~la~l~g~-~~~l~~~sG~~al~~~l~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~------d 120 (378)
T TIGR01329 48 TRTALESLLAKLDKA-DRAFAFSSGMAALDVITRLLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT------D 120 (378)
T ss_pred HHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC------C
Confidence 356788888888887 33343321 111221 1223455678887777652 6
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccc
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFY 305 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~h 305 (603)
.+++++.|. ++|+++.+...+|.||.+.|++.| ++||++|+.+++|+++..|....++ .+++|++++|+|
T Consensus 121 ~~~le~~i~------~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l---~~g~Di~v~S~t 191 (378)
T TIGR01329 121 LDKVKAALG------PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPL---ELGADIVYHSAT 191 (378)
T ss_pred HHHHHHhcC------cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh---hcCCcEEEEecc
Confidence 788888875 368999999999999999999855 6899999999999999877622233 458999999999
Q ss_pred ccCCCCCCc--eEEEEEeCCC
Q 007454 306 QIFGENPSG--FGCLFVKKST 324 (603)
Q Consensus 306 K~fG~~P~G--~G~L~vkk~~ 324 (603)
|++++ |.| .|+++++++.
T Consensus 192 K~l~G-~~~~~~G~v~~~~~~ 211 (378)
T TIGR01329 192 KFLAG-HSDVMAGVLAVKGEE 211 (378)
T ss_pred eeccC-CccceeEEEEeCcHH
Confidence 98875 777 8888887654
No 77
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.63 E-value=6.5e-14 Score=152.14 Aligned_cols=280 Identities=14% Similarity=0.093 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEeccCchHHHHHHHHHH--cCCEEEEEec-----------------cCCccccCHHH
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDYESEAVEAMIRTSEK--RGARVMSAEF-----------------SWPRLRINSEK 229 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~~~~a~~--~Ga~V~~~~~-----------------~~~~g~i~~~~ 229 (603)
.....+.++++++++|. ++.++|...+.+...++..+.+ .|..|..-.. .|+. .+.++
T Consensus 90 ~~~~~~l~~~la~~~g~-~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~--~d~~~ 166 (407)
T PRK09064 90 NHYHVELERELADLHGK-EAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH--NDVAH 166 (407)
T ss_pred HHHHHHHHHHHHHHhCC-CcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC--CCHHH
Confidence 35567889999999995 5666665443333333333221 2222221111 0111 25678
Q ss_pred HHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCC---CCC-C----CCCCCCCCcEE
Q 007454 230 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPK---DMD-S----FGLSLVRPDFL 300 (603)
Q Consensus 230 L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~---~m~-~----ldls~~~~Dfl 300 (603)
|++++... ..+++++|++....|++|.+.|++.+ ++|+++|+++++|.++..|. . . . .++. ..+|++
T Consensus 167 le~~l~~~--~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~-g~g~~~~~~~~-~~~div 242 (407)
T PRK09064 167 LEELLAAA--DPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPR-GGGIAERDGLM-DRIDII 242 (407)
T ss_pred HHHHHHhc--cCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCC-CCChHHhcCCC-CCCeEE
Confidence 88888631 11367899999999999999999865 58999999999999986331 0 0 0 1221 257999
Q ss_pred EEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhh
Q 007454 301 ICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPM 380 (603)
Q Consensus 301 v~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~ 380 (603)
+.++.|.|| +.| |.++.++++++.+.... .+ + . +..+.++ ..++
T Consensus 243 ~~t~sKa~g--~~G-G~~~~~~~~~~~l~~~~-~~-----------~-----------------~---~t~~~~~-~~~~ 286 (407)
T PRK09064 243 EGTLAKAFG--VMG-GYIAGSAALVDAVRSYA-PG-----------F-----------------I---FTTSLPP-AIAA 286 (407)
T ss_pred EEecchhhh--ccC-ceEecCHHHHHHHHHhC-cc-----------c-----------------c---ccCcCCH-HHHH
Confidence 999999999 556 77766666544332100 00 0 0 1122222 2222
Q ss_pred hhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 007454 381 SIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNT 460 (603)
Q Consensus 381 gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~ 460 (603)
+.. ++++++++. ....++++.++++|.+.|.++
T Consensus 287 aa~----------------------------------------~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~----- 319 (407)
T PRK09064 287 AAL----------------------------------------ASIRHLKES--NEERERHQERAAKLKAALDAA----- 319 (407)
T ss_pred HHH----------------------------------------HHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-----
Confidence 211 477777654 344678889999999999875
Q ss_pred CCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccc
Q 007454 461 EGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKS 540 (603)
Q Consensus 461 ~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~ 540 (603)
|. .++++ .++++.|.+.+. .-..++.++|++++||.++... .+.
T Consensus 320 -g~---~~~~~-----~~~iv~i~~~~~---~~~~~l~~~L~~~~gi~v~~~~---~p~--------------------- 363 (407)
T PRK09064 320 -GI---PVMPN-----ESHIVPVMVGDP---EKCKKASDMLLEEHGIYVQPIN---YPT--------------------- 363 (407)
T ss_pred -CC---CCCCC-----CCCEEEEEeCCH---HHHHHHHHHHHHhCCEEEeeEC---CCC---------------------
Confidence 22 23332 367888887541 0112344556677899997531 100
Q ss_pred ccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 541 KSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 541 ~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
...+...||+|++.++|.+|++++++.|+++++.
T Consensus 364 ---------~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 364 ---------VPRGTERLRITPTPFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred ---------CCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 0112257999999999999999999999998764
No 78
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.62 E-value=1.3e-13 Score=148.41 Aligned_cols=147 Identities=15% Similarity=0.198 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHcCCCCCcEEEeccCc-h---------------------HHHHHHHHHHcCCEEEEEeccCC--ccccCH
Q 007454 172 ESAMKKRIMDFLNISENDYVYDYESE-A---------------------VEAMIRTSEKRGARVMSAEFSWP--RLRINS 227 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~vf~~es~-s---------------------V~~~~~~a~~~Ga~V~~~~~~~~--~g~i~~ 227 (603)
..+.|+.|++++|+++++++++.... + ..+....++..|+++..++++.. +..++.
T Consensus 68 ~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 147 (380)
T PRK06225 68 FPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTP 147 (380)
T ss_pred hHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCH
Confidence 45799999999999999997754221 1 11223345677999998886421 347899
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH---HH-HHHHhCCcEEEEecccc---CCCCCCC-CCCCCCCCcE
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL---WM-RIAQENDWHILIDACAL---GPKDMDS-FGLSLVRPDF 299 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~---~i-~~a~e~g~~vlvDAaq~---~~~~m~~-ldls~~~~Df 299 (603)
++|++.+.. +++++.+...+|.||..+|.+ .+ +.|+++|+++++|.++. .++ .+ ..+. -.-.+
T Consensus 148 ~~l~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~-~~~~i 218 (380)
T PRK06225 148 ELVKENMDE------NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH--TLAAEYA-PEHTV 218 (380)
T ss_pred HHHHhhcCC------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC--CchhhcC-CCCEE
Confidence 999988863 578888888899999999854 23 46899999999999752 122 11 1111 12356
Q ss_pred EEEcccccCCCCCCc--eEEEEEeCCCCcCcC
Q 007454 300 LICSFYQIFGENPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 300 lv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~ 329 (603)
++.|+.|+|| +.| +|++++++.+++.+.
T Consensus 219 ~~~s~SK~~g--~~G~RiG~i~~~~~l~~~~~ 248 (380)
T PRK06225 219 TSYSFSKIFG--MAGLRIGAVVATPDLIEVVK 248 (380)
T ss_pred EEeechhhcC--CccceeEEEecCHHHHHHHH
Confidence 7779999999 557 699998877654443
No 79
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.62 E-value=4.6e-14 Score=147.89 Aligned_cols=241 Identities=16% Similarity=0.070 Sum_probs=160.1
Q ss_pred HHHHHHcCCEEEEEeccCCccccCH--HHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEE
Q 007454 203 IRTSEKRGARVMSAEFSWPRLRINS--EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHIL 276 (603)
Q Consensus 203 ~~~a~~~Ga~V~~~~~~~~~g~i~~--~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vl 276 (603)
...++..|.++..++.++ .+..+. +.++..+. ++++++.+++.+|.||..+|++.+ ++|+++|++++
T Consensus 97 ~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~------~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~i 169 (350)
T cd00609 97 EAAARLAGAEVVPVPLDE-EGGFLLDLELLEAAKT------PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILII 169 (350)
T ss_pred HHHHHHCCCEEEEEeccc-ccCCccCHHHHHhhcC------ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEE
Confidence 445566778888888764 333333 44444332 468999999999999999998744 46899999999
Q ss_pred EeccccCCCCC--CC---CCCCCCCCcEEEEcccccCCCCCCceEEEEEeC-CCCcCcCCCCCCCceecccccccccccc
Q 007454 277 IDACALGPKDM--DS---FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKK-STVPILVDNTSSGMVSLLPAKKQLWLTD 350 (603)
Q Consensus 277 vDAaq~~~~~m--~~---ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk-~~~~~L~p~~~gG~v~~~~~~~~~~~~~ 350 (603)
+|+++.++..- .. ......+.|+++.|++|+||.++.++|++++++ ...+.+....
T Consensus 170 vD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~------------------ 231 (350)
T cd00609 170 SDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLL------------------ 231 (350)
T ss_pred EecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHH------------------
Confidence 99987653200 11 335567789999999999973245689999887 4443332100
Q ss_pred ccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHH
Q 007454 351 EFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVD 430 (603)
Q Consensus 351 ~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~ 430 (603)
. ...++++..+..++. .+++...
T Consensus 232 --------------~---~~~~~~~~~~~~~~~----------------------------------------~~l~~~~ 254 (350)
T cd00609 232 --------------P---YTTSGPSTLSQAAAA----------------------------------------AALDDGE 254 (350)
T ss_pred --------------H---hcccCCChHHHHHHH----------------------------------------HHHhCcH
Confidence 0 122344555444332 3444332
Q ss_pred hcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEe
Q 007454 431 SLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLS 510 (603)
Q Consensus 431 ~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr 510 (603)
.++.++.++++.+.+++.+.|.++.. ..+.. ...+..+.|.+.+. .....+.+++.++||.++
T Consensus 255 -~~~~~~~~~~~~~~~~l~~~L~~~~~--------~~~~~----~~~g~~~~~~~~~~----~~~~~~~~~l~~~gi~i~ 317 (350)
T cd00609 255 -EHLEELRERYRRRRDALLEALKELGP--------LVVVK----PSGGFFLWLDLPEG----DDEEFLERLLLEAGVVVR 317 (350)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCC--------ccccC----CCccEEEEEecCCC----ChHHHHHHHHHhCCEEEe
Confidence 35788888999999999999987531 11111 23566777776653 234567888888999998
Q ss_pred eCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 007454 511 YGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 578 (603)
Q Consensus 511 ~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~ 578 (603)
.+..+.. .....+|++++.+ .|||++++++|+
T Consensus 318 ~~~~~~~----------------------------------~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 318 PGSAFGE----------------------------------GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred ccccccc----------------------------------CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 6644321 1225899999999 999999999885
No 80
>PLN02721 threonine aldolase
Probab=99.60 E-value=8.4e-14 Score=147.47 Aligned_cols=119 Identities=13% Similarity=0.145 Sum_probs=80.4
Q ss_pred HHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCC-CCCCeeEEEEeC-ccccccccccH---H-HHHHHHhCCcEEEEe
Q 007454 205 TSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGK-KKKQRGLFVFPL-HSRMTGARYPY---L-WMRIAQENDWHILID 278 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~-~~~~t~Lv~~~~-~Sn~TG~~~pl---~-~i~~a~e~g~~vlvD 278 (603)
.++..|+++..++.+ +++.++.++|++.|....+ ..++++++.+.. .+|.||..+|. + +.++|+++|+++++|
T Consensus 99 ~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD 177 (353)
T PLN02721 99 ISTLGGVHPRTVKNN-EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHID 177 (353)
T ss_pred hhhhcCceeEecCCC-cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEE
Confidence 345668888888776 4678999999999973110 013678888855 56779999985 3 345789999999999
Q ss_pred ccccCCCC-CCCCCCC--CCCCcEEEEcccccCCCCCCceEEEEEeCCCCc
Q 007454 279 ACALGPKD-MDSFGLS--LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVP 326 (603)
Q Consensus 279 Aaq~~~~~-m~~ldls--~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~ 326 (603)
+++..+.. +..+++. ..++|++++|+||+||. |.| |+++.+++.++
T Consensus 178 ~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~-~~G-~~~~~~~~~~~ 226 (353)
T PLN02721 178 GARIFNASVALGVPVHRLVKAADSVSVCLSKGLGA-PVG-SVIVGSKSFIR 226 (353)
T ss_pred chhhhcchhhhCCCHHHHhhhCCEEEEecccccCC-cee-eEEecCHHHHH
Confidence 98654310 0011221 23789999999999995 544 34555555443
No 81
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.59 E-value=5.4e-13 Score=146.41 Aligned_cols=135 Identities=13% Similarity=0.051 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEe------------------------ccCchHHHH-HHHHHHcCCEEEEEeccCCccc
Q 007454 170 GLESAMKKRIMDFLNISENDYVYD------------------------YESEAVEAM-IRTSEKRGARVMSAEFSWPRLR 224 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~------------------------~es~sV~~~-~~~a~~~Ga~V~~~~~~~~~g~ 224 (603)
..+++.+++|+++.|+.. .+.+. .++.+...+ ...+++.|+++++++++
T Consensus 64 p~~~~le~~lA~l~g~~~-av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~----- 137 (433)
T PRK08134 64 PTVAVLEERVAALEGGVG-AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG----- 137 (433)
T ss_pred hHHHHHHHHHHHHhCCCc-EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-----
Confidence 446678888999988754 23221 122222111 22345678888877753
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEc
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICS 303 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S 303 (603)
+.++|+++|.+ +|+||.+.+.+|.+|.+.|++.| ++||++|+.+++|++|..|+ ....+ .+++|++++|
T Consensus 138 -d~~~l~~~i~~------~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~--~~~pl-~~GaD~vv~S 207 (433)
T PRK08134 138 -DIDGWRAAIRP------NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPY--LLRPF-EHGADLVYHS 207 (433)
T ss_pred -CHHHHHHhcCC------CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccc--cCCch-hcCCCEEEec
Confidence 67889988863 69999999999999999999965 58999999999999999998 44444 6799999999
Q ss_pred ccccCCCCCCc--eEEEEEeC
Q 007454 304 FYQIFGENPSG--FGCLFVKK 322 (603)
Q Consensus 304 ~hK~fG~~P~G--~G~L~vkk 322 (603)
+|||+| |.| +|.+++..
T Consensus 208 ~tK~l~--g~g~~~gG~v~~~ 226 (433)
T PRK08134 208 ATKFLG--GHGTAIGGVLVDG 226 (433)
T ss_pred cccccC--CCCCceEEEEEec
Confidence 999999 556 78888753
No 82
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.57 E-value=1.3e-12 Score=132.28 Aligned_cols=256 Identities=16% Similarity=0.189 Sum_probs=180.7
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHHHH-HhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEc
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIA-QENDWHILIDACALGPKDMDSFGLSLVRPDFLICS 303 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~~a-~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S 303 (603)
+..+++-..|..+ .....||.|+.+..-||.-+++..|..| |..|++|=.|-|.++|- .||-|..|++||..-.
T Consensus 199 lRteDILd~IEkn---gDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgN--VpL~LHdWgVDFACWC 273 (465)
T KOG3846|consen 199 LRTEDILDTIEKN---GDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGN--VPLQLHDWGVDFACWC 273 (465)
T ss_pred hhHHHHHHHHHhc---CCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcC--CceEEeecCCceEEEe
Confidence 4566777777532 3467999999999999999999988776 55899999999999997 7999999999999999
Q ss_pred ccccCCCCCCceEEEEEeCCCCcCcCCCCCC--CceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhh
Q 007454 304 FYQIFGENPSGFGCLFVKKSTVPILVDNTSS--GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMS 381 (603)
Q Consensus 304 ~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~g--G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~g 381 (603)
.||.....|.|+|.|+|.........|...| |. . +.. . +.++. .++...+ .-+ |+...|++...++
T Consensus 274 SYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh-~--~s~-R-F~Mdn----vl~lipG-a~G--fRiSNPpi~~v~a 341 (465)
T KOG3846|consen 274 SYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGH-D--PSK-R-FQMDN----VLELIPG-ALG--FRISNPPIIDVVA 341 (465)
T ss_pred eecccccCCCccceeeeehhhhcchhhHHhhhccC-C--cch-h-hhhcc----ccccCcc-ccc--cccCCCcHhHHHH
Confidence 9997532388999999987766555666555 32 0 110 0 10110 1221111 112 5666666666655
Q ss_pred hhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 007454 382 IEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTE 461 (603)
Q Consensus 382 l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~ 461 (603)
|. ..|+..++..+++.++|...|+.||..-|+.++..++.
T Consensus 342 l~----------------------------------------~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~ 381 (465)
T KOG3846|consen 342 LR----------------------------------------SSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHP 381 (465)
T ss_pred HH----------------------------------------hhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCch
Confidence 54 68888888889999999999999998888766533322
Q ss_pred ---CCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccc
Q 007454 462 ---GNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREA 538 (603)
Q Consensus 462 ---g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~ 538 (603)
..+.+.|..|....+||--+++.+.... +.+.|.|- ++|+. |.
T Consensus 382 ~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~-----~~vfqeL~-krGv~------~D---------------------- 427 (465)
T KOG3846|consen 382 LRTEKLFFTIITPTSTDERGCQLSLYFSSPT-----PKVFQELH-KRGVI------GD---------------------- 427 (465)
T ss_pred hhhcceeEEEeCCcccccccceEEEEeCCCc-----hHHHHHHH-HcCee------cc----------------------
Confidence 3467889999876788888877775532 33445553 33332 21
Q ss_pred ccccccccccCCCCCCCEEEEec-CCCCCHHHHHHHHHHHHHHHhh
Q 007454 539 KSKSDNNRKDKANLGITVVTASL-GYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~g~VR~Sl-g~~tt~eDVd~l~~~l~~~l~~ 583 (603)
.+...+||+.. ..||||.|||+++.+|.+.+|.
T Consensus 428 ------------kR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~ 461 (465)
T KOG3846|consen 428 ------------KRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDK 461 (465)
T ss_pred ------------ccCCCceEeecchhhccHHHHHHHHHHHHHHHHH
Confidence 12235788775 6799999999999999999876
No 83
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.57 E-value=4.4e-13 Score=145.48 Aligned_cols=275 Identities=14% Similarity=0.100 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEeccCchHHHHHHHH-----------------------HHcCCEEEEEeccCCccccC
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDYESEAVEAMIRTS-----------------------EKRGARVMSAEFSWPRLRIN 226 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~~~~a-----------------------~~~Ga~V~~~~~~~~~g~i~ 226 (603)
....+.++++++++|. ++.++|...+.+....+..+ +..|+++...+ ..+
T Consensus 90 ~~~~~Le~~la~~~g~-~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~------~~d 162 (402)
T TIGR01821 90 IPHVELEAELADLHGK-ESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFR------HND 162 (402)
T ss_pred HHHHHHHHHHHHHhCC-CeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEEC------CCC
Confidence 3456888999999995 44555544333322222222 22333333221 125
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCC--------CCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDS--------FGLSLVRP 297 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~--------ldls~~~~ 297 (603)
.++|++++... ..+++++|++...+|.+|.+.|++.+ ++|+++|+++++|.+|..|.- .+ .++. .++
T Consensus 163 ~~~l~~~l~~~--~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~-g~~g~g~~~~~~~~-~~~ 238 (402)
T TIGR01821 163 VAHLEKLLQSV--DPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLY-GPRGGGIAERDGLM-HRI 238 (402)
T ss_pred HHHHHHHHHhc--cCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccccccc-CCCCCccchhccCC-CCC
Confidence 67888888631 11257999999999999999999866 589999999999999874420 11 1111 247
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 298 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
|+++.++-|.||. .| |+++.++++++.+.... .+ + . + .++.+..
T Consensus 239 div~~t~sKa~g~--~G-G~i~~~~~~~~~l~~~~-~~-----------~-----------------~---~-t~~~~~~ 282 (402)
T TIGR01821 239 DIIEGTLAKAFGV--VG-GYIAASRKLIDAIRSYA-PG-----------F-----------------I---F-TTSLPPA 282 (402)
T ss_pred eEEEEechhhhcc--CC-ceeecCHHHHHHHHHhC-cC-----------c-----------------e---e-cCcCCHH
Confidence 9999999999993 34 55555555443332100 00 0 0 1 1222222
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
.+++.. ++|+.+.+. +.+.++.+.++++|.+.|.++
T Consensus 283 ~~aaa~----------------------------------------aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-- 318 (402)
T TIGR01821 283 IAAGAT----------------------------------------ASIRHLKES--QDLRRAHQENVKRLKNLLEAL-- 318 (402)
T ss_pred HHHHHH----------------------------------------HHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc--
Confidence 222221 577776653 556667778999999999875
Q ss_pred CCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcc
Q 007454 458 PNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDRE 537 (603)
Q Consensus 458 ~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~ 537 (603)
|.+ ++++ .++++.+.+.+.. ...++.++|.+++||.++..... .
T Consensus 319 ----g~~---~~~~-----~~~i~~i~~~~~~---~a~~~~~~L~~~~Gi~v~~~~~p---~------------------ 362 (402)
T TIGR01821 319 ----GIP---VIPN-----PSHIVPVIIGDAA---LCKKVSDLLLNKHGIYVQPINYP---T------------------ 362 (402)
T ss_pred ----CCC---cCCC-----CCCEEEEEeCCHH---HHHHHHHHHHhcCCEEEEeECCC---C------------------
Confidence 222 2222 4678888764311 12234556667789999863210 0
Q ss_pred cccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 538 AKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 538 ~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
...+...||+|++.++|.+||+++++.|++++++
T Consensus 363 ------------~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 363 ------------VPRGTERLRITPTPAHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred ------------CCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 0112258999999999999999999999998764
No 84
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.57 E-value=4.2e-13 Score=144.62 Aligned_cols=319 Identities=13% Similarity=0.082 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHcCCCCCcEEEeccCc----------------------hHHHHHHHHHHcCCEEEEEeccCCccccCHHH
Q 007454 172 ESAMKKRIMDFLNISENDYVYDYESE----------------------AVEAMIRTSEKRGARVMSAEFSWPRLRINSEK 229 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~vf~~es~----------------------sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~ 229 (603)
.++.|++|++++|++ ..+++...+. ...+....++..|++++.++++..++.++.++
T Consensus 31 ~~~le~~la~~~g~~-~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~ 109 (380)
T TIGR03588 31 VPAFEEALAEYVGAK-YAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGNIDEDA 109 (380)
T ss_pred HHHHHHHHHHHHCCC-eEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCCcCHHH
Confidence 457788888888874 3343321111 12223445567899999999863467789999
Q ss_pred HHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCC----cEEEEcc
Q 007454 230 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRP----DFLICSF 304 (603)
Q Consensus 230 L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~----Dflv~S~ 304 (603)
|++.|... ..++|+++.+. |.+|...|++.| ++|+++|++|++|++|..|. .++...++. |+.++||
T Consensus 110 l~~~i~~~--~~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~---~~~~~~~g~~~~~d~~~~S~ 181 (380)
T TIGR03588 110 LEKKLAAA--KGKLPKAIVPV---DFAGKSVDMQAIAALAKKHGLKIIEDASHALGA---EYGGKPVGNCRYADATVFSF 181 (380)
T ss_pred HHHHhhcc--cCCCceEEEEe---CCCCccCCHHHHHHHHHHcCCEEEEECCCcccC---ccCCEeCCCccccceEEEec
Confidence 99999731 11257777754 468999999855 58999999999999999986 255555666 9999999
Q ss_pred c--ccCCCCCCceEEEEEe-CCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhh
Q 007454 305 Y--QIFGENPSGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMS 381 (603)
Q Consensus 305 h--K~fG~~P~G~G~L~vk-k~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~g 381 (603)
| |+++. | .-|+++.+ ++..+.+++...+|..... ..+.. ... .+.. ++.++. |
T Consensus 182 ~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~----~~~~~-------~~~---~~~~--~~~~~~------g 237 (380)
T TIGR03588 182 HPVKIITT-A-EGGAVTTNDEELAERMRLLRSHGITKDP----LLFEK-------QDE---GPWY--YEQQEL------G 237 (380)
T ss_pred CCCCcccc-c-CceEEEECCHHHHHHHHHHHHCCCCCCc----ccccc-------ccc---Ccce--eeeecc------c
Confidence 9 88874 3 23444443 3343444432222321100 00000 000 0011 122221 1
Q ss_pred hhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 007454 382 IEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTE 461 (603)
Q Consensus 382 l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~ 461 (603)
+.. .-.++++. .++..++. ++.+.++-+.+.+++.+.|..++
T Consensus 238 ~n~------~m~~l~aa-------------------------~g~~qL~~--l~~~~~~r~~~~~~~~~~L~~~~----- 279 (380)
T TIGR03588 238 FNY------RMTDIQAA-------------------------LGLSQLKK--LDRFVAKRREIAARYDRLLKDLP----- 279 (380)
T ss_pred ccc------CccHHHHH-------------------------HHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCC-----
Confidence 110 00111111 23333433 68888888999999999998763
Q ss_pred CCceEEEeCCCCCCCCC-CEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccc
Q 007454 462 GNALVKIYGPKIRFDRG-PALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKS 540 (603)
Q Consensus 462 g~plv~Iygp~~~~~rg-~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~ 540 (603)
.++++.+....... ....+.+...+| +..+.+.+.+.++||.++..+.+-. ..+. ..... ..
T Consensus 280 ---~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~r~~l~~~L~~~gI~~~~~~~~~~--~~~~-------~~~~~--~~- 342 (380)
T TIGR03588 280 ---YFTPLTIPLGSKSAWHLYPILLDQEFG--CTRKEVFEALRAAGIGVQVHYIPVH--LQPY-------YRQGF--GD- 342 (380)
T ss_pred ---CccCCCCCCCCEeEEEEEEEEECCcCC--CCHHHHHHHHHHCCCCcccCCcccc--cChh-------hhccC--Cc-
Confidence 25555442111111 122222322122 3456666666788999987653311 1111 00000 00
Q ss_pred ccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 007454 541 KSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 541 ~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l 581 (603)
..... ........|++.++...|.+||+++++.|+++|
T Consensus 343 ~~~p~---a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 343 GDLPS---AENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CCCcH---HHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 00000 001122589999999999999999999999875
No 85
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.56 E-value=8.3e-13 Score=154.19 Aligned_cols=121 Identities=13% Similarity=0.130 Sum_probs=95.7
Q ss_pred HHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc-HHHH-HHHHhCCcEEEEecccc
Q 007454 205 TSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP-YLWM-RIAQENDWHILIDACAL 282 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p-l~~i-~~a~e~g~~vlvDAaq~ 282 (603)
+++..|.+|+.++.+ ++|.+|.++|+++|... +.++.+|++++.|| +|.+.| ++.| ++||++|..|++|++|.
T Consensus 594 sa~~~G~~Vv~V~~d-~~G~iDle~L~~~i~~~---~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~ 668 (939)
T TIGR00461 594 SAAMAGMQVVPVNCD-QDGNIDLVDLKNKAEQH---GDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANM 668 (939)
T ss_pred HHHHCCCEEEEeccC-CCCCcCHHHHHHHHhhc---CCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecCh
Confidence 356679999999987 68999999999999731 23799999999999 798877 9855 68999999999999998
Q ss_pred CCCCCCCCCCCCCCCcEEEEcccccCCC----CCCceEEEEEeCCCCcCcCCCCCCC
Q 007454 283 GPKDMDSFGLSLVRPDFLICSFYQIFGE----NPSGFGCLFVKKSTVPILVDNTSSG 335 (603)
Q Consensus 283 ~~~~m~~ldls~~~~Dflv~S~hK~fG~----~P~G~G~L~vkk~~~~~L~p~~~gG 335 (603)
.+.- ...+..++++||+++|.||+||. .|.|+|++.+|+. |.|...|+
T Consensus 669 ~al~-~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~----L~~~lPg~ 720 (939)
T TIGR00461 669 NAQV-GLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH----LIPFLPKH 720 (939)
T ss_pred hhCC-CCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh----chhhcCCC
Confidence 8652 23445679999999999997652 0346699999976 44444453
No 86
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.56 E-value=4.6e-13 Score=135.92 Aligned_cols=268 Identities=18% Similarity=0.141 Sum_probs=191.2
Q ss_pred HHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH-HHH-HHHhCCcEEEEec
Q 007454 202 MIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMR-IAQENDWHILIDA 279 (603)
Q Consensus 202 ~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~-~i~-~a~e~g~~vlvDA 279 (603)
++..+++-|++|..++.+| ...+..+++++.|... +.++|.+.|...-||+.+|+. ... ++|+++++++||+
T Consensus 107 a~D~~~r~ga~V~~v~~~~-G~~~~le~i~~~lsqh-----~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~ 180 (385)
T KOG2862|consen 107 AADCARRYGAEVDVVEADI-GQAVPLEEITEKLSQH-----KPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDT 180 (385)
T ss_pred HHHHHHhhCceeeEEecCc-ccCccHHHHHHHHHhc-----CCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEec
Confidence 3577889999999999997 6778999999999863 689999999999999999965 443 7899999999999
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceecc---ccccccccccccCCCC
Q 007454 280 CALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLL---PAKKQLWLTDEFSSCE 356 (603)
Q Consensus 280 aq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~---~~~~~~~~~~~~~~~~ 356 (603)
++++|- .++-+++|++|+.-....|..|. |.|++.+-..+.++..++....+ -+.+. .....+|.- +
T Consensus 181 VaSlgg--t~F~mDewgVDvaytgSQKaL~a-P~GLsiisfS~ka~~~~~~rK~~-~~~~yFd~~~~~~~wgc------~ 250 (385)
T KOG2862|consen 181 VASLGG--TEFEMDEWGVDVAYTGSQKALGA-PAGLSIISFSDKALEAIRDRKTK-PVSFYFDILRLGNFWGC------D 250 (385)
T ss_pred hhhcCC--ccceehhhcccEEEecchhhcCC-CCCcceeecCHHHHHHHhhccCC-ceEEEEeHHhhcchhcc------C
Confidence 877766 58999999999999999999998 89999987777776656543221 11110 011122311 1
Q ss_pred CCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHH
Q 007454 357 TEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTM 436 (603)
Q Consensus 357 ~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~ 436 (603)
-| ++. -.-|+++..+.+|. +||+++.+-|+++
T Consensus 251 ~e-----~~~---yhhT~pv~lly~Lr----------------------------------------~AL~~I~eeGL~~ 282 (385)
T KOG2862|consen 251 GE-----PRA---YHHTPPVQLLYSLR----------------------------------------AALALIAEEGLEN 282 (385)
T ss_pred Cc-----ccc---cccCCcHHHHHHHH----------------------------------------HHHHHHHHHHHHH
Confidence 12 121 24577777777765 6999988889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEE-EEEEccCCCCccCHHH-HHHHHhcCCcEEeeCcc
Q 007454 437 ISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPAL-AFNVFDWKREKIEPVL-VQKLADRENISLSYGSL 514 (603)
Q Consensus 437 i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~iv-sFnv~~~~g~~v~~~~-V~~Lad~~gI~lr~G~~ 514 (603)
+-+|-+++.+||..+|.++ |..+. .-+. +.|.|+| +..++-. +++.+ +.++-+++++.++.|.-
T Consensus 283 ~~~rH~e~s~~l~~~l~~~------GLq~f---v~~e-~~rlptvttv~vp~g----vDw~dVv~~~~~~~~vei~gglg 348 (385)
T KOG2862|consen 283 SWRRHREMSKWLKLSLEAL------GLQLF---VVDE-ELRLPTVTTVKVPYG----VDWKDVVAYAMSHYVVEIGGGLG 348 (385)
T ss_pred HHHHHHHHHHHHHHHHHHh------Cccce---ecCh-hhccCcceeeecCCC----CCHHHHHHHHHHhcCEEeccccC
Confidence 9999999999999999986 33222 2221 3454443 3444321 34444 45555666888765511
Q ss_pred cCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEe-cCCCCCHHHHHHHHHHHHHHHhh
Q 007454 515 HHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTAS-LGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 515 C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~S-lg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
....-+.||. +|...|.|-|++.++.|+.-+..
T Consensus 349 ------------------------------------~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 349 ------------------------------------PTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred ------------------------------------CCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 1122477886 57888999999999988876643
No 87
>PLN02822 serine palmitoyltransferase
Probab=99.56 E-value=2.4e-12 Score=143.19 Aligned_cols=287 Identities=13% Similarity=0.164 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEeccCchHHHHHHHHHHc---------------------CCEEEEEeccCCccccCH
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDYESEAVEAMIRTSEKR---------------------GARVMSAEFSWPRLRINS 227 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~~~~a~~~---------------------Ga~V~~~~~~~~~g~i~~ 227 (603)
.+...+.+++|+++++.+ +.++|.....++..++...-++ |+++.+++.+ +.
T Consensus 153 ~~~~~~Lee~La~~~~~~-~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n------d~ 225 (481)
T PLN02822 153 IDVHLDCETKIAKFLGTP-DSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN------DM 225 (481)
T ss_pred HHHHHHHHHHHHHHhCCC-CEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC------CH
Confidence 356778999999999964 5677754322222222222233 4444444322 45
Q ss_pred HHHHHHHhhcCC---CCCCe-eEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCC---C----CCCCCCCCC
Q 007454 228 EKLRKMVVSKGK---KKKQR-GLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPK---D----MDSFGLSLV 295 (603)
Q Consensus 228 ~~L~~~l~~~~~---~~~~t-~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~---~----m~~ldls~~ 295 (603)
++|+..+...++ +++++ +++++-..++.+|.+.|++.+ ++|+++|+++++|-++..+. . ..-+++...
T Consensus 226 ~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~ 305 (481)
T PLN02822 226 ESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIE 305 (481)
T ss_pred HHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCC
Confidence 566665542111 11234 788888888889999999865 58999999999999876332 0 001334334
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCC
Q 007454 296 RPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 375 (603)
Q Consensus 296 ~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n 375 (603)
.+|+++.|+.|-|| .+| |+++.++++++.+..... +.+ +-...++
T Consensus 306 ~~dii~~s~sKalg--~~G-G~i~g~~~ii~~~~~~~~-~~~-------------------------------fsa~lPp 350 (481)
T PLN02822 306 KIDIITAAMGHALA--TEG-GFCTGSARVVDHQRLSSS-GYV-------------------------------FSASLPP 350 (481)
T ss_pred CCeEEEecchhhhh--hCC-eEEEcCHHHHHHHHhcCC-cee-------------------------------eccccCH
Confidence 68999999999999 678 888887776654432100 100 1111222
Q ss_pred hhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC
Q 007454 376 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 455 (603)
Q Consensus 376 ~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L 455 (603)
+...+++ ++|+.++. ...+.++++.+++++.++|.++
T Consensus 351 ~~~~Aa~-----------------------------------------~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~ 387 (481)
T PLN02822 351 YLASAAI-----------------------------------------TAIDVLED--NPSVLAKLKENIALLHKGLSDI 387 (481)
T ss_pred HHHHHHH-----------------------------------------HHHHHHHh--CHHHHHHHHHHHHHHHHHHHhc
Confidence 2222221 36666543 2567788999999999999875
Q ss_pred CCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCC-----ccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHH
Q 007454 456 QHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKRE-----KIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNV 530 (603)
Q Consensus 456 ~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~-----~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~ 530 (603)
. | +.+.++ ..++++.+.+.+..+. ....+.+.+|++++||.+..+..- ...
T Consensus 388 ~-----g---~~~~~~----~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~--~~~---------- 443 (481)
T PLN02822 388 P-----G---LSIGSN----TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRS--TLD---------- 443 (481)
T ss_pred C-----C---cccCCC----CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCC--CcC----------
Confidence 3 2 344333 3578999998653221 111345777777889998765221 000
Q ss_pred HHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 531 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 531 l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
.......+|++++...|.+||+++++.|++++.+
T Consensus 444 -------------------~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 444 -------------------KCRLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred -------------------CCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 0111247999999999999999999999998765
No 88
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.56 E-value=1.5e-12 Score=141.56 Aligned_cols=275 Identities=13% Similarity=0.082 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEeccCchHHHHHHH-H----------------------HHcCCEEEEEeccCCccccC
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDYESEAVEAMIRT-S----------------------EKRGARVMSAEFSWPRLRIN 226 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~~~~-a----------------------~~~Ga~V~~~~~~~~~g~i~ 226 (603)
...++..+++++++|. +..++|.....++..++.. + +..|+++..++. .+
T Consensus 90 ~~~~~le~~la~~~g~-~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~------~d 162 (406)
T PRK13393 90 HYHVLLEAELADLHGK-EAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH------ND 162 (406)
T ss_pred HHHHHHHHHHHHHhCC-CcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC------CC
Confidence 3567888999999996 4556665443333333332 1 223333333221 25
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCC--------CCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDS--------FGLSLVRP 297 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~--------ldls~~~~ 297 (603)
.++|++.+... ..+++++|++.+++|++|.+.|++.+ ++|+++|+.+++|.+|..|. +.+ .++. .++
T Consensus 163 ~~~l~~~l~~~--~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~-~g~~G~g~~~~~~~~-~~~ 238 (406)
T PRK13393 163 PADLERKLSDL--DPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGL-YGPRGGGIAEREGLA-DRL 238 (406)
T ss_pred HHHHHHHHHhc--cCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccc-cCCCCCchhhhcCCC-CCC
Confidence 77888877531 11357899999999999999999866 58999999999999986332 011 1121 236
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 298 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
|.++.++=|.||. .| |.+..++++.+.+.... +.+ .-.++.+..
T Consensus 239 ~i~~~tlsKa~g~--~G-G~~~~~~~~~~~l~~~~-------------------------------~~~--~~t~~~~p~ 282 (406)
T PRK13393 239 TIIEGTLAKAFGV--MG-GYITGSAALCDFIRSFA-------------------------------SGF--IFTTSLPPA 282 (406)
T ss_pred eEEEEeCchhhcc--cC-ceeeCCHHHHHHHHHhC-------------------------------cCc--eecCccCHH
Confidence 8888899999993 34 55554444433222100 000 012233333
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
..++.. ++|+++...+.. ..+.+.+.++|.+.|.++
T Consensus 283 ~~aa~~----------------------------------------aaL~~~~~~~~~--~~~~~~~~~~l~~~L~~~-- 318 (406)
T PRK13393 283 VAAGAL----------------------------------------ASVRHLKASSAE--RERHQDRVARLRARLDKA-- 318 (406)
T ss_pred HHHHHH----------------------------------------HHHHHHhhCHHH--HHHHHHHHHHHHHHHHHc--
Confidence 333322 577776654322 356678888999999875
Q ss_pred CCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcc
Q 007454 458 PNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDRE 537 (603)
Q Consensus 458 ~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~ 537 (603)
|.+++ + ..++++.+.+.+. .....+.++|.+++||.++.+.. +.
T Consensus 319 ----g~~~~----~----~~~~i~~v~~~~~---~~~~~l~~~L~~~~Gi~v~~~~~--p~------------------- 362 (406)
T PRK13393 319 ----GIPHL----P----NPSHIVPVMVGDP---VLCKQISDELLDRYGIYVQPINY--PT------------------- 362 (406)
T ss_pred ----CCCcC----C----CCCCeEEEEeCCH---HHHHHHHHHHHHhCCEEEEeECC--CC-------------------
Confidence 22222 1 2567887766431 11123445566668999986411 00
Q ss_pred cccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 538 AKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 538 ~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
...+.+.||+|++.++|.+||+++++.|++++++
T Consensus 363 ------------~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 363 ------------VPRGTERLRITPSPLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred ------------CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 0112257999999999999999999999998765
No 89
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.56 E-value=1.2e-12 Score=139.55 Aligned_cols=203 Identities=13% Similarity=0.143 Sum_probs=128.1
Q ss_pred HhCCCCCCchhHHHHHHhhccCcCCCCceeeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCc
Q 007454 82 KAYPQYFDTYQIDQIRAKEYYQLSLSNHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKT 160 (603)
Q Consensus 82 ~~~p~y~~~~~vd~iR~~efp~L~~~~~vYLDyaa~t-l~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s 160 (603)
...+.|.....+..+|+ +|+.- ..+.+.|+-+-.. ..++.+++++.+..... ...+..
T Consensus 11 ~~~~~~~~~~~~~~~~~-~~~~~-~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~y~~~ 69 (361)
T PRK00950 11 KEIKPYVPGKSKEEIAR-EYGID-PESIIKLGSNENPLGPSPKAVEAIEKELSKI-------------------HRYPEP 69 (361)
T ss_pred hcCCCCCCCCCHHHHHH-HhCCC-ccceEEccCCCCCCCCCHHHHHHHHHHHHhh-------------------cCCCCC
Confidence 33455654445666766 47643 2367888655332 24566677765432100 011111
Q ss_pred cccccchHHHHHHHHHHHHHHHcCCCCCcEEE-eccCc-hHH---------------------HHHHHHHHcCCEEEEEe
Q 007454 161 QLLHGGQESGLESAMKKRIMDFLNISENDYVY-DYESE-AVE---------------------AMIRTSEKRGARVMSAE 217 (603)
Q Consensus 161 ~~~~g~~~~~~~~~aR~~Ia~~lna~~~e~vf-~~es~-sV~---------------------~~~~~a~~~Ga~V~~~~ 217 (603)
. ..+.|+.|++++|++++++++ +..+. ++. .....++..|+++..++
T Consensus 70 ~----------~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~ 139 (361)
T PRK00950 70 D----------APELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAK 139 (361)
T ss_pred C----------HHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEee
Confidence 1 257999999999999998877 33221 111 12233556788888888
Q ss_pred ccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCC--CCCCCCCCCC
Q 007454 218 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGP--KDMDSFGLSL 294 (603)
Q Consensus 218 ~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~--~~m~~ldls~ 294 (603)
.+ .++.++.++|++.+.. +++++++...+|.||.++|++.+ ++++++|+++++|.++..- .++.++ +..
T Consensus 140 ~~-~~~~~~~~~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~-~~~ 211 (361)
T PRK00950 140 RE-EDFSLDVDSVLNAITE------KTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPL-ALE 211 (361)
T ss_pred cC-CCCCcCHHHHHHHhcc------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCccchHHH-HHh
Confidence 65 3557899999988853 57888888999999999999855 5889999999999987422 111111 112
Q ss_pred CCCcEEEEcccccCCCCCCc--eEEEEEeCCCC
Q 007454 295 VRPDFLICSFYQIFGENPSG--FGCLFVKKSTV 325 (603)
Q Consensus 295 ~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~ 325 (603)
...-+++.|+-|.||. .| +|.++..++.+
T Consensus 212 ~~~vi~~~S~SK~~g~--~GlRiG~~~~~~~~~ 242 (361)
T PRK00950 212 YDNLIIGRTFSKVFGL--AGLRIGYGFVPEWLI 242 (361)
T ss_pred cCCEEEEEeehHhhcC--chhhcchhcCCHHHH
Confidence 2223666799999994 47 67776655443
No 90
>PRK07908 hypothetical protein; Provisional
Probab=99.56 E-value=3.8e-13 Score=143.20 Aligned_cols=262 Identities=15% Similarity=0.166 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHcCCCCCcEEEeccCc-h------------------HHHHHHHHHHcCCEEEEEeccCCccccCHHHHHH
Q 007454 172 ESAMKKRIMDFLNISENDYVYDYESE-A------------------VEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK 232 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~vf~~es~-s------------------V~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~ 232 (603)
..+.|+.|++++|+++++++++..+. + -......++..|.++..++.+ .+..++.+.+
T Consensus 60 ~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~l~~~~viv~~P~y~~~~~~~~~~G~~i~~v~~~-~~~~~d~~~l-- 136 (349)
T PRK07908 60 ERRARAAVAARHGRTPDEVLLLAGAAEGFALLARLRPRRAAVVHPSFTEPEAALRAAGIPVHRVVLD-PPFRLDPAAV-- 136 (349)
T ss_pred hHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHhcCCCeEEEeCCCChHHHHHHHHcCCEEEeeccC-cccCcChhHh--
Confidence 35799999999999999998764321 1 122234456678888888776 2345666533
Q ss_pred HHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEecccc--CCCCCCCCCCCCCC-CcEEEE-ccccc
Q 007454 233 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACAL--GPKDMDSFGLSLVR-PDFLIC-SFYQI 307 (603)
Q Consensus 233 ~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~--~~~~m~~ldls~~~-~Dflv~-S~hK~ 307 (603)
. ++++++.++..+|.||.++|.+.+. +++ ++.++++|.+.. .+. .+..+.... .+++++ |++|.
T Consensus 137 --~------~~~~~i~l~np~NPTG~~~~~~~l~~l~~-~~~~iIvDe~y~~~~~~--~~~~l~~~~~~~~i~i~S~SK~ 205 (349)
T PRK07908 137 --P------DDADLVVIGNPTNPTSVLHPAEQLLALRR-PGRILVVDEAFADAVPG--EPESLAGDDLPGVLVLRSLTKT 205 (349)
T ss_pred --c------cCCCEEEEcCCCCCCCCCcCHHHHHHHHh-cCCEEEEECcchhhccC--CccccccccCCCEEEEeecccc
Confidence 2 2578999999999999999998664 665 577888898752 222 123332222 355555 99999
Q ss_pred CCCCCCc--eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhh
Q 007454 308 FGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMR 385 (603)
Q Consensus 308 fG~~P~G--~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~ 385 (603)
|| +.| +|.++++++.++.+.+.... | ..++.+...+.++-
T Consensus 206 ~~--l~GlRiG~~~~~~~~~~~~~~~~~~------------~----------------------~~~~~~~~a~~~~~-- 247 (349)
T PRK07908 206 WS--LAGLRVGYALGAPDVLARLTRGRAH------------W----------------------PVGTLQLEAIAACC-- 247 (349)
T ss_pred cC--CccceeeeeecCHHHHHHHHhcCCC------------C----------------------CccHHHHHHHHHHh--
Confidence 99 446 59999887765544421100 0 01111111100000
Q ss_pred hcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCce
Q 007454 386 QSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNAL 465 (603)
Q Consensus 386 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~pl 465 (603)
. -.+.++ +.++.++.+..++++.+.|.++ |
T Consensus 248 -------------~-----------------------~~~~~~-----~~~~~~~~~~~r~~l~~~L~~~------~--- 277 (349)
T PRK07908 248 -------------A-----------------------PRAVAE-----AAADAARLAADRAEMVAGLRAV------G--- 277 (349)
T ss_pred -------------c-----------------------ccchHH-----HHHHHHHHHHHHHHHHHHHHhC------C---
Confidence 0 011122 3456777888889999999874 1
Q ss_pred EEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccc
Q 007454 466 VKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNN 545 (603)
Q Consensus 466 v~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 545 (603)
++++.|. .+..+.+.+++ ...+.+++.++||.++.|..+.
T Consensus 278 ~~~~~p~----~g~~~~~~~~~-------~~~~~~~l~~~gI~v~~g~~f~----------------------------- 317 (349)
T PRK07908 278 ARVVDPA----AAPFVLVRVPD-------AELLRKRLRERGIAVRRGDTFP----------------------------- 317 (349)
T ss_pred cEeccCC----CceEEEEECCc-------HHHHHHHHHhCCEEEEECCCCC-----------------------------
Confidence 5666653 36777777764 2456677788999999774431
Q ss_pred cccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 546 RKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 546 ~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
....+.||+|++ +.+|+++|+++|++++.+
T Consensus 318 -----~~~~~~vRis~~---~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 318 -----GLDPDYLRLAVR---PRAEVPVLVQALAEILKA 347 (349)
T ss_pred -----CCCCCeEEEEeC---CCccHHHHHHHHHHHHhc
Confidence 011258999994 899999999999998765
No 91
>PLN02590 probable tyrosine decarboxylase
Probab=99.55 E-value=9.2e-12 Score=139.49 Aligned_cols=124 Identities=13% Similarity=0.062 Sum_probs=92.1
Q ss_pred HHHHHHHHHHcCC---EEEEEeccC-CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCc
Q 007454 199 VEAMIRTSEKRGA---RVMSAEFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDW 273 (603)
Q Consensus 199 V~~~~~~a~~~Ga---~V~~~~~~~-~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~ 273 (603)
+..+.++++-.|. .|+.+|.+. .+++++.++|+++|...++....+-+|+-++-+-.||.+=|++.|+ +|+++|+
T Consensus 239 H~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~ 318 (539)
T PLN02590 239 HSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGI 318 (539)
T ss_pred hHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCC
Confidence 3344555555565 588888873 2578999999999976433334567888899999999999999775 8999999
Q ss_pred EEEEeccccCCCCC----CCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 007454 274 HILIDACALGPKDM----DSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 274 ~vlvDAaq~~~~~m----~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
++|||||-.+.--+ ..+.-..-++|-+++++|||++- |.+.|+|++|+.
T Consensus 319 WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~-p~~cg~llvr~~ 371 (539)
T PLN02590 319 WLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFA-NQTCSPLWVKDR 371 (539)
T ss_pred eEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCc-CcCEEEEEecCH
Confidence 99999863332100 01111224589999999999987 999999999975
No 92
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.54 E-value=1.3e-12 Score=142.24 Aligned_cols=283 Identities=15% Similarity=0.125 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHcCCCCCcEEEeccCchHHHH-----------------------HHHHHHcCCEEEEEeccCCccccCHH
Q 007454 172 ESAMKKRIMDFLNISENDYVYDYESEAVEAM-----------------------IRTSEKRGARVMSAEFSWPRLRINSE 228 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~-----------------------~~~a~~~Ga~V~~~~~~~~~g~i~~~ 228 (603)
..+.+++|++++|. ++.++|...+.+...+ ...++..|+++..++. -+.+
T Consensus 93 ~~~Le~~la~~~g~-~~~i~~~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~------~d~~ 165 (410)
T PRK13392 93 HVLLERELADLHGK-ESALLFTSGYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH------NDLA 165 (410)
T ss_pred HHHHHHHHHHHhCC-CCEEEECcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC------CCHH
Confidence 45788999999995 5667665433222222 2223344555544432 1455
Q ss_pred HHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCC--------CCCCCCCCcE
Q 007454 229 KLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDS--------FGLSLVRPDF 299 (603)
Q Consensus 229 ~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~--------ldls~~~~Df 299 (603)
++++.+... ..+++++|++...+|.||.+.|++.+ ++|+++|+++++|.++..+. +.+ .++. -++|+
T Consensus 166 ~l~~~l~~~--~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~-~g~~g~g~~~~~~~~-~~~di 241 (410)
T PRK13392 166 DLEEQLASV--DPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGL-YGARGGGIAERDGLM-DRIDM 241 (410)
T ss_pred HHHHHHHhc--cCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccC-cCCCCCchhhhccCC-CCCcE
Confidence 677766531 12468999999999999999999866 58999999999999987432 001 1111 25799
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhh
Q 007454 300 LICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGP 379 (603)
Q Consensus 300 lv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi 379 (603)
++.|+.|.||. + | |++..+++.++.++... .+ | . + ..+.+....
T Consensus 242 v~~tlsK~~g~-~-G-G~~~~~~~~~~~l~~~~-~~-----------~------------------~--~-s~~~~~~~~ 285 (410)
T PRK13392 242 IQGTLAKAFGC-L-G-GYIAASADLIDFVRSFA-PG-----------F------------------I--F-TTALPPAVA 285 (410)
T ss_pred EEEEChHhhhc-c-c-chhhcCHHHHHHHHHhC-cc-----------h------------------h--c-cCcCCHHHH
Confidence 99999999995 3 5 66655555443222100 00 0 0 0 111122222
Q ss_pred hhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 007454 380 MSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPN 459 (603)
Q Consensus 380 ~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~ 459 (603)
++.. ++|+.+...+ ...++.+..++++.+.|.++
T Consensus 286 ~a~~----------------------------------------aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~---- 319 (410)
T PRK13392 286 AGAT----------------------------------------AAIRHLKTSQ--TERDAHQDRVAALKAKLNAN---- 319 (410)
T ss_pred HHHH----------------------------------------HHHHHHhcCH--HHHHHHHHHHHHHHHHHHHc----
Confidence 2221 5777665543 34466777888999999875
Q ss_pred CCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccc
Q 007454 460 TEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAK 539 (603)
Q Consensus 460 ~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~ 539 (603)
|. .++. ..++++.+.+.+.. -..++.++|++++||.++.+.. +.
T Consensus 320 --g~---~~~~-----~~~~~~~i~~~~~~---~~~~~~~~L~~~~GI~v~~~~~--p~--------------------- 363 (410)
T PRK13392 320 --GI---PVMP-----SPSHIVPVMVGDPT---LCKAISDRLMSEHGIYIQPINY--PT--------------------- 363 (410)
T ss_pred --CC---CCCC-----CCCCEEEEEeCCHH---HHHHHHHHHHHhCCEEEeeeCC--CC---------------------
Confidence 22 2222 24567666554310 1123455676788999985411 00
Q ss_pred cccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhhhhccccccccc
Q 007454 540 SKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADFVEKARWRYTA 595 (603)
Q Consensus 540 ~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~f~~~~~~~~~~ 595 (603)
...+.+.+|+|++.++|.+|+++|++.|++++++--+ ..||-.|
T Consensus 364 ----------~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~~~--~~~~~~~ 407 (410)
T PRK13392 364 ----------VPRGTERLRITPTPLHDDEDIDALVAALVAIWDRLEL--PRWREAA 407 (410)
T ss_pred ----------CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHcCC--ccchhhh
Confidence 0112258999999999999999999999998765222 5666433
No 93
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.54 E-value=8.7e-13 Score=140.92 Aligned_cols=323 Identities=15% Similarity=0.112 Sum_probs=207.2
Q ss_pred eeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCCC-Cc
Q 007454 111 CLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISE-ND 189 (603)
Q Consensus 111 YLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~~-~e 189 (603)
|+=.+|=+.+|++|++++.+.+...... + ...-...+.+..-.++++++++.+.++|++++ .+
T Consensus 6 ~nF~aGPa~lp~~Vl~~~~~~~~~~~~~------g----------~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~ 69 (364)
T PRK12462 6 LNFSGGPGALPDTVLEQVRQAVVELPET------G----------LSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYG 69 (364)
T ss_pred ceecCCCcCCCHHHHHHHHHHHhccccc------C----------ccccccccccHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence 3334666788999999876433211000 0 00111111123457899999999999999965 35
Q ss_pred EEEeccC----------------c-h---------HHHHHHHHHHcCCEEEEEeccCC---ccccCHHHHHHHHhhcCCC
Q 007454 190 YVYDYES----------------E-A---------VEAMIRTSEKRGARVMSAEFSWP---RLRINSEKLRKMVVSKGKK 240 (603)
Q Consensus 190 ~vf~~es----------------~-s---------V~~~~~~a~~~Ga~V~~~~~~~~---~g~i~~~~L~~~l~~~~~~ 240 (603)
++|..-+ . . -..+.+.+++.| +|..+...|. ...++.+++ ..
T Consensus 70 Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~----~~---- 140 (364)
T PRK12462 70 VVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL----DW---- 140 (364)
T ss_pred EEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh----cc----
Confidence 5553211 0 0 022345566666 5655543221 112333333 11
Q ss_pred CCCeeEEEEeCccccccccccHHHHHHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 007454 241 KKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFV 320 (603)
Q Consensus 241 ~~~t~Lv~~~~~Sn~TG~~~pl~~i~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~v 320 (603)
+++...|.+++..-.||+.+| ...+.+++++++|+++.++. .++|++++ |.+.++..|-+| |.|++++++
T Consensus 141 ~~d~~~v~~t~NETstGv~~~----~~~~~~~~llvvD~sS~~~s--~pid~~~~--dvi~agsQKnlg--P~Gltvviv 210 (364)
T PRK12462 141 DARAPFRHYVSNETVEGLQFP----DAAGLPDSPLIADMSSDFMS--RPFDVEAY--GMVYAHAQKNLG--PAGVTVAII 210 (364)
T ss_pred CCCCcEEEEccCCCCceEecC----cccccCCCeEEEEcCchhhC--CCCChHHc--cEEEeeccccCC--CCceEEEEE
Confidence 235688999999999999997 22233689999999887776 69999987 999999999999 779999999
Q ss_pred eCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhh
Q 007454 321 KKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRR 400 (603)
Q Consensus 321 kk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~ 400 (603)
|+++++..++.. ..+.+ |... .+ .. --.-||++..|+++.
T Consensus 211 s~~al~~~~~~~-p~~ld--------y~~~------~~------~~--s~~nTPpv~~iy~l~----------------- 250 (364)
T PRK12462 211 RRALLERVPDTL-PPMLD--------FRTH------VE------HR--SNYNTPPVFAIYVMA----------------- 250 (364)
T ss_pred CHHHHhhccccC-Cchhh--------HHHH------Hh------cC--CCCCCchHHHHHHHH-----------------
Confidence 999876554321 11110 1000 00 00 012388888888877
Q ss_pred hhhhhhhhhccCCCCCCCchhHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCC-
Q 007454 401 AEADSIQQKNANTNGGGGSEIECRGLDQVDSL--GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDR- 477 (603)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i--Gl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~r- 477 (603)
.+++++.+. |++.+.+|-+.+++.|++.|.++.. + .+++..+..|
T Consensus 251 -----------------------~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~--------~-~~~~~~~~~RS 298 (364)
T PRK12462 251 -----------------------LVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNE--------V-IDCHAHRAARS 298 (364)
T ss_pred -----------------------HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCC--------c-ccCCCChhhcC
Confidence 689988765 9999999999999999999998641 1 1122222334
Q ss_pred CCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEE
Q 007454 478 GPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVV 557 (603)
Q Consensus 478 g~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~V 557 (603)
.=.|.|++.|.. +. ..+.+.+..+||.--- +.+..|.+
T Consensus 299 ~mnv~f~~~~~~---l~-~~f~~~a~~~gl~~lk--------------------------------------Ghr~vgg~ 336 (364)
T PRK12462 299 TMNVAFRFRQPR---LD-TLFKEQSTEAGFCGLS--------------------------------------GHRSIGGI 336 (364)
T ss_pred cceEEEEcCCHH---HH-HHHHHHHHHCCCcccc--------------------------------------CCcccCce
Confidence 457888887632 22 2344455666665221 22335679
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHh
Q 007454 558 TASLGYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 558 R~Slg~~tt~eDVd~l~~~l~~~l~ 582 (603)
|+|+=--.+.|+|++|++|+++|-.
T Consensus 337 Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 337 RASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred EEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999854
No 94
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.50 E-value=3.5e-13 Score=148.36 Aligned_cols=189 Identities=14% Similarity=0.158 Sum_probs=132.3
Q ss_pred CCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCC
Q 007454 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (603)
Q Consensus 107 ~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~ 186 (603)
.+.||++|.|.+++++.+++++.+++.. | +|+......| .....++.+++.+++++|+.
T Consensus 80 tg~v~~tNlg~s~l~~~vieAv~~~~~~--------y------------~~l~~~l~~g-~~g~r~~~le~~lA~l~gae 138 (454)
T TIGR00474 80 TGVVLHTNLGRAPLAEEAIEAVTDAARG--------Y------------SNLEYDLETG-KRGSRYSHVEGLLCELTGAE 138 (454)
T ss_pred CCcEEeccCCCCCCCHHHHHHHHHHHhc--------c------------cchhcccccc-ccchHHHHHHHHHHHHhCCC
Confidence 4579999999999999999998875432 1 2221111111 22355789999999999986
Q ss_pred CCcEEEec-----------------------cCc---hHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCC
Q 007454 187 ENDYVYDY-----------------------ESE---AVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKK 240 (603)
Q Consensus 187 ~~e~vf~~-----------------------es~---sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~ 240 (603)
. .++|.. ++. ....+....++.|++++.++.+ ...+.++++++|..
T Consensus 139 ~-alvv~sg~aAi~l~l~~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~---~~~~l~dle~aI~~---- 210 (454)
T TIGR00474 139 D-ALVVNNNAAAVLLALNTLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT---NRTHLKDYEDAITE---- 210 (454)
T ss_pred c-EEEECCHHHHHHHHHHHhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC---CCCCHHHHHHhcCc----
Confidence 4 344421 110 1111223456679888887642 34578899998863
Q ss_pred CCCeeEEEEeCccccc--c--ccccHHHH-HHHHhCCcEEEEeccc---------cCCCCCCC--CCCCCCCCcEEEEcc
Q 007454 241 KKQRGLFVFPLHSRMT--G--ARYPYLWM-RIAQENDWHILIDACA---------LGPKDMDS--FGLSLVRPDFLICSF 304 (603)
Q Consensus 241 ~~~t~Lv~~~~~Sn~T--G--~~~pl~~i-~~a~e~g~~vlvDAaq---------~~~~~m~~--ldls~~~~Dflv~S~ 304 (603)
+|+++.+.+.||.+ | .+.|++.| ++||++|+.+++|+++ .+++ .| .+..++++|++++|+
T Consensus 211 --~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~--~p~~~~~~~~GaDiv~fSg 286 (454)
T TIGR00474 211 --NTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPD--EPTVQEVIAAGVDLVTFSG 286 (454)
T ss_pred --CCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCC--CcccccHhHcCCCEEEecC
Confidence 69999999999984 7 58899855 5899999999999862 1222 22 245568999999999
Q ss_pred cccCCCCCCceEEEEEeCCCCcCcCC
Q 007454 305 YQIFGENPSGFGCLFVKKSTVPILVD 330 (603)
Q Consensus 305 hK~fG~~P~G~G~L~vkk~~~~~L~p 330 (603)
|||+|+ | ..|++++|++.++.|+.
T Consensus 287 ~K~LgG-p-~~G~i~g~~~~i~~l~~ 310 (454)
T TIGR00474 287 DKLLGG-P-QAGIIVGKKELIERLKK 310 (454)
T ss_pred ccccCC-C-eEEEEEECHHHHHhhhh
Confidence 999986 7 47999999987766653
No 95
>PLN02263 serine decarboxylase
Probab=99.49 E-value=4.9e-11 Score=130.94 Aligned_cols=204 Identities=12% Similarity=0.116 Sum_probs=137.5
Q ss_pred HHHHHHhhccCcCCCCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHH
Q 007454 93 IDQIRAKEYYQLSLSNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLE 172 (603)
Q Consensus 93 vd~iR~~efp~L~~~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~ 172 (603)
++++++.-.|.. ..+|-|-...-+.++.+..+..+..+. -++|.....|+..+.+++
T Consensus 79 l~~~~~~~~~~~----~~~~gYp~n~~~d~s~l~~~l~~~~nN-------------------~Gdp~~~s~~~~~s~~~E 135 (470)
T PLN02263 79 LARYRKTLVERT----KHHLGYPYNLDFDYGALGQLQHFSINN-------------------LGDPFIESNYGVHSRQFE 135 (470)
T ss_pred HHHHHHHHHhcc----cceeCCCCcccCChhhHHHHHHhhccC-------------------CCCccccCCcchhHHHHH
Confidence 355554433433 347777555555566666655432211 022222222333467788
Q ss_pred HHHHHHHHHHcCCCCCcE--EEec------------------------cCchHHHHHHHHHHcCCEEEEEeccCCccccC
Q 007454 173 SAMKKRIMDFLNISENDY--VYDY------------------------ESEAVEAMIRTSEKRGARVMSAEFSWPRLRIN 226 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~--vf~~------------------------es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~ 226 (603)
.++=+.+++++|.+++++ +++. ..+++..+.++++-.|.+++.+|.+ +++++|
T Consensus 136 ~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d-~~g~mD 214 (470)
T PLN02263 136 VGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL-VSGEID 214 (470)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-CCCcCc
Confidence 888888999999877543 1211 1123334455566678899999988 689999
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCc-----EEEEeccccCC-----CCCCCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDW-----HILIDACALGP-----KDMDSFGLSLV 295 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~-----~vlvDAaq~~~-----~~m~~ldls~~ 295 (603)
.++|++.|..++ .++-+|+.++-+-.+|++=|++.|+ +|+++|. ++|||||=.+. ....++|...
T Consensus 215 ~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~- 290 (470)
T PLN02263 215 CADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKK- 290 (470)
T ss_pred HHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCc-
Confidence 999999997532 2467888899999999999999775 7899986 99999973221 1112356654
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEeCCCC
Q 007454 296 RPDFLICSFYQIFGENPSGFGCLFVKKSTV 325 (603)
Q Consensus 296 ~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~ 325 (603)
++|-+++++|||++. |.|.|++++|+...
T Consensus 291 ~vDSIsvD~HK~l~~-P~~cgvll~R~~~~ 319 (470)
T PLN02263 291 PIGSVSVSGHKFVGC-PMPCGVQITRMEHI 319 (470)
T ss_pred CccEEEECCccccCC-CcCEEEEEEehhhH
Confidence 499999999999997 99999999997643
No 96
>PRK05968 hypothetical protein; Provisional
Probab=99.48 E-value=3.1e-12 Score=138.74 Aligned_cols=141 Identities=13% Similarity=0.089 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEeccCchHH-------------------------HHHHHHHHcCCEEEEEeccCCccc
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDYESEAVE-------------------------AMIRTSEKRGARVMSAEFSWPRLR 224 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~-------------------------~~~~~a~~~Ga~V~~~~~~~~~g~ 224 (603)
...++.++++++++|++ ..++|.....++. .+...++..|+++.+++..
T Consensus 63 p~~~~le~~lA~l~g~~-~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~----- 136 (389)
T PRK05968 63 PTVRAFEEMLAKLEGAE-DARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR----- 136 (389)
T ss_pred hhHHHHHHHHHHHhCCC-cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC-----
Confidence 34668888999999985 3454432211111 1223344556666665432
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEc
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICS 303 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S 303 (603)
+.++|++++. +|+||.+...+|.++.+.|++.| ++|+++|+.|++|+++..+....++ .+++|++++|
T Consensus 137 -d~~~l~~~i~-------~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~---~~g~Divv~S 205 (389)
T PRK05968 137 -DEEAVAKALP-------GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPI---TLGVDLVIHS 205 (389)
T ss_pred -CHHHHHHhcc-------cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCch---hcCCcEEEee
Confidence 5677877762 47899999888999999999865 5899999999999998776411233 3578999999
Q ss_pred ccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 304 FYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 304 ~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
++|++++ |.+ .|+++.+++.++.+
T Consensus 206 ~tK~l~g-~~~~~gG~i~~~~~~~~~l 231 (389)
T PRK05968 206 ASKYLGG-HSDTVAGVVAGSKEHIARI 231 (389)
T ss_pred ccccccC-CCCeEEEEEEECHHHHHHH
Confidence 9999886 655 57777666654433
No 97
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.47 E-value=4.5e-12 Score=135.59 Aligned_cols=264 Identities=14% Similarity=0.131 Sum_probs=166.4
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCc-hH---------------------HHHHHHHHHcCCEEEEEeccCCccccCHHHH
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESE-AV---------------------EAMIRTSEKRGARVMSAEFSWPRLRINSEKL 230 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~-sV---------------------~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L 230 (603)
.+.|+.|++++|+++++++++..+. ++ ......++..|+++..++.+ +..++.++|
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~l 147 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAK--DYGHDLDAM 147 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEeccc--CCCCCHHHH
Confidence 4799999999999988887654321 11 11122345678888888763 567899999
Q ss_pred HHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHh--CCcEEEEeccccCCC----CCCCCCCCCCCC-cEEEE
Q 007454 231 RKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQE--NDWHILIDACALGPK----DMDSFGLSLVRP-DFLIC 302 (603)
Q Consensus 231 ~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e--~g~~vlvDAaq~~~~----~m~~ldls~~~~-Dflv~ 302 (603)
++.+.. ++++|.++..+|.||.++|.+.+. +++. +|+++++|.+..... ...++++-.... .+++.
T Consensus 148 ~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (367)
T PRK02731 148 LAAVTP------RTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTR 221 (367)
T ss_pred HHHhCC------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEe
Confidence 988853 578999999999999999998664 5654 489999999743211 001122111122 35566
Q ss_pred cccccCCCCCCc--eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhh
Q 007454 303 SFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPM 380 (603)
Q Consensus 303 S~hK~fG~~P~G--~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~ 380 (603)
|+-|.|| ..| +|.++++++.++.+.... .. +. .+..+..
T Consensus 222 S~SK~~g--~~G~RiG~l~~~~~~~~~l~~~~------------~~----------------------~~---~~~~~~~ 262 (367)
T PRK02731 222 TFSKAYG--LAGLRVGYGIAPPEIIDALNRVR------------QP----------------------FN---VNSLALA 262 (367)
T ss_pred eehHhhc--CcccceeeeeCCHHHHHHHHHcc------------CC----------------------CC---CCHHHHH
Confidence 8889998 336 699998876654443210 00 00 0111111
Q ss_pred hhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 007454 381 SIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPN 459 (603)
Q Consensus 381 gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~h~~ 459 (603)
.+++.++.. .++++.++.+.+.+++.+.|.++
T Consensus 263 -------------------------------------------~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---- 295 (367)
T PRK02731 263 -------------------------------------------AAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL---- 295 (367)
T ss_pred -------------------------------------------HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC----
Confidence 122222211 24666777788888898888764
Q ss_pred CCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccc
Q 007454 460 TEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAK 539 (603)
Q Consensus 460 ~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~ 539 (603)
| +.++ | ..++.+.+.+++. .+...+.+.+.++||.++.|...
T Consensus 296 --g---~~~~-~----~~g~~~~i~~~~~----~~~~~~~~~L~~~gI~v~~~~~~------------------------ 337 (367)
T PRK02731 296 --G---LEYI-P----SVGNFILVDFDDG----KDAAEAYQALLKRGVIVRPVAGY------------------------ 337 (367)
T ss_pred --C---CccC-C----CCceEEEEECCCC----CCHHHHHHHHHHCCEEEEeCCCC------------------------
Confidence 2 3333 2 2477888887431 23334444445689999875221
Q ss_pred cccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 540 SKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 540 ~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+ . .+.||+|++ +.+|+++|+++|++++++
T Consensus 338 ----------~-~-~~~iRis~~---~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 338 ----------G-L-PNALRITIG---TEEENRRFLAALKEFLAA 366 (367)
T ss_pred ----------C-C-CCeEEEecC---CHHHHHHHHHHHHHHHhc
Confidence 0 1 258999986 789999999999998754
No 98
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.47 E-value=1.8e-12 Score=136.56 Aligned_cols=150 Identities=11% Similarity=0.110 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEec-cCchHHHHHH------------------------HHHHcCCEEEEEeccCCccc
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDY-ESEAVEAMIR------------------------TSEKRGARVMSAEFSWPRLR 224 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~-es~sV~~~~~------------------------~a~~~Ga~V~~~~~~~~~g~ 224 (603)
...++.++.+++++| ++++++.. .++++..++. .++..|+++..++.+ .+.
T Consensus 32 ~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~ 107 (338)
T cd06502 32 PTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGE--NGK 107 (338)
T ss_pred HHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCCcHHHHcCceEEeecCC--CCc
Confidence 346688899999999 44554432 1122111111 122357777777764 356
Q ss_pred cCHHHHHHHHhhcCCC-CCCeeEEEEeCccccccccccHH---HH-HHHHhCCcEEEEecccc------CCCCCCCCCCC
Q 007454 225 INSEKLRKMVVSKGKK-KKQRGLFVFPLHSRMTGARYPYL---WM-RIAQENDWHILIDACAL------GPKDMDSFGLS 293 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~-~~~t~Lv~~~~~Sn~TG~~~pl~---~i-~~a~e~g~~vlvDAaq~------~~~~m~~ldls 293 (603)
++.++|++++....++ .++++++.+...+|. |..+|.. .+ ++|+++|+++++|++.. .+. +++.-
T Consensus 108 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~---~~~~~ 183 (338)
T cd06502 108 LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGV---ALKTY 183 (338)
T ss_pred CCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC---CHHHH
Confidence 8999999998642111 136899999999985 7665654 33 46889999999998642 222 22211
Q ss_pred CCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcC
Q 007454 294 LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 294 ~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~ 329 (603)
..++|++++|+||+||. | |-++++.+++.++.++
T Consensus 184 ~~~~d~~~~s~sK~~~~-~-~g~~~~~~~~~~~~~~ 217 (338)
T cd06502 184 KSGVDSVSFCLSKGGGA-P-VGAVVVGNRDFIARAR 217 (338)
T ss_pred HhcCCEEEEeccccCCC-c-cceEEECCHHHHHHHH
Confidence 24789999999999995 5 4334455666554443
No 99
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.47 E-value=1.7e-11 Score=132.64 Aligned_cols=192 Identities=12% Similarity=0.065 Sum_probs=123.1
Q ss_pred CCceeeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCC
Q 007454 107 SNHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI 185 (603)
Q Consensus 107 ~~~vYLDyaa~t-l~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna 185 (603)
.+.++|+-+... ++++.+.+++.+++...... .+..+ .-..++.+.+++.+++++|+
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~---------------~Y~~~-------~G~~~lr~~~~~~l~~~~g~ 84 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLANPENH---------------KYQAV-------QGIPPLLEAITQKLQQDNGI 84 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCC---------------CCCCC-------CCCHHHHHHHHHHHHHHhCC
Confidence 356888866655 46777888876543211000 00000 11235678889999999997
Q ss_pred C---CCcEEEeccCc-hHHH---------------------HHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCC
Q 007454 186 S---ENDYVYDYESE-AVEA---------------------MIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKK 240 (603)
Q Consensus 186 ~---~~e~vf~~es~-sV~~---------------------~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~ 240 (603)
. +++++++..+. ++.. ....++..|++++.++.+ .+..++.++|++.+..
T Consensus 85 ~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~---- 159 (389)
T PRK05957 85 ELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD-DNYQLQPEAIEQAITP---- 159 (389)
T ss_pred CCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC-CCCCcCHHHHHHhcCc----
Confidence 4 56777654321 1111 122345678888888876 4567999999998863
Q ss_pred CCCeeEEEEeCcccccccccc---HH-HHHHHHhCCcEEEEecccc----CCCCCCC-CCC-CCCCCcEEEEcccccCCC
Q 007454 241 KKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACAL----GPKDMDS-FGL-SLVRPDFLICSFYQIFGE 310 (603)
Q Consensus 241 ~~~t~Lv~~~~~Sn~TG~~~p---l~-~i~~a~e~g~~vlvDAaq~----~~~~m~~-ldl-s~~~~Dflv~S~hK~fG~ 310 (603)
+++++++++.+|.||.++| ++ ++++|+++|+++++|.+-. .+..+.+ ..+ ....--+++.|+-|.||
T Consensus 160 --~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g- 236 (389)
T PRK05957 160 --KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYG- 236 (389)
T ss_pred --CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhcc-
Confidence 5899999999999999999 54 3467899999999999721 1110011 111 11123477888999999
Q ss_pred CCCc--eEEEEEeCCCCcCcC
Q 007454 311 NPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 311 ~P~G--~G~L~vkk~~~~~L~ 329 (603)
+.| +|++++.+++++.+.
T Consensus 237 -~~GlRiG~~~~~~~~~~~~~ 256 (389)
T PRK05957 237 -FASWRIGYMVIPIHLLEAIK 256 (389)
T ss_pred -CccceeEEEecCHHHHHHHH
Confidence 558 999998776654443
No 100
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.46 E-value=1.4e-11 Score=132.29 Aligned_cols=246 Identities=14% Similarity=0.127 Sum_probs=151.2
Q ss_pred HHHHHcCCEEEEEeccCC--ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEE
Q 007454 204 RTSEKRGARVMSAEFSWP--RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILI 277 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~~--~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlv 277 (603)
..++..|+++..++.+.. +..++.++|++.+.. ++++++++..+|.||.++|.+. +++|+++|+++++
T Consensus 123 ~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~ 196 (382)
T PRK06108 123 AAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP------RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVA 196 (382)
T ss_pred HHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEE
Confidence 345667899998888642 235889999888753 5788999999999999998752 3467899999999
Q ss_pred eccccCC-----CCCC-CCCCCC-CCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceecccccccccccc
Q 007454 278 DACALGP-----KDMD-SFGLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTD 350 (603)
Q Consensus 278 DAaq~~~-----~~m~-~ldls~-~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~ 350 (603)
|.+.... .... .+++.. ....+++.|++|.||.+...+|++++++++++.+..... +
T Consensus 197 De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~-------------~--- 260 (382)
T PRK06108 197 DEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIE-------------Y--- 260 (382)
T ss_pred ehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHH-------------h---
Confidence 9863321 1000 123322 234588999999998322237999987766544432100 0
Q ss_pred ccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHH
Q 007454 351 EFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVD 430 (603)
Q Consensus 351 ~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~ 430 (603)
.-.+++.+...++. .+++...
T Consensus 261 ------------------~~~~~~~~~q~a~~-----------------------------------------~~l~~~~ 281 (382)
T PRK06108 261 ------------------NTSCVAQFVQRAAV-----------------------------------------AALDEGE 281 (382)
T ss_pred ------------------cccCCChHHHHHHH-----------------------------------------HHHhCCh
Confidence 00111111111111 1222110
Q ss_pred hcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEe
Q 007454 431 SLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLS 510 (603)
Q Consensus 431 ~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr 510 (603)
. -++.+.++.+.++++|++.|.++. .++++.|. -+..+-+.+++.. -..+++.+|++++||.++
T Consensus 282 ~-~~~~~~~~~~~~~~~l~~~L~~~~--------~~~~~~p~----~g~~~~~~l~~~~---~~~~~~~~ll~~~gV~v~ 345 (382)
T PRK06108 282 D-FVAELVARLRRSRDHLVDALRALP--------GVEVAKPD----GAMYAFFRIPGVT---DSLALAKRLVDEAGLGLA 345 (382)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhCC--------CCcccCCC----eeEEEEEeCCCCC---CHHHHHHHHHHhCCEEEe
Confidence 0 135667778888899999997652 25555442 2334455555421 122455667788999998
Q ss_pred eCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 007454 511 YGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 511 ~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~ 582 (603)
.|..+.. .+.+.||+|++. +.++++..++.|++++.
T Consensus 346 pg~~f~~----------------------------------~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 346 PGTAFGP----------------------------------GGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred CchhhCC----------------------------------CCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 7743311 113689999998 89999999999988764
No 101
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.46 E-value=2.1e-11 Score=130.12 Aligned_cols=302 Identities=13% Similarity=0.113 Sum_probs=187.0
Q ss_pred CCceeeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCC
Q 007454 107 SNHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI 185 (603)
Q Consensus 107 ~~~vYLDyaa~t-l~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna 185 (603)
.+.++||.+... ++|+.+++++.+.+... ....|.. . -..+.|+.|++++|+
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~Y~~-~--~~~~lr~~ia~~~~~ 78 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEV------------------------ALNRYPD-P--RAAALKAALRAAMGV 78 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhcc------------------------ccccCCC-C--CHHHHHHHHHHHhCc
Confidence 357889877766 46778888876543210 0000110 0 124789999999998
Q ss_pred CCC-cEEEeccC----------------------chHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCC
Q 007454 186 SEN-DYVYDYES----------------------EAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKK 242 (603)
Q Consensus 186 ~~~-e~vf~~es----------------------~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~ 242 (603)
+++ +++++..+ .+-......++..|+++..++++ +++.++.++|++.+.. .
T Consensus 79 ~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~-~~~~~d~~~l~~~~~~-----~ 152 (356)
T PRK04870 79 PAGADVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT-ADFTLDLPAMLAAIAE-----H 152 (356)
T ss_pred CCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC-CCCCCCHHHHHHHhhc-----C
Confidence 764 67654322 12222345567789999999987 4678999999998863 2
Q ss_pred CeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccc--cCCCCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEE
Q 007454 243 QRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACA--LGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGC 317 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq--~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~ 317 (603)
+++++.++.-+|.||..+|.+.+. +++..+.++++|.+. +......+ .+....--+++.|+-| || ..| +|.
T Consensus 153 ~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~vi~~~S~SK-~~--~~GlRiG~ 228 (356)
T PRK04870 153 RPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLP-RLARFPNLLVMRTVSK-LG--LAGLRLGY 228 (356)
T ss_pred CCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHH-HHhhCCCEEEEecchh-hh--hHHHhhhh
Confidence 578898898999999999998664 555547789999863 22211001 1223333578999999 88 447 898
Q ss_pred EEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHH
Q 007454 318 LFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISE 397 (603)
Q Consensus 318 L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~ 397 (603)
++.+++.++.+..... ..+.+..+..+..
T Consensus 229 ~i~~~~~i~~~~~~~~-------------------------------------~~~~~~~~q~~a~-------------- 257 (356)
T PRK04870 229 LAGHPAWIAELDKVRP-------------------------------------PYNVNVLTQATAL-------------- 257 (356)
T ss_pred hhCCHHHHHHHHHccC-------------------------------------CCcCCHHHHHHHH--------------
Confidence 8877655443331100 0011111111100
Q ss_pred HhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCC
Q 007454 398 VRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDR 477 (603)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~r 477 (603)
.+++... -+++..++.+..++++.+.|.++. | +.++ | ..
T Consensus 258 --------------------------~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~~-----~---~~~~-~----~~ 296 (356)
T PRK04870 258 --------------------------FALEHVD--VLDAQAAQLRAERTRLAAALAALP-----G---VTVF-P----SA 296 (356)
T ss_pred --------------------------HHHhCHH--HHHHHHHHHHHHHHHHHHHHHhCC-----C---cEEC-C----CC
Confidence 2332211 145556667778888888888752 2 4443 2 23
Q ss_pred CCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEE
Q 007454 478 GPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVV 557 (603)
Q Consensus 478 g~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~V 557 (603)
+..+.+.+++ ...+.+++.++||.|+.|.... ....+.+
T Consensus 297 ~~~~~~~~~~-------~~~~~~~l~~~gI~v~~~~~f~----------------------------------~~~~~~i 335 (356)
T PRK04870 297 ANFILVRVPD-------AAAVFDGLKTRGVLVKNLSGMH----------------------------------PLLANCL 335 (356)
T ss_pred CeEEEEECCC-------HHHHHHHHHHCCEEEEECCCCC----------------------------------CCCCCeE
Confidence 5667776652 2345566788999998763220 0112689
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHH
Q 007454 558 TASLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 558 R~Slg~~tt~eDVd~l~~~l~~~l 581 (603)
|+|++ +.+|+++|+++|+++|
T Consensus 336 Ris~~---~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 336 RVTVG---TPEENAQFLAALKAAL 356 (356)
T ss_pred EEeCC---CHHHHHHHHHHHHHhC
Confidence 99998 7999999999998764
No 102
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.44 E-value=2.6e-11 Score=133.30 Aligned_cols=140 Identities=14% Similarity=0.161 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEec------------------------cCchH-HHHHHHHHHcCCEEEEEeccCCc
Q 007454 168 ESGLESAMKKRIMDFLNISENDYVYDY------------------------ESEAV-EAMIRTSEKRGARVMSAEFSWPR 222 (603)
Q Consensus 168 ~~~~~~~aR~~Ia~~lna~~~e~vf~~------------------------es~sV-~~~~~~a~~~Ga~V~~~~~~~~~ 222 (603)
.....+..++++++++|+ +..++|.. ++.++ ..+...+++.|++|.+++. +.
T Consensus 67 ~~pt~~~le~~la~l~g~-~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~--~~ 143 (437)
T PRK05613 67 TNPTVEALENRIASLEGG-VHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVEN--PD 143 (437)
T ss_pred cChHHHHHHHHHHHHhCC-CeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECC--CC
Confidence 334567888899999987 35555431 22222 2223455678989888872 11
Q ss_pred cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEE
Q 007454 223 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLI 301 (603)
Q Consensus 223 g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv 301 (603)
+.++|++.|.+ +|+++.+-+.+|.+|.++|++.| ++|+++|+.|++|++|..|.. .+.-.+++|+++
T Consensus 144 ---d~e~l~~~l~~------~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~---~~p~~~GaDivv 211 (437)
T PRK05613 144 ---DPESWQAAVQP------NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL---VRPLELGADVVV 211 (437)
T ss_pred ---CHHHHHHhCCc------cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc---cChHHhCCCEEE
Confidence 67888888863 58888888999999999999966 589999999999999988862 333357899999
Q ss_pred EcccccCCCCCCceEEEEEeC
Q 007454 302 CSFYQIFGENPSGFGCLFVKK 322 (603)
Q Consensus 302 ~S~hK~fG~~P~G~G~L~vkk 322 (603)
+|+||++|++-.|+|.+++.+
T Consensus 212 ~S~~K~l~G~gd~~gG~vv~~ 232 (437)
T PRK05613 212 ASLTKFYTGNGSGLGGVLIDG 232 (437)
T ss_pred eeccceecCCCcceeEEEEec
Confidence 999999993213568888743
No 103
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.44 E-value=1.2e-11 Score=133.06 Aligned_cols=293 Identities=14% Similarity=0.120 Sum_probs=189.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCC-cEEEecc---------------Cc----------hHHHHHHHHHHcCC-EEEEEecc
Q 007454 167 QESGLESAMKKRIMDFLNISEN-DYVYDYE---------------SE----------AVEAMIRTSEKRGA-RVMSAEFS 219 (603)
Q Consensus 167 ~~~~~~~~aR~~Ia~~lna~~~-e~vf~~e---------------s~----------sV~~~~~~a~~~Ga-~V~~~~~~ 219 (603)
...+++.++++.+.++|+++.+ ++++-.- .. +-.|+.+.+++.|. +|..+.++
T Consensus 36 ~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g~FG~r~~~eia~~~g~~~v~~l~~~ 115 (374)
T TIGR01365 36 LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWESFGKGWVTDVTKQLKLPDVRVLEAE 115 (374)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEECHHHHHHHHHHHHhcCCCCcEEEcCC
Confidence 3578999999999999998433 3333110 00 12233388888999 58888888
Q ss_pred CCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHHHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcE
Q 007454 220 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDF 299 (603)
Q Consensus 220 ~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Df 299 (603)
| .-.++.++++. . +. |++.|.--.||+.+|++.+.... +++.++|||++.+|- .+++++. +|+
T Consensus 116 ~-g~~~~~~~ve~---~-----~~---v~~vhnETSTGv~npv~~i~~~~-~~~lliVDavSs~g~--~~l~~d~--iDv 178 (374)
T TIGR01365 116 Y-GKLPDLKKVDF---K-----ND---VVFTWNGTTSGVRVPNGDFIPAD-REGLTICDATSAAFA--QDLDYHK--LDV 178 (374)
T ss_pred C-CCCCCHHHcCC---C-----CC---EEEecCCCchheecccccccccc-CCCcEEEEccchhcC--CCCChhH--CcE
Confidence 7 45567777762 1 12 56888888999999997443221 589999999888877 6899984 999
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCCcCcCC--CCCC--CceeccccccccccccccCCCCCCcccCcccccccccCCCC
Q 007454 300 LICSFYQIFGENPSGFGCLFVKKSTVPILVD--NTSS--GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 375 (603)
Q Consensus 300 lv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p--~~~g--G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n 375 (603)
+++|..|.+|. |.|++++++++.+++..+. .++. ....+... ..++ . .+ ....|++
T Consensus 179 ~~tgsQK~L~~-ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~-~~~~-~------~~-----------~~~~t~~ 238 (374)
T TIGR01365 179 VTFSWQKVLGG-EGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKG-GKLN-K------KI-----------FEGSTIN 238 (374)
T ss_pred EEEechhccCC-CCceEEEEECHHHHHHHhhcCCCCCChhhhccccc-cchh-h------hh-----------hcCCCCC
Confidence 99999999987 7899999999998755431 1111 11000000 0000 0 00 0123555
Q ss_pred hhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhc
Q 007454 376 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMK 454 (603)
Q Consensus 376 ~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~ 454 (603)
.+.+.++- ++. .+|+.+.+. |++...+|-+.+.+.+++.|.+
T Consensus 239 TP~v~~l~-------------a~~------------------------~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~ 281 (374)
T TIGR01365 239 TPSMLCVE-------------DWL------------------------DALKWAESIGGLKPLIARADDNLAVLEAFVAK 281 (374)
T ss_pred ChHHHHHH-------------HHH------------------------HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence 55554442 122 577777676 8999999999999999999998
Q ss_pred CCCCCCCCCceEEEeCCCCCCCCC-CEEEEEEccCCCCcc--C-----HHHHHHHHhcCCcEEeeCcccCccCCchhhhh
Q 007454 455 LQHPNTEGNALVKIYGPKIRFDRG-PALAFNVFDWKREKI--E-----PVLVQKLADRENISLSYGSLHHIWFSDKYQKE 526 (603)
Q Consensus 455 L~h~~~~g~plv~Iygp~~~~~rg-~ivsFnv~~~~g~~v--~-----~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~ 526 (603)
+. ...++... +..|. .++++.+++..-..+ + ...+.+.+.++||.+..|...
T Consensus 282 lg--------~l~~~~~~-~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~----------- 341 (374)
T TIGR01365 282 NN--------WIHFLAET-PEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYR----------- 341 (374)
T ss_pred CC--------CcccCCCC-hhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccc-----------
Confidence 73 13344421 12344 456677744210000 1 245666666779998766211
Q ss_pred hHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 007454 527 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 578 (603)
Q Consensus 527 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~ 578 (603)
.. ...+||.---.-+.+||++|+++|.
T Consensus 342 ------------------------~~-~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 342 ------------------------DA-PSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred ------------------------cC-CCceEEecCCcCCHHHHHHHHHHHH
Confidence 11 1478998888899999999998874
No 104
>PRK09105 putative aminotransferase; Provisional
Probab=99.44 E-value=2.4e-11 Score=130.82 Aligned_cols=183 Identities=15% Similarity=0.134 Sum_probs=122.6
Q ss_pred CCceeeecCCCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCC
Q 007454 107 SNHTCLDYFGIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI 185 (603)
Q Consensus 107 ~~~vYLDyaa~tl-~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna 185 (603)
++.+|||.+...+ +|+.+++++.+.... . + .|+. . . ..+.|+.|++++|+
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~---------------------~---~--~Y~~-~-~-~~~Lr~aia~~~~v 93 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAAL---------------------S---G--RYDL-E-L-EDDLRTLFAAQEGL 93 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHH---------------------h---c--CCCC-c-h-HHHHHHHHHHHhCc
Confidence 5679999998764 577888887543210 0 0 0111 1 1 56799999999999
Q ss_pred CCCcEEEeccCc----------------------hHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCC
Q 007454 186 SENDYVYDYESE----------------------AVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQ 243 (603)
Q Consensus 186 ~~~e~vf~~es~----------------------sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~ 243 (603)
++++++++..+. .-......++..|+++..++.+ +++.++.++|++. . ++
T Consensus 94 ~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~-~------~~ 165 (370)
T PRK09105 94 PADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLR-ADGAHDVKAMLAA-D------PN 165 (370)
T ss_pred ChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCC-CCCCCCHHHHHhc-C------CC
Confidence 999997753221 1122334566789999888876 3566888888765 2 25
Q ss_pred eeEEEEeCccccccccccHHHHH-HHH--hCCcEEEEeccc--cCCCCCCCCCCCCCCCcEEE-EcccccCCCCCCc--e
Q 007454 244 RGLFVFPLHSRMTGARYPYLWMR-IAQ--ENDWHILIDACA--LGPKDMDSFGLSLVRPDFLI-CSFYQIFGENPSG--F 315 (603)
Q Consensus 244 t~Lv~~~~~Sn~TG~~~pl~~i~-~a~--e~g~~vlvDAaq--~~~~~m~~ldls~~~~Dflv-~S~hK~fG~~P~G--~ 315 (603)
++++.++.-+|.||..+|.+.+. +++ +++.++++|.+. +.+.. ..+++...+.++++ .|+-|.|| ..| +
T Consensus 166 ~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~-s~~~~~~~~~~vi~~~SfSK~~g--~~GlRi 242 (370)
T PRK09105 166 AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAP-SVVDLVAQRKDLIVLRTFSKLYG--MAGMRL 242 (370)
T ss_pred CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCc-chHHHHhhCCCEEEEecccHhhc--CCccce
Confidence 78999999999999999998664 433 358999999874 22210 12344344567555 58889999 558 9
Q ss_pred EEEEEeCCCCcCcC
Q 007454 316 GCLFVKKSTVPILV 329 (603)
Q Consensus 316 G~L~vkk~~~~~L~ 329 (603)
|+++..+++++.+.
T Consensus 243 G~~v~~~~~i~~l~ 256 (370)
T PRK09105 243 GLAAARPDLLAKLA 256 (370)
T ss_pred eeeecCHHHHHHHH
Confidence 99998776654443
No 105
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.44 E-value=2.6e-11 Score=128.93 Aligned_cols=180 Identities=16% Similarity=0.148 Sum_probs=117.0
Q ss_pred CCceeeecCCCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCC
Q 007454 107 SNHTCLDYFGIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNI 185 (603)
Q Consensus 107 ~~~vYLDyaa~tl-~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna 185 (603)
++.++|+.+...+ +++.+.+++.+.+... . ..|... -..+.|+.|++++|+
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~----------------------~---~~y~~~---~~~~lr~aia~~~~~ 75 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDD----------------------L---RLYPDP---NADALRQAIAAYYGL 75 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhh----------------------h---hcCCCC---cHHHHHHHHHHHhCC
Confidence 4678999877765 3667777776532210 0 001100 125899999999999
Q ss_pred CCCcEEEeccCc-h---------------------HHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCC
Q 007454 186 SENDYVYDYESE-A---------------------VEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQ 243 (603)
Q Consensus 186 ~~~e~vf~~es~-s---------------------V~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~ 243 (603)
++++++++..+. + -......++..|+++..++++ +++.++.++|++ .
T Consensus 76 ~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~----------~ 144 (353)
T PRK05387 76 DPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD-DDFSIDVEDYLR----------P 144 (353)
T ss_pred CHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC-CCCCCCHHHHHh----------c
Confidence 999997764321 1 112234456679999988886 356788887752 2
Q ss_pred eeEEEEeCccccccccccHHHH-HHHHhC-CcEEEEeccc--cCCCCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEE
Q 007454 244 RGLFVFPLHSRMTGARYPYLWM-RIAQEN-DWHILIDACA--LGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGC 317 (603)
Q Consensus 244 t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~-g~~vlvDAaq--~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~ 317 (603)
+++++++.-+|.||.++|.+.+ ++++.. ++++++|-+- +.+..+.++ ++...-.+++.|+.|.||. .| +|.
T Consensus 145 ~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~--~GlR~G~ 221 (353)
T PRK05387 145 NGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPL-IDRYPNLLVVQTFSKSRSL--AGLRVGF 221 (353)
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHH-HhhCCCEEEEEehhHhhcc--hhhhcee
Confidence 4678888999999999999855 466554 9999999752 222210111 1223457999999999984 36 888
Q ss_pred EEEeCCCCcCc
Q 007454 318 LFVKKSTVPIL 328 (603)
Q Consensus 318 L~vkk~~~~~L 328 (603)
++..++.++.+
T Consensus 222 ~~~~~~~~~~l 232 (353)
T PRK05387 222 AIGHPELIEAL 232 (353)
T ss_pred eecCHHHHHHH
Confidence 88766554433
No 106
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.42 E-value=1.4e-12 Score=135.85 Aligned_cols=146 Identities=12% Similarity=0.083 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEecc----------------------CchHHHHHHHHHHcCCEEEEEeccCCc----
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDYE----------------------SEAVEAMIRTSEKRGARVMSAEFSWPR---- 222 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~e----------------------s~sV~~~~~~a~~~Ga~V~~~~~~~~~---- 222 (603)
...+.++++++++++|++. -++++.. .++...+.......|+++.+++.++..
T Consensus 58 ~g~i~~~~~~~A~~~ga~~-~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~ 136 (294)
T cd00615 58 TGPIKEAQELAARAFGAKH-TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGI 136 (294)
T ss_pred ChHHHHHHHHHHHHhCCCC-EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCc
Confidence 3568899999999999853 2322211 112222333445578888888775422
Q ss_pred -cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccC-----CCCCCCCCCCCC
Q 007454 223 -LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALG-----PKDMDSFGLSLV 295 (603)
Q Consensus 223 -g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~-----~~~m~~ldls~~ 295 (603)
+.++.++|++.|... +++++++++.. |.+|..+|++.| ++|+++|+++++|+++.. +. .+.+....
T Consensus 137 ~~~i~~~~l~~~l~~~----~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~--~~~~~~~~ 209 (294)
T cd00615 137 AGGIPPETFKKALIEH----PDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPI--LPSSAAMA 209 (294)
T ss_pred CCCCCHHHHHHHHHhC----CCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcc--cCcchhhc
Confidence 468999999999641 35788888864 789999999866 589999999999998764 32 35555567
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEeCC
Q 007454 296 RPDFLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 296 ~~Dflv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
++|+++.|+||++++ |++.|+|++++.
T Consensus 210 ~~div~~S~hK~l~g-~~~~~~l~~~~~ 236 (294)
T cd00615 210 GADIVVQSTHKTLPA-LTQGSMIHVKGD 236 (294)
T ss_pred CCcEEEEchhcccch-HhHHHHHHhCCC
Confidence 899999999999886 888899988776
No 107
>PRK04311 selenocysteine synthase; Provisional
Probab=99.42 E-value=3.2e-12 Score=141.09 Aligned_cols=187 Identities=16% Similarity=0.212 Sum_probs=129.8
Q ss_pred CCceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCC
Q 007454 107 SNHTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (603)
Q Consensus 107 ~~~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~ 186 (603)
.+.||+++.|.+++++++++++.+++.. | .|+......| .....++.+++.+++++|+.
T Consensus 85 tg~v~~tNlg~s~l~~~v~eav~~~~~~--------~------------~~le~~l~~g-~~g~r~~~~e~~lA~l~Gae 143 (464)
T PRK04311 85 TGVVLHTNLGRALLSEAAIEAVTEAARG--------Y------------SNLEYDLATG-KRGSRDRALAALLCALTGAE 143 (464)
T ss_pred CccEEeccCCCCCCCHHHHHHHHHHHhc--------c------------cccccchhhc-ccchHHHHHHHHHHHHhCCC
Confidence 4679999999999999999998775431 1 1221111111 23456789999999999985
Q ss_pred CCcEEEec-----------------------cCch---HHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCC
Q 007454 187 ENDYVYDY-----------------------ESEA---VEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKK 240 (603)
Q Consensus 187 ~~e~vf~~-----------------------es~s---V~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~ 240 (603)
. -++|.. ++.. ...+....++.|++++.++.+ ...+.+++++.|..
T Consensus 144 ~-a~vv~sgtaAl~l~l~~l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~---~~t~~~dle~aI~~---- 215 (464)
T PRK04311 144 D-ALVVNNNAAAVLLALNALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT---NRTHLRDYEQAINE---- 215 (464)
T ss_pred e-EEEECCHHHHHHHHHHHhCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC---CCCCHHHHHHhcCc----
Confidence 2 333311 1110 111223456678888888653 34678899998863
Q ss_pred CCCeeEEEEeCcccc--cc--ccccHHHH-HHHHhCCcEEEEeccc--------cC-CCCCCCCCCC---CCCCcEEEEc
Q 007454 241 KKQRGLFVFPLHSRM--TG--ARYPYLWM-RIAQENDWHILIDACA--------LG-PKDMDSFGLS---LVRPDFLICS 303 (603)
Q Consensus 241 ~~~t~Lv~~~~~Sn~--TG--~~~pl~~i-~~a~e~g~~vlvDAaq--------~~-~~~m~~ldls---~~~~Dflv~S 303 (603)
+|+++.+.+.||. +| ...|++.| ++||++|+++++|+++ ++ ++ .+ ++. ++++|++++|
T Consensus 216 --~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~--~p-~~~~~l~~GaDiv~fS 290 (464)
T PRK04311 216 --NTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPD--EP-TVQELLAAGVDLVTFS 290 (464)
T ss_pred --cCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCC--CC-chhhHHhcCCcEEEec
Confidence 6899999999996 55 56899855 6899999999999942 11 12 12 333 3799999999
Q ss_pred ccccCCCCCCceEEEEEeCCCCcCcC
Q 007454 304 FYQIFGENPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 304 ~hK~fG~~P~G~G~L~vkk~~~~~L~ 329 (603)
+|||+|+ | ..|++++|++.++.|+
T Consensus 291 g~K~LgG-p-~~G~i~g~~~li~~l~ 314 (464)
T PRK04311 291 GDKLLGG-P-QAGIIVGKKELIARLK 314 (464)
T ss_pred CcccccC-C-ceEEEEEcHHHHHHHh
Confidence 9999986 6 5899999998876665
No 108
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.41 E-value=2.4e-11 Score=131.67 Aligned_cols=131 Identities=12% Similarity=0.037 Sum_probs=97.4
Q ss_pred HHHHHHcCCCCCcEEEe-ccCchHHHH-HHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccc
Q 007454 177 KRIMDFLNISENDYVYD-YESEAVEAM-IRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSR 254 (603)
Q Consensus 177 ~~Ia~~lna~~~e~vf~-~es~sV~~~-~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn 254 (603)
..+..+++. -++++.. ........+ .+.+++.|.+|.+++.. +.++++++|.. +|+||.+-+.+|
T Consensus 92 ~~~~~ll~~-GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~------d~~~l~~~l~~------~TrlV~~EtpsN 158 (395)
T PRK08114 92 NAILAFVEQ-GDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPL------IGADIAKLIQP------NTKVVFLESPGS 158 (395)
T ss_pred HHHHHHcCC-CCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCC------CHHHHHHhcCC------CceEEEEECCCC
Confidence 344455542 3455543 223233222 34567889999998742 56788888863 689999999999
Q ss_pred cccccccHHHH-HHHHhC--CcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCC--ceEEEEEeCCC
Q 007454 255 MTGARYPYLWM-RIAQEN--DWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPS--GFGCLFVKKST 324 (603)
Q Consensus 255 ~TG~~~pl~~i-~~a~e~--g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~--G~G~L~vkk~~ 324 (603)
++|.+.|++.| ++||++ |+.++||+++..|. . ++..++++|+++.|.||++++ |. +.|+++.+++.
T Consensus 159 p~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~--~-~~pl~~GaDivv~S~tKyl~G-hsdv~~G~v~~~~~~ 229 (395)
T PRK08114 159 ITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGV--L-FKALDFGIDISIQAGTKYLVG-HSDAMIGTAVANARC 229 (395)
T ss_pred CCCEeecHHHHHHHHHHhCCCCEEEEECCCcccc--c-cCHHHcCCcEEEEcCcccccC-CCcceeEEEEcCHHH
Confidence 99999999966 589997 59999999999997 3 888889999999999998776 64 67777665543
No 109
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.41 E-value=4.5e-12 Score=118.64 Aligned_cols=108 Identities=21% Similarity=0.210 Sum_probs=83.9
Q ss_pred HHHHHcCCEEEEEeccCCccccCH--HHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEecc
Q 007454 204 RTSEKRGARVMSAEFSWPRLRINS--EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDAC 280 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~~~g~i~~--~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAa 280 (603)
..++..|+++..++.+. ++.... +++++.+. .++++++.+++.+|.+|..+|++.+ +.|+++|+++++|++
T Consensus 57 ~~~~~~g~~~~~v~~~~-~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a 130 (170)
T cd01494 57 VAAELAGAKPVPVPVDD-AGYGGLDVAILEELKA-----KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAA 130 (170)
T ss_pred hHHHhcCCEEEEeccCC-CCccchhhhhhhhccc-----cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecc
Confidence 44567789999888763 332222 23433222 3578999999999999999999866 579999999999999
Q ss_pred ccCCCCCCCC---CCCCCCCcEEEEcccccCCCCCCceEEEEEe
Q 007454 281 ALGPKDMDSF---GLSLVRPDFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 281 q~~~~~m~~l---dls~~~~Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
+.++. ... +....++|+++.|+||+|| +.|.|+|++|
T Consensus 131 ~~~~~--~~~~~~~~~~~~~d~~~~s~~K~~~--~~~~G~l~~~ 170 (170)
T cd01494 131 SAGGA--SPAPGVLIPEGGADVVTFSLHKNLG--GEGGGVVIVK 170 (170)
T ss_pred ccccc--ccccccccccccCCEEEEEcccccC--CCceEEEEeC
Confidence 98876 343 5777889999999999999 4699999986
No 110
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.40 E-value=3.7e-11 Score=128.43 Aligned_cols=140 Identities=8% Similarity=0.097 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHcCCCCCcEEEeccCc-h-------------------HHHHHHHHHHcCCEEEEEeccCCcc-ccCHHHH
Q 007454 172 ESAMKKRIMDFLNISENDYVYDYESE-A-------------------VEAMIRTSEKRGARVMSAEFSWPRL-RINSEKL 230 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~vf~~es~-s-------------------V~~~~~~a~~~Ga~V~~~~~~~~~g-~i~~~~L 230 (603)
..+.|+.|++++++++++++++..+. + -......++..|+++..++++..++ .++ .++
T Consensus 57 ~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l~~g~viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~ 135 (356)
T PRK08056 57 YRHLHQALARHHQVPASWILAGNGETESIFAVVSGLKPRRAMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAI 135 (356)
T ss_pred HHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhCCCCEEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHH
Confidence 46899999999999999997754321 1 1122345667789998888753222 344 344
Q ss_pred HHHHhhcCCCCCCeeEEEEeCcccccccccc---HH-HHHHHHhCCcEEEEecc--ccCCCC--CCCCCCCCCCCcEEEE
Q 007454 231 RKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDAC--ALGPKD--MDSFGLSLVRPDFLIC 302 (603)
Q Consensus 231 ~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p---l~-~i~~a~e~g~~vlvDAa--q~~~~~--m~~ldls~~~~Dflv~ 302 (603)
.+.+. ++++++.++..+|.||..+| ++ +++.|+++++++++|.+ .+.... ..++ +.....++++.
T Consensus 136 ~~~~~------~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~i~~~ 208 (356)
T PRK08056 136 LEALT------PDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ-LADNPHLWVLR 208 (356)
T ss_pred HHhcc------CCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH-hccCCCEEEEE
Confidence 45453 36889999999999999999 44 33578999999999997 222110 0111 33455779999
Q ss_pred cccccCCCCCCc--eEEEEEe
Q 007454 303 SFYQIFGENPSG--FGCLFVK 321 (603)
Q Consensus 303 S~hK~fG~~P~G--~G~L~vk 321 (603)
|++|+||. .| +|.++..
T Consensus 209 S~SK~~~~--~G~RiG~~v~~ 227 (356)
T PRK08056 209 SLTKFYAI--PGLRLGYLVNS 227 (356)
T ss_pred echhhccC--cchhheeeecC
Confidence 99999993 35 7777653
No 111
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.40 E-value=4.2e-11 Score=129.42 Aligned_cols=285 Identities=12% Similarity=0.038 Sum_probs=165.9
Q ss_pred HHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEecccc
Q 007454 204 RTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACAL 282 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~ 282 (603)
..+...|++++.+++++.++.++.++|+++|.. +|+++... |.+|...|++.| ++|+++|++|++|++|.
T Consensus 88 ~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~------~tkav~~~---~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a 158 (379)
T PRK11658 88 NMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP------RTKAIIPV---HYAGAPADLDAIRAIGERYGIPVIEDAAHA 158 (379)
T ss_pred HHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc------CCeEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECCCc
Confidence 344567999999998865667899999998863 57777633 459999999855 68999999999999998
Q ss_pred CCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEe--CCCCcCcCCCCCCCceeccccccccccccccCCCCCCcc
Q 007454 283 GPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVK--KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPE 360 (603)
Q Consensus 283 ~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vk--k~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~ 360 (603)
.|.......+..++.|+++|+.+|.+.. |-|.+++. ++..+.+++....|.... .... +.... .
T Consensus 159 ~g~~~~~~~~g~~g~~~~Sf~~~K~l~~---g~GG~v~~~~~~~~~~~~~~~~~G~~~~--~~~~-~~~~~-----~--- 224 (379)
T PRK11658 159 VGTYYKGRHIGARGTAIFSFHAIKNITC---AEGGLVVTDDDELADRLRSLKFHGLGVD--AFDR-QTQGR-----A--- 224 (379)
T ss_pred cCCeECCeecCCCCCEEEeCCCCCcCcc---cCceEEEECCHHHHHHHHHHHHcCCCcc--hhhh-hcccC-----C---
Confidence 8762122236667788888888887653 44555554 344444553222232110 0000 00000 0
Q ss_pred cCcccccccccCCC-ChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHH
Q 007454 361 QTSKSKQEKVAATN-TFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISR 439 (603)
Q Consensus 361 ~~~~~~~~~e~GT~-n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~ 439 (603)
..... ++.|+. ++. .+. +|+.+++.-+++.+.+
T Consensus 225 -~~~~~--~~~G~n~~~~---~l~----------------------------------------AAl~~~ql~~l~~~~~ 258 (379)
T PRK11658 225 -PQAEV--LTPGYKYNLA---DIN----------------------------------------AAIALVQLAKLEALNA 258 (379)
T ss_pred -Cccee--eccccccCcC---HHH----------------------------------------HHHHHHHHHHHHHHHH
Confidence 00001 234542 111 111 4666555557899999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCC-CCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCcc
Q 007454 440 RGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDR-GPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIW 518 (603)
Q Consensus 440 r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~r-g~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~ 518 (603)
+-+.+.+++.+.|++++ .+.++.|.....+ ..++.|.+..... .++.+.+.+.+.++||.++ .+|.+.
T Consensus 259 ~r~~~a~~~~~~L~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~L~~~gI~~~--~~~~~~ 327 (379)
T PRK11658 259 RRREIAARYLQALADLP--------FQPLSLPAWPHQHAWHLFIIRVDEERC-GISRDALMEALKERGIGTG--LHFRAA 327 (379)
T ss_pred HHHHHHHHHHHHhcCCC--------CccCcCCCCCCceeEEEEEEEECCccc-cCCHHHHHHHHHHCCCCCc--ccCcCc
Confidence 99999999999998763 2333333321112 2466677753210 1344555555567899755 344332
Q ss_pred CCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 007454 519 FSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 519 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l 581 (603)
...+. ........+ ..+. +......|.+-++..-|.|||+++++.|++++
T Consensus 328 ~~~~~-------~~~~~~~~~--~p~~----~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 328 HTQKY-------YRERFPTLS--LPNT----EWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred ccChh-------hhccCCCCC--ChHH----HHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 11111 110000000 0000 11122578888999999999999999999875
No 112
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.40 E-value=2e-10 Score=124.55 Aligned_cols=318 Identities=14% Similarity=0.126 Sum_probs=190.1
Q ss_pred CCceeeecCC------CCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHH
Q 007454 107 SNHTCLDYFG------IGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (603)
Q Consensus 107 ~~~vYLDyaa------~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia 180 (603)
.+..|+|.++ .+.-++.+++++.+.+.... ...... -..+...+..++++
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-----------------~~~~~~-------~~~~~~~~l~~~l~ 89 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLT-----------------HFSLGF-------FYNEPAVELAELLL 89 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCc-----------------CccCcc-------cCCHHHHHHHHHHH
Confidence 5678999876 33456888888765432110 000000 01355678999999
Q ss_pred HHcCCCCCcEEEecc-CchHHHHHHHHH--HcCCEEEEEec--------------------------------cCC----
Q 007454 181 DFLNISENDYVYDYE-SEAVEAMIRTSE--KRGARVMSAEF--------------------------------SWP---- 221 (603)
Q Consensus 181 ~~lna~~~e~vf~~e-s~sV~~~~~~a~--~~Ga~V~~~~~--------------------------------~~~---- 221 (603)
++++.++++++|... ++++...+..++ ..|.+|..... +++
T Consensus 90 ~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (413)
T cd00610 90 ALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYR 169 (413)
T ss_pred HhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCcccc
Confidence 999987788877543 344544444443 22344433221 100
Q ss_pred ---ccccCHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccCC-CC--CCCC
Q 007454 222 ---RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALGP-KD--MDSF 290 (603)
Q Consensus 222 ---~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~~-~~--m~~l 290 (603)
....+.++|++.+... +.++++|++....+.+|.+.| ++.+ ++|+++|+++++|-++.+- .. +..+
T Consensus 170 ~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~ 246 (413)
T cd00610 170 PPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAF 246 (413)
T ss_pred chhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhH
Confidence 0112567788877631 135788888889999999988 7655 5799999999999986531 10 0122
Q ss_pred CCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcC--CCCCCCceeccccccccccccccCCCCCCcccCcccccc
Q 007454 291 GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV--DNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQE 368 (603)
Q Consensus 291 dls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~--p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 368 (603)
+.....||++++| |.+|. +-.+|+++.++++++.+. ....++
T Consensus 247 ~~~~~~~d~~t~s--K~l~~-g~~~g~~~~~~~~~~~~~~~~~~~~~--------------------------------- 290 (413)
T cd00610 247 EHFGVEPDIVTLG--KGLGG-GLPLGAVLGREEIMDAFPAGPGLHGG--------------------------------- 290 (413)
T ss_pred hhcCCCCCeEEEc--ccccC-ccccEEEEEcHHHHHhhccCCCCCCC---------------------------------
Confidence 3333468988776 99884 344899999887765541 000000
Q ss_pred cccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 007454 369 KVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWL 448 (603)
Q Consensus 369 ~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L 448 (603)
..+.|..+.++.. ++++.+++ +.+.++++.+.+++
T Consensus 291 --t~~~~~~~~~a~~----------------------------------------a~l~~l~~---~~~~~~~~~~~~~l 325 (413)
T cd00610 291 --TFGGNPLACAAAL----------------------------------------AVLEVLEE---EGLLENAAELGEYL 325 (413)
T ss_pred --CCCcCHHHHHHHH----------------------------------------HHHHHHHh---ccHHHHHHHHHHHH
Confidence 0111222222111 46776654 45678889999999
Q ss_pred HHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCC----ccCHHHHHHHHhcCCcEEeeCcccCccCCchhh
Q 007454 449 VNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKRE----KIEPVLVQKLADRENISLSYGSLHHIWFSDKYQ 524 (603)
Q Consensus 449 ~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~----~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~ 524 (603)
.++|.++... .+.+.- . ..+|+++.+.+.+.... ......+.+.+.++||.++.+.
T Consensus 326 ~~~l~~~~~~----~~~~~~--~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~----------- 385 (413)
T cd00610 326 RERLRELAEK----HPLVGD--V---RGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG----------- 385 (413)
T ss_pred HHHHHHHHhh----CCcEEE--e---ecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC-----------
Confidence 9999876320 111211 0 23688999988763210 0112233344456688775431
Q ss_pred hhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 007454 525 KEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 525 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l 581 (603)
...+|+++++..|.+||+++++.|.+.|
T Consensus 386 -----------------------------~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 386 -----------------------------GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred -----------------------------CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 1479999999999999999999998754
No 113
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.40 E-value=1.7e-10 Score=123.13 Aligned_cols=181 Identities=9% Similarity=0.100 Sum_probs=119.5
Q ss_pred ceeeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCCC
Q 007454 109 HTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNISE 187 (603)
Q Consensus 109 ~vYLDyaa~t-l~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~~ 187 (603)
.+=||.+-.. ++|+.+++++.+++... +. ..|+. ....+.|+.|++++++++
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~---------------------~~---~~y~~---~~~~~lr~~ia~~~~~~~ 76 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKSS---------------------QV---NIYPD---PTAEKLREELARYCSVVP 76 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhcC---------------------cc---cCCCC---ccHHHHHHHHHHHhCCCc
Confidence 3457776666 46788888876643210 00 00110 113578999999999999
Q ss_pred CcEEEeccCc----------------------hHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCee
Q 007454 188 NDYVYDYESE----------------------AVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRG 245 (603)
Q Consensus 188 ~e~vf~~es~----------------------sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~ 245 (603)
++++++..+. .-......++..|+++..++++ +++.++.++|++.+.. .+++
T Consensus 77 ~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~~~~-----~~~k 150 (351)
T PRK14807 77 TNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK-EDYTYDVGSFIKVIEK-----YQPK 150 (351)
T ss_pred ccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC-CCCCCCHHHHHHHhhc-----cCCC
Confidence 9997754321 1122234456789999999887 3567899999998863 2588
Q ss_pred EEEEeCccccccccccHHHH-HHHHhCCcEEEEeccc--cCCCCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEEEEE
Q 007454 246 LFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACA--LGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFV 320 (603)
Q Consensus 246 Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq--~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~L~v 320 (603)
++.++..+|.||..+|.+.+ +++++++..+++|.+. +.+..+.++ +....--+++.|+-|.||. .| +|.++.
T Consensus 151 ~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~-~~~~~~vi~~~S~SK~~~~--~GlRiG~~v~ 227 (351)
T PRK14807 151 LVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDV-INEFENLIVLRTLSKAFGL--AGLRVGYAVA 227 (351)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHH-hhhCCCEEEEecchHhccc--chhceeeeec
Confidence 88899999999999999866 4777777789999875 222211111 1222234788999999993 36 677765
Q ss_pred eCCCC
Q 007454 321 KKSTV 325 (603)
Q Consensus 321 kk~~~ 325 (603)
.++++
T Consensus 228 ~~~~~ 232 (351)
T PRK14807 228 NENIL 232 (351)
T ss_pred CHHHH
Confidence 54443
No 114
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.40 E-value=2.3e-11 Score=129.91 Aligned_cols=145 Identities=10% Similarity=0.177 Sum_probs=98.3
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCc-----------------------hHHHHHHHHHHcCCEEEEEeccCCccccCHHH
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESE-----------------------AVEAMIRTSEKRGARVMSAEFSWPRLRINSEK 229 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~-----------------------sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~ 229 (603)
.+.|++|++++|+++++++++..+. .-......++..|+++..++.+ .++.++.+.
T Consensus 63 ~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~-~~~~~~~~~ 141 (354)
T PRK04635 63 PELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLT-ADYQLPLDY 141 (354)
T ss_pred HHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecC-CCCCCCHHH
Confidence 4789999999999999997753221 1111233456789999999886 356778877
Q ss_pred HHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHh-CCcEEEEeccccC--CCCCCCCCCCCCCCc-EEEEcc
Q 007454 230 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQE-NDWHILIDACALG--PKDMDSFGLSLVRPD-FLICSF 304 (603)
Q Consensus 230 L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e-~g~~vlvDAaq~~--~~~m~~ldls~~~~D-flv~S~ 304 (603)
+++ + ++++++.++.-+|.||.++|.+.+. +++. .+++|++|.+..- +.. ..+++...... +++-||
T Consensus 142 l~~-~-------~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~-s~~~~~~~~~~~iv~~S~ 212 (354)
T PRK04635 142 IEQ-L-------DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEY-SVADLLASYPNLVVLRTL 212 (354)
T ss_pred HHh-c-------cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCc-chHHHHhhCCCEEEEech
Confidence 762 3 2589999999999999999998654 5554 3699999997421 110 01111111111 477799
Q ss_pred cccCCCCCCc--eEEEEEeCCCCcCcC
Q 007454 305 YQIFGENPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 305 hK~fG~~P~G--~G~L~vkk~~~~~L~ 329 (603)
+|+|| +.| +|.++++++.++.+.
T Consensus 213 SK~~~--l~GlRlG~~i~~~~~~~~l~ 237 (354)
T PRK04635 213 SKAFA--LAGARCGFTLANEELIEILM 237 (354)
T ss_pred HHHhh--hhHHHHhhhhCCHHHHHHHH
Confidence 99999 457 699998877655443
No 115
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.39 E-value=4.3e-11 Score=129.24 Aligned_cols=148 Identities=15% Similarity=0.177 Sum_probs=100.6
Q ss_pred HHHHHHHHHHc------CCCCCcEEEeccC-chHHH---------------------HHHHHHHcCCEEEEEeccCC-cc
Q 007454 173 SAMKKRIMDFL------NISENDYVYDYES-EAVEA---------------------MIRTSEKRGARVMSAEFSWP-RL 223 (603)
Q Consensus 173 ~~aR~~Ia~~l------na~~~e~vf~~es-~sV~~---------------------~~~~a~~~Ga~V~~~~~~~~-~g 223 (603)
.+.|+.|++++ ++++++++++... +++.. ....++..|+++..++.++. +.
T Consensus 71 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 150 (393)
T PRK05764 71 PELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGF 150 (393)
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCC
Confidence 46778888876 4677888775432 12211 22345567899998888632 34
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEeccccC----CC---CCCCCCC
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG----PK---DMDSFGL 292 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq~~----~~---~m~~ldl 292 (603)
.++.++|++.+.. ++++++++.-+|.||.++|.+ +++.|+++|+++++|.+... +. .+..+..
T Consensus 151 ~~d~~~l~~~l~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 224 (393)
T PRK05764 151 KLTVEQLEAAITP------KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSP 224 (393)
T ss_pred cCCHHHHHHhhCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCC
Confidence 6788999998853 578999999999999999854 33568999999999976321 11 0111212
Q ss_pred CCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 293 SLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 293 s~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
...+.++++.|+-|.|| +.| +|+++.++++++.+
T Consensus 225 ~~~~~~i~~~s~SK~~~--~~G~RiG~i~~~~~~~~~~ 260 (393)
T PRK05764 225 ELRDRTITVNGFSKAYA--MTGWRLGYAAGPKELIKAM 260 (393)
T ss_pred CCcCCEEEEecCccccc--CccceeEEEecCHHHHHHH
Confidence 23456889999999999 447 78888766554433
No 116
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.39 E-value=1.1e-10 Score=127.18 Aligned_cols=102 Identities=12% Similarity=0.147 Sum_probs=75.3
Q ss_pred HHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCC
Q 007454 207 EKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPK 285 (603)
Q Consensus 207 ~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~ 285 (603)
++.|+++..++ .++.++++++|.+ +|++|.+...+|.||.+.|++.| ++|+++|+.+++|+++..+.
T Consensus 126 ~~~G~~v~~vd------~~d~e~l~~ai~~------~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~ 193 (398)
T PRK07504 126 PRYGIESTLVD------GLDLDNWEKAVRP------NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPL 193 (398)
T ss_pred hhcCeEEEEEC------CCCHHHHHHhcCc------CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccc
Confidence 34566655553 2578888888853 68999999999999999999966 58999999999999987664
Q ss_pred CCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEE-eCC
Q 007454 286 DMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFV-KKS 323 (603)
Q Consensus 286 ~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~v-kk~ 323 (603)
.-.++ .+++|+++.|++|+||++...+|..++ +++
T Consensus 194 ~~~~~---~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~ 229 (398)
T PRK07504 194 FQKPL---ELGAHIVVYSATKHIDGQGRCLGGVVLSDKA 229 (398)
T ss_pred cCCch---hhCCCEEEeeccccccCCccceEEEEEeCcH
Confidence 11222 458999999999999852123654444 443
No 117
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.38 E-value=2.1e-11 Score=131.96 Aligned_cols=144 Identities=13% Similarity=0.204 Sum_probs=98.6
Q ss_pred HHHHHHHHHc------CCCCCcEEEeccCc-hHH---------------------HHHHHHHHcCCEEEEEeccCC-ccc
Q 007454 174 AMKKRIMDFL------NISENDYVYDYESE-AVE---------------------AMIRTSEKRGARVMSAEFSWP-RLR 224 (603)
Q Consensus 174 ~aR~~Ia~~l------na~~~e~vf~~es~-sV~---------------------~~~~~a~~~Ga~V~~~~~~~~-~g~ 224 (603)
+.|+.|++++ ++++++++++..+. ++. .....++..|+++..++++.. +..
T Consensus 74 ~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 153 (391)
T PRK08361 74 ELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQ 153 (391)
T ss_pred HHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCC
Confidence 6777777776 46788887654321 111 123345567888888888632 346
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc---HHHH-HHHHhCCcEEEEecccc--C--CCCCCCC-CCCCC
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YLWM-RIAQENDWHILIDACAL--G--PKDMDSF-GLSLV 295 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p---l~~i-~~a~e~g~~vlvDAaq~--~--~~~m~~l-dls~~ 295 (603)
++.++|++.+.. ++++++++..+|.||..+| ++.+ +.|+++++++++|.+-. . +....++ .+ ..
T Consensus 154 ~d~~~l~~~i~~------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~ 226 (391)
T PRK08361 154 PDPDELLELITK------RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKY-AP 226 (391)
T ss_pred CCHHHHHHhccc------ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhc-CC
Confidence 899999998863 5789999999999999999 4433 56899999999997621 1 1100111 11 12
Q ss_pred CCcEEEEcccccCCCCCCc--eEEEEEeCCCCc
Q 007454 296 RPDFLICSFYQIFGENPSG--FGCLFVKKSTVP 326 (603)
Q Consensus 296 ~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~ 326 (603)
..++++.|+.|.|| ..| +|.+++.++++.
T Consensus 227 ~~~i~~~s~SK~~~--~~GlRiG~~~~~~~~~~ 257 (391)
T PRK08361 227 DNTILANSFSKTFA--MTGWRLGFVIAPEQVIK 257 (391)
T ss_pred CCEEEEecCchhcC--CcHhhhhhhccCHHHHH
Confidence 45789999999999 448 899998766543
No 118
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.37 E-value=2.2e-10 Score=125.99 Aligned_cols=103 Identities=18% Similarity=0.104 Sum_probs=80.9
Q ss_pred HHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCC
Q 007454 206 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGP 284 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~ 284 (603)
+++.|+++..++ +. .+.++++++|. ++|++|.+.+.+|++|.+.|++.| ++||++|+.++||+++..|
T Consensus 129 l~~~Gi~v~~vd-d~----~d~e~l~~ai~------~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~ 197 (436)
T PRK07812 129 LPKLGIEVSFVE-DP----DDLDAWRAAVR------PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATP 197 (436)
T ss_pred hhcCeEEEEEEC-CC----CCHHHHHHhCC------CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccc
Confidence 455677777774 21 26778888775 368999999999999999999966 5899999999999999887
Q ss_pred CCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCC
Q 007454 285 KDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKST 324 (603)
Q Consensus 285 ~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~ 324 (603)
. ..-.+ .+++|+++.|+||++|+ .| +|.+++....
T Consensus 198 ~--~~~pl-~~GaDivv~S~tK~lgg--~G~~i~G~vv~~~~ 234 (436)
T PRK07812 198 Y--LIRPL-EHGADIVVHSATKYLGG--HGTAIAGVIVDGGT 234 (436)
T ss_pred c--cCCch-hcCCCEEEEecccccCC--CCCeEEEEEEcCCc
Confidence 6 22223 57999999999999994 35 8888886543
No 119
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.36 E-value=9.5e-11 Score=126.16 Aligned_cols=143 Identities=15% Similarity=0.128 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEeccCchH-------------------------HHHHHHHHHcCCEEEEEeccCCcc
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDYESEAV-------------------------EAMIRTSEKRGARVMSAEFSWPRL 223 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~es~sV-------------------------~~~~~~a~~~Ga~V~~~~~~~~~g 223 (603)
....++.+++|++++|.. +-++|..-..++ ..+...++..|+++..++.+
T Consensus 39 ~p~~~~le~~la~l~g~~-~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~---- 113 (369)
T cd00614 39 NPTVDALEKKLAALEGGE-AALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD---- 113 (369)
T ss_pred ChhHHHHHHHHHHHHCCC-CEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC----
Confidence 344567788889998863 334332111111 11223344567777766543
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEE
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLIC 302 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~ 302 (603)
+.+++++++.. ++++|.+...+|.+|.+.|++.| ++|+++|+++++|.+...|....++ .+++|+++.
T Consensus 114 --d~~~l~~~i~~------~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~~~~---~~g~Divv~ 182 (369)
T cd00614 114 --DPEALEAAIKP------ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQRPL---ELGADIVVH 182 (369)
T ss_pred --CHHHHHHhcCC------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcCChh---hhCCcEEEe
Confidence 36778887753 68999999999999999999966 5899999999999997776511233 358999999
Q ss_pred cccccCCCCCCc--eEEEEEeC-CCCcCc
Q 007454 303 SFYQIFGENPSG--FGCLFVKK-STVPIL 328 (603)
Q Consensus 303 S~hK~fG~~P~G--~G~L~vkk-~~~~~L 328 (603)
|++|++|+ +.. .|+++.++ +..+.+
T Consensus 183 S~tK~l~g-~~~~~gG~v~~~~~~l~~~l 210 (369)
T cd00614 183 SATKYIGG-HSDVIAGVVVGSGEALIQRL 210 (369)
T ss_pred ccceeccC-CCCceEEEEEeCcHHHHHHH
Confidence 99999984 322 67777766 443333
No 120
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.35 E-value=5e-11 Score=128.31 Aligned_cols=75 Identities=12% Similarity=0.085 Sum_probs=60.7
Q ss_pred CeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEEEE
Q 007454 243 QRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLF 319 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~L~ 319 (603)
+++|+.+...+|.||.+.|++.| ++|+++|+.++||.++..+....+++ +++|+++.|++|++++ |.| +|+++
T Consensus 132 ~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~---~g~Divv~S~sK~l~G-~~g~~~G~v~ 207 (366)
T PRK07582 132 GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLE---LGADLVVASDTKALTG-HSDLLLGYVA 207 (366)
T ss_pred CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchh---cCCcEEEecccccccC-CCCeeEEEEE
Confidence 68999999999999999999966 58999999999999865332114555 4789999999999976 667 47777
Q ss_pred Ee
Q 007454 320 VK 321 (603)
Q Consensus 320 vk 321 (603)
.+
T Consensus 208 ~~ 209 (366)
T PRK07582 208 GR 209 (366)
T ss_pred cC
Confidence 65
No 121
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.35 E-value=4.9e-10 Score=121.74 Aligned_cols=293 Identities=15% Similarity=0.128 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEeccCch---------------------HHHHHHHHHHcCCEEEEEeccCCccccCHHH
Q 007454 171 LESAMKKRIMDFLNISENDYVYDYESEA---------------------VEAMIRTSEKRGARVMSAEFSWPRLRINSEK 229 (603)
Q Consensus 171 ~~~~aR~~Ia~~lna~~~e~vf~~es~s---------------------V~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~ 229 (603)
...+.+++|++++|.. +.++|.....+ ...++...+-.++++.+++.. +.++
T Consensus 44 ~~~~LE~~lA~~~g~e-~al~~~sG~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~------d~~~ 116 (392)
T PLN03227 44 AHLELEQCMAEFLGTE-SAILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHN------DMKD 116 (392)
T ss_pred HHHHHHHHHHHHhCCC-cEEEecCcHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCC------CHHH
Confidence 6778999999999985 56666432111 111222222334455544332 3445
Q ss_pred HHHHHhhcC--------CCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCC--------CCC
Q 007454 230 LRKMVVSKG--------KKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDS--------FGL 292 (603)
Q Consensus 230 L~~~l~~~~--------~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~--------ldl 292 (603)
+++.+..-+ ..++++++|++....|.+|.+.|++.+ ++|+++|+++++|-++..|.. .. +++
T Consensus 117 l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~-g~~G~g~~~~~g~ 195 (392)
T PLN03227 117 LRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTL-GKSGRGSLEHAGL 195 (392)
T ss_pred HHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECccccccc-CCCCCcHHHHcCC
Confidence 555432110 012468999999999999999999866 589999999999998764420 11 122
Q ss_pred C-CCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCccccccccc
Q 007454 293 S-LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVA 371 (603)
Q Consensus 293 s-~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~ 371 (603)
. ..++|.+++|+.|.+| |. .|++..+++.++.++... .+. . + .
T Consensus 196 ~p~~~~Div~~slsk~~g--~~-gg~v~~~~~~~~~~~~~~-~~~----------------------------~---~-~ 239 (392)
T PLN03227 196 KPMVHAEIVTFSLENAFG--SV-GGMTVGSEEVVDHQRLSG-SGY----------------------------C---F-S 239 (392)
T ss_pred CCCCCceEEEeechhhhh--cc-CcEEecCHHHHHHHHHhC-cCc----------------------------c---c-c
Confidence 1 2466999999999988 54 355556665543332110 010 0 1 1
Q ss_pred CC-CChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 007454 372 AT-NTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVN 450 (603)
Q Consensus 372 GT-~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~ 450 (603)
+. +++...+++ .+++.+.+ .+...++++.+.++|.+
T Consensus 240 ~~~~p~~~~aa~-----------------------------------------~al~~~~~--~~~~~~~l~~~~~~l~~ 276 (392)
T PLN03227 240 ASAPPFLAKADA-----------------------------------------TATAGELA--GPQLLNRLHDSIANLYS 276 (392)
T ss_pred CCCCHHHHHHHH-----------------------------------------HHHHHHhc--CHHHHHHHHHHHHHHHH
Confidence 11 122222111 24433222 34566678888999999
Q ss_pred HHhcCCCCCCCCCceEEEeC--CCCCCCCCCEEEEEEccCCCCc-cC----HHHHHHHHhcCCcEEeeCcccCccCCchh
Q 007454 451 ALMKLQHPNTEGNALVKIYG--PKIRFDRGPALAFNVFDWKREK-IE----PVLVQKLADRENISLSYGSLHHIWFSDKY 523 (603)
Q Consensus 451 ~L~~L~h~~~~g~plv~Iyg--p~~~~~rg~ivsFnv~~~~g~~-v~----~~~V~~Lad~~gI~lr~G~~C~~~~~~~~ 523 (603)
+|.+..++. ...+-| .-.....++|+.+.+.+.+... .. ...+.+.+.++||.++.-..+... ..
T Consensus 277 ~L~~~~~~~-----~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~---~~ 348 (392)
T PLN03227 277 TLTNSSHPY-----ALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKK---FL 348 (392)
T ss_pred HHHhcCCcc-----ccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCC---cC
Confidence 997633221 111111 0001246889999985521100 00 013444455679888632111000 00
Q ss_pred hhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhh
Q 007454 524 QKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 524 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
...+...+|++++...|.|||+++++.|++.+++-
T Consensus 349 --------------------------~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 349 --------------------------QLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred --------------------------CCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 11233689999999999999999999999988653
No 122
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.33 E-value=2.2e-11 Score=131.49 Aligned_cols=104 Identities=13% Similarity=0.044 Sum_probs=78.5
Q ss_pred HHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCC
Q 007454 206 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGP 284 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~ 284 (603)
+++.|.++..+++.+ .++|+++|. ++|++|.+.+.+|.+|.+.|++.| ++|+++|+++++|+++..|
T Consensus 110 ~~~~gi~v~~~d~~~------~e~l~~~i~------~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g 177 (377)
T TIGR01324 110 LKRMGVDITYYDPLI------GEDIATLIQ------PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAG 177 (377)
T ss_pred HHhcCcEEEEECCCC------HHHHHHhcC------CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccc
Confidence 345566666554321 266777775 369999999999999999999855 6899999999999999988
Q ss_pred CCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCC
Q 007454 285 KDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTV 325 (603)
Q Consensus 285 ~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~ 325 (603)
.. ...-++++|+++.|++|++|+ +.+ .|+++.+++.+
T Consensus 178 ~~---~~pl~~gaDivv~S~tK~l~G-~~d~~gG~v~~~~~~~ 216 (377)
T TIGR01324 178 LL---FKPLEHGVDISIQAGTKYLVG-HSDIMIGTVVANARTW 216 (377)
T ss_pred cc---cCccccCceEEEecCceeccC-CCCceEEEEEeCHHHH
Confidence 62 233357999999999999986 544 46676665543
No 123
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.33 E-value=1e-09 Score=118.64 Aligned_cols=143 Identities=10% Similarity=0.177 Sum_probs=99.1
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCc-hHH---------------------HHHHHHHHcCCEEEEEeccCCccccCHHHH
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESE-AVE---------------------AMIRTSEKRGARVMSAEFSWPRLRINSEKL 230 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~-sV~---------------------~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L 230 (603)
.+.|+.|++++|+++++++++..+. ++. .....++..|+++..++.+ .+..++.++|
T Consensus 89 ~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~-~~~~~d~~~l 167 (380)
T PLN03026 89 RRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT-PDFSLDVPRI 167 (380)
T ss_pred HHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC-CCCCcCHHHH
Confidence 4799999999999999997754321 111 1223455679999888876 3567899999
Q ss_pred HHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEecccc--CCCCCCCCC-CCCCCCcEEEEcccc
Q 007454 231 RKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACAL--GPKDMDSFG-LSLVRPDFLICSFYQ 306 (603)
Q Consensus 231 ~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~--~~~~m~~ld-ls~~~~Dflv~S~hK 306 (603)
++.+.. .+++++.+...+|.||..+|.+.+. +++.. ++|++|.+-. .... ..+. +....-.+++.||-|
T Consensus 168 ~~~~~~-----~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~-~~~~~~~~~~~viv~~SfSK 240 (380)
T PLN03026 168 VEAVET-----HKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQE-SRMKWVKKYDNLIVLRTFSK 240 (380)
T ss_pred HHHHhc-----cCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCc-chHHHHHhCCCEEEEecchH
Confidence 988842 2688999999999999999999664 66544 8999998732 1110 0111 223345688999999
Q ss_pred cCCCCCCc--eEEEEEeCCCC
Q 007454 307 IFGENPSG--FGCLFVKKSTV 325 (603)
Q Consensus 307 ~fG~~P~G--~G~L~vkk~~~ 325 (603)
.|| ..| +|.++..++.+
T Consensus 241 ~~g--laGlRiGy~~~~~~~i 259 (380)
T PLN03026 241 RAG--LAGLRVGYGAFPLSII 259 (380)
T ss_pred hhc--CccccceeeecCHHHH
Confidence 999 557 57766554443
No 124
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.32 E-value=9.8e-11 Score=127.10 Aligned_cols=138 Identities=14% Similarity=0.146 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEeccCch------------------------HH-HHHHHHHHcCCEEEEEeccCCcc
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDYESEA------------------------VE-AMIRTSEKRGARVMSAEFSWPRL 223 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~es~s------------------------V~-~~~~~a~~~Ga~V~~~~~~~~~g 223 (603)
....++.++++++++|++. -+++..-.++ .. .+...+++.|+++..++++
T Consensus 60 ~p~~~~le~~la~l~g~~~-~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~---- 134 (390)
T PRK08133 60 NPTVTMFQERLAALEGAEA-CVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT---- 134 (390)
T ss_pred ChHHHHHHHHHHHHhCCCc-EEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC----
Confidence 3456789999999999752 2333211111 11 1223345567777776653
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEE
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLIC 302 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~ 302 (603)
+.+++++.|.+ +|++|.+...+|.||.+.|++.| ++|+++|+++++|.+...+..-.++ .+++|+++.
T Consensus 135 --d~~~l~~~i~~------~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~pl---~~g~Divv~ 203 (390)
T PRK08133 135 --DLDAWRAAVRP------NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQPL---KLGADVVIH 203 (390)
T ss_pred --CHHHHHHhcCc------CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCch---hhCCcEEEe
Confidence 57888888753 68999999999999999999855 5899999999999987665411232 357899999
Q ss_pred cccccCCCCCCc--e-EEEEEeCCC
Q 007454 303 SFYQIFGENPSG--F-GCLFVKKST 324 (603)
Q Consensus 303 S~hK~fG~~P~G--~-G~L~vkk~~ 324 (603)
|++|++| +.| + |+++.+++.
T Consensus 204 S~sK~~~--g~g~~~GG~vv~~~~~ 226 (390)
T PRK08133 204 SATKYLD--GQGRVLGGAVVGSKEL 226 (390)
T ss_pred ecceeec--CCcceEeEEEEcCHHH
Confidence 9999998 445 5 445545443
No 125
>PRK08960 hypothetical protein; Provisional
Probab=99.32 E-value=5e-10 Score=121.01 Aligned_cols=195 Identities=12% Similarity=0.061 Sum_probs=124.1
Q ss_pred HHHhhccCcCCCCceeeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHH
Q 007454 96 IRAKEYYQLSLSNHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESA 174 (603)
Q Consensus 96 iR~~efp~L~~~~~vYLDyaa~t-l~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~ 174 (603)
.|+ .++.- .+.++||.+..+ ++++.+++++.+.+... ...| .. . .-..+
T Consensus 24 ~~~-~~~~~--~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~----~~~Y------------~~--~---------~g~~~ 73 (387)
T PRK08960 24 ANE-LEAAG--HDVIHLEIGEPDFTTAEPIVAAGQAALAAG----HTRY------------TA--A---------RGLPA 73 (387)
T ss_pred HHH-HHhcC--CCeEEeCCCCCCCCCCHHHHHHHHHHHhcC----CCcc------------CC--C---------CCCHH
Confidence 444 35543 567999999988 46888888876643210 0000 00 0 11246
Q ss_pred HHHHHHHHcC------CCCCcEEEeccCc-hHHH---------------------HHHHHHHcCCEEEEEeccCC-cccc
Q 007454 175 MKKRIMDFLN------ISENDYVYDYESE-AVEA---------------------MIRTSEKRGARVMSAEFSWP-RLRI 225 (603)
Q Consensus 175 aR~~Ia~~ln------a~~~e~vf~~es~-sV~~---------------------~~~~a~~~Ga~V~~~~~~~~-~g~i 225 (603)
.|+.|+++++ +++++++++..+. ++.. ....++..|+++..++++.. +..+
T Consensus 74 lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 153 (387)
T PRK08960 74 LREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQL 153 (387)
T ss_pred HHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCC
Confidence 8888898874 7888987764321 2111 12334556888888888642 2368
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEecccc-CCCCCCCCCCCCCCCc-E
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACAL-GPKDMDSFGLSLVRPD-F 299 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq~-~~~~m~~ldls~~~~D-f 299 (603)
+.++|++.+.. ++++++++.-+|.||.++|.+.+ +.|+++|+++++|-+-. .-.+-....+-....+ +
T Consensus 154 d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi 227 (387)
T PRK08960 154 TPALVERHWNA------DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAF 227 (387)
T ss_pred CHHHHHHHhCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEE
Confidence 89999888763 57888899999999999998633 35789999999998621 1000001111112233 6
Q ss_pred EEEcccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 300 LICSFYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 300 lv~S~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
++.|+.|.|| ..| +|.++..+++++.+
T Consensus 228 ~~~S~SK~~g--~~GlRiG~~~~~~~~~~~~ 256 (387)
T PRK08960 228 VLNSFSKYFG--MTGWRLGWLVAPPAAVPEL 256 (387)
T ss_pred EEeecccccC--CcccEEEEEEcCHHHHHHH
Confidence 7899999999 448 99999876654433
No 126
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.32 E-value=7.1e-10 Score=122.34 Aligned_cols=118 Identities=15% Similarity=0.086 Sum_probs=91.1
Q ss_pred HHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCee--EEEEeCccccccccccHHHHH-HHHhCCcEE
Q 007454 199 VEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRG--LFVFPLHSRMTGARYPYLWMR-IAQENDWHI 275 (603)
Q Consensus 199 V~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~--Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~v 275 (603)
+..+.++++--|.+++.++.+..+.++|.++|+++|.+. |. .|+-++-.-.||.+=|++.|+ +|+++++++
T Consensus 167 H~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~------t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~l 240 (460)
T COG0076 167 HFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDEN------TIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWL 240 (460)
T ss_pred hhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhh------ccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcE
Confidence 344455566668888888877327899999999999863 33 377777788899999999876 899999999
Q ss_pred EEeccccCCCC--C---CCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 007454 276 LIDACALGPKD--M---DSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 276 lvDAaq~~~~~--m---~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
|||||-.+..- + ..+|...-++|-|++++|||+.. |.|.|++++|+.
T Consensus 241 HVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~a-P~~~G~il~rd~ 292 (460)
T COG0076 241 HVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLA-PIGCGVVLFRDE 292 (460)
T ss_pred EEEccccceeecccCccchhhcCCCCceEEEECcccccCC-CCCceEEEEECH
Confidence 99997433220 0 12244555899999999999887 899999999987
No 127
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.32 E-value=1.8e-09 Score=117.00 Aligned_cols=268 Identities=16% Similarity=0.135 Sum_probs=164.1
Q ss_pred HHHHHHHHHHcCCC-CCcEEEecc-CchHHHHHHHHHHcC-CEEEEEeccCC------------------------c-cc
Q 007454 173 SAMKKRIMDFLNIS-ENDYVYDYE-SEAVEAMIRTSEKRG-ARVMSAEFSWP------------------------R-LR 224 (603)
Q Consensus 173 ~~aR~~Ia~~lna~-~~e~vf~~e-s~sV~~~~~~a~~~G-a~V~~~~~~~~------------------------~-g~ 224 (603)
.+..++++++++.+ +++++|... ++++...++.++..| -+|....-.+. + ..
T Consensus 88 ~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (398)
T PRK03244 88 IALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEH 167 (398)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceE
Confidence 46777888888854 366666543 456665556555444 23433311100 0 00
Q ss_pred ---cCHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCC
Q 007454 225 ---INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLS 293 (603)
Q Consensus 225 ---i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls 293 (603)
.+.++|++.+. +++++|.+-...|.+|.+.| ++.+ ++|+++|+++++|-++.+ +.. +..+...
T Consensus 168 ~~~~d~~~l~~~~~------~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~ 241 (398)
T PRK03244 168 VPYGDVDALAAAVD------DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHD 241 (398)
T ss_pred eCCCCHHHHHHhhc------CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhh
Confidence 15778887774 25777777778999999998 6655 489999999999998742 211 1112334
Q ss_pred CCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCC
Q 007454 294 LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAAT 373 (603)
Q Consensus 294 ~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT 373 (603)
...||++++| |.+|. .-.+|++++++++++.+.+...+.+ + +
T Consensus 242 ~~~pDi~t~s--K~l~~-G~~ig~~~~~~~~~~~~~~~~~~~t--------------------------------~--~- 283 (398)
T PRK03244 242 GVTPDVVTLA--KGLGG-GLPIGACLAFGPAADLLTPGLHGST--------------------------------F--G- 283 (398)
T ss_pred CCCCCEEEEc--hhhhC-CcccEEEEEcHHHHhhccCCCCcCC--------------------------------C--C-
Confidence 5579987665 99883 3348999998886654442110000 0 0
Q ss_pred CChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Q 007454 374 NTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALM 453 (603)
Q Consensus 374 ~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~ 453 (603)
.|..+..+. ++.|+.+.. +...+|++.+.++|.+.|.
T Consensus 284 ~~~~~~aaa----------------------------------------~a~l~~~~~---~~~~~~~~~~~~~l~~~L~ 320 (398)
T PRK03244 284 GNPVACAAA----------------------------------------LAVLDTIAS---EGLLENAERLGEQLRAGIE 320 (398)
T ss_pred CCHHHHHHH----------------------------------------HHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Confidence 111111111 135554432 3567888999999999999
Q ss_pred cCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHh
Q 007454 454 KLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEK 533 (603)
Q Consensus 454 ~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~ 533 (603)
++.+ |.+.-. ..+|.++.+.++.. ....+.+.+.++||.++..
T Consensus 321 ~~~~------~~~~~v-----~g~g~~~~i~~~~~-----~~~~~~~~l~~~Gv~~~~~--------------------- 363 (398)
T PRK03244 321 ALGH------PLVDHV-----RGRGLLLGIVLTAP-----VAKAVEAAAREAGFLVNAV--------------------- 363 (398)
T ss_pred hcCC------CceeeE-----eeccEEEEEEEecc-----HHHHHHHHHHHCCeEEeec---------------------
Confidence 8754 222110 12577787777532 1223444445678887631
Q ss_pred hhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 534 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
...+||+|++...|.+||+++++.|++.+..
T Consensus 364 -------------------~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 364 -------------------APDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred -------------------CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 0148999999999999999999999998753
No 128
>PRK06460 hypothetical protein; Provisional
Probab=99.31 E-value=3.5e-10 Score=122.18 Aligned_cols=147 Identities=11% Similarity=0.086 Sum_probs=99.6
Q ss_pred ccccchHHHHHHHHHHHHHHHcCCCCCcEEEeccCchHHHH-------------------------HHHHHHcCCEEEEE
Q 007454 162 LLHGGQESGLESAMKKRIMDFLNISENDYVYDYESEAVEAM-------------------------IRTSEKRGARVMSA 216 (603)
Q Consensus 162 ~~~g~~~~~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~-------------------------~~~a~~~Ga~V~~~ 216 (603)
+.|+.......++.|++|++++|+.+ +++|.....++..+ ...++..|++|..+
T Consensus 37 ~~y~r~~~p~~~~L~~~lA~l~g~~~-~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~ 115 (376)
T PRK06460 37 YRYSREANPTVLELTKKIVELENAEM-GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS 115 (376)
T ss_pred cceeCCCCccHHHHHHHHHHHhCCCc-EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence 44666666778899999999999954 56663222222222 23344556665555
Q ss_pred eccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCC
Q 007454 217 EFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLV 295 (603)
Q Consensus 217 ~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~ 295 (603)
+.+ +.+.+++.+. ++++||.+...+|.||.++|++.| ++|+++|++|++|.++..+....++ ..
T Consensus 116 ~~~------~~~~l~~~~~------~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l---~~ 180 (376)
T PRK06460 116 NPG------SDNIIEKAKS------KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQKPL---EL 180 (376)
T ss_pred CCC------CHHHHHHhcC------CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccCChh---hc
Confidence 432 1233433332 368999999999999999999966 5899999999999998766422222 34
Q ss_pred CCcEEEEcccccCCCCCCc--eEEEEEeCCCC
Q 007454 296 RPDFLICSFYQIFGENPSG--FGCLFVKKSTV 325 (603)
Q Consensus 296 ~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~ 325 (603)
++|+++.|++|+||+ +.| .|+++.+++.+
T Consensus 181 ~~divv~S~sK~l~G-~~~~~~G~~~~~~~l~ 211 (376)
T PRK06460 181 GADIVVHSASKFLAG-HNDVIAGLAAGYGKLL 211 (376)
T ss_pred CCCEEEeecceeccC-CCCceEEEEecCHHHH
Confidence 689999999999984 433 67666555543
No 129
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.31 E-value=2.4e-09 Score=116.15 Aligned_cols=215 Identities=10% Similarity=0.102 Sum_probs=138.1
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCCCCC----CCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKDMDS----FGLSLV 295 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~m~~----ldls~~ 295 (603)
|.++|++.|.. ++++|.+....|.+|.++| ++.+ ++|+++|+++++|.++. ++. .. .+....
T Consensus 176 d~~~le~~i~~------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~--~g~~~~~~~~g~ 247 (401)
T PRK00854 176 DAEALEAAITP------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGR--TGKLLAEEHEGI 247 (401)
T ss_pred CHHHHHHHhCC------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCC--CchHhHHhhcCC
Confidence 67888888853 5899999999999999998 7755 48999999999999987 443 12 112234
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCC
Q 007454 296 RPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 375 (603)
Q Consensus 296 ~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n 375 (603)
.+|++++| |++++.---+|++..++++++.+.+...+.+ -+.++
T Consensus 248 ~~D~~~~~--K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t----------------------------------~~~~~ 291 (401)
T PRK00854 248 EADVTLIG--KALSGGFYPVSAVLSNSEVLGVLKPGQHGST----------------------------------FGGNP 291 (401)
T ss_pred CCCEEEec--ccccCCccCeEEEEEcHHHHhcccCCCCCCC----------------------------------CCcCH
Confidence 68999987 9876310127888888887655542110000 01111
Q ss_pred hhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC
Q 007454 376 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 455 (603)
Q Consensus 376 ~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L 455 (603)
+...+++ ++|+.+.+. .+.++.+.+.+++.+.|.++
T Consensus 292 ~~~aa~~-----------------------------------------a~L~~l~~~---~~~~~~~~~~~~l~~~L~~~ 327 (401)
T PRK00854 292 LACAVAR-----------------------------------------AALKVLTEE---GMIENAAEMGAYFLEGLRSI 327 (401)
T ss_pred HHHHHHH-----------------------------------------HHHHHHHHc---CHHHHHHHHHHHHHHHHHhh
Confidence 1111111 466665542 34577888899999999876
Q ss_pred CCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhh
Q 007454 456 QHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTD 535 (603)
Q Consensus 456 ~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~ 535 (603)
.. +.+. .. ...|.++.|.+.+... -...+++.|. ++||.++..
T Consensus 328 ~~------~~~~--~~---~g~g~~~~i~~~~~~~--~~~~~~~~L~-~~GV~v~~~----------------------- 370 (401)
T PRK00854 328 RS------NIVR--EV---RGRGLMLAVELEPEAG--GARQYCEALK-ERGLLAKDT----------------------- 370 (401)
T ss_pred cc------CceE--EE---eccceEEEEEEecCch--hHHHHHHHHH-HCCeEEecC-----------------------
Confidence 32 1111 01 1357778777644211 1123344454 468887410
Q ss_pred cccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 007454 536 REAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~ 582 (603)
+.+.||+++++..|.+||+++++.|++++.
T Consensus 371 -----------------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 371 -----------------HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred -----------------CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 125899999999999999999999998764
No 130
>PRK08912 hypothetical protein; Provisional
Probab=99.30 E-value=3.7e-10 Score=121.98 Aligned_cols=118 Identities=14% Similarity=0.121 Sum_probs=85.1
Q ss_pred HHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEe
Q 007454 203 IRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILID 278 (603)
Q Consensus 203 ~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvD 278 (603)
...++..|+++..++++..+..++.++|++.+.. ++++++++..+|.||.++|.+. ++.|+++++++++|
T Consensus 125 ~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~D 198 (387)
T PRK08912 125 LPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSP------RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICD 198 (387)
T ss_pred HHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCc------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEh
Confidence 3456778999999988644567899999998753 5788889999999999999653 35689999999999
Q ss_pred cccc----CCCCCCCC-CCCC-CCCcEEEEcccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 279 ACAL----GPKDMDSF-GLSL-VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 279 Aaq~----~~~~m~~l-dls~-~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
.+.. .+....++ .+.. ...++++.|+.|.|| ..| +|++++.+++++.+
T Consensus 199 e~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g--~~GlRiG~~~~~~~~~~~l 254 (387)
T PRK08912 199 EVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFS--LTGWKVGFVCAAPPLLRVL 254 (387)
T ss_pred hhhhhcccCCCCCcChhhCCCccCceEEEeechhhcc--CcCceeEEEecCHHHHHHH
Confidence 8642 11100121 1211 245799999999999 448 89999876655433
No 131
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.30 E-value=1.7e-09 Score=118.80 Aligned_cols=104 Identities=12% Similarity=0.187 Sum_probs=82.5
Q ss_pred HHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEecccc
Q 007454 204 RTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACAL 282 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~ 282 (603)
..+++.|+++.+++.. +.+++++.|.. +|++|.+.+.+|.||.+.|++.| ++|+++|+++++|.++.
T Consensus 121 ~~~~~~G~~v~~vd~~------d~~~l~~ai~~------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a 188 (427)
T PRK05994 121 HAFKSFGWQVRWADAD------DPASFERAITP------RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLA 188 (427)
T ss_pred HHHHhcCcEEEEECCC------CHHHHHHhcCc------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcc
Confidence 3355678877777642 57888888853 68999999999999999999855 58999999999999998
Q ss_pred CCCCCCCCCCCCCCCcEEEEcccccCCCCCCc-eEEEEEeCC
Q 007454 283 GPKDMDSFGLSLVRPDFLICSFYQIFGENPSG-FGCLFVKKS 323 (603)
Q Consensus 283 ~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G-~G~L~vkk~ 323 (603)
.|....++ .+++|+++.|+||++|+ |.| +|++++...
T Consensus 189 ~~~~~~pl---~~gaDivv~S~tK~lgg-~~~~~gG~v~~~~ 226 (427)
T PRK05994 189 SPYLIRPI---EHGADIVVHSLTKFLGG-HGNSMGGIIVDGG 226 (427)
T ss_pred ccccCCcc---ccCCcEEEEcCccccCC-CCCcEEEEEEeCC
Confidence 88632233 47999999999999995 444 888888543
No 132
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.30 E-value=1.6e-09 Score=117.61 Aligned_cols=213 Identities=13% Similarity=0.199 Sum_probs=136.4
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCC--CCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKD--MDSFGLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~--m~~ldls~~~~ 297 (603)
+.++|++.+.. ++++|.+...+|.+|.+.| ++.+ ++|+++|+.+++|-++. .+.. +..++.....|
T Consensus 175 d~~~l~~~i~~------~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~p 248 (396)
T PRK04073 175 DLEALKAAITP------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTP 248 (396)
T ss_pred CHHHHHHhccc------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCC
Confidence 56778777752 5899999999999999988 5545 47999999999999876 3321 11234445579
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 298 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
|++++| |.+|...--+|+++.++++++.+.....+. .-+..++.
T Consensus 249 di~~~s--K~lg~gg~~ig~~~~~~~i~~~~~~~~~~~----------------------------------t~~~~~~~ 292 (396)
T PRK04073 249 DMYILG--KALGGGVFPISCVAANRDILGVFTPGSHGS----------------------------------TFGGNPLA 292 (396)
T ss_pred CEEEec--ccccCCCCcceEEEEcHHHHhhhcCCCCCC----------------------------------CCCCCHHH
Confidence 998875 988741012899999887765543211000 00111122
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
..+++ ++|+.+++- .+.++.+.+.++|.+.|.++.+
T Consensus 293 ~aaa~-----------------------------------------aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~ 328 (396)
T PRK04073 293 CAVSI-----------------------------------------AALEVLEEE---KLPERSLELGEYFKEQLKEIDN 328 (396)
T ss_pred HHHHH-----------------------------------------HHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcC
Confidence 11111 466665442 3456778889999999988742
Q ss_pred CCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcc
Q 007454 458 PNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDRE 537 (603)
Q Consensus 458 ~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~ 537 (603)
+.+ ++. ..+|..+.+.+.+ + ...+.++| .++||.++..
T Consensus 329 ------~~i---~~~--~~~g~~~~~~~~~-~----~~~~~~~l-~~~Gv~~~~~------------------------- 366 (396)
T PRK04073 329 ------PMI---KEV--RGRGLFIGVELNE-P----ARPYCEAL-KEEGLLCKET------------------------- 366 (396)
T ss_pred ------Ccc---cce--ecceEEEEEEecc-h----HHHHHHHH-HHCCeEEecC-------------------------
Confidence 222 111 1246777777653 1 12334444 4568876410
Q ss_pred cccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 007454 538 AKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 538 ~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l 581 (603)
+.++||+++.+..|.|||+++++.|++++
T Consensus 367 ---------------~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 367 ---------------HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ---------------CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 11489999999999999999999998875
No 133
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.29 E-value=5.2e-10 Score=121.29 Aligned_cols=99 Identities=17% Similarity=0.141 Sum_probs=74.3
Q ss_pred HcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCC
Q 007454 208 KRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKD 286 (603)
Q Consensus 208 ~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~ 286 (603)
+.|+++..++. .+.++++++|.+ +|++|.+...+|.||.++|++.| ++|+++|++|++|.++..|.-
T Consensus 115 ~~gi~v~~vd~------~d~e~l~~~i~~------~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~ 182 (388)
T PRK08861 115 KGDFKVQFVDQ------SDAAALDAALAK------KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVL 182 (388)
T ss_pred cCCeEEEEECC------CCHHHHHHhcCc------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccc
Confidence 34555555532 357788887753 68999999999999999999965 589999999999999887641
Q ss_pred CCCCCCCCCCCcEEEEcccccCCCCCCc-eEE-EEEeC
Q 007454 287 MDSFGLSLVRPDFLICSFYQIFGENPSG-FGC-LFVKK 322 (603)
Q Consensus 287 m~~ldls~~~~Dflv~S~hK~fG~~P~G-~G~-L~vkk 322 (603)
-.+++ +++|+++.|+||++|+ |.+ +|. +..++
T Consensus 183 ~~pl~---~GaDivv~S~tK~l~G-~~d~~gG~i~~~~ 216 (388)
T PRK08861 183 QKPLE---LGADFVIHSTTKYING-HSDVIGGVLITKT 216 (388)
T ss_pred CCCcc---cCCCEEEeecceeccC-CCcceeEEEEecH
Confidence 13443 5899999999999987 554 344 44443
No 134
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.29 E-value=1.1e-10 Score=126.59 Aligned_cols=143 Identities=13% Similarity=0.098 Sum_probs=94.3
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCchHHHHHHHHHHcCCEEEEEeccCC-------------------ccccCHHHHHHH
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESEAVEAMIRTSEKRGARVMSAEFSWP-------------------RLRINSEKLRKM 233 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~sV~~~~~~a~~~Ga~V~~~~~~~~-------------------~g~i~~~~L~~~ 233 (603)
++.+++|++++|.. +.++|..-..++..++....+.|.+|......+. ....+.++++++
T Consensus 64 ~~Le~~lA~l~G~~-~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~ 142 (386)
T PRK06767 64 KLFEERMAVLEGGE-EALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENK 142 (386)
T ss_pred HHHHHHHHHHhCCC-cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHh
Confidence 46788889999863 4555543332333222222233444433221000 001256778777
Q ss_pred HhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCC
Q 007454 234 VVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENP 312 (603)
Q Consensus 234 l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P 312 (603)
+.+ +|+||.+...+|.||.+.|++.| ++|+++|+.|++|.++..+. ...++ ..++|+++.|++|++|+ +
T Consensus 143 i~~------~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~--~~~pl-~~g~Div~~S~sK~l~g-~ 212 (386)
T PRK06767 143 IRP------NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPY--LQRPL-ELGCDAVVHSATKYIGG-H 212 (386)
T ss_pred hCc------CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccc--cCCch-hcCCcEEEecCcceecC-C
Confidence 753 68999999999999999999866 58999999999999987664 23333 35899999999999985 4
Q ss_pred Cc--eEEEEEeCCCCc
Q 007454 313 SG--FGCLFVKKSTVP 326 (603)
Q Consensus 313 ~G--~G~L~vkk~~~~ 326 (603)
.+ .|+++.+++.+.
T Consensus 213 g~~~gG~v~~~~~~i~ 228 (386)
T PRK06767 213 GDVVAGVTICKTRALA 228 (386)
T ss_pred CCceeEEEEeChHHHH
Confidence 33 578887776543
No 135
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.28 E-value=1e-09 Score=119.71 Aligned_cols=135 Identities=10% Similarity=0.116 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEeccCchHHHHHH-------------------------HHHHcCCEEEEEeccCCcccc
Q 007454 171 LESAMKKRIMDFLNISENDYVYDYESEAVEAMIR-------------------------TSEKRGARVMSAEFSWPRLRI 225 (603)
Q Consensus 171 ~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~~~-------------------------~a~~~Ga~V~~~~~~~~~g~i 225 (603)
..++.+++|+++.|+ ++.+++...+.++..++. .+++.|.++..++. .
T Consensus 61 ~~~~Le~~lA~l~g~-~~~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~------~ 133 (405)
T PRK08776 61 TRDLLGEALAELEGG-AGGVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL------T 133 (405)
T ss_pred HHHHHHHHHHHHhCC-CceEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC------C
Confidence 345677888888887 345555433333322222 23334444444432 2
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcc
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSF 304 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~ 304 (603)
+.++|++.+.. +|+|+.+...+|.||.+.|++.| ++|+++|+.+++|.++..|....++ .+++|++++|+
T Consensus 134 d~~~l~~~i~~------~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl---~~gaDivv~S~ 204 (405)
T PRK08776 134 DPRSLADALAQ------SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPL---EFGADLVLHST 204 (405)
T ss_pred CHHHHHHhcCc------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCcc---cccCCEEEecC
Confidence 57788877752 68999999999999999999866 5899999999999998776421244 36899999999
Q ss_pred cccCCCCCCc--eEEEEEeC
Q 007454 305 YQIFGENPSG--FGCLFVKK 322 (603)
Q Consensus 305 hK~fG~~P~G--~G~L~vkk 322 (603)
||+||+ |.+ .|++++++
T Consensus 205 tK~l~g-~~~~~~G~vv~~~ 223 (405)
T PRK08776 205 TKYING-HSDVVGGAVVARD 223 (405)
T ss_pred ceeecC-CCCceEEEEEeCC
Confidence 999985 655 46665543
No 136
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.28 E-value=3.7e-10 Score=120.55 Aligned_cols=147 Identities=12% Similarity=0.165 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHcCCCCCcEEEeccCc-hH---------------------HHHHHHHHHcCCEEEEEeccCCccccCHHH
Q 007454 172 ESAMKKRIMDFLNISENDYVYDYESE-AV---------------------EAMIRTSEKRGARVMSAEFSWPRLRINSEK 229 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~vf~~es~-sV---------------------~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~ 229 (603)
..+.|+.|++++++++++++++.... ++ ......+...|+++..++++ ++.++.++
T Consensus 66 ~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~d~~~ 143 (359)
T PRK03158 66 APELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK--DGGHDLEA 143 (359)
T ss_pred HHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC--CCCcCHHH
Confidence 35799999999999999998764321 11 11223455678899988875 56788999
Q ss_pred HHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHh--CCcEEEEecccc----CCCCCCCCC-CCCCCCcEEE
Q 007454 230 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQE--NDWHILIDACAL----GPKDMDSFG-LSLVRPDFLI 301 (603)
Q Consensus 230 L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e--~g~~vlvDAaq~----~~~~m~~ld-ls~~~~Dflv 301 (603)
|++.+.. +++++.++..+|.||.++|.+.+ ++++. +|+++++|-+.. .+.....+. +...+..+++
T Consensus 144 l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~ 217 (359)
T PRK03158 144 MLKAIDE------QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVL 217 (359)
T ss_pred HHHhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEE
Confidence 9887753 57888888999999999999854 45654 589999998742 111000111 1223456888
Q ss_pred EcccccCCCCCCce--EEEEEeCCCCcCc
Q 007454 302 CSFYQIFGENPSGF--GCLFVKKSTVPIL 328 (603)
Q Consensus 302 ~S~hK~fG~~P~G~--G~L~vkk~~~~~L 328 (603)
.|+-|.|| ..|+ |.++..++.++.+
T Consensus 218 ~S~SK~~g--~~GlRiG~~v~~~~~~~~~ 244 (359)
T PRK03158 218 RTFSKAYG--LAALRVGYGIASEELIEKL 244 (359)
T ss_pred EechHhhc--CcchhhehhcCCHHHHHHH
Confidence 89999999 5585 9888766654433
No 137
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.28 E-value=2e-10 Score=125.15 Aligned_cols=141 Identities=11% Similarity=0.109 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEeccCchHH-------------------------HHHHHHHHcCCEEEEEeccCCcccc
Q 007454 171 LESAMKKRIMDFLNISENDYVYDYESEAVE-------------------------AMIRTSEKRGARVMSAEFSWPRLRI 225 (603)
Q Consensus 171 ~~~~aR~~Ia~~lna~~~e~vf~~es~sV~-------------------------~~~~~a~~~Ga~V~~~~~~~~~g~i 225 (603)
..++.++++++++|+++ .+++..-..++. .....++..|+++..++.+
T Consensus 66 ~~~~le~~lA~l~g~~~-~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~------ 138 (403)
T PRK07503 66 TLALLEQRMASLEGGEA-AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT------ 138 (403)
T ss_pred hHHHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC------
Confidence 34577888888888854 354432111111 1223344567777666542
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcc
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSF 304 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~ 304 (603)
+.++|+++|.. +|++|.+...+|.||.+.|++.| ++|+++|+.+++|.++..+....++ .+++|++++|+
T Consensus 139 d~~~l~~~i~~------~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l---~~g~Di~v~S~ 209 (403)
T PRK07503 139 DPAALKAAISD------KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPL---ELGADLVVHSA 209 (403)
T ss_pred CHHHHHHhcCc------cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch---hhCCCEEEccc
Confidence 57888888753 68999999999999999999855 5899999999999998766421233 35899999999
Q ss_pred cccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 305 YQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 305 hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
+|++|+ |.+ .|+++.+++..+.+
T Consensus 210 tK~l~g-~gd~~gG~v~~~~~l~~~l 234 (403)
T PRK07503 210 TKYLGG-HGDITAGLVVGGKALADRI 234 (403)
T ss_pred cccccC-CCceeEEEEEcCHHHHHHH
Confidence 999994 433 67777655544333
No 138
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.27 E-value=2.4e-09 Score=117.77 Aligned_cols=105 Identities=17% Similarity=0.182 Sum_probs=84.3
Q ss_pred HHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEecc
Q 007454 202 MIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDAC 280 (603)
Q Consensus 202 ~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAa 280 (603)
+...+++.|++|+.++.. +.++|+++|.. ++++|.+.+.+|.||.++|++.| ++|+++|+.|++|++
T Consensus 120 ~~~~~~~~Gv~v~~vd~~------d~e~l~~ai~~------~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t 187 (431)
T PRK08248 120 FAHTLPKLGITVKFVDPS------DPENFEAAITD------KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNT 187 (431)
T ss_pred HHHHHHhCCEEEEEECCC------CHHHHHHhcCC------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCC
Confidence 344566788888888652 67888888863 68999999999999999999855 589999999999999
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCC
Q 007454 281 ALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKS 323 (603)
Q Consensus 281 q~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~ 323 (603)
+..|.. ..++ ++++|+++.|+||++|+ | | +|.+++.+.
T Consensus 188 ~a~~~~--~~pl-~~gaDivv~S~tK~lgg-~-g~~~Gg~v~~~~ 227 (431)
T PRK08248 188 FASPYL--LRPI-EHGADIVVHSATKFIGG-H-GTSIGGVIVDSG 227 (431)
T ss_pred CCcccc--CChh-HcCCCEEEEcCccccCC-C-CCceEEEEEeCC
Confidence 887752 3334 57999999999999995 4 5 898888654
No 139
>PRK07505 hypothetical protein; Provisional
Probab=99.27 E-value=2.2e-09 Score=116.74 Aligned_cols=183 Identities=12% Similarity=0.145 Sum_probs=106.7
Q ss_pred CCceeeecCCCCCC----CHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHH
Q 007454 107 SNHTCLDYFGIGLF----SYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDF 182 (603)
Q Consensus 107 ~~~vYLDyaa~tl~----~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~ 182 (603)
++..|||.++.+.+ .+.+++++.+.+... ++.++....+....+..++.+++|+++
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~--------------------g~~~~~~~~~~~~~~~~~~l~~~la~~ 103 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRT--------------------GSLHLSSSRTRVRSQILKDLEEALSEL 103 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHHHh--------------------CCCCCCccchhhhhHHHHHHHHHHHHH
Confidence 57789999887766 678888877643211 111100001112356788999999999
Q ss_pred cCCCCCcEEEeccCchHHHHHHHHHH---c-CC-EEEEEec----------cCC--cc------ccCHHHHHHHHhhcCC
Q 007454 183 LNISENDYVYDYESEAVEAMIRTSEK---R-GA-RVMSAEF----------SWP--RL------RINSEKLRKMVVSKGK 239 (603)
Q Consensus 183 lna~~~e~vf~~es~sV~~~~~~a~~---~-Ga-~V~~~~~----------~~~--~g------~i~~~~L~~~l~~~~~ 239 (603)
++. +.++|...++++...+..+.+ . |- +|....- .+. .. -.|.++|++++..
T Consensus 104 ~~~--~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~d~~~l~~~~~~--- 178 (402)
T PRK07505 104 FGA--SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHNDLDALEDICKT--- 178 (402)
T ss_pred hCC--CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCCCHHHHHHHHhc---
Confidence 987 666666544444433433221 0 11 1222210 000 00 0267888888753
Q ss_pred CCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccC---C-CC-CC---CCCCCCCCCcEEEEcccccCCC
Q 007454 240 KKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALG---P-KD-MD---SFGLSLVRPDFLICSFYQIFGE 310 (603)
Q Consensus 240 ~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~---~-~~-m~---~ldls~~~~Dflv~S~hK~fG~ 310 (603)
+++++++..-.|.||.+.|++.+ ++|+++|+++++|.++.. + .. +. .+++......+++.|+=|.||.
T Consensus 179 ---~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~ 255 (402)
T PRK07505 179 ---NKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGA 255 (402)
T ss_pred ---CCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhc
Confidence 35667777677899999999866 489999999999999742 1 10 00 1221111224666789999983
Q ss_pred CCCceEEEEE
Q 007454 311 NPSGFGCLFV 320 (603)
Q Consensus 311 ~P~G~G~L~v 320 (603)
.| |.+.+
T Consensus 256 --~G-g~~~~ 262 (402)
T PRK07505 256 --SG-GVIML 262 (402)
T ss_pred --cC-eEEEe
Confidence 34 65544
No 140
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.27 E-value=5.7e-10 Score=121.06 Aligned_cols=143 Identities=10% Similarity=0.139 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEeccCchHHHHHHHHHHcCCEEEEEeccCCc------------c-------ccCHHHH
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDYESEAVEAMIRTSEKRGARVMSAEFSWPR------------L-------RINSEKL 230 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~~~~a~~~Ga~V~~~~~~~~~------------g-------~i~~~~L 230 (603)
....+.+++|+++.|++.. ++|..-..++..+....-+.|.+|......+.. + ..+.++|
T Consensus 61 p~~~~Le~~lA~~~g~~~~-i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l 139 (388)
T PRK07811 61 PTRTALEEQLAALEGGAYG-RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAV 139 (388)
T ss_pred ccHHHHHHHHHHHhCCCce-EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHH
Confidence 3456889999999998643 444322223333333333344444433211110 0 1367888
Q ss_pred HHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCC
Q 007454 231 RKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFG 309 (603)
Q Consensus 231 ~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG 309 (603)
++.|.. +|++|.+...+|.||.+.|++.| ++|+++|+++++|.++..+....++ .+++|++++|++|++|
T Consensus 140 ~~~i~~------~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~---~~gaDivv~S~sK~l~ 210 (388)
T PRK07811 140 RAAITP------RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPL---ALGADVVVHSTTKYIG 210 (388)
T ss_pred HHhcCc------CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCch---hhCCcEEEecCceeec
Confidence 888753 68999999999999999999965 5899999999999998776421233 3589999999999998
Q ss_pred CCCCc--eEEEEEeCC
Q 007454 310 ENPSG--FGCLFVKKS 323 (603)
Q Consensus 310 ~~P~G--~G~L~vkk~ 323 (603)
+ |.+ .|++++++.
T Consensus 211 g-~~~~~gG~vv~~~~ 225 (388)
T PRK07811 211 G-HSDVVGGALVTNDE 225 (388)
T ss_pred C-CCCcEEEEEEECCH
Confidence 5 655 477777643
No 141
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.26 E-value=6.9e-10 Score=120.80 Aligned_cols=131 Identities=11% Similarity=0.091 Sum_probs=92.8
Q ss_pred ccchHHHHHHHHHHHHHHHcCCCCCcEEEeccCchHHHH-------------------------HHHHHHcCCEEEEEec
Q 007454 164 HGGQESGLESAMKKRIMDFLNISENDYVYDYESEAVEAM-------------------------IRTSEKRGARVMSAEF 218 (603)
Q Consensus 164 ~g~~~~~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~-------------------------~~~a~~~Ga~V~~~~~ 218 (603)
|+.......++.+++|++++|++ ..++|.....++..+ ...+++.|+++..++.
T Consensus 58 y~r~~~p~~~~le~~lA~l~g~~-~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 136 (398)
T PRK08249 58 YSRNTNPTVQAFEEKVRILEGAE-AATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET 136 (398)
T ss_pred ccCCCChHHHHHHHHHHHHhCCC-eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC
Confidence 44444556678999999999974 345553222222111 1234456766665542
Q ss_pred cCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCC
Q 007454 219 SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRP 297 (603)
Q Consensus 219 ~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~ 297 (603)
.+.++++++|.+ +|++|.+...+|.||.+.|++.| ++|+++|+.+++|.++..+..-.++ .+++
T Consensus 137 ------~d~e~l~~~i~~------~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l---~~~~ 201 (398)
T PRK08249 137 ------GDHEQIEAEIAK------GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPL---ALGA 201 (398)
T ss_pred ------CCHHHHHHhcCC------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCch---hhCC
Confidence 367888888853 68999999999999999999855 5899999999999998766421122 3689
Q ss_pred cEEEEcccccCCC
Q 007454 298 DFLICSFYQIFGE 310 (603)
Q Consensus 298 Dflv~S~hK~fG~ 310 (603)
|+++.|++|++|+
T Consensus 202 Divv~S~sK~l~g 214 (398)
T PRK08249 202 DLVIHSATKFLSG 214 (398)
T ss_pred CEEeccCceecCC
Confidence 9999999999984
No 142
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.26 E-value=6.3e-10 Score=120.64 Aligned_cols=87 Identities=16% Similarity=0.164 Sum_probs=68.8
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEc
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICS 303 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S 303 (603)
.+.+++++++.. +|+++.+...+|.||.+.|++.| ++|+++|++|++|.++..|....++ .+++|+++.|
T Consensus 125 ~d~e~l~~~l~~------~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl---~~gaDivv~S 195 (386)
T PRK08045 125 GDEQALRAALAE------KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPL---ALGADLVLHS 195 (386)
T ss_pred CCHHHHHHhccc------CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCch---hhCCCEEEee
Confidence 367788887753 68999999999999999999855 5899999999999998877521233 4589999999
Q ss_pred ccccCCCCCCc--eEEEEEe
Q 007454 304 FYQIFGENPSG--FGCLFVK 321 (603)
Q Consensus 304 ~hK~fG~~P~G--~G~L~vk 321 (603)
++|++|+ |.+ .|+++.+
T Consensus 196 ~tK~l~G-~~d~~~G~vi~~ 214 (386)
T PRK08045 196 CTKYLNG-HSDVVAGVVIAK 214 (386)
T ss_pred cceeccC-CCCceeEEEEeC
Confidence 9999986 555 4555443
No 143
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.25 E-value=7.9e-10 Score=120.07 Aligned_cols=105 Identities=14% Similarity=0.121 Sum_probs=78.3
Q ss_pred HHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCC
Q 007454 206 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGP 284 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~ 284 (603)
+...|+++.+++++ +.+++++.|.. +|++|.+...+|.+|.+.|++.| ++|+++|+++++|.++..|
T Consensus 119 ~~~~G~~~~~vd~~------d~e~l~~~i~~------~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~ 186 (391)
T TIGR01328 119 LTKFGIQVDFINMA------IPEEVKAHIKD------NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATP 186 (391)
T ss_pred HhcCCeEEEEECCC------CHHHHHHhhcc------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchh
Confidence 34556666666543 57788887753 68999999999999999999855 5899999999999998766
Q ss_pred CCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCCc
Q 007454 285 KDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVP 326 (603)
Q Consensus 285 ~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~ 326 (603)
. ..-.+ ..++|++++|++|+||+ |.+ .|+++.+++.++
T Consensus 187 ~--~~~~~-~~g~Divv~S~sK~lgg-~g~~~gG~v~~~~~li~ 226 (391)
T TIGR01328 187 M--LTNPV-ALGVDVVVHSATKYIGG-HGDVVAGLICGKAELLQ 226 (391)
T ss_pred c--cCCch-hcCCCEEEccccccccC-CCCceEEEEEcCHHHHH
Confidence 4 12222 35899999999999985 433 466666665443
No 144
>PRK05939 hypothetical protein; Provisional
Probab=99.25 E-value=1e-09 Score=119.36 Aligned_cols=104 Identities=11% Similarity=0.111 Sum_probs=82.4
Q ss_pred HHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEecccc
Q 007454 204 RTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACAL 282 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~ 282 (603)
..+++.|+++..++.. +.++|+++|.+ +|++|.+.+.+|.||.+.|++.| ++||++|+++++|+++.
T Consensus 104 ~~l~~~G~~v~~v~~~------d~e~l~~~l~~------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a 171 (397)
T PRK05939 104 GTLRGLGVEVTMVDAT------DVQNVAAAIRP------NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMT 171 (397)
T ss_pred HHHHhcCCEEEEECCC------CHHHHHHhCCC------CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcc
Confidence 4456778888887652 67888888853 68999999999999999999855 58999999999999998
Q ss_pred CCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeC
Q 007454 283 GPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKK 322 (603)
Q Consensus 283 ~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk 322 (603)
.|. .++...+++|+++.|++|+||++-..+|..++.+
T Consensus 172 ~~~---~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~ 208 (397)
T PRK05939 172 SPW---LFRPKDVGASLVINSLSKYIAGHGNALGGAVTDT 208 (397)
T ss_pred ccc---ccCccccCCEEEEecCeecccCCCCeEEEEEecC
Confidence 875 4666667899999999999985211246665543
No 145
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.24 E-value=1e-09 Score=119.14 Aligned_cols=148 Identities=11% Similarity=0.120 Sum_probs=98.2
Q ss_pred HHHHHHHHHHcC------CCC-CcEEEeccCc-h---------------------HHHHHHHHHHcCCEEEEEeccCC-c
Q 007454 173 SAMKKRIMDFLN------ISE-NDYVYDYESE-A---------------------VEAMIRTSEKRGARVMSAEFSWP-R 222 (603)
Q Consensus 173 ~~aR~~Ia~~ln------a~~-~e~vf~~es~-s---------------------V~~~~~~a~~~Ga~V~~~~~~~~-~ 222 (603)
.+.|+.|+++++ +++ ++++.+..+. + -.+....++..|+++..++++.. .
T Consensus 72 ~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~ 151 (399)
T PRK07681 72 QEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKEND 151 (399)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCC
Confidence 368888888875 577 6786653321 1 11223445677999999988632 2
Q ss_pred cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEecccc----CCCCCCC-CCCC
Q 007454 223 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL----GPKDMDS-FGLS 293 (603)
Q Consensus 223 g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq~----~~~~m~~-ldls 293 (603)
..++.++|++.+.. +++++.+..-+|.||.++|.+ ++++|+++|++|++|-+.. .++...+ +.+.
T Consensus 152 ~~~d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~ 225 (399)
T PRK07681 152 FLPDLELIPEEIAD------KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVP 225 (399)
T ss_pred CcCCHHHHHHhccc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCC
Confidence 35788999887753 578888887799999999964 2346899999999998743 1221001 1111
Q ss_pred -CCCCcEEEEcccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 294 -LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 294 -~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
.....+++-|+.|.|| ..| +|.++..+++++.+
T Consensus 226 ~~~~~~i~~~S~SK~~~--~~GlRiG~~i~~~~l~~~~ 261 (399)
T PRK07681 226 GAKEVGVEINSLSKSYS--LAGSRIGYMIGNEEIVRAL 261 (399)
T ss_pred CCcccEEEEeecccccC--CccceeEEEecCHHHHHHH
Confidence 1123577889999999 447 89998766654333
No 146
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.24 E-value=8e-10 Score=119.80 Aligned_cols=135 Identities=13% Similarity=0.133 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEeccCchHHHH------------------------HHHHHHcCCEEEEEeccCCcccc
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDYESEAVEAM------------------------IRTSEKRGARVMSAEFSWPRLRI 225 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~------------------------~~~a~~~Ga~V~~~~~~~~~g~i 225 (603)
...++.+++|++++|++ +-++|..-..++..+ .+.+++.|+++..+. +
T Consensus 53 p~~~~lE~~lA~l~g~~-~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-------~ 124 (385)
T PRK08574 53 PTLRPLEEALAKLEGGV-DALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-------P 124 (385)
T ss_pred ccHHHHHHHHHHHhCCC-cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-------C
Confidence 34567888999999863 334443211222221 222234455555442 2
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcc
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSF 304 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~ 304 (603)
+.++|+++|.. .+|++|.+...+|.||.++|++.| ++|+++|++|++|.++..|....++ .+++|++++|+
T Consensus 125 d~~~l~~~i~~-----~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l---~~GaDivv~S~ 196 (385)
T PRK08574 125 STEDIIEAIKE-----GRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL---RHGADFVVHSL 196 (385)
T ss_pred CHHHHHHhcCc-----cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh---hhCCcEEEeeC
Confidence 46778887752 258999999999999999999955 6899999999999998877521233 46899999999
Q ss_pred cccCCCCCCc-e-EEEEEe
Q 007454 305 YQIFGENPSG-F-GCLFVK 321 (603)
Q Consensus 305 hK~fG~~P~G-~-G~L~vk 321 (603)
+|++|+ |.+ + |+++.+
T Consensus 197 sK~l~g-~~d~~gG~vi~~ 214 (385)
T PRK08574 197 TKYIAG-HNDVVGGVAVAW 214 (385)
T ss_pred ceeecC-CCCceeEEEEEC
Confidence 999985 544 3 445554
No 147
>PLN02509 cystathionine beta-lyase
Probab=99.24 E-value=6.1e-10 Score=123.14 Aligned_cols=105 Identities=17% Similarity=0.147 Sum_probs=81.9
Q ss_pred HHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEecccc
Q 007454 204 RTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACAL 282 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~ 282 (603)
....+.|+++..++. .+.++|+++|. ++|+++.+...+|.+|.+.|++.| ++|+++|+.|++|.++.
T Consensus 190 ~~l~~~G~~v~~vd~------~d~e~l~~ai~------~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a 257 (464)
T PLN02509 190 QVVPRSGVVVKRVNT------TNLDEVAAAIG------PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIM 257 (464)
T ss_pred HHHHHCCeEEEEeCC------CCHHHHHHhCC------cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 344567888877653 25678888875 368999999999999999999965 58999999999999988
Q ss_pred CCCCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCC
Q 007454 283 GPKDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKST 324 (603)
Q Consensus 283 ~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~ 324 (603)
.|.. ...+ .+++|++++|++|++++ |.+ .|+++++++.
T Consensus 258 ~~~~--~~pl-~~gaDivv~S~tK~l~G-~gdv~gG~v~~~~~~ 297 (464)
T PLN02509 258 SPVL--SRPL-ELGADIVMHSATKFIAG-HSDVMAGVLAVKGEK 297 (464)
T ss_pred cccc--CChh-hcCCcEEEecCcccccC-CCccceeEEEeccHH
Confidence 8752 2222 36899999999999986 666 6777776543
No 148
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.24 E-value=1.1e-09 Score=118.18 Aligned_cols=124 Identities=19% Similarity=0.193 Sum_probs=88.1
Q ss_pred HHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEE
Q 007454 199 VEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILI 277 (603)
Q Consensus 199 V~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlv 277 (603)
+..+.+.+.--|..++.++.+ ++++++.++|+++|..........-+|+.++-+-.||.+=|++.|. +|++++.++||
T Consensus 151 H~S~~Kaa~~lGlg~~~I~~~-~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHV 229 (373)
T PF00282_consen 151 HYSIEKAARILGLGVRKIPTD-EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHV 229 (373)
T ss_dssp -THHHHHHHHTTSEEEEE-BB-TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEE
T ss_pred ccHHHHhcceeeeEEEEecCC-cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeee
Confidence 334455666678889999998 5899999999999875322122344788899999999999999664 89999999999
Q ss_pred eccccCC----CCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 007454 278 DACALGP----KDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKST 324 (603)
Q Consensus 278 DAaq~~~----~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~ 324 (603)
|||-.+. ..+..++...-++|-+++++|||++. |.+.|++++|+..
T Consensus 230 DaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~-P~~~~~~l~r~~~ 279 (373)
T PF00282_consen 230 DAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGV-PYGCGVLLVRDKS 279 (373)
T ss_dssp EETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESSGG
T ss_pred cccccccccccccccccccccccccccccchhhhhcC-CccceeEEeeccc
Confidence 9964441 11123333345799999999999997 9999999999864
No 149
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.23 E-value=6e-10 Score=120.95 Aligned_cols=91 Identities=15% Similarity=0.132 Sum_probs=74.2
Q ss_pred HHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccC
Q 007454 205 TSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALG 283 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~ 283 (603)
..++.|.++..++.. +.+.|++.|. ++|+||.+...+|.||.+.|++.| ++||++|+++++|.++..
T Consensus 120 ~l~~~Gi~v~~v~~~------~~e~l~~~l~------~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 120 ILKGFGIETTYYDPM------IGEGIRELIR------PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred hhhhcceEEEEECCC------CHHHHHHhcC------cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 445678888876542 3567888775 369999999999999999999955 689999999999999988
Q ss_pred CCCCCCCCCCCCCCcEEEEcccccCCC
Q 007454 284 PKDMDSFGLSLVRPDFLICSFYQIFGE 310 (603)
Q Consensus 284 ~~~m~~ldls~~~~Dflv~S~hK~fG~ 310 (603)
|....|+ .+++|+++.|.|||+++
T Consensus 188 p~~~~Pl---~~GaDivv~S~tK~l~G 211 (394)
T PRK09028 188 PINSRPF---EMGVDISIQAATKYIVG 211 (394)
T ss_pred cccCCcc---ccCceEEEEeCCeEecC
Confidence 8522344 57999999999999976
No 150
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.23 E-value=3e-09 Score=124.80 Aligned_cols=222 Identities=17% Similarity=0.077 Sum_probs=143.1
Q ss_pred EEEeC-ccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccc-----CCCCCCceEEEE
Q 007454 247 FVFPL-HSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQI-----FGENPSGFGCLF 319 (603)
Q Consensus 247 v~~~~-~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~-----fG~~P~G~G~L~ 319 (603)
+++.. ..|..|.+.++..+ +++|++|++++++|-.+... ....-.++++|+++.+.++| ||+ | +.|++.
T Consensus 196 ~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~--ll~~Pge~GaDi~vg~~q~fg~p~g~GG-P-~aG~~a 271 (939)
T TIGR00461 196 FGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALT--LLTPPGHYGADIVLGSSQRFGVPMGYGG-P-HAAFFA 271 (939)
T ss_pred EEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhC--CcCCHHHcCCcEEeeCCCccCCCCCCCC-C-ceeeee
Confidence 44444 44999999999855 68999999999987554443 34555678999998888886 566 5 699999
Q ss_pred EeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHh
Q 007454 320 VKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVR 399 (603)
Q Consensus 320 vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~ 399 (603)
+|+.....|....+|=+++ ....+.+-. .+++.+ .+-+ .|-+|.|+-..-+|- ++.
T Consensus 272 ~~~~l~r~lPgrivG~s~D-~~G~~~~~l-------~LqtRe-qhIr--RekAtSNICt~qaL~-------------a~~ 327 (939)
T TIGR00461 272 VKDEYNRKMPGRIVGVSKD-ALGNTALRL-------ALQTRE-QHIR--RDKATSNICTAQVLL-------------ANV 327 (939)
T ss_pred ecHhhHhhCCCCceeEEec-CCCCcccee-------eccccc-cccc--ccccCcchhHHHHHH-------------HHH
Confidence 9998877776655541211 110000000 011110 1222 478998887654442 221
Q ss_pred hhhhhhhhhhccCCCCCCCchhHHHH--HHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCC
Q 007454 400 RAEADSIQQKNANTNGGGGSEIECRG--LDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDR 477 (603)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~a--ld~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~r 477 (603)
++ +.++-..||.+|.+|+..++.+|.++|.+. | +++..+ .-
T Consensus 328 ------------------------a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~------G---~~~~~~----~f 370 (939)
T TIGR00461 328 ------------------------ASSYCVYHGPKGLKNIARRIHSLTSILANGLEND------P---HELINK----TW 370 (939)
T ss_pred ------------------------HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC------C---CcccCC----Cc
Confidence 23 233334479999999999999999999874 3 344333 12
Q ss_pred CCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEE
Q 007454 478 GPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVV 557 (603)
Q Consensus 478 g~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~V 557 (603)
-.++.+.+.+. +.+.+.+.+.++||.+|.. ..+.|
T Consensus 371 F~~~~v~~~~~-----~~~~i~~~~~~~gi~l~~~----------------------------------------~~~~i 405 (939)
T TIGR00461 371 FDTLTVKVGNG-----ISSELLKAAEEFNINLRAV----------------------------------------DTTTV 405 (939)
T ss_pred cceEEEEeCCC-----CHHHHHHHHHHCCCeeeec----------------------------------------CCCEE
Confidence 34666666321 2333444445679987631 01489
Q ss_pred EEecCCCCCHHHHHHHHHHHH
Q 007454 558 TASLGYLANFEDVYRLWAFVA 578 (603)
Q Consensus 558 R~Slg~~tt~eDVd~l~~~l~ 578 (603)
++|+.-++|.+||+.|++.+.
T Consensus 406 ~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 406 GIALDETTTKADVENLLKVFD 426 (939)
T ss_pred EEEeecCCCHHHHHHHHHHhc
Confidence 999999999999999999985
No 151
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.23 E-value=8.4e-10 Score=116.84 Aligned_cols=144 Identities=13% Similarity=0.191 Sum_probs=93.2
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCc-hHHHHHHHHHHcCCEEEEEeccCCc---------ccc----CHHHHHHHHhhcC
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESE-AVEAMIRTSEKRGARVMSAEFSWPR---------LRI----NSEKLRKMVVSKG 238 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~-sV~~~~~~a~~~Ga~V~~~~~~~~~---------g~i----~~~~L~~~l~~~~ 238 (603)
.+.|+.|++++|+++++++++..+. ++..+... -..| +|......+.. .++ +.++|++.+.
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~d~~~l~~~~~--- 124 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELPDLDRLPAALE--- 124 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeCCHHHHHhhcc---
Confidence 6899999999999999998876543 22222222 1234 44333221110 000 5777877763
Q ss_pred CCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEecccc--CCCCCCC-CCC-CCCCCcEEEEcccccCCC
Q 007454 239 KKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACAL--GPKDMDS-FGL-SLVRPDFLICSFYQIFGE 310 (603)
Q Consensus 239 ~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq~--~~~~m~~-ldl-s~~~~Dflv~S~hK~fG~ 310 (603)
+++++.+...+|.||.++|.+.+ ..|+++|++|++|.+.. .+. .+ .++ ...+-++++.|+.|.||.
T Consensus 125 ----~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~i~~~S~SK~~g~ 198 (330)
T TIGR01140 125 ----ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD--ASLAPQAARFPGLVVLRSLTKFFGL 198 (330)
T ss_pred ----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc--cchhhHhccCCCEEEEEecchhhcC
Confidence 35688888889999999997633 35788999999999853 322 11 111 123456899999999994
Q ss_pred CCCc--eEEEEEeCCCCcCcC
Q 007454 311 NPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 311 ~P~G--~G~L~vkk~~~~~L~ 329 (603)
.| +|.++++++.++.+.
T Consensus 199 --~G~R~G~i~~~~~~~~~l~ 217 (330)
T TIGR01140 199 --AGLRLGFVVAHPALLARLR 217 (330)
T ss_pred --chhhhhheeCCHHHHHHHH
Confidence 36 599998877654443
No 152
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.23 E-value=6e-09 Score=114.42 Aligned_cols=88 Identities=11% Similarity=0.126 Sum_probs=70.3
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcc
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSF 304 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~ 304 (603)
+.++|++.|.+ ++++|.+...+|.||.+.|++.| ++|+++|++|++|.++..|.. .+.-.+++|+++.|+
T Consensus 132 d~e~le~ai~~------~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~---~~p~~~gaDivv~S~ 202 (425)
T PRK06084 132 DIAALEALIDE------RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVL---CRPFEHGADIVVHSL 202 (425)
T ss_pred CHHHHHHHhcc------CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc---CChhhcCCCEEEECc
Confidence 67888888863 68899999999999999999865 589999999999999987752 222256899999999
Q ss_pred cccCCCCCCceEEEEEeC
Q 007454 305 YQIFGENPSGFGCLFVKK 322 (603)
Q Consensus 305 hK~fG~~P~G~G~L~vkk 322 (603)
+|++|++-..+|..++.+
T Consensus 203 tK~l~G~g~~~gG~v~~~ 220 (425)
T PRK06084 203 TKYIGGHGTSIGGIVVDS 220 (425)
T ss_pred hhcccccccceeEEEEeC
Confidence 999986223467777753
No 153
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.22 E-value=1.2e-09 Score=117.84 Aligned_cols=113 Identities=11% Similarity=0.069 Sum_probs=80.3
Q ss_pred HHHHHcCCEEEEEeccCC-ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEe
Q 007454 204 RTSEKRGARVMSAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILID 278 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~~-~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvD 278 (603)
..++..|++|..++.+.. ...++.++|++.+.. +++++.+...+|.||..+|.+ +++.|+++|+++++|
T Consensus 130 ~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D 203 (383)
T TIGR03540 130 IGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK------KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHD 203 (383)
T ss_pred HHHHhcCCEEEEEecCcccCCccCHHHHHhhccc------cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEe
Confidence 345667999998887632 245788999888753 578888888899999999963 345789999999999
Q ss_pred cccc----CCCCCCCCCCCC----CCCcEEEEcccccCCCCCCc--eEEEEEeCCCCc
Q 007454 279 ACAL----GPKDMDSFGLSL----VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVP 326 (603)
Q Consensus 279 Aaq~----~~~~m~~ldls~----~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~ 326 (603)
-+.. .++ ....+.. ....+++.||=|.|| ..| +|.++..+++++
T Consensus 204 e~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~g--~~GlRiG~~i~~~~l~~ 257 (383)
T TIGR03540 204 NAYSEITFDGY--KAPSFLEVDGAKDVGIEFHSLSKTYN--MTGWRIGMAVGNADLIA 257 (383)
T ss_pred cchhhhccCCC--CCcCcccCCCcccCEEEEEecccccC--CccceeeEEeCCHHHHH
Confidence 9753 232 1222221 124467788999999 558 999987665543
No 154
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.22 E-value=1.3e-08 Score=110.33 Aligned_cols=221 Identities=10% Similarity=0.094 Sum_probs=137.8
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCC--CCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKD--MDSFGLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~--m~~ldls~~~~ 297 (603)
+.++|++.+.. +++++|.+....|.||.++| ++.+ ++|+++|+++++|-++. .+.+ +...+.....|
T Consensus 166 d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~p 240 (400)
T PTZ00125 166 DVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKP 240 (400)
T ss_pred CHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCC
Confidence 68889888852 35888888778899999998 7755 58999999999999864 3321 11233345578
Q ss_pred cEEEEcccccCCCCC-CceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCCh
Q 007454 298 DFLICSFYQIFGENP-SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTF 376 (603)
Q Consensus 298 Dflv~S~hK~fG~~P-~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~ 376 (603)
|++++| |.++. + ..+|++++++++++.+.....+.+ + .+ +.
T Consensus 241 d~~~~s--K~l~~-g~~~ig~v~~~~~~~~~~~~~~~~~t--------------------------------~-~~--~~ 282 (400)
T PTZ00125 241 DIVLLG--KALSG-GLYPISAVLANDDVMLVIKPGEHGST--------------------------------Y-GG--NP 282 (400)
T ss_pred CEEEEc--ccccC-CCcCcEEEEEcHHHHhhccCCCCCCC--------------------------------C-Cc--CH
Confidence 999987 98873 3 258999999887655542111000 0 11 11
Q ss_pred hhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCC
Q 007454 377 SGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQ 456 (603)
Q Consensus 377 ~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~ 456 (603)
....+. .++++.+.+-+ +.++.+.+.+++.++|.++.
T Consensus 283 ~~~~aa----------------------------------------~~~l~~i~~~~---~~~~~~~~~~~l~~~l~~l~ 319 (400)
T PTZ00125 283 LACAVA----------------------------------------VEALEVLKEEK---LAENAQRLGEVFRDGLKELL 319 (400)
T ss_pred HHHHHH----------------------------------------HHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHH
Confidence 111111 14677665433 34566667777777776652
Q ss_pred CCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhc
Q 007454 457 HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDR 536 (603)
Q Consensus 457 h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~ 536 (603)
. ..+.+... ...|.++.+.++..++. ....+.++|. ++||.+..+
T Consensus 320 ~----~~~~~~~~-----~~~g~~~~v~~~~~~~~-~~~~~~~~l~-~~Gv~v~~~------------------------ 364 (400)
T PTZ00125 320 K----KSPWVKEI-----RGKGLLNAIVFDHSDGV-NAWDLCLKLK-ENGLLAKPT------------------------ 364 (400)
T ss_pred h----cCCCeEEE-----ecccEEEEEEEccCcch-HHHHHHHHHH-HCCeEEeec------------------------
Confidence 1 01222111 12466777766542221 1223344554 568887421
Q ss_pred ccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 537 EAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
....||+++.+..|.+||+++++.|.+++++
T Consensus 365 ----------------~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 365 ----------------HDNIIRFAPPLVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred ----------------CCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 1148999999999999999999999998865
No 155
>PRK07337 aminotransferase; Validated
Probab=99.21 E-value=2e-09 Score=116.38 Aligned_cols=187 Identities=11% Similarity=0.055 Sum_probs=116.2
Q ss_pred CCceeeecCCCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHc--
Q 007454 107 SNHTCLDYFGIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL-- 183 (603)
Q Consensus 107 ~~~vYLDyaa~tl-~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~l-- 183 (603)
.+.++|+.+...+ .++.+.+++.+.+... ...| ..+ .-..+.|+.|++++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~Y------------~~~-----------~g~~~lr~~ia~~~~~ 82 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRG----VTQY------------TSA-----------LGLAPLREAIAAWYAR 82 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcC----CCCC------------CCC-----------CCCHHHHHHHHHHHHH
Confidence 4568999887764 4666777765543210 0001 100 01246788888876
Q ss_pred --C--CCCCcEEEeccCc-hHH---------------------HHHHHHHHcCCEEEEEeccC-CccccCHHHHHHHHhh
Q 007454 184 --N--ISENDYVYDYESE-AVE---------------------AMIRTSEKRGARVMSAEFSW-PRLRINSEKLRKMVVS 236 (603)
Q Consensus 184 --n--a~~~e~vf~~es~-sV~---------------------~~~~~a~~~Ga~V~~~~~~~-~~g~i~~~~L~~~l~~ 236 (603)
| +++++++++..+. ++. .....++..|+++..++.+. .+..++.++|++.+..
T Consensus 83 ~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (388)
T PRK07337 83 RFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE 162 (388)
T ss_pred HhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc
Confidence 3 5778886653321 111 11233456688888888763 2357899999988863
Q ss_pred cCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEecc-ccCCCCCCCCCCCCCCCcEE-EEcccccCCC
Q 007454 237 KGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDAC-ALGPKDMDSFGLSLVRPDFL-ICSFYQIFGE 310 (603)
Q Consensus 237 ~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAa-q~~~~~m~~ldls~~~~Dfl-v~S~hK~fG~ 310 (603)
+++++.++.-+|.||..++.+ +++.|+++|+++++|-+ +....+-.+.....+..+.+ +.|+.|.||.
T Consensus 163 ------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 236 (388)
T PRK07337 163 ------RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNM 236 (388)
T ss_pred ------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCC
Confidence 578899999999999999964 23468899999999964 21211001222223345665 5699999984
Q ss_pred CCCc--eEEEEEeCCCCcCc
Q 007454 311 NPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 311 ~P~G--~G~L~vkk~~~~~L 328 (603)
.| +|.+++.+++++.+
T Consensus 237 --~G~RiG~~~~~~~l~~~l 254 (388)
T PRK07337 237 --TGWRLGWLVVPEALVGTF 254 (388)
T ss_pred --chhheeeeecCHHHHHHH
Confidence 37 89998876554333
No 156
>PRK07550 hypothetical protein; Provisional
Probab=99.21 E-value=1.9e-09 Score=116.38 Aligned_cols=118 Identities=12% Similarity=0.126 Sum_probs=78.1
Q ss_pred HHHHcCCEEEEEeccC-CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEec
Q 007454 205 TSEKRGARVMSAEFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDA 279 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~-~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDA 279 (603)
.++..|+++..++.+. .+..++.++|++.+.. +++++.+..-+|.||.++|.+ +++.|+++|++|++|.
T Consensus 130 ~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd 203 (386)
T PRK07550 130 WLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP------RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDE 203 (386)
T ss_pred HHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc------cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEec
Confidence 3466788988888752 2456789999998863 467777777889999999964 2346889999999999
Q ss_pred cccCCC-C-CCCCCC-C--CCC-CcEEEEcccccCCCCCCceEEEEEeCCCCcCc
Q 007454 280 CALGPK-D-MDSFGL-S--LVR-PDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 328 (603)
Q Consensus 280 aq~~~~-~-m~~ldl-s--~~~-~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L 328 (603)
+-..-. + -.+..+ + ..+ -.+++.|+.|.||.+--.+|+++..++.+..+
T Consensus 204 ~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~ 258 (386)
T PRK07550 204 TYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEI 258 (386)
T ss_pred cchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHH
Confidence 732100 0 001111 1 111 24678999999984212389998876654433
No 157
>PRK08363 alanine aminotransferase; Validated
Probab=99.21 E-value=1.8e-09 Score=117.07 Aligned_cols=141 Identities=15% Similarity=0.142 Sum_probs=90.6
Q ss_pred HHHHHHHHHHc------CCCCCcEEEeccCc-hHHH---------------------HHHHHHHcCCEEEEE-eccCCcc
Q 007454 173 SAMKKRIMDFL------NISENDYVYDYESE-AVEA---------------------MIRTSEKRGARVMSA-EFSWPRL 223 (603)
Q Consensus 173 ~~aR~~Ia~~l------na~~~e~vf~~es~-sV~~---------------------~~~~a~~~Ga~V~~~-~~~~~~g 223 (603)
.+.|+.|++++ ++++++++++..+. ++.. ....++..|.++..+ +.+..+.
T Consensus 73 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~ 152 (398)
T PRK08363 73 PELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGW 152 (398)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCC
Confidence 46788888876 36788887764321 2111 223445567777666 3432234
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc---HH-HHHHHHhCCcEEEEeccccC----CCCCCC-CCCCC
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG----PKDMDS-FGLSL 294 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p---l~-~i~~a~e~g~~vlvDAaq~~----~~~m~~-ldls~ 294 (603)
.++.++|++.+.. +++++.++..+|.||..+| ++ +++.|+++|+++++|.+-.. +.. .+ ..+..
T Consensus 153 ~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~-~~~~~~~~ 225 (398)
T PRK08363 153 QPDIDDIRKKITE------KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKH-VSPGSLTK 225 (398)
T ss_pred cCCHHHHHhhCCc------ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcc-cCHHHcCc
Confidence 6788888888753 5789999999999999999 44 33578999999999997321 110 01 11111
Q ss_pred CCCcEEEEcccccCCCCCCceEEEEE
Q 007454 295 VRPDFLICSFYQIFGENPSGFGCLFV 320 (603)
Q Consensus 295 ~~~Dflv~S~hK~fG~~P~G~G~L~v 320 (603)
..-=+++.||.|+|+.+.-++|++++
T Consensus 226 ~~~vi~~~SfSK~~~~~GlRiG~~~~ 251 (398)
T PRK08363 226 DVPVIVMNGLSKVYFATGWRLGYIYF 251 (398)
T ss_pred CCcEEEEecchhccCCccceEEEEEE
Confidence 11125567999998764445899887
No 158
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.20 E-value=1.4e-09 Score=115.88 Aligned_cols=112 Identities=15% Similarity=0.153 Sum_probs=77.6
Q ss_pred HHHHHcCCEEEEEeccC-CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccH---H-HHHHHHhCCcEEEEe
Q 007454 204 RTSEKRGARVMSAEFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILID 278 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~-~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl---~-~i~~a~e~g~~vlvD 278 (603)
..++..|+++..++.+. .+..++.+++++++.. +++++.++.-+|.||..+|. + +++.|+++|+++++|
T Consensus 102 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~D 175 (350)
T TIGR03537 102 RGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE------ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSD 175 (350)
T ss_pred HHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh------ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEe
Confidence 33455688888887752 2345799999998864 57899999999999999994 4 335789999999999
Q ss_pred cccc---CCCCCCCCCCCCCCCc--EEEEcccccCCCCCCc--eEEEEEeCCCC
Q 007454 279 ACAL---GPKDMDSFGLSLVRPD--FLICSFYQIFGENPSG--FGCLFVKKSTV 325 (603)
Q Consensus 279 Aaq~---~~~~m~~ldls~~~~D--flv~S~hK~fG~~P~G--~G~L~vkk~~~ 325 (603)
.+.. .++ .+..+..+..| +++.|+.|.||. .| +|+++..+.+.
T Consensus 176 e~y~~~~~~~--~~~~~~~~~~~~~i~~~s~SK~~g~--~GlRiG~~~~~~~~~ 225 (350)
T TIGR03537 176 ECYTEIYFGE--PPHSALEVGIENVLAFHSLSKRSGM--TGYRSGFVAGDEKLI 225 (350)
T ss_pred ccccccccCC--CCCchhhcCcCCEEEEeecccccCC--ccccceeeecCHHHH
Confidence 9853 222 12222222233 677799999984 47 78776554443
No 159
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.20 E-value=1.3e-09 Score=116.35 Aligned_cols=146 Identities=10% Similarity=0.129 Sum_probs=99.3
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCc-----------------------hHHHHHHHHHHcCCEEEEEeccCCccccCHHH
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESE-----------------------AVEAMIRTSEKRGARVMSAEFSWPRLRINSEK 229 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~-----------------------sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~ 229 (603)
.+.|+.+++++|+++++++++..+. +-......++..|+++..++.+ ++..++.++
T Consensus 60 ~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~-~~~~~d~~~ 138 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTL-DNWQLDLPA 138 (351)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecC-CCCCCCHHH
Confidence 4788899999999999997653221 1112234456779999988886 356788999
Q ss_pred HHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHh--CCcEEEEeccc--cCCCCCCCCC-CCCCCCcEEEEc
Q 007454 230 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQE--NDWHILIDACA--LGPKDMDSFG-LSLVRPDFLICS 303 (603)
Q Consensus 230 L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e--~g~~vlvDAaq--~~~~~m~~ld-ls~~~~Dflv~S 303 (603)
|++.+. +++++.+..-+|.||..++.+.+. +++. .+.+|++|-+- +.+.. ..++ +....-=+++-|
T Consensus 139 l~~~~~-------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~-s~~~~~~~~~n~iv~rS 210 (351)
T PRK01688 139 IADNLD-------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQA-SLAGWLAEYPHLVILRT 210 (351)
T ss_pred HHHhcc-------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCC-ChHHHHhhCCCEEEEec
Confidence 988763 588999999999999999998553 4432 25789999873 22210 0111 122222367889
Q ss_pred ccccCCCCCCc--eEEEEEeCCCCcCcC
Q 007454 304 FYQIFGENPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 304 ~hK~fG~~P~G--~G~L~vkk~~~~~L~ 329 (603)
|.|+|| ..| +|.++.++++++.+.
T Consensus 211 fSK~~g--laGlRiGy~i~~~~~i~~l~ 236 (351)
T PRK01688 211 LSKAFA--LAGLRCGFTLANEEVINLLL 236 (351)
T ss_pred chHhhc--CHHHHHhHHhCCHHHHHHHH
Confidence 999999 557 499888777655444
No 160
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.19 E-value=1.6e-08 Score=108.45 Aligned_cols=266 Identities=11% Similarity=0.117 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEecc-CchHHHHHHHHHH-------cCCEEEEEeccCC--------------------
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDYE-SEAVEAMIRTSEK-------RGARVMSAEFSWP-------------------- 221 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~e-s~sV~~~~~~a~~-------~Ga~V~~~~~~~~-------------------- 221 (603)
....+..+++++++|.+ ++++... ++++...+..++. .|.+|......+.
T Consensus 69 ~~~~~l~~~la~~~g~~--~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~ 146 (379)
T TIGR00707 69 EPQEELAEKLVEHSGAD--RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFE 146 (379)
T ss_pred HHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCC
Confidence 45667888999999874 5555443 3444444444421 1456665432110
Q ss_pred ----cccc----CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccc-cc---HHHH-HHHHhCCcEEEEecccc-CCCC-
Q 007454 222 ----RLRI----NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGAR-YP---YLWM-RIAQENDWHILIDACAL-GPKD- 286 (603)
Q Consensus 222 ----~g~i----~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~-~p---l~~i-~~a~e~g~~vlvDAaq~-~~~~- 286 (603)
+... +.++|++.+.. +++++.+...+|.+|.. .+ ++.+ ++|+++|+++++|.++. .+.+
T Consensus 147 ~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g 220 (379)
T TIGR00707 147 PLVPGFSYAPYNDIESLKKAIDD------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG 220 (379)
T ss_pred CCCCCceeeCCCCHHHHHHHhhh------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc
Confidence 0111 67888887753 57888888888888875 34 4433 47899999999999875 3221
Q ss_pred -CCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCccc
Q 007454 287 -MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKS 365 (603)
Q Consensus 287 -m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 365 (603)
..+++.....+|+++ +.|.|| +...+|+++.++++++.+.+...+ .
T Consensus 221 ~~~~~~~~~~~~d~~t--~sK~~~-~G~riG~~~~~~~~~~~~~~~~~~-~----------------------------- 267 (379)
T TIGR00707 221 KFFAYEHYGIEPDIIT--LAKGLG-GGVPIGATLAKEEVAEAFTPGDHG-S----------------------------- 267 (379)
T ss_pred hhhhHHhcCCCCCEEE--Eccccc-CCcccEEEEEcHHHHhhhcCCCCC-C-----------------------------
Confidence 012223334678765 569998 344589999887776555431100 0
Q ss_pred ccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHH
Q 007454 366 KQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLI 445 (603)
Q Consensus 366 ~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~ 445 (603)
--+ .|..+..+.. ++|++++. ..+.++.+.++
T Consensus 268 ----~~~-~~~~~~~aa~----------------------------------------aaL~~~~~---~~~~~~~~~~~ 299 (379)
T TIGR00707 268 ----TFG-GNPLACAAAL----------------------------------------AVLEVIEK---ERLLENVKEKG 299 (379)
T ss_pred ----CCC-CCHHHHHHHH----------------------------------------HHHHHHHh---hhHHHHHHHHH
Confidence 001 1222222211 46666543 34667788888
Q ss_pred HHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhh
Q 007454 446 NWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQK 525 (603)
Q Consensus 446 ~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~ 525 (603)
+++.++|.++.. . .. + .+ . ...|.++.+.+.+. ...+.+.+.++||.++.+
T Consensus 300 ~~~~~~l~~~~~-~---~~-~---~~-~-~~~g~~~~~~~~~~------~~~~~~~l~~~Gv~v~~~------------- 350 (379)
T TIGR00707 300 DYFKERLEELGK-N---YP-N---KE-V-RGKGLMLGIELEAP------CKDIVKKALEKGLLVNCA------------- 350 (379)
T ss_pred HHHHHHHHHHHh-h---CC-C---Cc-c-ccCceEEEEEecCc------HHHHHHHHHHCCcEEeeC-------------
Confidence 888888876521 0 00 1 11 1 12456777776541 234555566789988631
Q ss_pred hhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 007454 526 EKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 580 (603)
Q Consensus 526 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~ 580 (603)
+ .+.||+|+++..|.||++++++.|++.
T Consensus 351 ------------------------~---~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 351 ------------------------G---PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred ------------------------C---CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 1 158999999999999999999999865
No 161
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.18 E-value=3e-10 Score=123.72 Aligned_cols=106 Identities=17% Similarity=0.178 Sum_probs=80.0
Q ss_pred HHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhC--CcEEEEecccc
Q 007454 206 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQEN--DWHILIDACAL 282 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~--g~~vlvDAaq~ 282 (603)
++..|+++..++.. +.++|++.|.. +|+++.+...+|.||.+.|++.| ++|+++ |+.|++|.+..
T Consensus 124 ~~~~G~~v~~vd~~------d~e~l~~~i~~------~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~ 191 (400)
T PRK06234 124 LTRYGVEVTFVDTS------NLEEVRNALKA------NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFC 191 (400)
T ss_pred HhhCCeEEEEECCC------CHHHHHHHhcc------CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 44566666666542 57888888863 68999999999999999999855 588986 99999999977
Q ss_pred CCCCCCCCCCCCCCCcEEEEcccccCCCCCCc---eEEEEEeCCCCcCc
Q 007454 283 GPKDMDSFGLSLVRPDFLICSFYQIFGENPSG---FGCLFVKKSTVPIL 328 (603)
Q Consensus 283 ~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G---~G~L~vkk~~~~~L 328 (603)
.+..-.++ .+++|+++.|++|+||+ | | .|+++.+++..+.+
T Consensus 192 ~~~~~~~l---~~g~Divv~S~sK~l~g-~-g~~~gG~v~~~~~~~~~l 235 (400)
T PRK06234 192 TPYIQRPL---QLGADVVVHSATKYLNG-H-GDVIAGFVVGKEEFINQV 235 (400)
T ss_pred chhcCCch---hhCCcEEEeeccccccC-C-CCceeEEEEecHHHHHHH
Confidence 66521233 34799999999999984 3 5 58888877654433
No 162
>PRK07682 hypothetical protein; Validated
Probab=99.18 E-value=2.1e-09 Score=115.65 Aligned_cols=149 Identities=13% Similarity=0.196 Sum_probs=96.6
Q ss_pred HHHHHHHHHHcC------CCCC-cEEEeccCc-hHHH---------------------HHHHHHHcCCEEEEEeccCC-c
Q 007454 173 SAMKKRIMDFLN------ISEN-DYVYDYESE-AVEA---------------------MIRTSEKRGARVMSAEFSWP-R 222 (603)
Q Consensus 173 ~~aR~~Ia~~ln------a~~~-e~vf~~es~-sV~~---------------------~~~~a~~~Ga~V~~~~~~~~-~ 222 (603)
.+.|+.|+++++ ++++ +++++..+. ++.. ....++..|+++..++.++. +
T Consensus 60 ~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 139 (378)
T PRK07682 60 LELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENE 139 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccC
Confidence 367777777774 4554 687654321 2211 22334556778777776532 3
Q ss_pred cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEeccccCCC---CCCCC-CCCC
Q 007454 223 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDACALGPK---DMDSF-GLSL 294 (603)
Q Consensus 223 g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDAaq~~~~---~m~~l-dls~ 294 (603)
..++.++|++++.. +++++.+..-+|.||..+|.+. +..|+++++++++|.+...-. ...++ .+..
T Consensus 140 ~~~d~~~l~~~~~~------~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 213 (378)
T PRK07682 140 FKVQPAQIEAAITA------KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKG 213 (378)
T ss_pred CCCCHHHHHhhcCc------ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhccc
Confidence 46889999988753 5778878778999999998652 246789999999998743211 00011 1111
Q ss_pred -CCCcEEEEcccccCCCCCCc--eEEEEEeCCCCcCcC
Q 007454 295 -VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 295 -~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~ 329 (603)
..-.+++.|+-|.||. .| +|.++..+++++.+.
T Consensus 214 ~~~~~i~~~S~SK~~~~--~GlR~G~~~~~~~~i~~l~ 249 (378)
T PRK07682 214 MRERTILISGFSKGFAM--TGWRLGFIAAPVYFSEAML 249 (378)
T ss_pred ccCCEEEEecCcccccC--hhhhhhhhhcCHHHHHHHH
Confidence 2346899999999994 47 899998777655443
No 163
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.18 E-value=3.7e-09 Score=114.59 Aligned_cols=118 Identities=15% Similarity=0.226 Sum_probs=83.0
Q ss_pred HHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEec
Q 007454 204 RTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDA 279 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDA 279 (603)
..++..|.++..++.+..+..++.++|++++... +++++++.+..-+|.||..++.+. ++.|+++++++++|.
T Consensus 130 ~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~ 206 (391)
T PRK07309 130 PIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQ---GDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDE 206 (391)
T ss_pred HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhcc---CCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEc
Confidence 3456679999998876334578999999988631 135788888888999999999542 346789999999999
Q ss_pred cccC----CCCCCCCCCCCCCCc--EEEEcccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 280 CALG----PKDMDSFGLSLVRPD--FLICSFYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 280 aq~~----~~~m~~ldls~~~~D--flv~S~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
+... +. ...++..+..| +++.|+.|.||. .| +|.++..+++++.+
T Consensus 207 ~y~~~~~~~~--~~~~~~~~~~~~~i~~~S~SK~~g~--~GlRvG~~v~~~~~~~~~ 259 (391)
T PRK07309 207 VYSELTYTGE--PHVSIAEYLPDQTILINGLSKSHAM--TGWRIGLIFAPAEFTAQL 259 (391)
T ss_pred cccceeeCCC--CCCCHHHhccCCEEEEecChhhccC--ccceeEEEEeCHHHHHHH
Confidence 7432 21 11222222234 888999999994 37 88898877665433
No 164
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.18 E-value=1.1e-09 Score=118.51 Aligned_cols=106 Identities=11% Similarity=0.073 Sum_probs=76.4
Q ss_pred HHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccC
Q 007454 205 TSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALG 283 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~ 283 (603)
.+++.|.++..++.+ +.++|++.+. +++++|.+...+|.+|.+.|++.| ++|+++|++|++|.++..
T Consensus 113 ~~~~~g~~v~~v~~~------d~~~l~~~i~------~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~ 180 (380)
T TIGR01325 113 ILPRFGIEVSFVDPT------DLNAWEAAVK------PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFAT 180 (380)
T ss_pred HHHHhCCEEEEECCC------CHHHHHHhcC------CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc
Confidence 344556666665542 5677777775 368999999999999999999966 589999999999999765
Q ss_pred CCCCCCCCCCCCCCcEEEEcccccCCCCCC-ce-EEEEEeCCCCc
Q 007454 284 PKDMDSFGLSLVRPDFLICSFYQIFGENPS-GF-GCLFVKKSTVP 326 (603)
Q Consensus 284 ~~~m~~ldls~~~~Dflv~S~hK~fG~~P~-G~-G~L~vkk~~~~ 326 (603)
+..-.++ .+++|+++.|++|++|+ +. .+ |+++.+++..+
T Consensus 181 ~~~~~pl---~~g~Divv~S~sK~l~g-~g~~~gG~vv~~~~~~~ 221 (380)
T TIGR01325 181 PVLQQPL---KLGADVVVYSATKHIDG-QGRVMGGVIAGSEELMA 221 (380)
T ss_pred cccCCch---hhCCCEEEeeccceecC-CCCeEEEEEEeCHHHHH
Confidence 4311233 35799999999999984 32 24 55655655433
No 165
>PRK03321 putative aminotransferase; Provisional
Probab=99.17 E-value=4.2e-09 Score=112.17 Aligned_cols=184 Identities=11% Similarity=0.113 Sum_probs=118.7
Q ss_pred CceeeecCCCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCC
Q 007454 108 NHTCLDYFGIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (603)
Q Consensus 108 ~~vYLDyaa~tl-~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~ 186 (603)
+.+.|+....+. +++.+++++.+..... ...+. .-..+.|+.|++++|++
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~-------------------~~y~~----------~g~~~lr~~ia~~~~~~ 73 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAGV-------------------NRYPD----------MGAVELRAALAEHLGVP 73 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHhc-------------------CcCCC----------CcHHHHHHHHHHHhCcC
Confidence 357788775554 5677888876542110 00110 11468999999999999
Q ss_pred CCcEEEeccCch-HHH---------------------HHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCe
Q 007454 187 ENDYVYDYESEA-VEA---------------------MIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQR 244 (603)
Q Consensus 187 ~~e~vf~~es~s-V~~---------------------~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t 244 (603)
+++++++..+.. +.. ....++..|+++..++.+ +++.++.+++++.+.. ++
T Consensus 74 ~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~~~~~~------~~ 146 (352)
T PRK03321 74 PEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLT-PDHTHDLDAMAAAITD------RT 146 (352)
T ss_pred HHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCC-CCCCCCHHHHHHhhcc------CC
Confidence 999987643221 111 112345568888888876 3577889999988853 57
Q ss_pred eEEEEeCccccccccccHHHH-HHHHh--CCcEEEEecccc----CCCCCCCCCCCCCCCcE-EEEcccccCCCCCCc--
Q 007454 245 GLFVFPLHSRMTGARYPYLWM-RIAQE--NDWHILIDACAL----GPKDMDSFGLSLVRPDF-LICSFYQIFGENPSG-- 314 (603)
Q Consensus 245 ~Lv~~~~~Sn~TG~~~pl~~i-~~a~e--~g~~vlvDAaq~----~~~~m~~ldls~~~~Df-lv~S~hK~fG~~P~G-- 314 (603)
++|.++..+|.||.++|.+.+ ++++. +++++++|.+-. .+....++..-....+. ++.|+=|.|| ..|
T Consensus 147 ~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g--~~GlR 224 (352)
T PRK03321 147 RLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYG--LAGLR 224 (352)
T ss_pred CEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhh--hHHHh
Confidence 899999999999999999854 56765 589999999732 11100111111122344 4558999999 447
Q ss_pred eEEEEEeCCCCcCcC
Q 007454 315 FGCLFVKKSTVPILV 329 (603)
Q Consensus 315 ~G~L~vkk~~~~~L~ 329 (603)
+|+++.++++++.+.
T Consensus 225 iG~~v~~~~~~~~~~ 239 (352)
T PRK03321 225 VGYAVGHPEVIAALR 239 (352)
T ss_pred hhhhcCCHHHHHHHH
Confidence 899888766654443
No 166
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.16 E-value=4.8e-09 Score=114.45 Aligned_cols=104 Identities=10% Similarity=0.083 Sum_probs=81.0
Q ss_pred HHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEecccc
Q 007454 204 RTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACAL 282 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~ 282 (603)
..+++.|+++..++.. +.++++++|.. +|++|.+...+|.||.+.|++.| ++|+++|+.|++|.++.
T Consensus 128 ~~~~~~G~~v~~vd~~------d~~~l~~ai~~------~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a 195 (403)
T PRK07810 128 EILPRWGVETVFVDGE------DLSQWEEALSV------PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFA 195 (403)
T ss_pred HHHHHcCcEEEEECCC------CHHHHHHhcCc------CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCC
Confidence 4456678888877642 67888888863 68999999999999999999955 58999999999999988
Q ss_pred CCCCCCCCCCCCCCCcEEEEcccccCCCCCCc---eEEEEEeCCC
Q 007454 283 GPKDMDSFGLSLVRPDFLICSFYQIFGENPSG---FGCLFVKKST 324 (603)
Q Consensus 283 ~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G---~G~L~vkk~~ 324 (603)
.|....++ .+++|++++|++|++|+ .| .|+++.+++.
T Consensus 196 ~~~~~~~~---~~gaDivv~S~tK~l~g--~g~~~gG~v~~~~~~ 235 (403)
T PRK07810 196 TPLLQRGL---PLGADVVVYSGTKHIDG--QGRVLGGAILGDREY 235 (403)
T ss_pred ccccCChh---hcCCcEEEccCCceecC--CcCceeEEEEeChHH
Confidence 77521233 45899999999999983 35 4767666654
No 167
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.16 E-value=3.2e-09 Score=114.77 Aligned_cols=136 Identities=13% Similarity=0.116 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEeccCchHH------------------------HHHHHHHHcCCEEEEEeccCCcccc
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDYESEAVE------------------------AMIRTSEKRGARVMSAEFSWPRLRI 225 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~es~sV~------------------------~~~~~a~~~Ga~V~~~~~~~~~g~i 225 (603)
....+.+++++++.|+.. .+++..-..++. .+.+.+++.|+++..++. .
T Consensus 50 p~~~~Le~~lA~l~g~~~-~~~~~sG~aai~~~~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~------~ 122 (377)
T PRK07671 50 PTRAALEELIAVLEGGHA-GFAFGSGMAAITAVMMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT------S 122 (377)
T ss_pred hHHHHHHHHHHHHhCCCc-eEEeCCHHHHHHHHHHHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC------C
Confidence 445678888888888743 454432211111 122233455666666543 2
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcc
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSF 304 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~ 304 (603)
+.++++++|.+ +|++|.+...+|.||.+.|++.| ++|+++|+.+++|.++..+....++ .+++|++++|+
T Consensus 123 d~~~l~~ai~~------~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~---~~g~Divv~S~ 193 (377)
T PRK07671 123 NLEEVEEAIRP------NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSPI---SLGADIVLHSA 193 (377)
T ss_pred CHHHHHHhcCC------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCChh---hhCCeEEEecC
Confidence 67888888853 68999999999999999999966 5899999999999997655411233 35889999999
Q ss_pred cccCCCCCCc-eE-EEEEeC
Q 007454 305 YQIFGENPSG-FG-CLFVKK 322 (603)
Q Consensus 305 hK~fG~~P~G-~G-~L~vkk 322 (603)
+|+||+ |.+ +| ++++++
T Consensus 194 sK~l~G-~~~~~~G~~v~~~ 212 (377)
T PRK07671 194 TKYLGG-HSDVVAGLVVVNS 212 (377)
T ss_pred cccccC-CccceeEEEEeCc
Confidence 999986 654 44 455543
No 168
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.16 E-value=5.1e-09 Score=113.42 Aligned_cols=87 Identities=16% Similarity=0.173 Sum_probs=68.4
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcc
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSF 304 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~ 304 (603)
+.++|+++|.. +|+|+.+...+|.||.+.|++.| ++|+++|++|++|.++..|. ..-.+ .+++|+++.|+
T Consensus 125 d~~~l~~ai~~------~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~--~~~pl-~~gaDivv~S~ 195 (382)
T TIGR02080 125 DEQALRAALAQ------KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPA--LQNPL-ALGADLVLHSC 195 (382)
T ss_pred CHHHHHHhcCc------CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccc--cCCch-hhCCCEEEeec
Confidence 57788887753 68999999999999999999966 58999999999999987664 22222 35789999999
Q ss_pred cccCCCCCCc--eEEEEEeC
Q 007454 305 YQIFGENPSG--FGCLFVKK 322 (603)
Q Consensus 305 hK~fG~~P~G--~G~L~vkk 322 (603)
+|++++ +.| .|++.+++
T Consensus 196 sK~l~G-~~~~~~G~i~~~~ 214 (382)
T TIGR02080 196 TKYLNG-HSDVIAGAVIAKD 214 (382)
T ss_pred ceeccC-CCCceeEEEEeCC
Confidence 999875 556 56555543
No 169
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.16 E-value=1.2e-09 Score=118.27 Aligned_cols=101 Identities=12% Similarity=0.106 Sum_probs=75.3
Q ss_pred HHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccC
Q 007454 205 TSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALG 283 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~ 283 (603)
.+++.|+++..++. .+.+++++.+.+ +|++|.+...+|.||.+.|++.| ++|+++|++|++|.++..
T Consensus 108 ~~~~~gi~v~~vd~------~d~e~l~~ai~~------~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~ 175 (380)
T PRK06176 108 VLVKNGLSCTIIDT------SDLSQIKKAIKP------NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFAT 175 (380)
T ss_pred HHHhcCeEEEEcCC------CCHHHHHHhcCc------CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccc
Confidence 34556666665543 257888887753 68999998889999999999855 589999999999999876
Q ss_pred CCCCCCCCCCCCCCcEEEEcccccCCCCCCc-eEE-EEEe
Q 007454 284 PKDMDSFGLSLVRPDFLICSFYQIFGENPSG-FGC-LFVK 321 (603)
Q Consensus 284 ~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G-~G~-L~vk 321 (603)
+....++ .+++|++++|++|++|+ |.. +|. ++.+
T Consensus 176 ~~~~~p~---~~gaDivv~S~tK~l~g-~~d~~gG~vv~~ 211 (380)
T PRK06176 176 PYYQNPL---LLGADIVVHSGTKYLGG-HSDVVAGLVTTN 211 (380)
T ss_pred cccCCcc---ccCCCEEEecCceeccC-CccceeeEEEec
Confidence 6521233 46899999999999986 443 444 4444
No 170
>PRK07324 transaminase; Validated
Probab=99.15 E-value=6.8e-09 Score=111.88 Aligned_cols=147 Identities=16% Similarity=0.196 Sum_probs=98.7
Q ss_pred HHHHHHHHHcC-CCCCcEEEeccC----------------------chHHHHHHHHHHcCCEEEEEeccCCc-cccCHHH
Q 007454 174 AMKKRIMDFLN-ISENDYVYDYES----------------------EAVEAMIRTSEKRGARVMSAEFSWPR-LRINSEK 229 (603)
Q Consensus 174 ~aR~~Ia~~ln-a~~~e~vf~~es----------------------~sV~~~~~~a~~~Ga~V~~~~~~~~~-g~i~~~~ 229 (603)
+.|+.|+++++ +++++++++..+ .+.......++..|++++.++.+..+ ..++.++
T Consensus 66 ~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~ 145 (373)
T PRK07324 66 EFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDE 145 (373)
T ss_pred HHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHH
Confidence 78999999885 678888765422 11222334566789999999886323 3578899
Q ss_pred HHHHHhhcCCCCCCeeEEEEeCcccccccccc---HH-HHHHHHhCCcEEEEeccccC-CCCCCCCCCC-CCCCcEEEEc
Q 007454 230 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YL-WMRIAQENDWHILIDACALG-PKDMDSFGLS-LVRPDFLICS 303 (603)
Q Consensus 230 L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p---l~-~i~~a~e~g~~vlvDAaq~~-~~~m~~ldls-~~~~Dflv~S 303 (603)
|++.+.. ++++++++..+|.||.++| ++ ++++|+++|+++++|.+... ..+-....+. ...-.+++.|
T Consensus 146 l~~~~~~------~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s 219 (373)
T PRK07324 146 LRRLVRP------NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNS 219 (373)
T ss_pred HHHhCCC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEec
Confidence 9887753 6889999999999999999 55 33578999999999986321 1100011111 1122366779
Q ss_pred ccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 304 FYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 304 ~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
+-|.||. .| +|.++..+++++.+
T Consensus 220 ~SK~~~~--~G~RiG~i~~~~~li~~~ 244 (373)
T PRK07324 220 MSKTYSL--PGIRVGWIAANEEVIDIL 244 (373)
T ss_pred chhhcCC--ccceeEEEecCHHHHHHH
Confidence 9999994 36 68888766554433
No 171
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.15 E-value=4e-09 Score=113.74 Aligned_cols=148 Identities=13% Similarity=0.092 Sum_probs=96.6
Q ss_pred HHHHHHHHHHc----C--CCCC-cEEEeccCc-hHHH---------------------HHHHHHHcCCEEEEEeccCC-c
Q 007454 173 SAMKKRIMDFL----N--ISEN-DYVYDYESE-AVEA---------------------MIRTSEKRGARVMSAEFSWP-R 222 (603)
Q Consensus 173 ~~aR~~Ia~~l----n--a~~~-e~vf~~es~-sV~~---------------------~~~~a~~~Ga~V~~~~~~~~-~ 222 (603)
.+.|+.|++++ | ++++ +++++..++ ++.. ....++..|+++..++.+.. .
T Consensus 72 ~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g 151 (385)
T PRK09276 72 LEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENG 151 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCC
Confidence 36777788877 4 4565 476654321 2211 22345567899998887633 2
Q ss_pred cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEeccccC----CCCCCCC-CCC
Q 007454 223 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG----PKDMDSF-GLS 293 (603)
Q Consensus 223 g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq~~----~~~m~~l-dls 293 (603)
..++.+++++.+.. +++++.+..-+|.||..+|.+ +++.|+++|+++++|-+... ++.+.++ .+.
T Consensus 152 ~~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 225 (385)
T PRK09276 152 FLPDLDAIPEDVAK------KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVP 225 (385)
T ss_pred CcCCHHHHHHhccc------cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccC
Confidence 45788888887753 578888888899999999974 34567999999999987532 2210111 111
Q ss_pred C-CCCcEEEEcccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 294 L-VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 294 ~-~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
. .+..+++.|+=|.|| ..| +|.++..+++++.+
T Consensus 226 ~~~~~~i~~~S~SK~~g--~~GlRiG~~i~~~~l~~~~ 261 (385)
T PRK09276 226 GAKDVGIEFHSLSKTYN--MTGWRIGFAVGNADLIAGL 261 (385)
T ss_pred CCcCCEEEEecchhhcC--CcchhheeeeCCHHHHHHH
Confidence 1 233577788999999 558 99998766654433
No 172
>PLN02624 ornithine-delta-aminotransferase
Probab=99.12 E-value=5.2e-08 Score=108.54 Aligned_cols=229 Identities=15% Similarity=0.136 Sum_probs=140.8
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCC--CCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKD--MDSFGLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~--m~~ldls~~~~ 297 (603)
+.+.|++.|... ..++..|.+-.+.|.+|.++| ++.+ ++|+++|+++++|-+|. .+.. +...+.....|
T Consensus 210 d~~~l~~~l~~~---~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~p 286 (474)
T PLN02624 210 DLDALEKIFEED---GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRP 286 (474)
T ss_pred CHHHHHHHHHhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCC
Confidence 568888888632 236888888888899999999 7755 48999999999999876 2221 12334445679
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 298 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
|++++| |-+|....-+|+++++++++..+.+...+.+ .|.++..
T Consensus 287 Div~ls--K~lggG~~pigav~~~~~i~~~~~~~~~~~T----------------------------------~~g~pl~ 330 (474)
T PLN02624 287 DVVILG--KALGGGVIPVSAVLADKDVMLCIKPGEHGST----------------------------------FGGNPLA 330 (474)
T ss_pred CEEEec--ccccCCCCcceeeeecHHHHhHhccCCcCCC----------------------------------CCCCHHH
Confidence 999987 9776411347888888776544432111100 0111222
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
.++++ ++|+.+.+. .+.++...+.++|.++|.++..
T Consensus 331 ~aaa~-----------------------------------------aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~ 366 (474)
T PLN02624 331 SAVAM-----------------------------------------AALQVVQDE---KLAERSAKLGQELRDQLQKIQK 366 (474)
T ss_pred HHHHH-----------------------------------------HHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHH
Confidence 22221 466665542 3455677777788887776531
Q ss_pred CCCCCCc-eEEEeCCCCCCCCCCEEEEEEccCC-CCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhh
Q 007454 458 PNTEGNA-LVKIYGPKIRFDRGPALAFNVFDWK-REKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTD 535 (603)
Q Consensus 458 ~~~~g~p-lv~Iygp~~~~~rg~ivsFnv~~~~-g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~ 535 (603)
. .| .+.-. ..+|.++.+.+.+.. +..... .+.+.+.++||.+..+
T Consensus 367 ~----~~~~i~~v-----rg~G~~~~i~l~~~~~~~~~a~-~~~~~L~e~GV~v~p~----------------------- 413 (474)
T PLN02624 367 Q----FPKLIKEV-----RGRGLLNAVVLNSPKLGPVSAY-DVCLKLKERGLLAKPT----------------------- 413 (474)
T ss_pred h----CCCceEEE-----EeeEEEEEEEecCCCcChHHHH-HHHHHHHhCCeEEecC-----------------------
Confidence 0 11 12100 124667776664321 011112 2333345578876421
Q ss_pred cccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhhhhc
Q 007454 536 REAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADFVE 587 (603)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~f~~ 587 (603)
...+||+++.+..|.+||+++++.|++++..+-..
T Consensus 414 -----------------~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~~~ 448 (474)
T PLN02624 414 -----------------HDTIIRLAPPLSISEDELQECSKALSDVLEHDLPK 448 (474)
T ss_pred -----------------CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 12589999999999999999999999999886554
No 173
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.11 E-value=5.2e-09 Score=113.42 Aligned_cols=118 Identities=14% Similarity=0.101 Sum_probs=78.7
Q ss_pred HHHHcCCEEEEEeccCC-ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH---H-HHHHHhCCcEEEEec
Q 007454 205 TSEKRGARVMSAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL---W-MRIAQENDWHILIDA 279 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~-~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~---~-i~~a~e~g~~vlvDA 279 (603)
.++..|+++..++++.. +..++.++|++.+.. +++++.+..-+|.||..+|.+ . +..|+++|++|++|.
T Consensus 137 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De 210 (394)
T PRK05942 137 GPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ------QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDL 210 (394)
T ss_pred HHHHcCCEEEEeecCCccCCccCHHHHHHhccc------cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEec
Confidence 34567899998887632 235899999888753 578888888899999999954 2 346899999999998
Q ss_pred ccc----CCCCCCC-CCCCC-CCCcEEEEcccccCCCCCCceEEEEEeCCCCcCc
Q 007454 280 CAL----GPKDMDS-FGLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 328 (603)
Q Consensus 280 aq~----~~~~m~~-ldls~-~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L 328 (603)
+-. -+....+ .++.. ....+++.||=|.||.+.-.+|.++..+++++.+
T Consensus 211 ~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l 265 (394)
T PRK05942 211 CYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGL 265 (394)
T ss_pred cchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHH
Confidence 721 1110001 11211 1234667888899984322289998877665444
No 174
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.11 E-value=7.4e-08 Score=106.87 Aligned_cols=119 Identities=17% Similarity=0.156 Sum_probs=84.3
Q ss_pred HHcCCEEEEEeccCC---------ccccCHHHHHHHHhhcCCCCCCeeEEEEeCcccccc-ccccHH---HH-HHHHhCC
Q 007454 207 EKRGARVMSAEFSWP---------RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTG-ARYPYL---WM-RIAQEND 272 (603)
Q Consensus 207 ~~~Ga~V~~~~~~~~---------~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG-~~~pl~---~i-~~a~e~g 272 (603)
+..|++++.++.+.. .+.+|.++|++.|..+. .++|+++++..-+|.|| ..++.+ .| ++|+++|
T Consensus 134 ~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~--~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~g 211 (460)
T PRK13238 134 ELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG--AENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYG 211 (460)
T ss_pred HHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcC--CCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 456899998887421 35699999999997421 13699999999999998 788764 34 4689999
Q ss_pred cEEEEeccccCCCC---------CCCCCCCC------CCCcEEEEcccccCCCCCCceEEEEEeC-CCCcCcC
Q 007454 273 WHILIDACALGPKD---------MDSFGLSL------VRPDFLICSFYQIFGENPSGFGCLFVKK-STVPILV 329 (603)
Q Consensus 273 ~~vlvDAaq~~~~~---------m~~ldls~------~~~Dflv~S~hK~fG~~P~G~G~L~vkk-~~~~~L~ 329 (603)
++|++|+++....- .....+.. ...|++++|+||++.. |.| |+|+.++ ++...++
T Consensus 212 i~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~-~~G-G~i~~~d~~l~~~~~ 282 (460)
T PRK13238 212 IPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMV-NIG-GLLCFRDEDLFTECR 282 (460)
T ss_pred CEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCC-cce-eEEEcChHHHHHHhh
Confidence 99999998865210 01222211 2489999999997654 777 8888884 4544444
No 175
>PRK07683 aminotransferase A; Validated
Probab=99.10 E-value=1.4e-08 Score=109.78 Aligned_cols=145 Identities=15% Similarity=0.219 Sum_probs=96.5
Q ss_pred HHHHHHHHHHc----C--CCCC-cEEEeccC-chHHH---------------------HHHHHHHcCCEEEEEeccCCcc
Q 007454 173 SAMKKRIMDFL----N--ISEN-DYVYDYES-EAVEA---------------------MIRTSEKRGARVMSAEFSWPRL 223 (603)
Q Consensus 173 ~~aR~~Ia~~l----n--a~~~-e~vf~~es-~sV~~---------------------~~~~a~~~Ga~V~~~~~~~~~g 223 (603)
.+.|+.|++++ | ++++ +++++..+ +++.. ....++..|+++..++.+..+.
T Consensus 68 ~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 147 (387)
T PRK07683 68 LELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGF 147 (387)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccC
Confidence 46788888877 3 4676 88776432 12221 1233456788888888763345
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEeccccCC-CCCCCCCCCCC---
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALGP-KDMDSFGLSLV--- 295 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq~~~-~~m~~ldls~~--- 295 (603)
.++.++|++.+.. ++++++++..+|.||..+|.+ +++.|+++|+++++|.+-..- .+=....+..+
T Consensus 148 ~~~~~~l~~~~~~------~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 221 (387)
T PRK07683 148 RLTAEALENAITE------KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEM 221 (387)
T ss_pred CCCHHHHHHhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCC
Confidence 5678889888753 578999999999999999964 335688999999999874321 00011122222
Q ss_pred -CCcEEEEcccccCCCCCCc--eEEEEEeCCCC
Q 007454 296 -RPDFLICSFYQIFGENPSG--FGCLFVKKSTV 325 (603)
Q Consensus 296 -~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~ 325 (603)
+-.+++.|+=|.||. | | +|++++.++++
T Consensus 222 ~~~vi~~~s~SK~~~~-p-GlRiG~i~~~~~l~ 252 (387)
T PRK07683 222 REKTIVINGLSKSHSM-T-GWRIGFLFAPSYLA 252 (387)
T ss_pred cCCeEEEeeccccccC-c-cceeEEEEcCHHHH
Confidence 235888999999995 3 6 88888765544
No 176
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.09 E-value=8.5e-09 Score=113.00 Aligned_cols=103 Identities=14% Similarity=0.117 Sum_probs=80.0
Q ss_pred HHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEecccc
Q 007454 204 RTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACAL 282 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~ 282 (603)
..+++.|+++..++.+ +.++|++.|.. ++++|.+...+|.||.+.|++.| ++|+++|+.+++|.++.
T Consensus 115 ~~~~~~G~~v~~v~~~------d~~~l~~~l~~------~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~ 182 (418)
T TIGR01326 115 HTLKRLGIEVRFVDPD------DPEEFEKAIDE------NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFA 182 (418)
T ss_pred HHHHHcCcEEEEECCC------CHHHHHHhcCc------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc
Confidence 3445667777776532 67888888853 58899999999999999999966 58999999999999987
Q ss_pred CCCCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCC
Q 007454 283 GPKDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKS 323 (603)
Q Consensus 283 ~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~ 323 (603)
.|....++ .+++|+++.|++|+|| +.| +|.+++++.
T Consensus 183 ~~~~~~~l---~~g~Divv~S~sK~l~--g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 183 TPYLCRPI---DHGADIVVHSATKYIG--GHGTAIGGVIVDGG 220 (418)
T ss_pred hhhcCCch---hcCCeEEEECcccccc--CCccceEEEEEecc
Confidence 66421222 3579999999999999 445 888888654
No 177
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.09 E-value=4.9e-08 Score=106.47 Aligned_cols=113 Identities=13% Similarity=0.163 Sum_probs=78.3
Q ss_pred HHHHHcCCEEEEEeccC----CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEE
Q 007454 204 RTSEKRGARVMSAEFSW----PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHI 275 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~----~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~v 275 (603)
..++..|+++..++++. .+..++.++|++.+.. +++++.+..-+|.||.++|.+. ++.|+++|+++
T Consensus 141 ~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~i 214 (405)
T PRK06207 141 KLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA------GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATV 214 (405)
T ss_pred HHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh------cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 44566788988888752 1346889999998863 4788888888999999999653 34678999999
Q ss_pred EEeccccC----CCCCCCCCCCCCCC--c--EEEEcccccCCCCCCc--eEEEEEeCCCCc
Q 007454 276 LIDACALG----PKDMDSFGLSLVRP--D--FLICSFYQIFGENPSG--FGCLFVKKSTVP 326 (603)
Q Consensus 276 lvDAaq~~----~~~m~~ldls~~~~--D--flv~S~hK~fG~~P~G--~G~L~vkk~~~~ 326 (603)
++|-+-.- +.. ...+..+.. | +++.||-|.||. .| +|.++..+.+++
T Consensus 215 I~De~Y~~~~~~~~~--~~~~~~~~~~~~~vi~i~SfSK~~~l--pGlRiG~ii~~~~l~~ 271 (405)
T PRK06207 215 IVDQLYSRLLYDGTS--YTHLRALPIDPENVITIMGPSKTESL--SGYRLGVAFGSPAIID 271 (405)
T ss_pred EEeccccccccCCCC--CCchhcCCCCcCcEEEEecchhhccC--cccceEEEEcCHHHHH
Confidence 99986321 210 111211111 2 788999999994 38 888877665543
No 178
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.08 E-value=2.8e-08 Score=110.80 Aligned_cols=148 Identities=10% Similarity=0.058 Sum_probs=95.3
Q ss_pred ceeeecCCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcC----
Q 007454 109 HTCLDYFGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLN---- 184 (603)
Q Consensus 109 ~vYLDyaa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~ln---- 184 (603)
.+-+|.++++++|..+++++.+++.... . ....|+.. .-..+.|+.|+++++
T Consensus 78 ~~i~~~~~~~~~P~~~~~~~~~~~~~~~-------------------~---~~~~Y~~~--~G~~~LR~aia~~~~~~~g 133 (481)
T PTZ00377 78 FLLEDPSVSSLFPADVVARAKEYLNAIG-------------------G---GTGAYTDS--AGYPFVRKAVAAFIERRDG 133 (481)
T ss_pred hhhcCccccccCCHHHHHHHHHHHHhCC-------------------C---cccCcCcc--cCCHHHHHHHHHHHHHhcC
Confidence 3456778999999999988764332110 0 00111110 113468888888875
Q ss_pred --CCCCcEEEeccCc-hH----------------------HHHHHHHHHcCCEEEEEeccCCc-cccCHHHHHHHHhhcC
Q 007454 185 --ISENDYVYDYESE-AV----------------------EAMIRTSEKRGARVMSAEFSWPR-LRINSEKLRKMVVSKG 238 (603)
Q Consensus 185 --a~~~e~vf~~es~-sV----------------------~~~~~~a~~~Ga~V~~~~~~~~~-g~i~~~~L~~~l~~~~ 238 (603)
+++++++++..+. ++ ......++..|++++.++++..+ ..++.++|++.+...+
T Consensus 134 ~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~ 213 (481)
T PTZ00377 134 VPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAV 213 (481)
T ss_pred CCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHH
Confidence 5788887654321 11 11233445678888888876322 3689999999986421
Q ss_pred CCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEecc
Q 007454 239 KKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDAC 280 (603)
Q Consensus 239 ~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDAa 280 (603)
+...+++++.+..-+|.||.++|.+. +..|++++++|+.|-+
T Consensus 214 ~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~ 259 (481)
T PTZ00377 214 RNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEV 259 (481)
T ss_pred hcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehh
Confidence 11225788777788999999999642 3468899999999975
No 179
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.08 E-value=3.5e-08 Score=106.77 Aligned_cols=180 Identities=11% Similarity=0.114 Sum_probs=108.2
Q ss_pred CceeeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHc---
Q 007454 108 NHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFL--- 183 (603)
Q Consensus 108 ~~vYLDyaa~t-l~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~l--- 183 (603)
+.++||.+... +.++.+.+++.+..... ..| .. . .-..+.|+.|++++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~-----~~Y------------~~--~---------~g~~~lr~~ia~~~~~~ 82 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEEV-----LAY------------SH--S---------QGIPELREAFAKYYKKW 82 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcCC-----cCc------------CC--C---------CCCHHHHHHHHHHHHHh
Confidence 46889998876 35667777765432100 000 00 0 11246888888887
Q ss_pred --CCCCCcEEEeccCc-hHHH---------------------HHHHHHHcCCEEEEEeccCCccc--cCHHHHHHHHhhc
Q 007454 184 --NISENDYVYDYESE-AVEA---------------------MIRTSEKRGARVMSAEFSWPRLR--INSEKLRKMVVSK 237 (603)
Q Consensus 184 --na~~~e~vf~~es~-sV~~---------------------~~~~a~~~Ga~V~~~~~~~~~g~--i~~~~L~~~l~~~ 237 (603)
++++++++++.... ++.. ....++..|+++..++.+..++. .+.++|++.+..
T Consensus 83 ~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~- 161 (397)
T PRK07568 83 GIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITP- 161 (397)
T ss_pred CCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCc-
Confidence 57788886653221 1111 12334566888888887522332 246888887753
Q ss_pred CCCCCCeeEEEEeCccccccccccHH---H-HHHHHhCCcEEEEecccc-C---CCCCCC-CCCCCCC-CcEEEEccccc
Q 007454 238 GKKKKQRGLFVFPLHSRMTGARYPYL---W-MRIAQENDWHILIDACAL-G---PKDMDS-FGLSLVR-PDFLICSFYQI 307 (603)
Q Consensus 238 ~~~~~~t~Lv~~~~~Sn~TG~~~pl~---~-i~~a~e~g~~vlvDAaq~-~---~~~m~~-ldls~~~-~Dflv~S~hK~ 307 (603)
++++|+++..+|.||.++|.+ . ++.|+++|+++++|.+-. . +....+ +++.... --+++-|+.|.
T Consensus 162 -----~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~ 236 (397)
T PRK07568 162 -----KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKR 236 (397)
T ss_pred -----cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhh
Confidence 688999999999999999854 2 346899999999998632 1 210011 2221111 12677899999
Q ss_pred CCCCCCceEEEEEe
Q 007454 308 FGENPSGFGCLFVK 321 (603)
Q Consensus 308 fG~~P~G~G~L~vk 321 (603)
||.+-..+|.++..
T Consensus 237 ~~~~G~R~G~~~~~ 250 (397)
T PRK07568 237 YSACGARIGCLISK 250 (397)
T ss_pred ccCCCcceEEEecC
Confidence 98422237777653
No 180
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.07 E-value=3.9e-09 Score=112.35 Aligned_cols=271 Identities=16% Similarity=0.165 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHcC------CCCC-cEEEeccCc-----------------------hHHHHHHHHHHcCCEEEEEeccC-
Q 007454 172 ESAMKKRIMDFLN------ISEN-DYVYDYESE-----------------------AVEAMIRTSEKRGARVMSAEFSW- 220 (603)
Q Consensus 172 ~~~aR~~Ia~~ln------a~~~-e~vf~~es~-----------------------sV~~~~~~a~~~Ga~V~~~~~~~- 220 (603)
....|+.|+++++ .+++ +++...... .-....+.++..|.++..+++++
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~ 125 (363)
T PF00155_consen 46 YPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSE 125 (363)
T ss_dssp HHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEET
T ss_pred hHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccccceecCCccccccccccccCceeeecccccc
Confidence 4589999999999 7777 776543211 11223445667788888888642
Q ss_pred CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HH---HHhCCcEEEEeccccCCCCCCC-------
Q 007454 221 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RI---AQENDWHILIDACALGPKDMDS------- 289 (603)
Q Consensus 221 ~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~---a~e~g~~vlvDAaq~~~~~m~~------- 289 (603)
.+..++.++|++.+.+.+.+..+++++.++..+|.||..+|.+.+ ++ |+++|.++++|-+...... ..
T Consensus 126 ~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~ 204 (363)
T PF00155_consen 126 NDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIF-GDPDFGPIR 204 (363)
T ss_dssp TTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBS-SSSHTHHHH
T ss_pred ccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceecccc-CCCccCccc
Confidence 356789999999998522211157899999999999999999744 34 7899999999987443220 11
Q ss_pred CCCCCCCC-cEEEEcccccCCCCCCc--eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccc
Q 007454 290 FGLSLVRP-DFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSK 366 (603)
Q Consensus 290 ldls~~~~-Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 366 (603)
..+. ... -+++.|+-|.||. .| +|.+++.+...+.+....
T Consensus 205 ~~~~-~~~~vi~~~S~SK~~g~--~GlRvG~i~~~~~~~~~l~~~~---------------------------------- 247 (363)
T PF00155_consen 205 SLLD-EDDNVIVVGSLSKSFGL--PGLRVGYIVAPPELIERLRRFQ---------------------------------- 247 (363)
T ss_dssp GHHT-TTSTEEEEEESTTTTTS--GGGTEEEEEEEHHHHHHHHHHH----------------------------------
T ss_pred cccc-ccccceeeeeccccccc--cccccccccchhhhhhhhhhcc----------------------------------
Confidence 1122 233 4999999999994 37 899999775543333100
Q ss_pred cccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhc--CHHHHHHHHHHH
Q 007454 367 QEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL--GLTMISRRGRCL 444 (603)
Q Consensus 367 ~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i--Gl~~i~~r~~~L 444 (603)
..+..+......+. ..+...... -+.++.++.+..
T Consensus 248 ---~~~~~~~~~~~~~~----------------------------------------~~l~~~~~~~~~~~~~~~~l~~~ 284 (363)
T PF00155_consen 248 ---RSGLSSSPMQAAAA----------------------------------------AALSDPELVEKWLEELRERLREN 284 (363)
T ss_dssp ---HHTTSSHHHHHHHH----------------------------------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---ccccccchhhHHHH----------------------------------------HhhhcccccccccccchhhHHHH
Confidence 01111111111111 112111110 245667777888
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhh
Q 007454 445 INWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQ 524 (603)
Q Consensus 445 ~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~ 524 (603)
.++|.+.|.++ | +.++++. ++++.+...+.. -..++.++|+++.||.+..|...
T Consensus 285 ~~~l~~~L~~~------~---~~~~~~~-----~~~~~~~~~~~~---~~~~l~~~L~~~~gi~v~pg~~~--------- 338 (363)
T PF00155_consen 285 RDLLREALEEI------G---ITVLPPE-----AGFFLWVRLDPN---DAEELAQELLEEYGILVRPGSYF--------- 338 (363)
T ss_dssp HHHHHHHHHHT------T---SEEEHHS-----BSSEEEEEESHH---HHHHHHHHHHHHHTEEEEEGGGG---------
T ss_pred HHHHHHHHHHh------h---hheeecc-----CccEEEEEcccc---hHHHHHHHHHHhCCEEEEecCCC---------
Confidence 88889999775 2 4555542 455555544421 12356777887779999877332
Q ss_pred hhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHH
Q 007454 525 KEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFV 577 (603)
Q Consensus 525 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l 577 (603)
.. .+.||+|+ -..+.|+++++++.|
T Consensus 339 --------------------------~~-~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 339 --------------------------GV-PGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp --------------------------TS-TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred --------------------------CC-CCEEEEEe-ccCCHHHHHHHHhhC
Confidence 11 36899999 889999999998865
No 181
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.06 E-value=1.5e-07 Score=103.37 Aligned_cols=225 Identities=13% Similarity=0.074 Sum_probs=136.0
Q ss_pred HHHHHHHHhhcCCCCCCee-EEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCC--CCCCCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRG-LFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKD--MDSFGLSLVRP 297 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~-Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~--m~~ldls~~~~ 297 (603)
.++|++.|... .++.. +++-|......|.+.| ++.+ ++|+++|+++++|-+|. .+.. +...+.....|
T Consensus 186 ~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~p 262 (423)
T PRK05964 186 LDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSP 262 (423)
T ss_pred HHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCC
Confidence 66777777531 12454 4444546777898875 4444 47899999999999874 2221 11112234579
Q ss_pred cEEEEcccccCCCCC-CceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCC--C
Q 007454 298 DFLICSFYQIFGENP-SGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAAT--N 374 (603)
Q Consensus 298 Dflv~S~hK~fG~~P-~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT--~ 374 (603)
|++++| |.+|+ . -.+|+++.++++++.+.+...++.. +-.+| .
T Consensus 263 Di~~~~--K~l~g-G~~p~~av~~~~~i~~~~~~~~~~~~~-------------------------------~~~~T~~~ 308 (423)
T PRK05964 263 DIMCLS--KGLTG-GYLPLAATLCTAEIFEAFYSDDRAKAF-------------------------------MHSPSYTA 308 (423)
T ss_pred Ceeeee--hhhhc-CcccceEEEEcHHHHHhhhcCCccccc-------------------------------ccCCCCCc
Confidence 999887 98763 3 2488888888877655321000100 01222 2
Q ss_pred ChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Q 007454 375 TFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMK 454 (603)
Q Consensus 375 n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~ 454 (603)
|..+.++.. ++++.+.+ +.+.++++.+.++|.+.|.+
T Consensus 309 np~~~aaa~----------------------------------------a~l~~l~~---~~~~~~~~~~g~~l~~~l~~ 345 (423)
T PRK05964 309 NPLACAAAN----------------------------------------ASLDLFED---EPVLERVAALSAGLAEGLEP 345 (423)
T ss_pred CHHHHHHHH----------------------------------------HHHHHHHh---cCHHHHHHHHHHHHHHHHHh
Confidence 333322211 46776654 34567888889999999887
Q ss_pred CCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhh
Q 007454 455 LQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKT 534 (603)
Q Consensus 455 L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~ 534 (603)
+. +.|.|. . . ...|.++.|.+.+.+.... ...+.+.+.++||.++..
T Consensus 346 l~-----~~~~i~---~-v-rg~Gl~~~i~l~~~~~~~~-~~~l~~~l~~~Gv~v~~~---------------------- 392 (423)
T PRK05964 346 FR-----DLPGVA---D-V-RVLGAIGAVELDRPVLERD-GPALRAFALERGVLLRPL---------------------- 392 (423)
T ss_pred hc-----cCCCeE---E-e-ecccEEEEEEeccCcchhH-HHHHHHHHHHCCeEEEec----------------------
Confidence 73 123331 1 0 1357788888865321111 223334344577776410
Q ss_pred hcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 535 DREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
..++|+++++++|.+|||++++.+++.+++
T Consensus 393 -------------------~~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 393 -------------------GNTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred -------------------CCEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 148999999999999999999999998854
No 182
>PLN02242 methionine gamma-lyase
Probab=99.05 E-value=2e-08 Score=110.15 Aligned_cols=93 Identities=18% Similarity=0.198 Sum_probs=71.0
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcc
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSF 304 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~ 304 (603)
+.++|+++|.. .+|+++.+...+|.||.+.|++.| ++|+++|++|++|.++. +- .++...++.|+++.|+
T Consensus 151 d~e~l~~~i~~-----~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~-~~---~~~~~~~g~divv~S~ 221 (418)
T PLN02242 151 DLEAVKKAVVP-----GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFA-PM---VLSPARLGADVVVHSI 221 (418)
T ss_pred CHHHHHHhcCc-----CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCC-cc---CCCHHHcCCcEEEEeC
Confidence 67888888753 148999999999999999999855 58999999999999874 32 2444456899999999
Q ss_pred cccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 305 YQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 305 hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
.|+||+ +.. .|+++.+++.+..+
T Consensus 222 SK~l~g-~g~~~gG~iv~~~~li~~l 246 (418)
T PLN02242 222 SKFISG-GADIIAGAVCGPAELVNSM 246 (418)
T ss_pred ccccCC-CCCceEEEEEcCHHHHHHH
Confidence 999984 322 47777666554433
No 183
>PRK07777 aminotransferase; Validated
Probab=99.03 E-value=4.7e-08 Score=105.63 Aligned_cols=114 Identities=15% Similarity=0.148 Sum_probs=78.9
Q ss_pred HHHHcCCEEEEEeccCC--ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEe
Q 007454 205 TSEKRGARVMSAEFSWP--RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILID 278 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~--~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvD 278 (603)
.++..|+++..++.+.. +..++.++|++.+.. ++++|.++..+|.||..+|.+ ++++|+++++++++|
T Consensus 125 ~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~D 198 (387)
T PRK07777 125 VIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTP------RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITD 198 (387)
T ss_pred HHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCc------ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEe
Confidence 34556888887777521 245889999988753 578888888899999999854 235689999999999
Q ss_pred ccccC----CCCCCCCC-CC-CCCCcEEEEcccccCCCCCCc--eEEEEEeCCCCc
Q 007454 279 ACALG----PKDMDSFG-LS-LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVP 326 (603)
Q Consensus 279 Aaq~~----~~~m~~ld-ls-~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~ 326 (603)
-+... +....++. +. ..+.++++.|+.|.||. .| +|+++.++.+++
T Consensus 199 e~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~--~GlRiG~~~~~~~l~~ 252 (387)
T PRK07777 199 EVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNV--TGWKIGWACGPAPLIA 252 (387)
T ss_pred ccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccC--cCceeEEEecCHHHHH
Confidence 86431 21001221 11 13468999999999994 37 688887665543
No 184
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.02 E-value=2.5e-07 Score=100.59 Aligned_cols=221 Identities=12% Similarity=0.115 Sum_probs=138.0
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC----CCCCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG----PKDMDSFGLSLVR 296 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~----~~~m~~ldls~~~ 296 (603)
+.++|++.|... .+++..|.+-.+.+.+|.+.| ++.+ ++|+++|+++++|-++.+ |+ +..++...+.
T Consensus 172 d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~-~~~~~~~~~~ 247 (401)
T TIGR01885 172 NLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGK-LLCVDHENVK 247 (401)
T ss_pred CHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch-hhHHhhcCCC
Confidence 578888888632 135677777777788999998 7755 589999999999997542 22 1123333467
Q ss_pred CcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCCh
Q 007454 297 PDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTF 376 (603)
Q Consensus 297 ~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~ 376 (603)
||++++| |-+|+.-.-+|+++.++++++.+.+...+.+ + .| +.
T Consensus 248 ~di~~~g--K~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t--------------------------------~-~~--~p 290 (401)
T TIGR01885 248 PDIVLLG--KALSGGVYPVSAVLADDDVMLTIKPGEHGST--------------------------------Y-GG--NP 290 (401)
T ss_pred CCEEEee--ccccCCCCCcEEEEEcHHHHhhccCCCCCCC--------------------------------C-CC--CH
Confidence 9999877 9776300126888888776654542110000 0 11 11
Q ss_pred hhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCC
Q 007454 377 SGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQ 456 (603)
Q Consensus 377 ~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~ 456 (603)
....+. .++|+.+..- .+.++.+.+.+++.++|.++.
T Consensus 291 ~~~~aa----------------------------------------~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l~ 327 (401)
T TIGR01885 291 LACAVA----------------------------------------VAALEVLEEE---KLAENAEKLGEIFRDQLKKLP 327 (401)
T ss_pred HHHHHH----------------------------------------HHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcc
Confidence 111111 1577766542 455788889999999999874
Q ss_pred CCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhc
Q 007454 457 HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDR 536 (603)
Q Consensus 457 h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~ 536 (603)
+ +++.-+ ..+|.+..+-+.+........++..+| .++||.+..+
T Consensus 328 ~------~~~~~~-----~g~g~~~~i~~~~~~~~~~~~~l~~~l-~~~Gv~v~~~------------------------ 371 (401)
T TIGR01885 328 K------PIITEV-----RGRGLLNAIVIDESKTGRTAWDLCLKL-KEKGLLAKPT------------------------ 371 (401)
T ss_pred C------CceeEE-----eecCeeEEEEeccCcchhHHHHHHHHH-HhCCEEEEec------------------------
Confidence 3 222111 125778887775432111122334444 4668876411
Q ss_pred ccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 007454 537 EAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~ 582 (603)
....+|+++.+..|.+||+++++.|++++|
T Consensus 372 ----------------~~~~lRi~p~l~~t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 372 ----------------HGNIIRLAPPLVITEEQLDEGLEIIKKVID 401 (401)
T ss_pred ----------------CCCEEEEeCCccCCHHHHHHHHHHHHHHhC
Confidence 124899999999999999999999999875
No 185
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.02 E-value=1.3e-07 Score=102.35 Aligned_cols=135 Identities=13% Similarity=0.147 Sum_probs=91.7
Q ss_pred HHHHcCCCCC-cEEEe-ccCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccc
Q 007454 179 IMDFLNISEN-DYVYD-YESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT 256 (603)
Q Consensus 179 Ia~~lna~~~-e~vf~-~es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~T 256 (603)
++..+++.|. +++.. .+..+ ....+...|++++.+++++.+..++.++|++++.. +|++|.. +|.+
T Consensus 62 ~l~al~~~pGd~Viv~~~t~~~---~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~------~tk~Iip---~~~~ 129 (376)
T TIGR02379 62 AALLLDIQPGDEVIMPSYTFVS---TANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH------RTKAIVP---VHYA 129 (376)
T ss_pred HHHHcCCCCcCEEEECCCCcHH---HHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc------CceEEEE---eCCC
Confidence 3445677774 44432 22222 23344567999999999865578999999998863 5788753 4579
Q ss_pred cccccHHH-HHHHHhCCcEEEEeccccCCCCCCCCCCCCCCC--cEEEEccccc--CC-CCCCceEEEEEe-CCCCcCcC
Q 007454 257 GARYPYLW-MRIAQENDWHILIDACALGPKDMDSFGLSLVRP--DFLICSFYQI--FG-ENPSGFGCLFVK-KSTVPILV 329 (603)
Q Consensus 257 G~~~pl~~-i~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~--Dflv~S~hK~--fG-~~P~G~G~L~vk-k~~~~~L~ 329 (603)
|...|++. +++|+++|++|+.|++|..+. ..+-...+. |+.+||||+. +. + +. .|+++.+ ++..+.++
T Consensus 130 G~~~d~~~I~~la~~~~i~vIeDaa~~~g~---~~~~~~~g~~~~~~~fSf~~~K~l~~g-~~-gG~v~~~~~~~~~~~~ 204 (376)
T TIGR02379 130 GVACDMDTIMALANKHQLFVIEDAAQGVMS---TYKGRALGSIGHLGTFSFHETKNYTSG-GE-GGALLINDQAFIERAE 204 (376)
T ss_pred CCccCHHHHHHHHHHCCCEEEEECccccCC---ccCCcccCCCCCEEEEeCCCCCcCccc-CC-ceEEEECCHHHHHHHH
Confidence 99999984 468999999999999998775 233333333 9999999973 32 1 33 4666665 44555555
Q ss_pred C
Q 007454 330 D 330 (603)
Q Consensus 330 p 330 (603)
+
T Consensus 205 ~ 205 (376)
T TIGR02379 205 I 205 (376)
T ss_pred H
Confidence 3
No 186
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.02 E-value=4.9e-08 Score=102.24 Aligned_cols=215 Identities=15% Similarity=0.186 Sum_probs=146.2
Q ss_pred eeEEEEeCccccccccccHH-HHHHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeC
Q 007454 244 RGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKK 322 (603)
Q Consensus 244 t~Lv~~~~~Sn~TG~~~pl~-~i~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk 322 (603)
...|.+.+-.-.+|+.+|-. ++. .+..+++|+++.+.. .++|+++ .|.+.++..|.+| |.|++++++|+
T Consensus 145 ~ayv~~~~NeTi~Gv~v~~~p~~~----~~~~~v~D~SS~ils--r~iDvsk--~dviyagaQKnlG--paGltvvIvr~ 214 (365)
T COG1932 145 DAYVHFCWNETISGVEVPELPDIG----SDGLLVADASSAILS--RPIDVSK--YDVIYAGAQKNLG--PAGLTVVIVRP 214 (365)
T ss_pred ccEEEEecCCcccceEccCCCCCC----CCceEEEecccHHhc--CCCChhH--cceEEEehhhccC--ccceEEEEEcH
Confidence 56688888888889888731 221 127899999877766 5899986 6999999999999 99999999999
Q ss_pred CCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhh
Q 007454 323 STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAE 402 (603)
Q Consensus 323 ~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~ 402 (603)
++++.+++.....+. . + .. .. +...|-|.+.++++.. +.
T Consensus 215 ~~l~r~~~~~~P~if-------~-y--~~-------------~~--~~~s~yNTPptfa~y~-------------~~--- 253 (365)
T COG1932 215 DLLERAESYTLPSIF-------D-Y--LT-------------HA--DNGSMYNTPPTFAWYL-------------LG--- 253 (365)
T ss_pred HHHhcccccCCchHh-------h-c--hh-------------hh--ccCCccCCcHHHHHHH-------------HH---
Confidence 998777643111110 0 0 00 00 3466777777766541 11
Q ss_pred hhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCC-CC-CCCCC
Q 007454 403 ADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPK-IR-FDRGP 479 (603)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~-~~-~~rg~ 479 (603)
..++++.+. |++.+.+|.+.=.+.|++-+.+-. .|.+. .+ .+.-=
T Consensus 254 ---------------------lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~-----------fy~~~v~~~~RS~m 301 (365)
T COG1932 254 ---------------------LVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSD-----------FYRNLVAKANRSRM 301 (365)
T ss_pred ---------------------HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC-----------ccccccchhhccce
Confidence 578888877 699999999999999999987631 12211 11 23345
Q ss_pred EEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEE
Q 007454 480 ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTA 559 (603)
Q Consensus 480 ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~ 559 (603)
.|.|.+.+.+ ++...|+++ +++|...=.| ....|.+|+
T Consensus 302 nV~f~~~~~~---ld~~fv~ea-e~~gl~~lkG--------------------------------------hr~vgGmRa 339 (365)
T COG1932 302 NVTFTLVDAE---LDKGFVAEA-EAAGLIYLKG--------------------------------------HRSVGGLRA 339 (365)
T ss_pred eEEEEcCcHH---HHHHHHHHH-HHcCCceecc--------------------------------------ccCCCceee
Confidence 7888887532 455555444 4444432222 122356999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 560 SLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 560 Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
|+.---..|||++|++|+++|...
T Consensus 340 siynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 340 SIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred eeecCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998654
No 187
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.02 E-value=5.5e-08 Score=104.97 Aligned_cols=124 Identities=14% Similarity=0.187 Sum_probs=86.2
Q ss_pred HHcCCCCC-cEEEe-ccCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccc
Q 007454 181 DFLNISEN-DYVYD-YESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGA 258 (603)
Q Consensus 181 ~~lna~~~-e~vf~-~es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~ 258 (603)
..+++.+. +++.+ +...+ ....++..|++++.++++..+..++.++|++++.. +++++.+. |.+|.
T Consensus 64 ~~~~~~~Gd~Viv~~~t~~~---~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~------~tk~i~~~---~~~G~ 131 (375)
T PRK11706 64 LLLDIQPGDEVIMPSYTFVS---TANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP------KTRAIVPV---HYAGV 131 (375)
T ss_pred HHhCCCCCCEEEECCCCcHH---HHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC------CCeEEEEe---CCCCC
Confidence 34566664 45443 22222 34455678999999999854557899999998863 57777654 46999
Q ss_pred cccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCC--CCcEEEEccc--ccCCCCCCce-EEEEEeC
Q 007454 259 RYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLV--RPDFLICSFY--QIFGENPSGF-GCLFVKK 322 (603)
Q Consensus 259 ~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~--~~Dflv~S~h--K~fG~~P~G~-G~L~vkk 322 (603)
..+++.+ ++|+++|+.|+.|++|..+. ..+-... -.|+-++||| |.++ + |. |++++++
T Consensus 132 ~~~~~~i~~la~~~~i~vIeD~a~a~g~---~~~~~~~g~~~~~~~~Sf~~~K~l~--~-g~gG~~~~~~ 195 (375)
T PRK11706 132 ACEMDTIMALAKKHNLFVVEDAAQGVMS---TYKGRALGTIGHIGCFSFHETKNYT--A-GEGGALLIND 195 (375)
T ss_pred ccCHHHHHHHHHHcCCEEEEECcccccc---ccCCeeeecCcCEEEEeCCCCcccc--c-cCCeEEEECC
Confidence 9999855 68999999999999987774 2221111 2599999999 9998 5 44 4455543
No 188
>PRK09265 aminotransferase AlaT; Validated
Probab=99.01 E-value=7e-08 Score=105.00 Aligned_cols=138 Identities=14% Similarity=0.190 Sum_probs=90.7
Q ss_pred HHHHHHHHHc------CCCCCcEEEeccCc-hHHH---------------------HHHHHHHcCCEEEEEeccCC-ccc
Q 007454 174 AMKKRIMDFL------NISENDYVYDYESE-AVEA---------------------MIRTSEKRGARVMSAEFSWP-RLR 224 (603)
Q Consensus 174 ~aR~~Ia~~l------na~~~e~vf~~es~-sV~~---------------------~~~~a~~~Ga~V~~~~~~~~-~g~ 224 (603)
..|+.|++++ ++++++++++..+. ++.. ....++..|.++..++.+.. +..
T Consensus 76 ~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~ 155 (404)
T PRK09265 76 SARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWF 155 (404)
T ss_pred HHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCC
Confidence 6888899887 78889998765432 1211 12334456777777665422 346
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc---HHHH-HHHHhCCcEEEEecccc----CCCCCCCCCCCCCC
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP---YLWM-RIAQENDWHILIDACAL----GPKDMDSFGLSLVR 296 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p---l~~i-~~a~e~g~~vlvDAaq~----~~~~m~~ldls~~~ 296 (603)
++.++|++.+.. +++++.+...+|.||.++| ++.+ +.|+++|+++++|-+-. .+.. ...+..+.
T Consensus 156 ~d~~~l~~~~~~------~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~ 227 (404)
T PRK09265 156 PDLDDIRSKITP------RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAV--HISIASLA 227 (404)
T ss_pred CCHHHHHHhccc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCC--cCCHHHcC
Confidence 888999888753 5889898899999999999 5533 57899999999997621 1210 11111111
Q ss_pred Cc--E-EEEcccccCCCCCCc--eEEEEEe
Q 007454 297 PD--F-LICSFYQIFGENPSG--FGCLFVK 321 (603)
Q Consensus 297 ~D--f-lv~S~hK~fG~~P~G--~G~L~vk 321 (603)
.+ . ++-|+-|.||. .| +|.++..
T Consensus 228 ~~~~vi~~~S~SK~~~~--pGlRiG~~v~~ 255 (404)
T PRK09265 228 PDLLCVTFNGLSKAYRV--AGFRVGWMVLS 255 (404)
T ss_pred CCceEEEEecchhhccC--cccceEEEEEe
Confidence 22 3 45677899984 26 6888863
No 189
>PRK10534 L-threonine aldolase; Provisional
Probab=99.00 E-value=2.6e-08 Score=105.15 Aligned_cols=108 Identities=10% Similarity=0.166 Sum_probs=68.8
Q ss_pred CEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEeccccCCC-
Q 007454 211 ARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACALGPK- 285 (603)
Q Consensus 211 a~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq~~~~- 285 (603)
+++..++++ .++.++.++|++++.+++....+++++.+. ++.||.++|.+.+ ++|+++|++|++|.+.....
T Consensus 98 ~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~--np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~ 174 (333)
T PRK10534 98 IQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLE--NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAV 174 (333)
T ss_pred ceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEe--cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHH
Confidence 566666655 356788999999885311111147888877 5668999999755 35788999999998633211
Q ss_pred ---CCCCC-CCCCCCCcEEEEcccccCCCCCCceE-EEEEeCCCCc
Q 007454 286 ---DMDSF-GLSLVRPDFLICSFYQIFGENPSGFG-CLFVKKSTVP 326 (603)
Q Consensus 286 ---~m~~l-dls~~~~Dflv~S~hK~fG~~P~G~G-~L~vkk~~~~ 326 (603)
. .++ ++. ..+|.+++||.|.||. | +| +++..+++++
T Consensus 175 ~~~~-~~~~~~~-~~~~~~~~s~SK~~~~-~--~G~~~~~~~~~i~ 215 (333)
T PRK10534 175 VAYG-CELKEIT-QYCDSFTICLSKGLGT-P--VGSLLVGNRDYIK 215 (333)
T ss_pred HHcC-CCHHHHH-hcCCEEEEEeEcCCCC-c--ccceEEcCHHHHH
Confidence 0 011 111 1357777899999995 4 67 4555555543
No 190
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.99 E-value=2.9e-08 Score=107.27 Aligned_cols=181 Identities=15% Similarity=0.133 Sum_probs=104.0
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccch-HHHHHHHHHHHHHHHcCCCCCcEEEe
Q 007454 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQ-ESGLESAMKKRIMDFLNISENDYVYD 193 (603)
Q Consensus 115 aa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~-~~~~~~~aR~~Ia~~lna~~~e~vf~ 193 (603)
++-...|+.|+++....+.+ -|.-+.|.....-|.. ..+++.-+.+++.++||++|+++.-+
T Consensus 27 aSEN~~Sp~v~~al~S~l~n-----------------kyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~an 89 (399)
T PF00464_consen 27 ASENYMSPAVREALGSDLTN-----------------KYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYAN 89 (399)
T ss_dssp TT-----HHHHHHHTSGGGG-----------------S-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE
T ss_pred CcccccCHHHHHHhCCccee-----------------eccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEE
Confidence 56667899999987654432 1222445444333333 46788889999999999998877332
Q ss_pred c--cC--chHHHHHHHHHH-------------------------------cCCEEEEEeccCCccccCHHHHHHHHhhcC
Q 007454 194 Y--ES--EAVEAMIRTSEK-------------------------------RGARVMSAEFSWPRLRINSEKLRKMVVSKG 238 (603)
Q Consensus 194 ~--es--~sV~~~~~~a~~-------------------------------~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~ 238 (603)
- .| ++-..+...+-+ +.+++...+++..++.||.+++++++...
T Consensus 90 vqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~- 168 (399)
T PF00464_consen 90 VQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEH- 168 (399)
T ss_dssp ---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH-
T ss_pred eecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhc-
Confidence 1 11 111111111112 23456666677668899999999998753
Q ss_pred CCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCC-----CCCCCCCCCCCCcEEEEcccccCCCCC
Q 007454 239 KKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPK-----DMDSFGLSLVRPDFLICSFYQIFGENP 312 (603)
Q Consensus 239 ~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~-----~m~~ldls~~~~Dflv~S~hK~fG~~P 312 (603)
+++|+.+...+. =..+|++.++ +|.+.|+++++|+++.+|- --.||+ .+|++++|-||-|.+ |
T Consensus 169 ----kPklIi~G~S~y--~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~----~ADvvt~sThKtl~G-P 237 (399)
T PF00464_consen 169 ----KPKLIICGASSY--PRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP----YADVVTGSTHKTLRG-P 237 (399)
T ss_dssp ------SEEEEE-SST--SS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC----TSSEEEEESSGGG-S-S
T ss_pred ----CCCEEEECchhc--cCccCHHHHHHHHHhcCcEEEecccccccceehheecCccc----cceEEEeeccccccc-c
Confidence 578998887652 3457777775 7899999999999875531 013553 389999999997665 8
Q ss_pred CceEEEEEeCCCC
Q 007454 313 SGFGCLFVKKSTV 325 (603)
Q Consensus 313 ~G~G~L~vkk~~~ 325 (603)
.| |+++.+++..
T Consensus 238 rg-giI~~~~~~~ 249 (399)
T PF00464_consen 238 RG-GIILTNKGSK 249 (399)
T ss_dssp S--EEEEES-SEE
T ss_pred Cc-eEEEEcCCcc
Confidence 86 8888886553
No 191
>PRK06836 aspartate aminotransferase; Provisional
Probab=98.99 E-value=1.1e-07 Score=103.24 Aligned_cols=146 Identities=11% Similarity=0.155 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHcC------CCCCcEEEeccC-chHH---------------------HHHHHHHHcCCEEEEEeccCCcc
Q 007454 172 ESAMKKRIMDFLN------ISENDYVYDYES-EAVE---------------------AMIRTSEKRGARVMSAEFSWPRL 223 (603)
Q Consensus 172 ~~~aR~~Ia~~ln------a~~~e~vf~~es-~sV~---------------------~~~~~a~~~Ga~V~~~~~~~~~g 223 (603)
+...|+.|+++++ +++++++++..+ +++. .....++..|++++.++.+..++
T Consensus 75 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~ 154 (394)
T PRK06836 75 YPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTF 154 (394)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccC
Confidence 3468888888875 578888775432 1111 12334567899999999874336
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHh------CCcEEEEecccc----CCCCCCC
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQE------NDWHILIDACAL----GPKDMDS 289 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e------~g~~vlvDAaq~----~~~~m~~ 289 (603)
.++.++|++++.. +++++.+++.+|.||..+|.+.+ ++|++ +|+++++|.+-. .+.. .+
T Consensus 155 ~~d~~~l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~-~~ 227 (394)
T PRK06836 155 QPDLDALEAAITP------KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAE-VP 227 (394)
T ss_pred cCCHHHHHhhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCC-CC
Confidence 7899999998853 58899999999999999998643 35677 899999998632 1211 11
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 007454 290 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKST 324 (603)
Q Consensus 290 ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~ 324 (603)
.-++...-.+++.|+-|.||.|--.+|++++.+..
T Consensus 228 ~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~ 262 (394)
T PRK06836 228 YIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEM 262 (394)
T ss_pred ChHHccCcEEEEecchhhccCcceeeEEEecCHHH
Confidence 11223344688899999998532238888876554
No 192
>PRK12414 putative aminotransferase; Provisional
Probab=98.98 E-value=1.1e-07 Score=102.80 Aligned_cols=151 Identities=11% Similarity=0.171 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHcCCC--C-CcEEEeccCc-hH---------------------HHHHHHHHHcCCEEEEEeccCCccc
Q 007454 170 GLESAMKKRIMDFLNIS--E-NDYVYDYESE-AV---------------------EAMIRTSEKRGARVMSAEFSWPRLR 224 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~--~-~e~vf~~es~-sV---------------------~~~~~~a~~~Ga~V~~~~~~~~~g~ 224 (603)
++.+.+++.+++++|++ + ++++.+.... ++ ......++..|.++..+++++.+..
T Consensus 70 ~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 149 (384)
T PRK12414 70 ALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFR 149 (384)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccc
Confidence 45566777777777874 3 4676543221 11 1122334567899999988755667
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEecccc----CCCCCCCC-CCCC-
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL----GPKDMDSF-GLSL- 294 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq~----~~~~m~~l-dls~- 294 (603)
++.++|++.+.. +++++.++.-+|.||.+++-+ ++++|+++|+++++|.+-. -+....++ .+..
T Consensus 150 ~d~~~l~~~l~~------~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~ 223 (384)
T PRK12414 150 VNWDEVAAAITP------RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHREL 223 (384)
T ss_pred cCHHHHHhhcCc------ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCc
Confidence 899999988853 588999999999999998754 2346789999999998732 12110111 1111
Q ss_pred CCCcEEEEcccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 295 VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 295 ~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
.+--+++.||-|.||. .| +|.+++.+++++.+
T Consensus 224 ~~~~i~~~SfSK~~~~--pGlRiG~~v~~~~l~~~l 257 (384)
T PRK12414 224 AERSVIVSSFGKSYHV--TGWRVGYCLAPAELMDEI 257 (384)
T ss_pred cCcEEEEecccccccC--ccceEEEEecCHHHHHHH
Confidence 1123899999999984 37 68888776654433
No 193
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=98.97 E-value=1.6e-07 Score=99.86 Aligned_cols=182 Identities=11% Similarity=0.106 Sum_probs=116.7
Q ss_pred CceeeecCCCC-CCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHHHHcCCC
Q 007454 108 NHTCLDYFGIG-LFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIMDFLNIS 186 (603)
Q Consensus 108 ~~vYLDyaa~t-l~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia~~lna~ 186 (603)
+.++||++..+ +.++.+++++.+.+... +. . .|.. .-..+.|++|++++|++
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~-~--~Y~~---~g~~~lr~~ia~~~~~~ 71 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRV---------------------PF-N--RYPH---ITSDPLREAIAEFYGLD 71 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcC---------------------cc-c--cCCC---CCHHHHHHHHHHHhCcC
Confidence 46999999877 46677888766532110 00 0 0100 01247999999999999
Q ss_pred CCcEEEeccCc-hHHH-------------------HHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeE
Q 007454 187 ENDYVYDYESE-AVEA-------------------MIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGL 246 (603)
Q Consensus 187 ~~e~vf~~es~-sV~~-------------------~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~L 246 (603)
+++++++..+. ++.. ....++..|.++..++.+ .+..++.++|++.+. ++++
T Consensus 72 ~~~I~~t~G~~~~l~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~~~-------~~~~ 143 (337)
T PRK03967 72 AENIAVGNGSDELISYLVKLFEGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK-EDFTIDGERIAEKAK-------NASA 143 (337)
T ss_pred cceEEEcCCHHHHHHHHHHHhCCCeEEEeCCChHHHHHHHHHcCCeEEEeecC-CCCCcCHHHHHHhcc-------CCCE
Confidence 99998764322 1111 122345678899888886 345788888887542 4678
Q ss_pred EEEeCccccccccccHHHHH-HHHhCCcEEEEeccc--cCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 007454 247 FVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACA--LGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 247 v~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq--~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
+.++.-+|.||..+|.+.+. ++ +++.++++|.+- +.+..+.++ ++...-=+++.|+=|.||.+---+|++++.++
T Consensus 144 v~~~~P~NPtG~~~~~~~l~~i~-~~~~~ii~De~y~~~~~~~~~~~-~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~ 221 (337)
T PRK03967 144 VFICSPNNPTGNLQPEEEILKVL-ETGKPVVLDEAYAEFSGKSLIGL-IDEYPNLILLRTFSKAFGLAGIRAGYAIANEE 221 (337)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHH-hcCCEEEEECchhhhcccchHHH-HhhCCCEEEEecchHhhcchhhhheeeecCHH
Confidence 88899999999999998665 56 479999999863 222211111 11111126678999999942122888887655
Q ss_pred CCc
Q 007454 324 TVP 326 (603)
Q Consensus 324 ~~~ 326 (603)
+++
T Consensus 222 ~i~ 224 (337)
T PRK03967 222 IID 224 (337)
T ss_pred HHH
Confidence 443
No 194
>PLN00175 aminotransferase family protein; Provisional
Probab=98.96 E-value=1.4e-07 Score=103.27 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=81.2
Q ss_pred HHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEec
Q 007454 204 RTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDA 279 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDA 279 (603)
..++..|++++.++++.++..++.++|++.+.. +++++.++.-+|.||.+++.+. +++|++++++|++|-
T Consensus 154 ~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~------~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De 227 (413)
T PLN00175 154 ATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTS------KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDE 227 (413)
T ss_pred HHHHHcCCEEEEEECCcccCCCCHHHHHHhcCc------CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEec
Confidence 345667999999988633467889999998863 5889999999999999998653 346889999999998
Q ss_pred cccC---CCCCCC-CCCCC-CCCcEEEEcccccCCCCCCceEEEEEeCCCCc
Q 007454 280 CALG---PKDMDS-FGLSL-VRPDFLICSFYQIFGENPSGFGCLFVKKSTVP 326 (603)
Q Consensus 280 aq~~---~~~m~~-ldls~-~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~ 326 (603)
+-.. .....+ ..+.. ....+++.||=|.||.+---+|.++..+.++.
T Consensus 228 ~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~ 279 (413)
T PLN00175 228 VYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 279 (413)
T ss_pred ccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHH
Confidence 6311 110011 11211 23457889999999852112798887765543
No 195
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=98.95 E-value=1.7e-07 Score=101.93 Aligned_cols=141 Identities=12% Similarity=0.106 Sum_probs=93.7
Q ss_pred HHHHHHHHHHcCC------CCCcEEEeccC-chH---------------------HHHHHHHHHcCCEEEEEeccC-Ccc
Q 007454 173 SAMKKRIMDFLNI------SENDYVYDYES-EAV---------------------EAMIRTSEKRGARVMSAEFSW-PRL 223 (603)
Q Consensus 173 ~~aR~~Ia~~lna------~~~e~vf~~es-~sV---------------------~~~~~~a~~~Ga~V~~~~~~~-~~g 223 (603)
.+.|+.|++++|. ++++++++..+ +++ ......++..|+++..++++. .++
T Consensus 76 ~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 155 (403)
T TIGR01265 76 LAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDW 155 (403)
T ss_pred HHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCC
Confidence 4689999999984 56778765321 111 112334566788888887642 245
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccH---H-HHHHHHhCCcEEEEecccc----CCCCCCCCCCCCC
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY---L-WMRIAQENDWHILIDACAL----GPKDMDSFGLSLV 295 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl---~-~i~~a~e~g~~vlvDAaq~----~~~~m~~ldls~~ 295 (603)
.++.+++++++.. +++++.+++.+|.||..+|. + ++..|+++|+++++|.+-. .+.. ...+..+
T Consensus 156 ~~d~~~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~--~~~~~~~ 227 (403)
T TIGR01265 156 EIDLDGLEALADE------KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAP--FIPMASF 227 (403)
T ss_pred ccCHHHHHHHhCc------CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCC--ccchhhh
Confidence 7899999888753 58899999999999999984 4 3357899999999999732 1110 1122222
Q ss_pred CC---cEEEEcccccCCCCCCceEEEEEe
Q 007454 296 RP---DFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 296 ~~---Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
.. =.++.|+=|.||.|--.+|.+++.
T Consensus 228 ~~~~~vi~~~S~SK~~~~pGlRiG~~v~~ 256 (403)
T TIGR01265 228 ASIVPVLSLGGISKRWVVPGWRLGWIIIH 256 (403)
T ss_pred ccCCcEEEEeecccccCCCcceEEEEEEe
Confidence 22 256679999988531228888875
No 196
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=98.95 E-value=1.1e-06 Score=95.12 Aligned_cols=94 Identities=15% Similarity=0.231 Sum_probs=62.7
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCcccccc-ccccHH---HH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCC
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTG-ARYPYL---WM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVR 296 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG-~~~pl~---~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~ 296 (603)
.+.++|++.|.. ++++|.+...+|.+| ..+|-+ .+ ++|+++|+++++|-++.+ +.. +...+.....
T Consensus 163 ~d~~~l~~~l~~------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~ 236 (389)
T PRK01278 163 GDIEALKAAITP------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVT 236 (389)
T ss_pred CCHHHHHHhhCC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCC
Confidence 367888888752 578888887888899 455544 33 368999999999998662 221 1122222346
Q ss_pred CcEEEEcccccCCCCCCc--eEEEEEeCCCCcCcC
Q 007454 297 PDFLICSFYQIFGENPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 297 ~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~ 329 (603)
||.++ +=|.+| + | +|+++.+++.++.+.
T Consensus 237 pdi~t--~sK~l~--~-G~~ig~~~~~~~~~~~~~ 266 (389)
T PRK01278 237 PDIMA--VAKGIG--G-GFPLGACLATEEAAKGMT 266 (389)
T ss_pred CCEEE--Eehhcc--C-CcceEEEEEcHHHHhccC
Confidence 88765 459887 2 5 899998877655443
No 197
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=98.95 E-value=6.2e-08 Score=109.03 Aligned_cols=139 Identities=17% Similarity=0.233 Sum_probs=94.1
Q ss_pred HHHHHHHHHHc------CCCCCcEEEeccCc-hHHH---------------------HHHHHHHcCCEEEEEeccCC-cc
Q 007454 173 SAMKKRIMDFL------NISENDYVYDYESE-AVEA---------------------MIRTSEKRGARVMSAEFSWP-RL 223 (603)
Q Consensus 173 ~~aR~~Ia~~l------na~~~e~vf~~es~-sV~~---------------------~~~~a~~~Ga~V~~~~~~~~-~g 223 (603)
...|+.|++++ ++++++++.+..+. ++.. ....++..|++++.++.+.. +.
T Consensus 188 ~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~ 267 (517)
T PRK13355 188 FSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEW 267 (517)
T ss_pred HHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCC
Confidence 47899999998 78889997764321 2211 12334566888888877532 34
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEeccc----cCCCCCCCCCCCCC
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACA----LGPKDMDSFGLSLV 295 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq----~~~~~m~~ldls~~ 295 (603)
.++.++|++.+.. +|+++++..-+|.||.++|.+ ++.+|++++++|++|-+- +-++. ...+..+
T Consensus 268 ~~d~~~l~~~~~~------~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~--~~s~~~~ 339 (517)
T PRK13355 268 YPDIDDIRSKITS------RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLE--HTSIASL 339 (517)
T ss_pred CCCHHHHHHhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCC--cccHHHh
Confidence 6889999988853 688888888899999999954 335689999999999862 12220 1122223
Q ss_pred CCcE--E-EEcccccCCCCCCc--eEEEEEe
Q 007454 296 RPDF--L-ICSFYQIFGENPSG--FGCLFVK 321 (603)
Q Consensus 296 ~~Df--l-v~S~hK~fG~~P~G--~G~L~vk 321 (603)
.+|. + +.|+-|.|| ..| +|.+++.
T Consensus 340 ~~~~~vi~~~S~SK~~~--~~G~RiG~~i~~ 368 (517)
T PRK13355 340 APDLFCVTFSGLSKSHM--IAGYRIGWMILS 368 (517)
T ss_pred CCCCeEEEEecchhhcc--CcccceEEEEee
Confidence 3453 2 368899998 447 7888864
No 198
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.95 E-value=4.7e-07 Score=98.64 Aligned_cols=215 Identities=13% Similarity=0.136 Sum_probs=133.3
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
+.++|++.|.+ ++.+|.+-.+..+.|.+.| ++.+ ++|+++|+++++|-+|.+ |.. |...+.-...|
T Consensus 168 d~~~l~~~l~~------~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~P 241 (395)
T PRK03715 168 DIASVEKLITD------KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEP 241 (395)
T ss_pred hHHHHHHHcCC------CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCC
Confidence 46777777742 5777777778888999887 7755 479999999999998763 110 10111123469
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 298 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
|+++++ |-+|. .--+|++++++++.. +.+...+++ + .| |
T Consensus 242 Di~t~g--K~lg~-G~p~~av~~~~~i~~-~~~~~~~~T--------------------------------~-~g--~-- 280 (395)
T PRK03715 242 DIMTLG--KGIGG-GVPLAALLAKAEVAV-FEAGDQGGT--------------------------------Y-NG--N-- 280 (395)
T ss_pred ceeeeh--hhhhC-CcceEEEEEcccccc-ccCCCcCCC--------------------------------C-CC--C--
Confidence 998886 87653 122889999888742 221111111 0 11 1
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
+++++ +++ ++|+.+++ +.+.++++.+.++|.++|+++..
T Consensus 281 -pl~~a------------aal-------------------------a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~ 319 (395)
T PRK03715 281 -PLMTA------------VGV-------------------------AVISQLLA---PGFLEGVRARGEYLKEKLLELSE 319 (395)
T ss_pred -HHHHH------------HHH-------------------------HHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhh
Confidence 11111 011 46776654 45677888899999999987642
Q ss_pred CCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcC---CcEEeeCcccCccCCchhhhhhHHHHHhh
Q 007454 458 PNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRE---NISLSYGSLHHIWFSDKYQKEKDNVLEKT 534 (603)
Q Consensus 458 ~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~---gI~lr~G~~C~~~~~~~~~~~~~~~l~~~ 534 (603)
.. +...| ..+|.++.+-+.+..+ ..+.+.+.+. ||.++..
T Consensus 320 ~~--~i~~v--------rG~Glm~~i~l~~~~~-----~~~~~~~~~~~~~Gi~~~~~---------------------- 362 (395)
T PRK03715 320 ER--GLEGE--------RGEGLLRALLLGKDIG-----PQIVEKARDMQPDGLLLNAP---------------------- 362 (395)
T ss_pred cC--CcCeE--------EcceeEEEEEecCchH-----HHHHHHHHhccCCCEEEeec----------------------
Confidence 11 11111 1357888888865211 2234444444 7765310
Q ss_pred hcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 535 DREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
...+||+++.+..|.+||+++++.|.+.++.
T Consensus 363 ------------------~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~ 393 (395)
T PRK03715 363 ------------------RPNLLRFMPALNVTTEEIDQMIAMLRSVLDK 393 (395)
T ss_pred ------------------CCCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 0148999999999999999999999988764
No 199
>PRK07050 cystathionine beta-lyase; Provisional
Probab=98.95 E-value=2.7e-08 Score=108.27 Aligned_cols=101 Identities=11% Similarity=0.014 Sum_probs=74.2
Q ss_pred HHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCC
Q 007454 206 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGP 284 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~ 284 (603)
++..|+++..++.. +.++|++.|. ++|+||.+...+|.+|.+.+++.| ++|+++|+.|++|+++..|
T Consensus 125 ~~~~Gi~v~~vd~~------~~~~l~~~i~------~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~ 192 (394)
T PRK07050 125 ARDFGITVRFYDPL------IGAGIADLIQ------PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAG 192 (394)
T ss_pred HHhcCeEEEEECCC------CHHHHHHhcC------CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccc
Confidence 34456666555432 2466777775 368999999999999999999966 5899999999999998887
Q ss_pred CCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeC
Q 007454 285 KDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKK 322 (603)
Q Consensus 285 ~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk 322 (603)
....++ .+++|+++.|+.|++++ ..+ .|+++.++
T Consensus 193 ~~~~~l---~~GaDi~v~S~tK~~~g-~~~~~gG~v~~~~ 228 (394)
T PRK07050 193 LAFKPF---EHGVDISVQALTKYQSG-GSDVLMGATITAD 228 (394)
T ss_pred cccCHH---HcCCeEEEEECCceecC-CCCeeEEEEEECC
Confidence 522233 35789999999999874 334 56566543
No 200
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=98.94 E-value=2.2e-07 Score=99.51 Aligned_cols=143 Identities=14% Similarity=0.150 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHcCCCCCcEEEeccCc-h-------------------HHHHHHHHHHcCCEEEEEeccCCc-cccCHHHH
Q 007454 172 ESAMKKRIMDFLNISENDYVYDYESE-A-------------------VEAMIRTSEKRGARVMSAEFSWPR-LRINSEKL 230 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~vf~~es~-s-------------------V~~~~~~a~~~Ga~V~~~~~~~~~-g~i~~~~L 230 (603)
..+.|++|++++++++++++++..+. + -......++..|+++..++.+..+ ..++ +++
T Consensus 56 ~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~~~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~ 134 (354)
T PRK06358 56 YLELRKRIASFEQLDLENVILGNGATELIFNIVKVTKPKKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIV 134 (354)
T ss_pred HHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhCCCcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHH
Confidence 35899999999999999998764321 1 112234456678898888875222 3567 555
Q ss_pred HHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEecccc--C--CCCCCCCC-CCCCCCcEEE
Q 007454 231 RKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL--G--PKDMDSFG-LSLVRPDFLI 301 (603)
Q Consensus 231 ~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq~--~--~~~m~~ld-ls~~~~Dflv 301 (603)
.+.+.. +++++.++.-+|.||..++.+ +++.|+++++++++|.+-. . +.....+. +....-=+++
T Consensus 135 ~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~ 208 (354)
T PRK06358 135 LEEIKE------EIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIII 208 (354)
T ss_pred HHhhcc------CCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEE
Confidence 555532 478877777799999999965 3346789999999998631 1 11000111 1111112677
Q ss_pred EcccccCCCCCCceEEEEEe
Q 007454 302 CSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 302 ~S~hK~fG~~P~G~G~L~vk 321 (603)
.|+=|.||.+-.-+|.+++.
T Consensus 209 ~S~SK~~gl~G~RiG~lv~~ 228 (354)
T PRK06358 209 RAFTKFFAIPGLRLGYGLTS 228 (354)
T ss_pred EechhhccCcchhheeeecC
Confidence 89999998532237777653
No 201
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=98.93 E-value=9.2e-07 Score=95.30 Aligned_cols=93 Identities=16% Similarity=0.252 Sum_probs=64.8
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
+.++|++.+. +++.+|++-.+.+.+|.+.| ++.+ ++|+++|+++++|.++.+ +.. +.+.......|
T Consensus 154 dl~~l~~~l~------~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~p 227 (375)
T PRK04260 154 DLNSVKALVN------KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEP 227 (375)
T ss_pred CHHHHHHhcC------CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCC
Confidence 5677777664 25789999889999999877 5644 579999999999998642 211 11112233578
Q ss_pred cEEEEcccccCCCCCCc--eEEEEEeCCCCcCcC
Q 007454 298 DFLICSFYQIFGENPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~ 329 (603)
|.+ ++-|.+| | | +|+++.+++..+.+.
T Consensus 228 di~--t~sK~l~--~-G~~ig~~~~~~~~~~~~~ 256 (375)
T PRK04260 228 DIF--TLAKGLA--N-GVPVGAMLAKSSLGGAFG 256 (375)
T ss_pred CEE--Eeccccc--C-CcceEEEEEcHHHHhhcC
Confidence 954 7889887 3 4 899999887654443
No 202
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=98.93 E-value=1.6e-07 Score=100.87 Aligned_cols=147 Identities=11% Similarity=0.148 Sum_probs=95.4
Q ss_pred HHHHHHHHHHc------CCCCCcEEEeccCc-hHHHH---------------------HHHHHHcCCEEEEEeccCCccc
Q 007454 173 SAMKKRIMDFL------NISENDYVYDYESE-AVEAM---------------------IRTSEKRGARVMSAEFSWPRLR 224 (603)
Q Consensus 173 ~~aR~~Ia~~l------na~~~e~vf~~es~-sV~~~---------------------~~~a~~~Ga~V~~~~~~~~~g~ 224 (603)
...|+.|++++ ++++++++.+..++ ++..+ ...++..|.++..++.+ .+..
T Consensus 68 ~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~-~~~~ 146 (368)
T PRK03317 68 VALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRA-ADFT 146 (368)
T ss_pred HHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccC-CCCC
Confidence 47888999998 57888887654332 22221 22344556666666553 3457
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccC----CCCCCCCCCCCCCCc-
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALG----PKDMDSFGLSLVRPD- 298 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~----~~~m~~ldls~~~~D- 298 (603)
++.++|++.+.. .+++++.+...+|.||..+|.+.+ ++++..++++++|-+... +. +..+.+....++
T Consensus 147 ~d~~~l~~~~~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~-~~~~~~~~~~~~~ 220 (368)
T PRK03317 147 LDVDAAVAAIAE-----HRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGT-PSALTLLPEYPRL 220 (368)
T ss_pred CCHHHHHHHHhc-----cCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCC-cCHHHHHHhCCCE
Confidence 889999998863 246777788889999999999866 477777899999986431 21 011122111344
Q ss_pred EEEEcccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 299 FLICSFYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 299 flv~S~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
+++.||-|.||. | | +|+++..+++++.+
T Consensus 221 i~~~SfSK~~g~-~-GlRiG~~~~~~~~~~~l 250 (368)
T PRK03317 221 VVSRTMSKAFAF-A-GGRLGYLAAAPAVVDAL 250 (368)
T ss_pred EEEEechhhhcc-c-hhhhhhhhCCHHHHHHH
Confidence 455699999984 2 6 58887766554433
No 203
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=98.93 E-value=1.1e-06 Score=94.94 Aligned_cols=149 Identities=14% Similarity=0.253 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEecc-CchHHHHHHHHHHcC-------CEEEEEeccCC--------------------
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDYE-SEAVEAMIRTSEKRG-------ARVMSAEFSWP-------------------- 221 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~e-s~sV~~~~~~a~~~G-------a~V~~~~~~~~-------------------- 221 (603)
....+..++++++.+. ++++|... ++++...+..++..+ .+|......+.
T Consensus 81 ~~~~~la~~l~~~~~~--~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 158 (396)
T PRK02627 81 EPQEELAEKLVELSGM--DKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFE 158 (396)
T ss_pred HHHHHHHHHHHhhcCC--CEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCC
Confidence 3445666777777654 57766643 346666566555433 23433221110
Q ss_pred --cccc------CHHHHHHHHhhcCCCCCCeeEEEEeCcccccc-ccccHH---HH-HHHHhCCcEEEEecccc-CCCC-
Q 007454 222 --RLRI------NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTG-ARYPYL---WM-RIAQENDWHILIDACAL-GPKD- 286 (603)
Q Consensus 222 --~g~i------~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG-~~~pl~---~i-~~a~e~g~~vlvDAaq~-~~~~- 286 (603)
...+ +.++|++.+. +++++|.+....|.+| ..+|-+ .+ ++|+++|+++++|-++. .+..
T Consensus 159 ~~~~~~~~~~~~d~~~l~~~i~------~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g 232 (396)
T PRK02627 159 PLVEGFIYVPFNDIEALKAAIT------DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTG 232 (396)
T ss_pred CCCCCceEeCCCCHHHHHHhcC------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccC
Confidence 0112 6788888874 2578888877788898 455543 33 46899999999999865 2221
Q ss_pred -CCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcC
Q 007454 287 -MDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 287 -m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~ 329 (603)
+..++.....+|.+++| |.+| +.--+|+++.++++++.+.
T Consensus 233 ~~~~~~~~~~~pdi~t~s--K~~~-~G~rig~~~~~~~~~~~~~ 273 (396)
T PRK02627 233 KLFAYQHYGIEPDIMTLA--KGLG-GGVPIGAVLAKEKVADVFT 273 (396)
T ss_pred ceeeehhcCCCCCEEEEc--chhh-CCcccEEEEEcHHHHhccC
Confidence 11232334468977665 9888 2223899998887665443
No 204
>PLN02955 8-amino-7-oxononanoate synthase
Probab=98.93 E-value=2.7e-07 Score=101.89 Aligned_cols=106 Identities=14% Similarity=0.126 Sum_probs=74.2
Q ss_pred CCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCC
Q 007454 210 GARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMD 288 (603)
Q Consensus 210 Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~ 288 (603)
|+++...+.+ |.++|+++|...+ .+..+|++-.+-++.|.+.|++++ ++++++|++++||=+...+. +.
T Consensus 225 ~a~~~~f~HN------D~~~Le~~L~~~~---~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv-~G 294 (476)
T PLN02955 225 NVEVFVYRHC------DMYHLNSLLSSCK---MKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFV-CG 294 (476)
T ss_pred CceEEEeCCC------CHHHHHHHHHhCC---CCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCce-ec
Confidence 4666665432 6889999986421 245788888899999999999866 58899999999997665432 01
Q ss_pred --------CCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcC
Q 007454 289 --------SFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 289 --------~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~ 329 (603)
.+++. -.+|+++.++=|.||. . -|++..++++++.|+
T Consensus 295 ~~G~G~~e~~g~~-~di~ii~~TLsKA~G~-~--GGfi~gs~~~~~~l~ 339 (476)
T PLN02955 295 ENGGGVAEEFNCE-ADVDLCVGTLSKAAGC-H--GGFIACSKKWKQLIQ 339 (476)
T ss_pred CCCCcHHHHhCCC-CCCcEEEEeCccchhc-c--CceeecHHHHHHHHH
Confidence 13333 3689999999999994 2 244555665554443
No 205
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=98.93 E-value=1.7e-07 Score=101.78 Aligned_cols=142 Identities=12% Similarity=0.088 Sum_probs=95.1
Q ss_pred HHHHHHHHHHcC-----CCCCcEEEeccCc-h---------------------HHHHHHHHHHcCCEEEEEeccCC-ccc
Q 007454 173 SAMKKRIMDFLN-----ISENDYVYDYESE-A---------------------VEAMIRTSEKRGARVMSAEFSWP-RLR 224 (603)
Q Consensus 173 ~~aR~~Ia~~ln-----a~~~e~vf~~es~-s---------------------V~~~~~~a~~~Ga~V~~~~~~~~-~g~ 224 (603)
.+.|+.|+++++ +++++++.+..+. + -......++..|++|..++++.. +..
T Consensus 76 ~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~ 155 (401)
T TIGR01264 76 LSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWE 155 (401)
T ss_pred HHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCC
Confidence 367888999887 6777886643221 1 11223455678999988887522 357
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEecccc--C--CCCCCCCCCCCCC
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL--G--PKDMDSFGLSLVR 296 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq~--~--~~~m~~ldls~~~ 296 (603)
++.++|++.+.. +++++.++.-+|.||..++.+ +++.|+++|++|++|-+-. . +.. ...+..+.
T Consensus 156 ~d~~~l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~ 227 (401)
T TIGR01264 156 IDLKQLESLIDE------KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGAT--FEPLASLS 227 (401)
T ss_pred CCHHHHHHHhcc------CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcc--cccHHHcC
Confidence 899999888753 578889999999999999864 2346789999999998632 1 211 12222222
Q ss_pred C---cEEEEcccccCCCCCCceEEEEEeC
Q 007454 297 P---DFLICSFYQIFGENPSGFGCLFVKK 322 (603)
Q Consensus 297 ~---Dflv~S~hK~fG~~P~G~G~L~vkk 322 (603)
. =+++.||=|.||.+---+|.+++.+
T Consensus 228 ~~~~vi~~~SfSK~~~~~GlRiG~iv~~~ 256 (401)
T TIGR01264 228 STVPILSCGGLAKRWLVPGWRLGWIIIHD 256 (401)
T ss_pred CCCcEEEEccCcccCCCccceEEEEEecC
Confidence 2 2678999999885312288888753
No 206
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=98.93 E-value=8.3e-08 Score=103.37 Aligned_cols=138 Identities=8% Similarity=0.107 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHcCCCCCcEEEecc-CchHHHHHHHHHHcCCEEEEEeccC-----------Cc------cccCHHHHHHH
Q 007454 172 ESAMKKRIMDFLNISENDYVYDYE-SEAVEAMIRTSEKRGARVMSAEFSW-----------PR------LRINSEKLRKM 233 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~vf~~e-s~sV~~~~~~a~~~Ga~V~~~~~~~-----------~~------g~i~~~~L~~~ 233 (603)
..+.+++|+++.|.. ..+.... ..++..+.. +-+.|.+|....... +. ...+.+++++.
T Consensus 56 ~~~le~~lA~leg~~--~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 132 (364)
T PRK07269 56 RAKLEETLAAIESAD--YALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEELIAA 132 (364)
T ss_pred HHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHHHHh
Confidence 456788899998742 3322222 234443333 335677776542210 00 12356777777
Q ss_pred HhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCC
Q 007454 234 VVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENP 312 (603)
Q Consensus 234 l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P 312 (603)
|. ++|++|.+...+|.||...|++.| ++|+++|+.|++|.+...|..-.++ .+++|++++|++|++|+ +
T Consensus 133 i~------~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl---~~gaDivv~S~tK~l~g-~ 202 (364)
T PRK07269 133 IE------EDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPI---ELGADIVLHSATKYLSG-H 202 (364)
T ss_pred cC------cCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch---hhCCcEEEecCceeccC-C
Confidence 75 368999999999999999999955 5899999999999996655311233 36899999999999985 4
Q ss_pred Cc--eEEEEEeC
Q 007454 313 SG--FGCLFVKK 322 (603)
Q Consensus 313 ~G--~G~L~vkk 322 (603)
.. -|+++.++
T Consensus 203 ~d~~gG~v~~~~ 214 (364)
T PRK07269 203 NDVLAGVVVTND 214 (364)
T ss_pred CcccceEEEeCc
Confidence 44 35545443
No 207
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=98.92 E-value=2.7e-07 Score=99.41 Aligned_cols=197 Identities=13% Similarity=0.123 Sum_probs=120.1
Q ss_pred CCCCchhHHHHHHhhccCcCCCCceeeecCCCCC-CCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccc
Q 007454 86 QYFDTYQIDQIRAKEYYQLSLSNHTCLDYFGIGL-FSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLH 164 (603)
Q Consensus 86 ~y~~~~~vd~iR~~efp~L~~~~~vYLDyaa~tl-~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~ 164 (603)
.|.....+..+++ .|.. ++.+.|+.+-..+ +|+.+++++.+.+... ...|..
T Consensus 12 ~~~~~~~~~~~~~-~~~~---~~~i~l~~nen~~~~~~~v~~a~~~~~~~~-------------------~~Yp~~---- 64 (366)
T PRK01533 12 PYKPGKSPEQMKE-VYGD---HSFVKLASNENPFGCSPRVLDELQKSWLDH-------------------ALYPDG---- 64 (366)
T ss_pred CCCCCCChHHHHH-hcCC---CceEEeCCCCCCCCCCHHHHHHHHHHHHhc-------------------CcCCCC----
Confidence 3433334444554 2432 4578888766553 5677888776432110 000111
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCCcEEEeccCc-h---------------------HHHHHHHHHHcCCEEEEEeccCCc
Q 007454 165 GGQESGLESAMKKRIMDFLNISENDYVYDYESE-A---------------------VEAMIRTSEKRGARVMSAEFSWPR 222 (603)
Q Consensus 165 g~~~~~~~~~aR~~Ia~~lna~~~e~vf~~es~-s---------------------V~~~~~~a~~~Ga~V~~~~~~~~~ 222 (603)
+ ..+.|+.|++++|+++++++++..+. + -......++..|+++..++.+ +
T Consensus 65 -g-----~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~--~ 136 (366)
T PRK01533 65 -G-----ATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN--N 136 (366)
T ss_pred -C-----HHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC--C
Confidence 1 24799999999999999998764321 1 112234456778999988875 4
Q ss_pred cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-H---HHhCCcEEEEeccc--cCCC-CC-CCCC-CC
Q 007454 223 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-I---AQENDWHILIDACA--LGPK-DM-DSFG-LS 293 (603)
Q Consensus 223 g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~---a~e~g~~vlvDAaq--~~~~-~m-~~ld-ls 293 (603)
+.++.++|++.+.. +++++.++.-+|.||.++|.+.+. + |+++++ +++|-+- +... .. ..+. +.
T Consensus 137 ~~~d~~~l~~~~~~------~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~~-~iiDe~y~~~~~~~~~~~~~~~~~ 209 (366)
T PRK01533 137 GVYDLDEISSVVDN------DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENTL-IVIDEAYYEYVTAKDFPETLPLLE 209 (366)
T ss_pred CCcCHHHHHHHhCc------CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCCE-EEEEccHHHhhccccCcchhHHhc
Confidence 56899999988753 578889999999999999997553 3 345564 6678652 2111 00 0111 11
Q ss_pred CCCCcEEEEcccccCCCCCCc--eEEEEEeCCCCc
Q 007454 294 LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVP 326 (603)
Q Consensus 294 ~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~ 326 (603)
..+--+++-||=|.||. .| +|.++..+++++
T Consensus 210 ~~~~vi~~~SfSK~~~l--~GlRiG~~i~~~~~~~ 242 (366)
T PRK01533 210 KHKNILVLRTFSKAYGL--ASFRVGYAVGHEELIE 242 (366)
T ss_pred cCCCEEEEeCchHHhcC--hHHHHhHHhCCHHHHH
Confidence 12234788899999984 36 677766554443
No 208
>PRK06107 aspartate aminotransferase; Provisional
Probab=98.92 E-value=1.8e-07 Score=101.82 Aligned_cols=150 Identities=11% Similarity=0.109 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHcCC--CCCcEEEeccC-chHHHHHHH---------------------HHHcCCEEEEEeccC-Cccc
Q 007454 170 GLESAMKKRIMDFLNI--SENDYVYDYES-EAVEAMIRT---------------------SEKRGARVMSAEFSW-PRLR 224 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna--~~~e~vf~~es-~sV~~~~~~---------------------a~~~Ga~V~~~~~~~-~~g~ 224 (603)
++.+.+.+.+.+.+|. ++++++++... +++..+... ....|.++..++.+. .+..
T Consensus 74 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~ 153 (402)
T PRK06107 74 ALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFK 153 (402)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCC
Confidence 3445555566666676 57788776542 233322222 223345555555432 1245
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhC-CcEEEEecccc----CCC---CCCCCCC
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQEN-DWHILIDACAL----GPK---DMDSFGL 292 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~-g~~vlvDAaq~----~~~---~m~~ldl 292 (603)
++.++|++.+.. +++++.++.-+|.||..+|.+. ++.|+++ |+++++|-+-. -+. .|..++-
T Consensus 154 ~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~ 227 (402)
T PRK06107 154 LTPEALEAAITP------RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAP 227 (402)
T ss_pred CCHHHHHhhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCc
Confidence 788888888752 5788888888999999999853 3457887 99999996421 111 0111111
Q ss_pred CCCCCcEEEEcccccCCCCCCce--EEEEEeCCCCcC
Q 007454 293 SLVRPDFLICSFYQIFGENPSGF--GCLFVKKSTVPI 327 (603)
Q Consensus 293 s~~~~Dflv~S~hK~fG~~P~G~--G~L~vkk~~~~~ 327 (603)
....--+++.|+.|.|| ..|+ |+++..+++.+.
T Consensus 228 ~~~~~vi~~~S~SK~~~--~pGlRiG~~~~~~~~~~~ 262 (402)
T PRK06107 228 ELRDRVLVTNGVSKTYA--MTGWRIGYAAGPADLIAA 262 (402)
T ss_pred CccCCEEEEeccchhhc--CcccceeeeecCHHHHHH
Confidence 11123477889999998 4474 988876665433
No 209
>PRK05967 cystathionine beta-lyase; Provisional
Probab=98.91 E-value=7.6e-08 Score=104.58 Aligned_cols=91 Identities=10% Similarity=-0.015 Sum_probs=75.1
Q ss_pred HHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEecccc
Q 007454 204 RTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACAL 282 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~ 282 (603)
+.+++.|.+|..++.++ .+.|+++|.+ +|+||.+...+|.+|.+.|++.| ++|+++|++|++|.++.
T Consensus 122 ~~l~~~Gi~v~~vd~~~------~e~l~~al~~------~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a 189 (395)
T PRK05967 122 TMLKRLGVEVEYYDPEI------GAGIAKLMRP------NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWA 189 (395)
T ss_pred HHHHhcCeEEEEeCCCC------HHHHHHhcCc------CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCcc
Confidence 56778899999986542 4678888863 69999999999999999999965 58999999999999988
Q ss_pred CCCCCCCCCCCCCCCcEEEEcccccCC
Q 007454 283 GPKDMDSFGLSLVRPDFLICSFYQIFG 309 (603)
Q Consensus 283 ~~~~m~~ldls~~~~Dflv~S~hK~fG 309 (603)
.|-...|+ ++++|+++.|.-|+++
T Consensus 190 ~p~~~~pl---~~GaDivv~S~tKy~~ 213 (395)
T PRK05967 190 TPLYFRPL---DFGVDISIHAATKYPS 213 (395)
T ss_pred CceecChh---HcCCCEEEEecccccC
Confidence 87422344 4799999999999877
No 210
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=98.90 E-value=4.3e-07 Score=98.04 Aligned_cols=282 Identities=16% Similarity=0.163 Sum_probs=172.5
Q ss_pred CccccccchHHHHHHHHHHHHHHHcCCCCCcEEEecc---------------------CchHHHHHHHHHHcCCEEEEEe
Q 007454 159 KTQLLHGGQESGLESAMKKRIMDFLNISENDYVYDYE---------------------SEAVEAMIRTSEKRGARVMSAE 217 (603)
Q Consensus 159 ~s~~~~g~~~~~~~~~aR~~Ia~~lna~~~e~vf~~e---------------------s~sV~~~~~~a~~~Ga~V~~~~ 217 (603)
.|....|.. .+..+.=++||+|+|.+ +-++|... --++..|+..++-.+++++...
T Consensus 75 gsR~i~G~~--~~h~~LE~~lA~f~g~e-~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~ 151 (388)
T COG0156 75 GSRLISGTS--DLHVELEEELADFLGAE-AALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFK 151 (388)
T ss_pred CcCcccCCc--HHHHHHHHHHHHHhCCC-cEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEec
Confidence 344334432 44556777899999985 33443210 0123335666666677776653
Q ss_pred ccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH-HHHHHhCCcEEEEeccccCCCCCC--------
Q 007454 218 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW-MRIAQENDWHILIDACALGPKDMD-------- 288 (603)
Q Consensus 218 ~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~-i~~a~e~g~~vlvDAaq~~~~~m~-------- 288 (603)
= .|.++|+++|...+....+.+++++=.+-.+.|.+-|+.. +.+++++|++++||=+..+|. +.
T Consensus 152 H------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv-~G~~GrG~~e 224 (388)
T COG0156 152 H------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGV-LGPNGRGLAE 224 (388)
T ss_pred C------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccc-cCCCCccHHH
Confidence 2 4679999999752211115789999999999999999985 568999999999997765553 11
Q ss_pred CCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC-CCcCcCCCCCCCceeccccccccccccccCCCCCCcccCccccc
Q 007454 289 SFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKS-TVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQ 367 (603)
Q Consensus 289 ~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~-~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 367 (603)
.+++....+|+++.++-|-|| +.|+.+.-.. +.+-|... + .. + .
T Consensus 225 ~~g~~~~~vdi~~gTlsKAlG----s~Gg~v~g~~~~~d~L~~~--a---------r~-~------------------i- 269 (388)
T COG0156 225 HFGLEPEEVDIIVGTLGKALG----SSGGYIAGSAALIDYLRNR--A---------RP-F------------------I- 269 (388)
T ss_pred HhCCCCccceEEEEEchhhhc----ccCceeeCcHHHHHHHHHh--C---------Cc-e------------------e-
Confidence 244554567999999999999 4666655433 32322211 0 00 0 0
Q ss_pred ccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 007454 368 EKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINW 447 (603)
Q Consensus 368 ~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~ 447 (603)
|-.+.|+....+.+ ++|+++++ -....++++.++.+
T Consensus 270 -fStalpP~~aaa~~-----------------------------------------~al~~l~~--~~~~r~~L~~~~~~ 305 (388)
T COG0156 270 -FSTALPPAVAAAAL-----------------------------------------AALRILEE--GPERRERLQELAAF 305 (388)
T ss_pred -ccCCCCHHHHHHHH-----------------------------------------HHHHHHHh--CHHHHHHHHHHHHH
Confidence 11122222211111 57777764 35566778888888
Q ss_pred HHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhh
Q 007454 448 LVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEK 527 (603)
Q Consensus 448 L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~ 527 (603)
+...++.+. .+ +++ ...||+.+.+.|..- ....-..|.++ ||.++.... |-
T Consensus 306 ~~~~~~~~~------~~----~~~----s~s~I~pv~~gd~~~---a~~~s~~l~~~-Gi~v~~i~~--PT--------- 356 (388)
T COG0156 306 FRSLLKALG------LV----LLP----SESPIIPVILGDEER---ALEASRALLEE-GIYVSAIRP--PT--------- 356 (388)
T ss_pred HHHHHHhcC------Cc----cCC----CCCCeeeeEeCCHHH---HHHHHHHHHHC-CeeEeeecC--CC---------
Confidence 886555432 11 122 346889888877431 12334455555 998874311 10
Q ss_pred HHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 007454 528 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 580 (603)
Q Consensus 528 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~ 580 (603)
-..+..-+|+|+....|.+||++|++.+.+.
T Consensus 357 ----------------------Vp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 357 ----------------------VPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred ----------------------CCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 0123357999999999999999999998764
No 211
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=98.90 E-value=2.6e-07 Score=99.44 Aligned_cols=144 Identities=10% Similarity=0.149 Sum_probs=94.1
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCc-hH---------------------HHHHHHHHHcCCEEEEEeccCCccccCHHHH
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESE-AV---------------------EAMIRTSEKRGARVMSAEFSWPRLRINSEKL 230 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~-sV---------------------~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L 230 (603)
.+.|+.|++++++++++++++..+. ++ ......++..|.++..++++ .+ .++.+++
T Consensus 70 ~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~-~~-~~~~~~l 147 (369)
T PRK08153 70 HDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYR-DD-REDLDAL 147 (369)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCC-CC-CCCHHHH
Confidence 4799999999999999998764322 11 11222345568888888875 23 4677777
Q ss_pred HHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHH--hCCcEEEEeccc--cCCCCCCCCCCCCCC-CcEEEEcc
Q 007454 231 RKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQ--ENDWHILIDACA--LGPKDMDSFGLSLVR-PDFLICSF 304 (603)
Q Consensus 231 ~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~--e~g~~vlvDAaq--~~~~~m~~ldls~~~-~Dflv~S~ 304 (603)
.+.+.. .+++++.++.-+|.||.++|.+.+ ++++ ++++++++|-+- +.... ....+.... --+++.||
T Consensus 148 ~~~~~~-----~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~-~~~~~~~~~~~~i~~~Sf 221 (369)
T PRK08153 148 LDAARR-----ENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAG-AAPPIDTDDPNVIRMRTF 221 (369)
T ss_pred HHHhcc-----cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcc-cchhhhhcCCCEEEEecc
Confidence 766542 357888888889999999999844 3443 248899999752 22110 011122122 23778899
Q ss_pred cccCCCCCCc--eEEEEEeCCCCc
Q 007454 305 YQIFGENPSG--FGCLFVKKSTVP 326 (603)
Q Consensus 305 hK~fG~~P~G--~G~L~vkk~~~~ 326 (603)
=|.||. .| +|.++..+++++
T Consensus 222 SK~~g~--~GlRiG~~v~~~~~~~ 243 (369)
T PRK08153 222 SKAYGL--AGARVGYAIGAPGTIK 243 (369)
T ss_pred hHhccC--cchheeeeecCHHHHH
Confidence 999984 37 588887665543
No 212
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=98.89 E-value=2.3e-07 Score=99.77 Aligned_cols=139 Identities=19% Similarity=0.260 Sum_probs=95.4
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCc-h---------------------HHHHHHHHHHcCCEEEEEeccCCccccCHHHHH
Q 007454 174 AMKKRIMDFLNISENDYVYDYESE-A---------------------VEAMIRTSEKRGARVMSAEFSWPRLRINSEKLR 231 (603)
Q Consensus 174 ~aR~~Ia~~lna~~~e~vf~~es~-s---------------------V~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~ 231 (603)
..|+.|++++|+++++++++..+. + -......++..|+++..++.+ ++..++.++|+
T Consensus 75 ~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~l~ 153 (371)
T PRK05166 75 ALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVT-PDLGFDLDALC 153 (371)
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecC-CCCCCCHHHHH
Confidence 689999999999999998764321 1 112234456779999998886 45688999999
Q ss_pred HHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHH--hCCcEEEEeccc--cCCC-CCCC-CCC-CCCC-CcEEEE
Q 007454 232 KMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQ--ENDWHILIDACA--LGPK-DMDS-FGL-SLVR-PDFLIC 302 (603)
Q Consensus 232 ~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~--e~g~~vlvDAaq--~~~~-~m~~-ldl-s~~~-~Dflv~ 302 (603)
+.+.. +++++.++..+|.||.++|.+.+ ++++ +.+.++++|.+- +... ...+ +.+ .... --+++.
T Consensus 154 ~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~ 227 (371)
T PRK05166 154 AAVAR------APRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLR 227 (371)
T ss_pred Hhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEe
Confidence 88863 57899999999999999999754 3443 247889999862 1210 0001 111 1111 237889
Q ss_pred cccccCCCCCCc--eEEEEEe
Q 007454 303 SFYQIFGENPSG--FGCLFVK 321 (603)
Q Consensus 303 S~hK~fG~~P~G--~G~L~vk 321 (603)
||=|.||. .| +|.+++.
T Consensus 228 SfSK~~~l--~GlRiG~~i~~ 246 (371)
T PRK05166 228 TFSKAYGL--AGLRVGYGLVS 246 (371)
T ss_pred echHhhhc--chhheeeeecC
Confidence 99999984 36 7887764
No 213
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=98.89 E-value=2.8e-07 Score=101.40 Aligned_cols=150 Identities=13% Similarity=0.095 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEe-cc--------------------------CchHHHHHHHHHHcCCEEEEEec--c
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYD-YE--------------------------SEAVEAMIRTSEKRGARVMSAEF--S 219 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~-~e--------------------------s~sV~~~~~~a~~~Ga~V~~~~~--~ 219 (603)
..+.++.-+.+++++|++.-++.+. .. +.+.......+.-.|++++.++. +
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d 183 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLD 183 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeec
Confidence 4566777777888888764443221 11 11122233444556888888884 3
Q ss_pred CCccccCHHHHHHHHhhcCCCCCCeeEEEEeCc-cccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCC--C--
Q 007454 220 WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLH-SRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGL--S-- 293 (603)
Q Consensus 220 ~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~-Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldl--s-- 293 (603)
..+..++.++|+++|... .+++.++++... ...+|..-|++.| ++|+++|+++++|+|...+.. ....+ .
T Consensus 184 ~~~~~iD~e~Le~aIt~~---~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~-~~~~~~~~g~ 259 (444)
T TIGR03531 184 GDELTTDVEDIERAIEEI---GPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN-KYMELINKAI 259 (444)
T ss_pred CcCCCcCHHHHHHHHHhc---cCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh-hhhhhhhccc
Confidence 356889999999999742 113444444433 3444578899866 589999999999999776541 11111 1
Q ss_pred CC-CCcEEEEcccccCCCCCCceEEEEEeCC
Q 007454 294 LV-RPDFLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 294 ~~-~~Dflv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
.. ++|.+++|+||+|.. |.+-|+++.++.
T Consensus 260 ~~Grad~vv~s~hK~l~~-pg~Gg~I~~~d~ 289 (444)
T TIGR03531 260 KVGRVDAVVSSTDKNFMV-PVGGAIIYSFDE 289 (444)
T ss_pred cccCCCeEEEeCccCCCC-CCCEEEEEECCH
Confidence 12 479999999999886 777777777543
No 214
>PRK09082 methionine aminotransferase; Validated
Probab=98.88 E-value=1.8e-07 Score=101.23 Aligned_cols=113 Identities=13% Similarity=0.223 Sum_probs=80.0
Q ss_pred HHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEecc
Q 007454 205 TSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDAC 280 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAa 280 (603)
.++..|+++..++.+..+..++.+++++.+.. ++++++++..+|.||..++.+ +++.|+++|+++++|.+
T Consensus 131 ~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~ 204 (386)
T PRK09082 131 AIELAGGRAVRVALQPPDFRVDWQRFAAAISP------RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEV 204 (386)
T ss_pred HHHHcCCEEEEEecCcccccCCHHHHHHhcCc------cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehh
Confidence 34566899999998644678899999998853 578888988899999998764 33578999999999987
Q ss_pred cc----CCC-CCCCCCCCC-CCCcEEEEcccccCCCCCCc--eEEEEEeCCCC
Q 007454 281 AL----GPK-DMDSFGLSL-VRPDFLICSFYQIFGENPSG--FGCLFVKKSTV 325 (603)
Q Consensus 281 q~----~~~-~m~~ldls~-~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~ 325 (603)
-. .+. ......+.. .+-.+++.|+-|.||. .| +|+++..++++
T Consensus 205 y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~--~G~RiG~iv~~~~l~ 255 (386)
T PRK09082 205 YEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHV--TGWKVGYCVAPAALS 255 (386)
T ss_pred hhhhccCCCCCCChhhCcCccCcEEEEeechhhccc--hhhhhhhhhCCHHHH
Confidence 31 111 000111211 2356888999999984 37 68888765544
No 215
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=98.88 E-value=2.2e-07 Score=99.39 Aligned_cols=152 Identities=17% Similarity=0.118 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEeccC-chHHHHHHHHHHcCCEEEEEec---cCCc---------ccc-CHHHHHHHHh
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDYES-EAVEAMIRTSEKRGARVMSAEF---SWPR---------LRI-NSEKLRKMVV 235 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~es-~sV~~~~~~a~~~Ga~V~~~~~---~~~~---------g~i-~~~~L~~~l~ 235 (603)
+..++.++.+|+++|+++++++....+ +++..++......|.+|..... .++. .++ ...+++. +.
T Consensus 54 ~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~~~l~~-l~ 132 (346)
T TIGR03576 54 IFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFESDELSE-LK 132 (346)
T ss_pred HHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEEeccCCHHH-Hh
Confidence 677899999999999988887655432 3445555555566777654211 1110 011 1112222 21
Q ss_pred hcCCCCCCeeEEEEeCccccccccc---cHHHH-HHHHhCCcEEEEeccccCCCCC--CCCCCCCCCCcEEEEcccccCC
Q 007454 236 SKGKKKKQRGLFVFPLHSRMTGARY---PYLWM-RIAQENDWHILIDACALGPKDM--DSFGLSLVRPDFLICSFYQIFG 309 (603)
Q Consensus 236 ~~~~~~~~t~Lv~~~~~Sn~TG~~~---pl~~i-~~a~e~g~~vlvDAaq~~~~~m--~~ldls~~~~Dflv~S~hK~fG 309 (603)
. .++++++.++. ++++|.++ |++.+ ++|+++|++|++|-+...+... ..-.+..+++|+++.|++|.++
T Consensus 133 ~----~~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKala 207 (346)
T TIGR03576 133 K----IDGTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMD 207 (346)
T ss_pred h----CcCceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhcc
Confidence 1 12477888876 57899985 66644 5789999999999986654200 0111223468999999999873
Q ss_pred CCCCceEEEEEeCCCCcCcC
Q 007454 310 ENPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 310 ~~P~G~G~L~vkk~~~~~L~ 329 (603)
+ +. .|+++.++++++.|.
T Consensus 208 G-~r-~G~v~~~~~li~~l~ 225 (346)
T TIGR03576 208 G-PR-GGLLAGRKELVDKIK 225 (346)
T ss_pred c-cc-eEEEEeCHHHHHHHH
Confidence 2 65 588888877655444
No 216
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=98.88 E-value=1.9e-07 Score=100.51 Aligned_cols=132 Identities=11% Similarity=0.143 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHcCCCCCcEEEeccCchHHHH------------------------HHHHHHcCCEEEEEeccCCccccCH
Q 007454 172 ESAMKKRIMDFLNISENDYVYDYESEAVEAM------------------------IRTSEKRGARVMSAEFSWPRLRINS 227 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~------------------------~~~a~~~Ga~V~~~~~~~~~g~i~~ 227 (603)
.++.+++|+++.|++.. +++..-..++..+ ...+++.|+++..++. .+.
T Consensus 54 ~~~le~~la~l~g~~~~-~~~~sG~~ai~~~~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~------~d~ 126 (366)
T PRK08247 54 RGVLEQAIADLEGGDQG-FACSSGMAAIQLVMSLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT------ASL 126 (366)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC------CCH
Confidence 45677888888888543 5443322222222 2233345555555543 267
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccc
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQ 306 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK 306 (603)
++|+++|.+ +|+++.+..-+|.+|.+.+++.| ++|+++|+++++|.+...+....++ ..++|+++.|+.|
T Consensus 127 ~~l~~~i~~------~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~---~~g~di~i~S~sK 197 (366)
T PRK08247 127 KAIEQAITP------NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPL---EEGADIVIHSATK 197 (366)
T ss_pred HHHHHhccc------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCch---hcCCcEEEeecce
Confidence 788888753 68999998888999999999855 5899999999999987555311222 3579999999999
Q ss_pred cCCCCCCc-eEEEEE
Q 007454 307 IFGENPSG-FGCLFV 320 (603)
Q Consensus 307 ~fG~~P~G-~G~L~v 320 (603)
++|+ +.+ +|.+++
T Consensus 198 ~~~g-~~d~~~G~iv 211 (366)
T PRK08247 198 YLGG-HNDVLAGLVV 211 (366)
T ss_pred eccC-CCceeeeEEe
Confidence 9985 444 344444
No 217
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=98.88 E-value=5e-07 Score=95.80 Aligned_cols=143 Identities=13% Similarity=0.109 Sum_probs=90.5
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCc-h-------------------HHHHHHHHHHcCCEEEEEeccCCccccCHHHHHH
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESE-A-------------------VEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRK 232 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~-s-------------------V~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~ 232 (603)
.+.|++|++++|+++++++.+..+. + -......++..|+++..+|++. ..++.+.++
T Consensus 43 ~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~~~~~~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~--~~~~~~~l~- 119 (332)
T PRK06425 43 TDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSYINVGNIIIVEPNFNEYKGYAFTHGIRISALPFNL--INNNPEILN- 119 (332)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhCCCcEEEeCCChHHHHHHHHHcCCeEEEEeCCc--ccCcHHHHh-
Confidence 4789999999999998887654332 1 1222344566788888888752 223333332
Q ss_pred HHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEeccc--cCCCCCCC-CCC-CCCCCcEEEEcc
Q 007454 233 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACA--LGPKDMDS-FGL-SLVRPDFLICSF 304 (603)
Q Consensus 233 ~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq--~~~~~m~~-ldl-s~~~~Dflv~S~ 304 (603)
. .+++++.++.-+|.||..+|.+.+ +.|+++|.++++|-+= +......+ ..+ ...+-=.++-||
T Consensus 120 ---~-----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~Sf 191 (332)
T PRK06425 120 ---N-----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSL 191 (332)
T ss_pred ---h-----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeec
Confidence 1 257888888899999999997633 3578899999999751 22110001 111 111223566799
Q ss_pred cccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 305 YQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 305 hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
=|.||- .| +|.++..+++++.+
T Consensus 192 SK~~~l--~GlRiGy~v~~~~li~~l 215 (332)
T PRK06425 192 TKILGI--PSLRIGYIATDDYNMKIS 215 (332)
T ss_pred HHhcCC--chhhheeeecCHHHHHHH
Confidence 999994 37 68888776655433
No 218
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=98.87 E-value=8.8e-07 Score=95.21 Aligned_cols=149 Identities=9% Similarity=0.129 Sum_probs=96.5
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCc-h----------------------HHHHHHHHHHcCCEEEEEeccCC--ccccCH
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESE-A----------------------VEAMIRTSEKRGARVMSAEFSWP--RLRINS 227 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~-s----------------------V~~~~~~a~~~Ga~V~~~~~~~~--~g~i~~ 227 (603)
.+.|+.|++++|+++++++++..+. + -......++..|+++..++.+-+ ...++.
T Consensus 62 ~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~ 141 (364)
T PRK04781 62 PGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADV 141 (364)
T ss_pred HHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCH
Confidence 5899999999999999997754221 1 11222334567888888887311 234677
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHh--CCcEEEEeccc--cCCCCCCCCCC-CCCCCcEEE
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQE--NDWHILIDACA--LGPKDMDSFGL-SLVRPDFLI 301 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e--~g~~vlvDAaq--~~~~~m~~ldl-s~~~~Dflv 301 (603)
+++.+.+.. ++++++.++..+|.||.++|.+.+ ++++. .+++|++|.+= +.... ..+.+ ....-=+++
T Consensus 142 ~~l~~~~~~-----~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~-~~~~~~~~~~~vi~~ 215 (364)
T PRK04781 142 PAIVAAALA-----SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVP-SAVGLLARYDNLAVL 215 (364)
T ss_pred HHHHHHHhc-----cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCc-chHHHHhhCCCEEEE
Confidence 777655432 368999999999999999999844 34432 47889999862 22210 01111 122223778
Q ss_pred EcccccCCCCCCc--eEEEEEeCCCCcCcC
Q 007454 302 CSFYQIFGENPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 302 ~S~hK~fG~~P~G--~G~L~vkk~~~~~L~ 329 (603)
-||=|.||. .| +|.++..+++++.+.
T Consensus 216 ~SfSK~~gl--~GlRvGy~v~~~~l~~~l~ 243 (364)
T PRK04781 216 RTLSKAHAL--AAARIGSLIANAELIAVLR 243 (364)
T ss_pred ecChhhccc--ccceeeeeeCCHHHHHHHH
Confidence 899999994 26 788887766654443
No 219
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=98.86 E-value=1.7e-07 Score=98.12 Aligned_cols=101 Identities=14% Similarity=0.200 Sum_probs=70.8
Q ss_pred CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH----HHHhCCcEEEEeccccCCCCC--CCCCCCC
Q 007454 221 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR----IAQENDWHILIDACALGPKDM--DSFGLSL 294 (603)
Q Consensus 221 ~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~----~a~e~g~~vlvDAaq~~~~~m--~~ldls~ 294 (603)
++|++++++++..|.........+.++++--+.++-|++||++.++ .||++|..+|+|++-++-- + ..+++..
T Consensus 108 ~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA-~valg~~~~~ 186 (342)
T COG2008 108 ADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANA-LVALGVALKT 186 (342)
T ss_pred CCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHH-HHHcCCCHHH
Confidence 6899999999998875221233577777777777999999998653 5799999999998533210 0 1122332
Q ss_pred --CCCcEEEEcccccCCCCCCceEEEEE-eCCCC
Q 007454 295 --VRPDFLICSFYQIFGENPSGFGCLFV-KKSTV 325 (603)
Q Consensus 295 --~~~Dflv~S~hK~fG~~P~G~G~L~v-kk~~~ 325 (603)
-++|.+.+.+.|-.|. | .|++++ +++..
T Consensus 187 ~~~~~D~v~~~~tK~g~~-~--~gAiv~gn~~~~ 217 (342)
T COG2008 187 IKSYVDSVSFCLTKGGGA-P--VGAIVFGNRDFA 217 (342)
T ss_pred HHhhCCEEEEecccCCcc-e--eeeEEEcCHHHH
Confidence 3799999999999886 3 565554 44443
No 220
>PRK08175 aminotransferase; Validated
Probab=98.85 E-value=4.9e-07 Score=98.13 Aligned_cols=114 Identities=12% Similarity=0.058 Sum_probs=73.7
Q ss_pred HHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEeccc
Q 007454 206 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACA 281 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq 281 (603)
++..|+++..++.+. . ....++|++++... .++++++.+...+|.||.++|.+ ++++|+++|+++++|-+-
T Consensus 132 ~~~~g~~~~~v~~~~-~-~~~~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y 206 (395)
T PRK08175 132 AVIAGAQVRSVPLVE-G-VDFFNELERAIRES---YPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAY 206 (395)
T ss_pred HHHcCCeEEEEeccc-C-CCcHHHHHHHHhhc---cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecch
Confidence 345688888887763 2 22467888877631 23578888887899999999995 335789999999999753
Q ss_pred c--C--CCCCCCC-CCCC-CCCcEEEEcccccCCCCCCc--eEEEEEeCCCCc
Q 007454 282 L--G--PKDMDSF-GLSL-VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVP 326 (603)
Q Consensus 282 ~--~--~~~m~~l-dls~-~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~ 326 (603)
. . ++.+.++ .+.. .+..+++.|+=|.||. | | +|+++..+++++
T Consensus 207 ~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~-p-GlRiG~~~~~~~l~~ 257 (395)
T PRK08175 207 ADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNM-A-GWRIGFMVGNPELVS 257 (395)
T ss_pred HhhccCCCCCcchhcCCCcccCEEEEeeccccccC-c-chhheeeeCCHHHHH
Confidence 1 1 2110111 1111 1233567999999985 3 6 688876555443
No 221
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=98.85 E-value=1.2e-06 Score=96.62 Aligned_cols=107 Identities=16% Similarity=0.243 Sum_probs=79.2
Q ss_pred HHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCC
Q 007454 206 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGP 284 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~ 284 (603)
....|++++.++++..++.++.++|++.|.. +|+++++.+ .+|...+++.| ++|+++|+.|++|++|..|
T Consensus 128 v~~~G~~pv~vdvd~~~~~id~~~le~~i~~------~tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G 198 (438)
T PRK15407 128 IIQNGLVPVFVDVELPTYNIDASLLEAAVSP------KTKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALG 198 (438)
T ss_pred HHHcCCEEEEEecCCCcCCcCHHHHHHHcCc------CCeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchh
Confidence 3456899998888644678899999998863 688888876 47888899854 6899999999999999888
Q ss_pred CCCCCCCCCCCCCcEEEEcccc---cCCCCCCceEEEEEeCCCC
Q 007454 285 KDMDSFGLSLVRPDFLICSFYQ---IFGENPSGFGCLFVKKSTV 325 (603)
Q Consensus 285 ~~m~~ldls~~~~Dflv~S~hK---~fG~~P~G~G~L~vkk~~~ 325 (603)
......-+-.++ |+.+||||. |-.+ + | |+|+.+++.+
T Consensus 199 ~~~~g~~~G~~g-d~~~fSf~~~k~~~~g-e-G-G~l~t~d~~l 238 (438)
T PRK15407 199 STYDGRMTGTFG-DIATLSFYPAHHITMG-E-G-GAVFTNDPLL 238 (438)
T ss_pred hhcCCeeeeccC-ceEEEeCCCCCCcccc-C-c-eEEEECCHHH
Confidence 621111133455 999999985 3322 2 5 8888887654
No 222
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=98.85 E-value=4.6e-07 Score=99.00 Aligned_cols=142 Identities=11% Similarity=0.135 Sum_probs=93.7
Q ss_pred HHHHHHHHHHcC------------CCCCcEEEeccCc-hHH---------------------HHHHHHHHcCCEEEEEec
Q 007454 173 SAMKKRIMDFLN------------ISENDYVYDYESE-AVE---------------------AMIRTSEKRGARVMSAEF 218 (603)
Q Consensus 173 ~~aR~~Ia~~ln------------a~~~e~vf~~es~-sV~---------------------~~~~~a~~~Ga~V~~~~~ 218 (603)
.+.|+.|+++++ +++++++++..+. ++. .....++..|+++..++.
T Consensus 78 ~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~ 157 (412)
T PTZ00433 78 PEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNC 157 (412)
T ss_pred HHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEec
Confidence 368888888876 6678887654321 111 123445677899988887
Q ss_pred cC-CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEecccc--C--CCCCCC
Q 007454 219 SW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDACAL--G--PKDMDS 289 (603)
Q Consensus 219 ~~-~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDAaq~--~--~~~m~~ 289 (603)
+. .+..++.++|++.+.. +++++.++.-+|.||..++.+. ++.|+++|++|++|-+-. . +....+
T Consensus 158 ~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~ 231 (412)
T PTZ00433 158 RPEKDWEADLDEIRRLVDD------RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTS 231 (412)
T ss_pred CccccCcCCHHHHHHHhcc------CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccc
Confidence 52 1347889999888753 5788899999999999999753 346789999999998632 1 110001
Q ss_pred -CCCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 007454 290 -FGLSLVRPDFLICSFYQIFGENPSGFGCLFV 320 (603)
Q Consensus 290 -ldls~~~~Dflv~S~hK~fG~~P~G~G~L~v 320 (603)
..+.....=+++.||=|.||.+-.-+|.+++
T Consensus 232 ~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 232 VADFDTTVPRVILGGTAKNLVVPGWRLGWLLL 263 (412)
T ss_pred hhhccCCCceEEEccchhhcCCCCeeEEEEEE
Confidence 1111111226778999999853234788886
No 223
>PRK06348 aspartate aminotransferase; Provisional
Probab=98.82 E-value=6.9e-07 Score=96.60 Aligned_cols=146 Identities=17% Similarity=0.171 Sum_probs=92.8
Q ss_pred HHHHHHHHHc------CCCCCcEEEeccCc-hHHH---------------------HHHHHHHcCCEEEEEecc-CCccc
Q 007454 174 AMKKRIMDFL------NISENDYVYDYESE-AVEA---------------------MIRTSEKRGARVMSAEFS-WPRLR 224 (603)
Q Consensus 174 ~aR~~Ia~~l------na~~~e~vf~~es~-sV~~---------------------~~~~a~~~Ga~V~~~~~~-~~~g~ 224 (603)
..|+.|++++ ++++++++.+..+. ++.. ....++..|+++..++.. ..+..
T Consensus 70 ~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 149 (384)
T PRK06348 70 ELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQ 149 (384)
T ss_pred HHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCc
Confidence 5777777777 46788887764432 2111 233445567787777653 12345
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEecccc--C-CCCCCC-CCCCC-C
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDACAL--G-PKDMDS-FGLSL-V 295 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDAaq~--~-~~~m~~-ldls~-~ 295 (603)
++.++|++.+.. +++++.++.-+|.||..++.+. +..|+++|+++++|-+-. . .....+ ..+.. .
T Consensus 150 ~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 223 (384)
T PRK06348 150 INVKKLEALITS------KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMP 223 (384)
T ss_pred CCHHHHHHhhCc------CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCc
Confidence 889999988853 4677878888999999999753 346789999999998622 1 110011 11111 1
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEeCCCC
Q 007454 296 RPDFLICSFYQIFGENPSGFGCLFVKKSTV 325 (603)
Q Consensus 296 ~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~ 325 (603)
.-.+++-|+=|.||.+---+|+++..+.+.
T Consensus 224 ~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~ 253 (384)
T PRK06348 224 ERTITFGSFSKDFAMTGWRIGYVIAPDYII 253 (384)
T ss_pred CcEEEEecchhccCCccccceeeecCHHHH
Confidence 234777899999985312278888765543
No 224
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=98.81 E-value=6.1e-07 Score=100.55 Aligned_cols=150 Identities=15% Similarity=0.191 Sum_probs=95.1
Q ss_pred HHHHHHHHHHcC--------CCCCcEEEeccCc-hHHH---------------------HHHHHH-HcCCEEEEEeccC-
Q 007454 173 SAMKKRIMDFLN--------ISENDYVYDYESE-AVEA---------------------MIRTSE-KRGARVMSAEFSW- 220 (603)
Q Consensus 173 ~~aR~~Ia~~ln--------a~~~e~vf~~es~-sV~~---------------------~~~~a~-~~Ga~V~~~~~~~- 220 (603)
.+.|+.||++++ ++|++++.+..+. ++.. ....++ +.|+++..++++.
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~ 176 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSS 176 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCC
Confidence 368888888876 7889997764332 1111 112233 5799999999853
Q ss_pred CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEeccccC----CCCCCC---
Q 007454 221 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACALG----PKDMDS--- 289 (603)
Q Consensus 221 ~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq~~----~~~m~~--- 289 (603)
.+..++.+.|++.+....+...+++++.++.-+|.||.++|.+.+ ..|+++++++++|-+-.. +....+
T Consensus 177 ~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~ 256 (496)
T PLN02376 177 DNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAE 256 (496)
T ss_pred ccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHH
Confidence 235788898887654211112367888888999999999998643 457899999999975321 211111
Q ss_pred C----CCCCCCCcE--EEEcccccCCCCCCceEEEEEeC
Q 007454 290 F----GLSLVRPDF--LICSFYQIFGENPSGFGCLFVKK 322 (603)
Q Consensus 290 l----dls~~~~Df--lv~S~hK~fG~~P~G~G~L~vkk 322 (603)
+ |.....+|. ++.|+-|.||.|---+|+++..+
T Consensus 257 l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~ 295 (496)
T PLN02376 257 VVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFN 295 (496)
T ss_pred hhccccccccCCCeEEEEEeccccCCCCcceEEEEEECC
Confidence 1 111112343 46799999985323389998753
No 225
>PRK09148 aminotransferase; Validated
Probab=98.79 E-value=6.6e-07 Score=97.57 Aligned_cols=148 Identities=14% Similarity=0.058 Sum_probs=90.2
Q ss_pred HHHHHHHHHc----C--CCCC-cEEEeccCc-hHHHH---------------------HHHHHHcCCEEEEEeccCCccc
Q 007454 174 AMKKRIMDFL----N--ISEN-DYVYDYESE-AVEAM---------------------IRTSEKRGARVMSAEFSWPRLR 224 (603)
Q Consensus 174 ~aR~~Ia~~l----n--a~~~-e~vf~~es~-sV~~~---------------------~~~a~~~Ga~V~~~~~~~~~g~ 224 (603)
+.|+.|++++ | ++++ +++.+..++ ++..+ ...++..|+++..++.+. ++.
T Consensus 72 ~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~-~~~ 150 (405)
T PRK09148 72 GLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEP-DEE 150 (405)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCC-CCC
Confidence 6777888776 4 5676 787654332 21111 223455688888887752 221
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEeccccC----CCCCCCC-CCCC-
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG----PKDMDSF-GLSL- 294 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq~~----~~~m~~l-dls~- 294 (603)
..+++++.+... .++++++.+..-+|.||..+|.+ ++.+|+++|++|++|-+-.. +....++ .+..
T Consensus 151 -~~~~l~~~~~~~---~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~ 226 (405)
T PRK09148 151 -FFPALERAVRHS---IPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGA 226 (405)
T ss_pred -CccCHHHHHhhc---cccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCc
Confidence 234555555421 13678888888899999999985 33468999999999986321 1100011 1111
Q ss_pred CCCcEEEEcccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 295 VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 295 ~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
.+..+++-||-|.||. .| +|+++..+++++.+
T Consensus 227 ~~~~i~~~SfSK~~~~--pGlR~G~~v~~~~~i~~l 260 (405)
T PRK09148 227 KDVTVEFTSMSKTFSM--AGWRMGFAVGNERLIAAL 260 (405)
T ss_pred cCcEEEEeccccccCC--cchheeeeeCCHHHHHHH
Confidence 1234568999999994 37 89998766554433
No 226
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=98.79 E-value=1.4e-06 Score=93.79 Aligned_cols=300 Identities=14% Similarity=0.049 Sum_probs=156.0
Q ss_pred HHHHcCCCC-CcEEEeccCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCcccccc
Q 007454 179 IMDFLNISE-NDYVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTG 257 (603)
Q Consensus 179 Ia~~lna~~-~e~vf~~es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG 257 (603)
.+..+|+.+ ++++...-+ -.+........|+++++++++..++.+|.++|+++|.. +|+.+.+.|. -|
T Consensus 56 al~~l~~~~gdeVi~p~~t--~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~------~t~ai~~~h~---~G 124 (363)
T PF01041_consen 56 ALRALGLGPGDEVIVPAYT--FPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITP------KTKAILVVHL---FG 124 (363)
T ss_dssp HHHHTTGGTTSEEEEESSS---THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHT------TEEEEEEE-G---GG
T ss_pred HHHhcCCCcCceEecCCCc--chHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhcc------CccEEEEecC---CC
Confidence 344577765 344433211 11223445567999999999977899999999999985 6888888775 79
Q ss_pred ccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccc--ccCCCCCCceEEEEEeCCCC-cCcCCCCC
Q 007454 258 ARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFY--QIFGENPSGFGCLFVKKSTV-PILVDNTS 333 (603)
Q Consensus 258 ~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~h--K~fG~~P~G~G~L~vkk~~~-~~L~p~~~ 333 (603)
...+++.+ ++|+++|+.|+-||||..|.....--+-.+ -|+.+|||| |++.. . .-|+++.+++.+ +.++ .+.
T Consensus 125 ~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~-gd~~~fSf~~~K~i~~-g-eGG~v~~~~~~~~~~~~-~~~ 200 (363)
T PF01041_consen 125 NPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSF-GDIAIFSFHPTKIITT-G-EGGAVVTNDPELAERAR-ALR 200 (363)
T ss_dssp B---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSS-SSEEEEESSTTSSS-S-S-S-EEEEESTHHHHHHHH-HHT
T ss_pred CcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCC-CCceEecCCCCCCCcC-C-CCeeEEecHHHHHHHhh-hhh
Confidence 99999966 589999999999999998752001111223 399999998 77642 1 247777766432 2222 111
Q ss_pred C-CceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccC
Q 007454 334 S-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNAN 412 (603)
Q Consensus 334 g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 412 (603)
. |... .....+ ..... +|+. -.-.++++.
T Consensus 201 ~~g~~~--~~~~~~-----------------------~~~~~-----~g~n------~rm~~~~AA-------------- 230 (363)
T PF01041_consen 201 NHGRSR--DAFRRY-----------------------RHELP-----PGYN------FRMSELQAA-------------- 230 (363)
T ss_dssp BTTEET--SECSTT-----------------------EESSS-----S--B-------B-BHHHHH--------------
T ss_pred ccCcCc--cccccc-----------------------ccccc-----CCcc------cccHHHHHH--------------
Confidence 1 2210 000000 00000 1110 001111111
Q ss_pred CCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCC--CCCEEEEEEccCCC
Q 007454 413 TNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFD--RGPALAFNVFDWKR 490 (603)
Q Consensus 413 ~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~--rg~ivsFnv~~~~g 490 (603)
.++..+++ ++.+.++-+.+.+++.+.|..++. +.......... ....+.+.+++...
T Consensus 231 -----------igl~QL~~--L~~~~~~R~~~a~~y~~~L~~~~~--------~~~~~~~~~~~~~~~~~f~i~~~~~~~ 289 (363)
T PF01041_consen 231 -----------IGLAQLKR--LDEIIARRRENAQRYREALAGIPG--------IKPPPIPDGAERSSYYRFPIRLPDEAL 289 (363)
T ss_dssp -----------HHHHHHHT--HHHHHHHHHHHHHHHHHHHTTGTT--------EEEEGCGTTTEEBCESSEEEEETCCGC
T ss_pred -----------HHHHHHHH--hhhhHHHHHHHHHHHHHHHhcCCC--------ccccccccccccccccccccccccccc
Confidence 23434443 566667778889999999987642 43333221111 23345555655332
Q ss_pred CccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHH
Q 007454 491 EKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDV 570 (603)
Q Consensus 491 ~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDV 570 (603)
...+.+.+.+.++||.++... +.+....+. +............+. .......+.+-++..-|.+||
T Consensus 290 --~~rd~l~~~L~~~GI~~~~~~-~~pl~~~~~-------~~~~~~~~~~~~P~a----e~l~~r~l~LP~~~~lt~edv 355 (363)
T PF01041_consen 290 --ADRDELVEALRARGIETRPHY-PKPLHRQPV-------YRSYPYYAPGDLPNA----ERLSQRLLSLPIHPRLTEEDV 355 (363)
T ss_dssp --STHHHHHHHHHHTTBEEBCST-SSCGGGSGG-------GTTGEEEETSSSHHH----HHHHHHEEEEEHSTTSCHHHH
T ss_pred --chHHHHHHHHHHCCCcccccc-cCchhhhHH-------HHhcCccccCCCHHH----HHHHhCeEECcCCCCCCHHHH
Confidence 345556666677899998765 111100000 000000000000000 011124899999999999999
Q ss_pred HHHHHHHH
Q 007454 571 YRLWAFVA 578 (603)
Q Consensus 571 d~l~~~l~ 578 (603)
+++++.|+
T Consensus 356 ~~I~~~ir 363 (363)
T PF01041_consen 356 DYIAEAIR 363 (363)
T ss_dssp HHHHHHHH
T ss_pred HHHhhccC
Confidence 99999875
No 227
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.78 E-value=2.2e-06 Score=97.59 Aligned_cols=124 Identities=13% Similarity=0.105 Sum_probs=89.9
Q ss_pred HHHHHHHHHHcCC---EEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HH---HhC
Q 007454 199 VEAMIRTSEKRGA---RVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IA---QEN 271 (603)
Q Consensus 199 V~~~~~~a~~~Ga---~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a---~e~ 271 (603)
+-.+.+++.--|. .|+.+|++ .+++++.++|++.|......+..+-.|+-++-+-.+|.+=|++.|. ++ +++
T Consensus 232 HyS~~KAa~ilGlG~~~vv~VpvD-~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~ 310 (608)
T TIGR03811 232 HYSWLKAADIIGIGLDQVIPVPVD-SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKE 310 (608)
T ss_pred cHHHHHHHHHcCCCcccEEEeecC-CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHc
Confidence 4445566665676 58899998 5899999999999975322233456677788889999999999764 55 567
Q ss_pred Cc--EEEEeccccCCC-CC--------CCCC------------------CC---------CCCCcEEEEcccccCCCCCC
Q 007454 272 DW--HILIDACALGPK-DM--------DSFG------------------LS---------LVRPDFLICSFYQIFGENPS 313 (603)
Q Consensus 272 g~--~vlvDAaq~~~~-~m--------~~ld------------------ls---------~~~~Dflv~S~hK~fG~~P~ 313 (603)
|. ++|||||-.+.- .| .|.+ ++ .-++|-|++.+|||+.- |.
T Consensus 311 gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~-Py 389 (608)
T TIGR03811 311 GIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYI-PY 389 (608)
T ss_pred CCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCccccccc-CC
Confidence 85 799999744411 00 0110 11 13799999999999876 99
Q ss_pred ceEEEEEeCCC
Q 007454 314 GFGCLFVKKST 324 (603)
Q Consensus 314 G~G~L~vkk~~ 324 (603)
+.|+|++|+..
T Consensus 390 ~~G~ll~Rd~~ 400 (608)
T TIGR03811 390 SAGGIVIQDIR 400 (608)
T ss_pred CeEEEEEeCHH
Confidence 99999999864
No 228
>PRK06290 aspartate aminotransferase; Provisional
Probab=98.78 E-value=1.1e-06 Score=96.22 Aligned_cols=145 Identities=15% Similarity=0.144 Sum_probs=96.2
Q ss_pred HHHHHHHHHHc----C---CCCC-cEEEeccCc-hHH---------------------HHHHHHHHcCCEEEEEeccCC-
Q 007454 173 SAMKKRIMDFL----N---ISEN-DYVYDYESE-AVE---------------------AMIRTSEKRGARVMSAEFSWP- 221 (603)
Q Consensus 173 ~~aR~~Ia~~l----n---a~~~-e~vf~~es~-sV~---------------------~~~~~a~~~Ga~V~~~~~~~~- 221 (603)
...|+.|++++ | ++++ +++.+..++ ++. .....++..|+++..++.+..
T Consensus 84 ~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~ 163 (410)
T PRK06290 84 QEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEEN 163 (410)
T ss_pred HHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCc
Confidence 36777777775 4 5665 686654322 111 123446677999999988632
Q ss_pred ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEeccccC----CCCCCC-CCC
Q 007454 222 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACALG----PKDMDS-FGL 292 (603)
Q Consensus 222 ~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq~~----~~~m~~-ldl 292 (603)
...++.++|++.+.. +++++.+..-+|.||.++|.+ ++.+|+++|.+|++|-+-.- +.. .+ +.+
T Consensus 164 ~~~~d~~~l~~~~~~------~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~-~s~~~~ 236 (410)
T PRK06290 164 NFLPDLDSIPKDIKE------KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP-LSFLSV 236 (410)
T ss_pred CCcCCHHHHHHhhcc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCC-cChhcC
Confidence 345688888888753 577888777799999999975 33568999999999986321 110 01 112
Q ss_pred CC-CCCcEEEEcccccCCCCCCc--eEEEEEeCCCCc
Q 007454 293 SL-VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVP 326 (603)
Q Consensus 293 s~-~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~ 326 (603)
.. .+.++++-|+=|.||. .| +|.++..+++++
T Consensus 237 ~~~~~~~I~i~SfSK~~g~--~GlRiG~ii~~~~l~~ 271 (410)
T PRK06290 237 PGAKEVGVEIHSLSKAYNM--TGWRLAFVVGNELIVK 271 (410)
T ss_pred CCccccEEEEeechhhcCC--chhheEeEEeCHHHHH
Confidence 11 2457999999999984 37 798887665543
No 229
>PRK06434 cystathionine gamma-lyase; Validated
Probab=98.77 E-value=9.6e-07 Score=95.80 Aligned_cols=100 Identities=15% Similarity=0.101 Sum_probs=70.2
Q ss_pred HHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccc
Q 007454 203 IRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACA 281 (603)
Q Consensus 203 ~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq 281 (603)
...+.+.|+++.+++++.. ..+ . +.. .+++||.+-+.+|.|+...|++.| ++||++| ++||+++
T Consensus 121 ~~~~~~~Gi~v~fvd~~~~-~~~-----~--l~~-----~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~ 185 (384)
T PRK06434 121 NKVLKTLGIHVDYIDTDRL-NSL-----D--FDP-----SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATF 185 (384)
T ss_pred HHHHHhcCcEEEEECCCCh-hhe-----e--ecC-----CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCC
Confidence 3455567777777776521 111 1 221 268999999999999999999955 5899988 5679998
Q ss_pred cCCCCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEe
Q 007454 282 LGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVK 321 (603)
Q Consensus 282 ~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~L~vk 321 (603)
..|....|++ +++|++++|.||++++ +.+ -|++..+
T Consensus 186 ~s~~~~~pl~---~gaDivv~S~tK~i~G-~~d~~gG~vv~~ 223 (384)
T PRK06434 186 ASPYNQNPLD---LGADVVIHSATKYISG-HSDVVMGVAGTN 223 (384)
T ss_pred CCcccCCchh---cCCCEEEeecccccCC-CCCceEEEEecC
Confidence 7665223554 6899999999999986 554 3444443
No 230
>PLN02656 tyrosine transaminase
Probab=98.74 E-value=9.7e-07 Score=96.40 Aligned_cols=143 Identities=12% Similarity=0.133 Sum_probs=92.4
Q ss_pred HHHHHHHHHHcC------CCCCcEEEeccCc-hHHHH---------------------HHHHHHcCCEEEEEeccCC-cc
Q 007454 173 SAMKKRIMDFLN------ISENDYVYDYESE-AVEAM---------------------IRTSEKRGARVMSAEFSWP-RL 223 (603)
Q Consensus 173 ~~aR~~Ia~~ln------a~~~e~vf~~es~-sV~~~---------------------~~~a~~~Ga~V~~~~~~~~-~g 223 (603)
.+.|+.|+++++ +++++++++..+. ++..+ ...++..|+++..++++.. +.
T Consensus 76 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~ 155 (409)
T PLN02656 76 PQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGW 155 (409)
T ss_pred HHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCC
Confidence 367888888874 5678887654321 22111 1223446888888887422 34
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEecccc----CCCCCCCC-CCCC
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL----GPKDMDSF-GLSL 294 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq~----~~~~m~~l-dls~ 294 (603)
.++.++|++++.. +++++++..-+|.||.++|.+ +++.|+++|+++++|.+-. -+....++ .+..
T Consensus 156 ~~d~~~l~~~~~~------~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 229 (409)
T PLN02656 156 EVDLDAVEALADQ------NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGS 229 (409)
T ss_pred CCCHHHHHHHhcc------CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcc
Confidence 6899999888753 578888888999999999764 3356899999999999732 12110111 1111
Q ss_pred CCCcEEEEcccccCCCCCCceEEEEEe
Q 007454 295 VRPDFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 295 ~~~Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
...=+++.||=|.|+.+---+|+++..
T Consensus 230 ~~~vi~~~SfSK~f~~pGlRiG~~i~~ 256 (409)
T PLN02656 230 IVPVLTLGSLSKRWIVPGWRLGWFVTT 256 (409)
T ss_pred cCcEEEEcccchhccCcceeEEEEEEe
Confidence 122367889999988532238888874
No 231
>PLN02187 rooty/superroot1
Probab=98.74 E-value=2e-06 Score=95.64 Aligned_cols=141 Identities=11% Similarity=0.134 Sum_probs=93.6
Q ss_pred HHHHHHHHHHcC------CCCCcEEEeccCc-hHHH---------------------HHHHHHHcCCEEEEEeccC-Ccc
Q 007454 173 SAMKKRIMDFLN------ISENDYVYDYESE-AVEA---------------------MIRTSEKRGARVMSAEFSW-PRL 223 (603)
Q Consensus 173 ~~aR~~Ia~~ln------a~~~e~vf~~es~-sV~~---------------------~~~~a~~~Ga~V~~~~~~~-~~g 223 (603)
...|+.||++++ +++++++++..+. ++.. ....++..|++++.+++.. .+.
T Consensus 111 ~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~ 190 (462)
T PLN02187 111 LPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEW 190 (462)
T ss_pred HHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCC
Confidence 468899999884 6888987764332 2211 1234566788888887631 245
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEeccc----cCCCCCCCCCCCCC
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDACA----LGPKDMDSFGLSLV 295 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDAaq----~~~~~m~~ldls~~ 295 (603)
.++.++|++++.. +++++.+..-+|.||.+++.+. +..|+++|++|++|-+- +.+.. ...+..+
T Consensus 191 ~~d~~~l~~~~~~------~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~--~~s~~~~ 262 (462)
T PLN02187 191 EIDLEGIEAIADE------NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNP--FVSMGKF 262 (462)
T ss_pred ccCHHHHHHhcCC------CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC--ceeHHHh
Confidence 7889999887753 5788888888999999999653 34678999999999862 11210 1122222
Q ss_pred C---CcEEEEcccccCCCCCCceEEEEEe
Q 007454 296 R---PDFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 296 ~---~Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
. .=+++.|+=|.||.+---+|.+++.
T Consensus 263 ~~~~~vi~l~SfSK~f~~pGlRiG~~v~~ 291 (462)
T PLN02187 263 ASIVPVLTLAGISKGWVVPGWKIGWIALN 291 (462)
T ss_pred ccCCcEEEEecchhhcCCccceeEEEEec
Confidence 1 2366779999998531227888873
No 232
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=98.73 E-value=3e-06 Score=91.41 Aligned_cols=153 Identities=12% Similarity=0.136 Sum_probs=96.9
Q ss_pred HHHHHHHHHHcC--------CCCCcEEEeccCc-hH----------------------HHHHHHHHHcCCEEEEEeccCC
Q 007454 173 SAMKKRIMDFLN--------ISENDYVYDYESE-AV----------------------EAMIRTSEKRGARVMSAEFSWP 221 (603)
Q Consensus 173 ~~aR~~Ia~~ln--------a~~~e~vf~~es~-sV----------------------~~~~~~a~~~Ga~V~~~~~~~~ 221 (603)
.+.|+.|+++++ +++++++.+..+. ++ ......++..|+++..++.+..
T Consensus 69 ~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~ 148 (374)
T PRK02610 69 EALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPE 148 (374)
T ss_pred HHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcc
Confidence 478899999988 7888887665432 11 1122345667888888887532
Q ss_pred ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHHHHH--hCCcEEEEeccc--cCCCCCCCCCCCCCCC
Q 007454 222 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQ--ENDWHILIDACA--LGPKDMDSFGLSLVRP 297 (603)
Q Consensus 222 ~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~~a~--e~g~~vlvDAaq--~~~~~m~~ldls~~~~ 297 (603)
+..++.++|++.+... ...+++++.+..-+|.||..++.+.+..+. .+++++++|-+- +....+ .-.+....-
T Consensus 149 ~~~~d~~~l~~~~~~~--~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~-~~~~~~~~~ 225 (374)
T PRK02610 149 TFEIDLAAAQSAIEQT--QNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTL-VGELAQHPN 225 (374)
T ss_pred cCCCCHHHHHHHHHhh--cCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccch-HHHHhcCCC
Confidence 3578999999988630 012578888777899999999998664322 248999999763 222210 011222111
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCCcCc
Q 007454 298 DFLICSFYQIFGENPSGFGCLFVKKSTVPIL 328 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L 328 (603)
=+++-||=|.||.+---+|.++..+++++.+
T Consensus 226 ~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l 256 (374)
T PRK02610 226 WVILRTFSKAFRLAAHRVGYAIGHPELIAVL 256 (374)
T ss_pred EEEEEecchhccCcccceeeeecCHHHHHHH
Confidence 2677899999985322278887665554433
No 233
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=98.72 E-value=2e-06 Score=91.90 Aligned_cols=146 Identities=11% Similarity=0.160 Sum_probs=91.5
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCc-hHHHHHH---------------------HHHHcCCEEEEEeccCC-ccccCHHH
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESE-AVEAMIR---------------------TSEKRGARVMSAEFSWP-RLRINSEK 229 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~-sV~~~~~---------------------~a~~~Ga~V~~~~~~~~-~g~i~~~~ 229 (603)
...|+.|++++++++++++.+..+. ++..+.. .++..|+++..++++.. +..++.++
T Consensus 68 ~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~ 147 (357)
T PRK14809 68 ADLTAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADT 147 (357)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHH
Confidence 4799999999999999997765332 2222211 23446777877776421 23456666
Q ss_pred HHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHh--CCcEEEEecccc--CCCCCCCCC-CCCCCCcEEEEc
Q 007454 230 LRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQE--NDWHILIDACAL--GPKDMDSFG-LSLVRPDFLICS 303 (603)
Q Consensus 230 L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e--~g~~vlvDAaq~--~~~~m~~ld-ls~~~~Dflv~S 303 (603)
+.+.+. +++++.++.-+|.||..+|.+.+ ++++. .+.++++|-+-. .... ..+. +....-=+++.|
T Consensus 148 ~~~~~~-------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~-~~~~~~~~~~~vi~~~S 219 (357)
T PRK14809 148 VLDAYD-------GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERP-SAVALVEERDDVAVLRT 219 (357)
T ss_pred HHHhhc-------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCc-hhHHHHhhCCCEEEEec
Confidence 655442 46788888999999999999744 45443 377899997632 2110 0111 111111266789
Q ss_pred ccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 304 FYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 304 ~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
|=|.|| ..| +|.++..++.++.+
T Consensus 220 fSK~~~--~~GlRiG~~~~~~~~~~~~ 244 (357)
T PRK14809 220 FSKAYG--LAGLRLGYAVVPEEWADAY 244 (357)
T ss_pred chhHhc--CcchhheeeecCHHHHHHH
Confidence 999999 347 78888776654433
No 234
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=98.72 E-value=6.4e-06 Score=90.66 Aligned_cols=120 Identities=13% Similarity=0.064 Sum_probs=81.0
Q ss_pred HHHcCCEEEEEeccCC---------ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccc-cccccHHHH----HHHHhC
Q 007454 206 SEKRGARVMSAEFSWP---------RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARYPYLWM----RIAQEN 271 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~---------~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~T-G~~~pl~~i----~~a~e~ 271 (603)
....|++++.++++.. .+.+|.++|++.|.++ ..++++++++..-+|.+ |..++.+.+ ++|+++
T Consensus 108 i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~--~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~ 185 (431)
T cd00617 108 IEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV--GAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKY 185 (431)
T ss_pred HHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcc--cCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHc
Confidence 3456888888887521 3569999999999742 12358899999999988 899987643 478999
Q ss_pred CcEEEEeccccCCCC---------CCCCCCCC------CCCcEEEEcccccCCCCCCceEEEEEeCC-CCcCcC
Q 007454 272 DWHILIDACALGPKD---------MDSFGLSL------VRPDFLICSFYQIFGENPSGFGCLFVKKS-TVPILV 329 (603)
Q Consensus 272 g~~vlvDAaq~~~~~---------m~~ldls~------~~~Dflv~S~hK~fG~~P~G~G~L~vkk~-~~~~L~ 329 (603)
|++|+.|++++...- -....+.+ ...|.+++|+||-++. |. -|++..+++ +...++
T Consensus 186 gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~-~~-GG~i~~~d~~l~~~~~ 257 (431)
T cd00617 186 GIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLV-NI-GGFLALRDDELYEEAR 257 (431)
T ss_pred CCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCC-cc-ceEEEeCcHHHHHHHH
Confidence 999999999764210 00111111 1489999999997765 43 235666653 544443
No 235
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=98.71 E-value=1.7e-06 Score=93.58 Aligned_cols=146 Identities=10% Similarity=0.084 Sum_probs=90.7
Q ss_pred HHHHHHHHHc----C--CCCC-cEEEeccCc-hHHH---------------------HHHHHHHcCCEEEEEeccCCc-c
Q 007454 174 AMKKRIMDFL----N--ISEN-DYVYDYESE-AVEA---------------------MIRTSEKRGARVMSAEFSWPR-L 223 (603)
Q Consensus 174 ~aR~~Ia~~l----n--a~~~-e~vf~~es~-sV~~---------------------~~~~a~~~Ga~V~~~~~~~~~-g 223 (603)
+.|+.|++++ | ++++ +++.+..+. ++.. ....++..|+++..++++..+ .
T Consensus 72 ~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 151 (388)
T PRK07366 72 DFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDF 151 (388)
T ss_pred HHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCC
Confidence 6788888877 3 6777 576654332 2111 123456679999998886322 3
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEeccc--c--CCCC-CCC-CCCC
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACA--L--GPKD-MDS-FGLS 293 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq--~--~~~~-m~~-ldls 293 (603)
.++.+++++.+.. +++++.++.-+|.||..++.+.+ ..|+++|+++++|-+- + .+.. +.+ +++.
T Consensus 152 ~~d~~~l~~~~~~------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~ 225 (388)
T PRK07366 152 LPVFADIPTEVLA------QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQAD 225 (388)
T ss_pred CCCHHHHHHhhcc------cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCC
Confidence 4677787776642 47888888889999999999743 3578999999999641 1 1210 001 1121
Q ss_pred CCC-CcEEEEcccccCCCCCCceEEEEEeCCCC
Q 007454 294 LVR-PDFLICSFYQIFGENPSGFGCLFVKKSTV 325 (603)
Q Consensus 294 ~~~-~Dflv~S~hK~fG~~P~G~G~L~vkk~~~ 325 (603)
..+ .-+++.||=|.||.+---+|.++..++++
T Consensus 226 ~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li 258 (388)
T PRK07366 226 PEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLI 258 (388)
T ss_pred CCcccEEEEeecccccCCcchhheehcCCHHHH
Confidence 111 22567899999985322367777555544
No 236
>PRK08068 transaminase; Reviewed
Probab=98.71 E-value=1.5e-06 Score=93.98 Aligned_cols=147 Identities=12% Similarity=0.152 Sum_probs=94.9
Q ss_pred HHHHHHHHHc----C--CCCC-cEEEeccCc-hHH---------------------HHHHHHHHcCCEEEEEeccCC-cc
Q 007454 174 AMKKRIMDFL----N--ISEN-DYVYDYESE-AVE---------------------AMIRTSEKRGARVMSAEFSWP-RL 223 (603)
Q Consensus 174 ~aR~~Ia~~l----n--a~~~-e~vf~~es~-sV~---------------------~~~~~a~~~Ga~V~~~~~~~~-~g 223 (603)
+.|++|++++ | ++++ +++.+..+. ++. .....++..|+++..++.+.. +.
T Consensus 74 ~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~ 153 (389)
T PRK08068 74 FLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNF 153 (389)
T ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCC
Confidence 6778888876 4 5677 676543321 111 112345667899998888632 34
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEeccc--cC--CCCCCC-CCCC-
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACA--LG--PKDMDS-FGLS- 293 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq--~~--~~~m~~-ldls- 293 (603)
.++.++|++.+.. +++++.+..-+|.||..+|.+.+ ++|++++.++++|-+- +. +....+ +.+.
T Consensus 154 ~~d~~~l~~~~~~------~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~ 227 (389)
T PRK08068 154 LPDYTKIPEEVAE------KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPG 227 (389)
T ss_pred CCCHHHHHHhccc------cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCC
Confidence 5788889888753 46777777678999999999633 4578999999999863 11 110001 1111
Q ss_pred CCCCcEEEEcccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 294 LVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 294 ~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
.....+++.|+=|.||. .| +|.++..+++++.+
T Consensus 228 ~~~~~i~~~S~SK~~g~--~GlRiG~~~~~~~l~~~l 262 (389)
T PRK08068 228 AKDVGIELYTLSKTFNM--AGWRVAFAVGNESVIEAI 262 (389)
T ss_pred ccCCEEEEecchhccCC--ccceeEeEecCHHHHHHH
Confidence 11234788899999994 37 89888766554433
No 237
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=98.70 E-value=1.3e-05 Score=87.23 Aligned_cols=218 Identities=12% Similarity=0.096 Sum_probs=127.2
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccc-cH---HHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY-PY---LWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~-pl---~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
+.++|++.|.. ++++|.+--..+..|.+. |. +.+ ++|+++|+++++|=++.+ |.. |.....-...|
T Consensus 168 d~~~l~~~l~~------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~p 241 (397)
T TIGR03246 168 DLAAAKALISD------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTP 241 (397)
T ss_pred CHHHHHHHhcc------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCC
Confidence 67888888852 577777777777888765 43 433 368999999999988632 110 11111112368
Q ss_pred cEEEEcccccCCCCCCc--eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCC
Q 007454 298 DFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 375 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n 375 (603)
|.++ +=|-+|+ | +|++..++++++.+.....+++ + + .|
T Consensus 242 Di~t--~~K~lgg---G~pigav~~~~~i~~~~~~~~~~~t--------------------------------~--~-~~ 281 (397)
T TIGR03246 242 DILT--SAKALGG---GFPIGAMLTTTEIAAHLKVGTHGTT--------------------------------Y--G-GN 281 (397)
T ss_pred CEEE--eehhhhC---CcceeEEEEcHHHHHhccCCCcCCC--------------------------------C--C-CC
Confidence 9875 4676641 3 7888888877655542110000 0 1 11
Q ss_pred hhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC
Q 007454 376 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 455 (603)
Q Consensus 376 ~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L 455 (603)
..+.++. + ++|+.++. +.+.++.+.+.++|.++|.++
T Consensus 282 p~~~aaa---------------~-------------------------a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l 318 (397)
T TIGR03246 282 PLACAVA---------------G-------------------------KVLDLVNT---PELLAGVKQRHDLFVDGLEKI 318 (397)
T ss_pred HHHHHHH---------------H-------------------------HHHHHHhh---ccHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1 46665543 456778888999999999876
Q ss_pred CCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhh
Q 007454 456 QHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTD 535 (603)
Q Consensus 456 ~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~ 535 (603)
... .+++ +.- ...|.++.+.+.+...+ . ...+.+.+.++||.+...
T Consensus 319 ~~~----~~~~---~~v--rg~G~~~~i~~~~~~~~-~-~~~~~~~l~~~Gv~~~~~----------------------- 364 (397)
T TIGR03246 319 NAR----YNVF---SEI--RGKGLLIGAVLTEAYQG-K-AKQFVNAAAEEGVIALIA----------------------- 364 (397)
T ss_pred Hhc----CCCe---Eee--ecCceEEEEEEcCchhh-H-HHHHHHHHHHCCeEEeec-----------------------
Confidence 421 1222 110 12456666665431111 1 122333334467765320
Q ss_pred cccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 536 REAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+.+++|+++.+..|.+||+++++.|.++++.
T Consensus 365 -----------------g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 365 -----------------GPNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred -----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 1258999999999999999999999988864
No 238
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.70 E-value=4e-06 Score=88.12 Aligned_cols=109 Identities=12% Similarity=0.096 Sum_probs=89.5
Q ss_pred HHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEecc
Q 007454 202 MIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDAC 280 (603)
Q Consensus 202 ~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAa 280 (603)
....+++.|.+|++++.+ +++.+++.|++ +|++|-+-...|.-+.+.|++.|+ +||++|+.++||-+
T Consensus 118 f~~tl~~~Gi~v~fvd~~------d~~~~~~aI~~------nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT 185 (426)
T COG2873 118 FSHTLKRLGIEVRFVDPD------DPENFEAAIDE------NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNT 185 (426)
T ss_pred HHHHHHhcCcEEEEeCCC------CHHHHHHHhCc------ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecC
Confidence 344568899999999764 47899999985 799999999999999999999775 89999999999987
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCC
Q 007454 281 ALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTV 325 (603)
Q Consensus 281 q~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~ 325 (603)
=..|--+.|+ ++++|.|+-|.-||.|+.-+.+|..+|.....
T Consensus 186 ~atpyl~rP~---~hGADIVvHS~TK~igGhGt~iGG~iVD~G~F 227 (426)
T COG2873 186 FATPYLCRPI---EHGADIVVHSATKYIGGHGTAIGGVIVDGGKF 227 (426)
T ss_pred CCcceecchh---hcCCCEEEEeecccccCCccccceEEEeCCcc
Confidence 5555422355 47899999999999886677789888876654
No 239
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=98.69 E-value=4.1e-06 Score=92.07 Aligned_cols=142 Identities=13% Similarity=0.103 Sum_probs=91.7
Q ss_pred HHHHHHHHHHcC--CC-CCcEEEeccCc----------------------hHHHHHHHHHHcCCEEEEEeccCCccccCH
Q 007454 173 SAMKKRIMDFLN--IS-ENDYVYDYESE----------------------AVEAMIRTSEKRGARVMSAEFSWPRLRINS 227 (603)
Q Consensus 173 ~~aR~~Ia~~ln--a~-~~e~vf~~es~----------------------sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~ 227 (603)
.+.|+.|+++++ .. +++++.+..+. +-......++..|+++..++++ .++ ++.
T Consensus 124 ~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~~g-~~~ 201 (431)
T PRK15481 124 PELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVD-AEG-MQP 201 (431)
T ss_pred HHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccC-CCC-CCH
Confidence 357788888876 33 45776654322 1122234556789999999886 343 889
Q ss_pred HHHHHHHhhcCCCCCCeeEEEE-eCccccccccccHH----HHHHHHhC-CcEEEEeccc--cC--CCCCCCCCCCCCCC
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVF-PLHSRMTGARYPYL----WMRIAQEN-DWHILIDACA--LG--PKDMDSFGLSLVRP 297 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~-~~~Sn~TG~~~pl~----~i~~a~e~-g~~vlvDAaq--~~--~~~m~~ldls~~~~ 297 (603)
++|++++.. +++++.+ |.-+|.||..++.+ ++.+|+++ +++|+.|-+- +. +.. ..+.. ...-
T Consensus 202 ~~l~~~~~~------~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~-~~~~~-~~~~ 273 (431)
T PRK15481 202 EKLERALAQ------GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYH-SVIPQ-TTQR 273 (431)
T ss_pred HHHHHHHhc------CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCC-CCCcC-CCCC
Confidence 999998863 3555554 68999999999995 33467888 9999999642 11 210 11221 1123
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCC
Q 007454 298 DFLICSFYQIFGENPSGFGCLFVKKSTV 325 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G~G~L~vkk~~~ 325 (603)
-+++-||-|.|| +---+|.++..+...
T Consensus 274 vi~~~SfSK~~~-~GlRiG~~i~~~~~~ 300 (431)
T PRK15481 274 WALIRSVSKALG-PDLRLAFVASDSATS 300 (431)
T ss_pred EEEEeeeccccC-CCceeEEEeCCHHHH
Confidence 488899999999 423378777655443
No 240
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=98.69 E-value=2e-06 Score=95.14 Aligned_cols=149 Identities=11% Similarity=0.170 Sum_probs=93.5
Q ss_pred HHHHHHHHHHcC--------CCCCcEEEeccCch-HHHH---------------------HHHH-HHcCCEEEEEeccCC
Q 007454 173 SAMKKRIMDFLN--------ISENDYVYDYESEA-VEAM---------------------IRTS-EKRGARVMSAEFSWP 221 (603)
Q Consensus 173 ~~aR~~Ia~~ln--------a~~~e~vf~~es~s-V~~~---------------------~~~a-~~~Ga~V~~~~~~~~ 221 (603)
...|+.||++++ ++|++++.+..... +..+ .... .+.|++++.++++..
T Consensus 98 ~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~ 177 (447)
T PLN02607 98 KSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSS 177 (447)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCC
Confidence 467888888875 57778876543221 1111 1112 256888888887632
Q ss_pred c-cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEeccccC----CCCCCCC-C
Q 007454 222 R-LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDACALG----PKDMDSF-G 291 (603)
Q Consensus 222 ~-g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDAaq~~----~~~m~~l-d 291 (603)
+ ..++.++|++.+..-++.+.+++++.++.-+|.||..+|-+. +..|+++++++++|-+-.. .....++ .
T Consensus 178 ~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s 257 (447)
T PLN02607 178 NNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAE 257 (447)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHH
Confidence 2 357899999988742223346888888999999999999753 3468999999999986321 1100111 0
Q ss_pred C-CCCC----Cc--EEEEcccccCCCCCCceEEEEEe
Q 007454 292 L-SLVR----PD--FLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 292 l-s~~~----~D--flv~S~hK~fG~~P~G~G~L~vk 321 (603)
+ ...+ .+ .++-|+=|.||.+---+|+++..
T Consensus 258 ~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~ 294 (447)
T PLN02607 258 IVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSY 294 (447)
T ss_pred HHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEc
Confidence 0 0111 22 46789999998542237998873
No 241
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=98.68 E-value=2.7e-07 Score=93.94 Aligned_cols=232 Identities=14% Similarity=0.163 Sum_probs=148.5
Q ss_pred cCCEEEEEeccCCccccCHHHHHHHHhhcCCC--CCCeeEEEEeCcccccc-ccccHHHHH----HHHhCCcEEEEeccc
Q 007454 209 RGARVMSAEFSWPRLRINSEKLRKMVVSKGKK--KKQRGLFVFPLHSRMTG-ARYPYLWMR----IAQENDWHILIDACA 281 (603)
Q Consensus 209 ~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~--~~~t~Lv~~~~~Sn~TG-~~~pl~~i~----~a~e~g~~vlvDAaq 281 (603)
.|+.++.+... +++-+++++++..|+..+.. -+.|+|+++---.|.+| ..+|++|+. +|+++|..+|+|++-
T Consensus 119 ~gv~~~tv~~e-~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGAR 197 (384)
T KOG1368|consen 119 AGVHVRTVKNE-NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGAR 197 (384)
T ss_pred ccceeEeeeeC-CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhh
Confidence 47778777766 68999999999999853211 35799999987777777 999999874 578999999999864
Q ss_pred cCCCCC-CCCCCCCC--CCcEEEEcccccCCCCCCceEEEEE-eCCCCcC---cCCCCCCCceeccccccccccccccCC
Q 007454 282 LGPKDM-DSFGLSLV--RPDFLICSFYQIFGENPSGFGCLFV-KKSTVPI---LVDNTSSGMVSLLPAKKQLWLTDEFSS 354 (603)
Q Consensus 282 ~~~~~m-~~ldls~~--~~Dflv~S~hK~fG~~P~G~G~L~v-kk~~~~~---L~p~~~gG~v~~~~~~~~~~~~~~~~~ 354 (603)
.+--.. .-+.++++ -.|-+.+.+-|-+|. | +|-.+| .++++.+ ++..+.||+
T Consensus 198 i~NAavasgV~vk~i~~~fDSVsiCLSKglgA-P--VGSViVG~k~FI~kA~~~RKalGGGm------------------ 256 (384)
T KOG1368|consen 198 IFNAAVASGVPVKKICSAFDSVSICLSKGLGA-P--VGSVIVGSKDFIDKARHFRKALGGGM------------------ 256 (384)
T ss_pred hhhHHHHcCCCHHHHHHhhhhhhhhhhccCCC-C--cccEEEccHHHHHHHHHHHHHhcCch------------------
Confidence 332100 12233332 478999999999998 6 454444 5555432 222222233
Q ss_pred CCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCH
Q 007454 355 CETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGL 434 (603)
Q Consensus 355 ~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl 434 (603)
--.|+++.+ ++ -+|++... -+
T Consensus 257 --------------------RQsGvLaaa-------------aL-------------------------val~~~~~-~L 277 (384)
T KOG1368|consen 257 --------------------RQSGVLAAA-------------AL-------------------------VALDENVP-LL 277 (384)
T ss_pred --------------------hHHHHHHHH-------------HH-------------------------HHhhcchH-HH
Confidence 111222211 11 24443221 24
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcc
Q 007454 435 TMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSL 514 (603)
Q Consensus 435 ~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~ 514 (603)
..-.++.+.|++++. ++. .+++.-|. -...++..++... .+.++.+.+.++++||-+=.|
T Consensus 278 ~~dHk~A~~lAe~~~----~~~--------~i~v~v~a---~etNiv~~~l~q~---~~~~~~l~~~~~k~gi~lm~~-- 337 (384)
T KOG1368|consen 278 RADHKRAKELAEYIN----TPE--------EIRVEVPA---VETNIVNMVLCQA---RLTAEELCKFLEKNGILLMGG-- 337 (384)
T ss_pred HHHHHHHHHHHHHhc----ccc--------ceeeecch---hhcceeeeecccc---cCCHHHHHHHHHHCCeEEeec--
Confidence 455666677777665 221 14554442 3466888887443 377888888888999876433
Q ss_pred cCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Q 007454 515 HHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQ 579 (603)
Q Consensus 515 C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~ 579 (603)
...-+|++|++--|.+||+.+...+++
T Consensus 338 --------------------------------------~s~r~Rivlh~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 338 --------------------------------------ASRRIRIVLHHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred --------------------------------------cccceEEEEEEecCHHHHHHHHHHHHH
Confidence 012489999999999999999999944
No 242
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.68 E-value=3e-07 Score=92.48 Aligned_cols=152 Identities=14% Similarity=0.139 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHcCCCCCcEEE--------------------eccCchHHHHHHHHHHcCCEEEEEecc-CCccccCHHHH
Q 007454 172 ESAMKKRIMDFLNISENDYVY--------------------DYESEAVEAMIRTSEKRGARVMSAEFS-WPRLRINSEKL 230 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~vf--------------------~~es~sV~~~~~~a~~~Ga~V~~~~~~-~~~g~i~~~~L 230 (603)
+.+-.+.+++|||.+.-.+.- .-.++++-..--+|++.|.+|..+|-. .|.-+|+++..
T Consensus 63 I~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y 142 (382)
T COG1103 63 IKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGY 142 (382)
T ss_pred HHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHH
Confidence 455666689999987655510 112333333334578899999999842 46678999998
Q ss_pred HHHHhhcCCC-CCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccC
Q 007454 231 RKMVVSKGKK-KKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIF 308 (603)
Q Consensus 231 ~~~l~~~~~~-~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~f 308 (603)
...|..-+++ ...+.|..++|+...-|...|...++ +|+++|+++||.+|-.+|. .|++..+.++||++.|+||-+
T Consensus 143 ~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Gr--mpvs~ke~g~DFiVgSGHKsm 220 (382)
T COG1103 143 AEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGR--MPVSGKEIGADFIVGSGHKSM 220 (382)
T ss_pred HHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecc--ccccccccCCCEEEecCccch
Confidence 8888753333 24689999999999999999998665 8999999999999999998 699999999999999999976
Q ss_pred CCCCCceEEEEEeCCCCc
Q 007454 309 GENPSGFGCLFVKKSTVP 326 (603)
Q Consensus 309 G~~P~G~G~L~vkk~~~~ 326 (603)
.. -.=+|+|-++.+..+
T Consensus 221 AA-s~PiGvl~~~eE~ae 237 (382)
T COG1103 221 AA-SAPIGVLAMSEEWAE 237 (382)
T ss_pred hc-cCCeeEEeehhHHHH
Confidence 52 222899999988754
No 243
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.68 E-value=3.7e-06 Score=91.17 Aligned_cols=147 Identities=12% Similarity=0.045 Sum_probs=91.0
Q ss_pred HHHHHHHHHHc--------CCCCC-cEEEeccCc-hHHH-----------------------HHHHHHHcCCEEEEEecc
Q 007454 173 SAMKKRIMDFL--------NISEN-DYVYDYESE-AVEA-----------------------MIRTSEKRGARVMSAEFS 219 (603)
Q Consensus 173 ~~aR~~Ia~~l--------na~~~-e~vf~~es~-sV~~-----------------------~~~~a~~~Ga~V~~~~~~ 219 (603)
.+.|+.|++++ |++++ +++.+..++ ++.. ....++..|+++..++.+
T Consensus 67 ~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~ 146 (393)
T TIGR03538 67 PELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCT 146 (393)
T ss_pred HHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeecc
Confidence 36788888887 46675 576543321 1111 123345568888888775
Q ss_pred CC-ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEecccc--CCC-CCCCCC
Q 007454 220 WP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDACAL--GPK-DMDSFG 291 (603)
Q Consensus 220 ~~-~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDAaq~--~~~-~m~~ld 291 (603)
.. +..++.++|++.+.. +++++.++.-+|.||..++.+. ++.|++++++|++|-+-. ... ...+..
T Consensus 147 ~~~~~~~d~~~l~~~~~~------~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~ 220 (393)
T TIGR03538 147 AENGFLPDFDAVPESVWR------RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAG 220 (393)
T ss_pred ccCCCCCCHHHHHHHHhh------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcC
Confidence 22 235788899888753 5788888899999999999642 346789999999998621 110 000111
Q ss_pred ----CCCCCC-----cEEEEcccccCCCCCCceEEEEEeCCCC
Q 007454 292 ----LSLVRP-----DFLICSFYQIFGENPSGFGCLFVKKSTV 325 (603)
Q Consensus 292 ----ls~~~~-----Dflv~S~hK~fG~~P~G~G~L~vkk~~~ 325 (603)
+...+. =+++.|+-|.||.+-.-+|+++..++++
T Consensus 221 ~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~ 263 (393)
T TIGR03538 221 LLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEIL 263 (393)
T ss_pred HHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHH
Confidence 011111 2788999998874322278777655443
No 244
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.68 E-value=1.3e-05 Score=87.70 Aligned_cols=142 Identities=14% Similarity=0.157 Sum_probs=91.0
Q ss_pred HHHHHHHHHc------CCCCCcEEEeccCc-hHHHH---------------------HHHHHHcCCEEEEEeccC-Cccc
Q 007454 174 AMKKRIMDFL------NISENDYVYDYESE-AVEAM---------------------IRTSEKRGARVMSAEFSW-PRLR 224 (603)
Q Consensus 174 ~aR~~Ia~~l------na~~~e~vf~~es~-sV~~~---------------------~~~a~~~Ga~V~~~~~~~-~~g~ 224 (603)
+.|+.|++++ ++++++++++..+. ++..+ ...++..|+++..++.+. .+..
T Consensus 78 ~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 157 (409)
T PLN00143 78 PARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWE 157 (409)
T ss_pred HHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCc
Confidence 5788888887 46788887764332 22111 233455688888877631 2346
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEecccc--C--CCCCCCCC-CCCC
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACAL--G--PKDMDSFG-LSLV 295 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq~--~--~~~m~~ld-ls~~ 295 (603)
++.++|++++.. +++++++..-+|.||.+++.+.+ ..|+++++++++|-+-. . +....++. +...
T Consensus 158 ~d~~~l~~~~~~------~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~ 231 (409)
T PLN00143 158 VDLDAVEAIADE------NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASI 231 (409)
T ss_pred CCHHHHHHhccc------CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhccc
Confidence 889999887753 46777777789999999997632 45789999999998621 1 11001111 1111
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEe
Q 007454 296 RPDFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 296 ~~Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
..=+++.||=|.||.+---+|.++..
T Consensus 232 ~~vi~~~SfSK~f~~pGlRvG~~v~~ 257 (409)
T PLN00143 232 VPVITLGSISKRWMIPGWGLGWLVTC 257 (409)
T ss_pred CcEEEEccchhhcCCCccceEEEEee
Confidence 12278899999988532237888773
No 245
>PRK08636 aspartate aminotransferase; Provisional
Probab=98.67 E-value=3.6e-06 Score=91.66 Aligned_cols=148 Identities=12% Similarity=0.148 Sum_probs=88.1
Q ss_pred HHHHHHHHHc----C--CCCC-cEEEeccCc-hHH---------------------HHHHHHHHcCCEEEEEeccCC-cc
Q 007454 174 AMKKRIMDFL----N--ISEN-DYVYDYESE-AVE---------------------AMIRTSEKRGARVMSAEFSWP-RL 223 (603)
Q Consensus 174 ~aR~~Ia~~l----n--a~~~-e~vf~~es~-sV~---------------------~~~~~a~~~Ga~V~~~~~~~~-~g 223 (603)
..|+.|++++ | ++++ +++.+..++ ++. .....++..|+++..+++++. +.
T Consensus 75 ~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 154 (403)
T PRK08636 75 KLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDF 154 (403)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccC
Confidence 5677777776 5 4566 587654432 111 122345567889988887532 24
Q ss_pred ccCHHHH----HHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEecccc----CCCCCCC-C
Q 007454 224 RINSEKL----RKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDACAL----GPKDMDS-F 290 (603)
Q Consensus 224 ~i~~~~L----~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDAaq~----~~~~m~~-l 290 (603)
.++.+.| ++.+... +.+++++.+..-+|.||..+|.+. ++.|++++++++.|-+-. -+....+ .
T Consensus 155 ~~d~~~l~~~l~~~~~~~---~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~ 231 (403)
T PRK08636 155 ELDEDQFFENLEKALRES---SPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSIL 231 (403)
T ss_pred ccChhhhhhHHHHHHhhc---cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChh
Confidence 6776654 4444321 235788877766899999999963 246899999999997521 1210011 1
Q ss_pred CCCCCCCc--EEEEcccccCCCCCCceEEEEEeCCCC
Q 007454 291 GLSLVRPD--FLICSFYQIFGENPSGFGCLFVKKSTV 325 (603)
Q Consensus 291 dls~~~~D--flv~S~hK~fG~~P~G~G~L~vkk~~~ 325 (603)
.+.. ..| +++.|+-|.||.+---+|.++..++++
T Consensus 232 ~~~~-~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li 267 (403)
T PRK08636 232 EVEG-AKDVAVESYTLSKSYNMAGWRVGFVVGNKKLV 267 (403)
T ss_pred cCCC-ccccEEEEEecccccCCccceeeeeeCCHHHH
Confidence 1211 123 346799999985322377776555443
No 246
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=98.67 E-value=6e-06 Score=88.45 Aligned_cols=145 Identities=10% Similarity=0.098 Sum_probs=89.5
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCc-hHHH--------------------HHHHHHHcCCEEEEEeccCCccc----cCH
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESE-AVEA--------------------MIRTSEKRGARVMSAEFSWPRLR----INS 227 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~-sV~~--------------------~~~~a~~~Ga~V~~~~~~~~~g~----i~~ 227 (603)
...|+.|++++++++++++.+..+. ++.. ....++..|.++..++.+...+. .+.
T Consensus 60 ~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~ 139 (360)
T PRK07392 60 RELRLALAQHHQLPPEWILPGNGAAELLTWAGRELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRL 139 (360)
T ss_pred HHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhCCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCH
Confidence 4789999999999999997764332 2221 23345567888888877522221 344
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccc--cCCCC-CCC-CC-CCCCCCcEEE
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACA--LGPKD-MDS-FG-LSLVRPDFLI 301 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq--~~~~~-m~~-ld-ls~~~~Dflv 301 (603)
+++++.. +++++++++--+|.||..++-+.+ ++++++++ +++|-+- +.... ..+ +. +....-=+++
T Consensus 140 ~~~~~~~-------~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i 211 (360)
T PRK07392 140 QTLPPQL-------TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIIL 211 (360)
T ss_pred HHHHHhc-------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEE
Confidence 4443322 257899999999999999998865 57888886 5668752 11110 001 11 1111112677
Q ss_pred EcccccCCCCCCceEEEEEeCCCC
Q 007454 302 CSFYQIFGENPSGFGCLFVKKSTV 325 (603)
Q Consensus 302 ~S~hK~fG~~P~G~G~L~vkk~~~ 325 (603)
.|+=|.||.+---+|.++...+.+
T Consensus 212 ~S~SK~~~l~GlRiG~~v~~~~~~ 235 (360)
T PRK07392 212 RSLTKFYSLPGLRLGYAIAHPDRL 235 (360)
T ss_pred EechhhhcCCchheeeeeCCHHHH
Confidence 899999984322378887665543
No 247
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.66 E-value=1.6e-06 Score=92.88 Aligned_cols=144 Identities=15% Similarity=0.140 Sum_probs=85.7
Q ss_pred HHHHHHHHHc-------CCCCCcEEEeccCc-hHHHHHHHH-HHcCCEEEEEeccCCcccc----------CHHHHHHHH
Q 007454 174 AMKKRIMDFL-------NISENDYVYDYESE-AVEAMIRTS-EKRGARVMSAEFSWPRLRI----------NSEKLRKMV 234 (603)
Q Consensus 174 ~aR~~Ia~~l-------na~~~e~vf~~es~-sV~~~~~~a-~~~Ga~V~~~~~~~~~g~i----------~~~~L~~~l 234 (603)
+.|+.|++++ |+++++++.+..+. ++..+.... .+.|..|......|+.... ..+++. .+
T Consensus 60 ~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~l 138 (357)
T TIGR03539 60 ELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAADDPT-EL 138 (357)
T ss_pred HHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccCChh-hc
Confidence 4566666666 57789998877543 444443433 3567777765544322110 000111 11
Q ss_pred hhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEecccc--C--CCCCCCCCCC----CCCCcEEEE
Q 007454 235 VSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDACAL--G--PKDMDSFGLS----LVRPDFLIC 302 (603)
Q Consensus 235 ~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDAaq~--~--~~~m~~ldls----~~~~Dflv~ 302 (603)
. ..+++++.++..+|.||..+|.+. ++.|+++|+++++|.+.. . +..+..++.. ...--+++.
T Consensus 139 ~-----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 213 (357)
T TIGR03539 139 D-----PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVH 213 (357)
T ss_pred C-----ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEe
Confidence 1 136889999999999999999763 246899999999998743 1 1100111111 011247888
Q ss_pred cccccCCCCCCc--eEEEEEeCCCC
Q 007454 303 SFYQIFGENPSG--FGCLFVKKSTV 325 (603)
Q Consensus 303 S~hK~fG~~P~G--~G~L~vkk~~~ 325 (603)
|+-|.||. .| +|.++..++.+
T Consensus 214 S~SK~~~~--~G~R~G~~i~~~~~~ 236 (357)
T TIGR03539 214 SLSKRSNL--AGYRAGFVAGDPALV 236 (357)
T ss_pred ccccccCC--CceeEEEEecCHHHH
Confidence 99999984 36 68877655543
No 248
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=98.66 E-value=1.7e-05 Score=86.43 Aligned_cols=93 Identities=12% Similarity=0.210 Sum_probs=60.4
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
|.+++++.+.. ++++|++--.++..|...| ++.+ .+|+++|+++++|=++.+ +.+ +.+.......|
T Consensus 173 d~~~l~~~l~~------~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~p 246 (403)
T PRK05093 173 DLAAVKAVIDD------HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTP 246 (403)
T ss_pred CHHHHHHHhcC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCC
Confidence 57788887752 5777776656555565543 4544 479999999999987542 211 11222233468
Q ss_pred cEEEEcccccCCCCCCc--eEEEEEeCCCCcCcC
Q 007454 298 DFLICSFYQIFGENPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~ 329 (603)
|++++| |.+| | | +|+++.++++++.+.
T Consensus 247 di~s~s--K~l~--~-G~rig~vv~~~~i~~~l~ 275 (403)
T PRK05093 247 DILTSA--KALG--G-GFPIGAMLTTAEIASHFK 275 (403)
T ss_pred CEEEec--cccc--C-CcceEEEEEcHHHHhhcC
Confidence 976654 9887 3 7 999999888765554
No 249
>PRK07049 methionine gamma-lyase; Validated
Probab=98.66 E-value=1.2e-06 Score=96.37 Aligned_cols=110 Identities=15% Similarity=0.148 Sum_probs=74.0
Q ss_pred HHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHh------CCcEEEEe
Q 007454 206 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQE------NDWHILID 278 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e------~g~~vlvD 278 (603)
+++.|+++..++. ..+.++|++.|... ..+++++++.+..-+|.||.++|++.+ ++++. +++.|++|
T Consensus 143 l~~~Gi~~v~~~~-----~~d~~~l~~~l~~~-~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvD 216 (427)
T PRK07049 143 FRNFGVGAVGFAD-----GLSEAAIGAAAEAA-AAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACD 216 (427)
T ss_pred HHhcCcEEEEEeC-----CCCHHHHHHHHHhh-ccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEE
Confidence 4456776554431 13567787777531 112468999999999999999999966 46766 79999999
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCC
Q 007454 279 ACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTV 325 (603)
Q Consensus 279 Aaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~ 325 (603)
-+-..+....++ ..+.|.++.|+-|.||+ ..| +|+++.+++..
T Consensus 217 ety~~~~~~~pl---~~g~divv~S~SK~~gG-~~glr~G~vv~~~~l~ 261 (427)
T PRK07049 217 NTLLGPVFQKPL---EHGADLSVYSLTKYVGG-HSDLVAGAVLGRKALI 261 (427)
T ss_pred CCccccccCCcc---ccCCCEEEEcCceeecC-CCCcEEEEEECCHHHH
Confidence 874433311233 34789999999999984 223 66666555443
No 250
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.66 E-value=8.3e-06 Score=89.76 Aligned_cols=102 Identities=11% Similarity=0.083 Sum_probs=81.8
Q ss_pred HHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCC
Q 007454 206 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGP 284 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~ 284 (603)
.++.|++|.++.+ .++.++++++|++ +|++|.+-.-+|.+|.+.|++.| ++|+++|+.+++|++-..|
T Consensus 121 l~~~Gi~v~~vd~-----~~d~~~l~~~I~~------~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP 189 (432)
T PRK06702 121 LRKLGIDVTFFNP-----NLTADEIVALAND------KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATP 189 (432)
T ss_pred HHHCCCEEEEECC-----CCCHHHHHHhCCc------CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCch
Confidence 5778999998854 3578899999874 68888888999999999999955 5899999999999986544
Q ss_pred CCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEe
Q 007454 285 KDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 285 ~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
- -...-++++|.++-|.-|+.|++-.++|.+.+.
T Consensus 190 ~---~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~ 223 (432)
T PRK06702 190 Y---LCQAFEHGANIIVHSTTKYIDGHASSLGGIVID 223 (432)
T ss_pred h---hCChhhcCCCEEEEccccccCCCcceeceEEEe
Confidence 2 122235789999999999988766678877773
No 251
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.64 E-value=6.2e-06 Score=90.83 Aligned_cols=143 Identities=14% Similarity=0.144 Sum_probs=92.2
Q ss_pred HHHHHHHHHHcC------CCCCcEEEeccC-chHHHHH---------------------HHHHHcCCEEEEEecc-CCcc
Q 007454 173 SAMKKRIMDFLN------ISENDYVYDYES-EAVEAMI---------------------RTSEKRGARVMSAEFS-WPRL 223 (603)
Q Consensus 173 ~~aR~~Ia~~ln------a~~~e~vf~~es-~sV~~~~---------------------~~a~~~Ga~V~~~~~~-~~~g 223 (603)
.+.|+.|+++++ +++++++++... +++..+. ..+...|+++..+++. ..+.
T Consensus 97 ~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~ 176 (430)
T PLN00145 97 LPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGW 176 (430)
T ss_pred HHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCC
Confidence 478889999884 467788765432 2222222 2334457777777653 1245
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEecccc--C--CCCCCCC-CCCC
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL--G--PKDMDSF-GLSL 294 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq~--~--~~~m~~l-dls~ 294 (603)
.++.++|++++.. +++++++..-+|.||.++|.+ ++++|+++|++|++|.+-. . +....++ .+..
T Consensus 177 ~~d~~~l~~~~~~------~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~ 250 (430)
T PLN00145 177 EVDLEGVEALADE------NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGE 250 (430)
T ss_pred cCCHHHHHHHhCc------CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcc
Confidence 6899999888753 588889988999999999954 2346899999999998621 1 1100111 1122
Q ss_pred CCCcEEEEcccccCCCCCCceEEEEEe
Q 007454 295 VRPDFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 295 ~~~Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
...=+++.|+=|.|+.|---+|.+++.
T Consensus 251 ~~~vi~~~S~SK~~~~pG~RlG~iv~~ 277 (430)
T PLN00145 251 VAPVLTLGSISKRWVVPGWRLGWIATC 277 (430)
T ss_pred cCcEEEEeccccccCCCCeeEEEEEEe
Confidence 223478889999988531227888763
No 252
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=98.64 E-value=2.8e-05 Score=83.68 Aligned_cols=92 Identities=13% Similarity=0.207 Sum_probs=60.8
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
+.++|++.+.+ +++++.+-...+.+|...+ ++.+ ++|+++|+++++|-++.+ +.. +..+......+
T Consensus 156 d~~~l~~~~~~------~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~ 229 (377)
T PRK02936 156 DIKALKEVMNE------EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDP 229 (377)
T ss_pred CHHHHHHhccC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCC
Confidence 56778877752 5788888777788887643 5544 478999999999988642 211 11111123357
Q ss_pred cEEEEcccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 298 DFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
|.+ ++-|.+| + | +|++..++++.+.+
T Consensus 230 di~--t~sK~l~--~-G~~ig~v~~~~~~~~~~ 257 (377)
T PRK02936 230 DIV--TVAKGLG--N-GIPVGAMIGKKELGTAF 257 (377)
T ss_pred cEE--EEccccc--C-CCccEEEEEcHHHHhhc
Confidence 854 5789888 2 5 78888877765444
No 253
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.63 E-value=2.7e-06 Score=91.21 Aligned_cols=144 Identities=15% Similarity=0.148 Sum_probs=85.0
Q ss_pred HHHHHHHHHc----C---CCCCcEEEeccCc-hHHHHHHHH-HHcCCEEEEEeccCCcccc----------CHHHHHHHH
Q 007454 174 AMKKRIMDFL----N---ISENDYVYDYESE-AVEAMIRTS-EKRGARVMSAEFSWPRLRI----------NSEKLRKMV 234 (603)
Q Consensus 174 ~aR~~Ia~~l----n---a~~~e~vf~~es~-sV~~~~~~a-~~~Ga~V~~~~~~~~~g~i----------~~~~L~~~l 234 (603)
+.|+.|++++ | +++++++.+..+. ++..+.... -+.|.+|..-...|+.-.. ..+.++. +
T Consensus 66 ~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-l 144 (364)
T PRK07865 66 ELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADSLTE-L 144 (364)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCChhh-C
Confidence 5677777777 3 6688998887654 443433443 2567666655444332110 0011111 1
Q ss_pred hhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEeccccC-C---CCCCCCCCC----CCCCcEEEE
Q 007454 235 VSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDACALG-P---KDMDSFGLS----LVRPDFLIC 302 (603)
Q Consensus 235 ~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDAaq~~-~---~~m~~ldls----~~~~Dflv~ 302 (603)
. ..+++++.+...+|.||.++|.+. ++.|+++|+++++|.+-.. . ..+..++.. ...-.+++.
T Consensus 145 ~-----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 219 (364)
T PRK07865 145 G-----PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVH 219 (364)
T ss_pred C-----cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEe
Confidence 1 135788888888999999999852 3467899999999987331 1 100011100 112248899
Q ss_pred cccccCCCCCCc--eEEEEEeCCCC
Q 007454 303 SFYQIFGENPSG--FGCLFVKKSTV 325 (603)
Q Consensus 303 S~hK~fG~~P~G--~G~L~vkk~~~ 325 (603)
|+-|.||. .| +|.++..++.+
T Consensus 220 S~SK~~~~--~GlRiG~i~~~~~~~ 242 (364)
T PRK07865 220 SLSKQSNL--AGYRAGFVAGDPALV 242 (364)
T ss_pred echhccCC--CceeeEEEecCHHHH
Confidence 99999984 26 77776555443
No 254
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=98.62 E-value=6.5e-06 Score=87.54 Aligned_cols=140 Identities=14% Similarity=0.234 Sum_probs=94.2
Q ss_pred HHHHHHHHHHcC---CCCCcEEEeccCc------------------hHHHHHHHHHHcCCEEEEEeccCCccccCHHHHH
Q 007454 173 SAMKKRIMDFLN---ISENDYVYDYESE------------------AVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLR 231 (603)
Q Consensus 173 ~~aR~~Ia~~ln---a~~~e~vf~~es~------------------sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~ 231 (603)
.+.|+.|+++++ +++++++.+..+. +-......++..|+++..++.+ +++.++...
T Consensus 59 ~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~-- 135 (335)
T PRK14808 59 EELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLT-KDLRIPEVN-- 135 (335)
T ss_pred HHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHhCcEEECCCCHHHHHHHHHHcCCeEEEecCC-CcCCCChhH--
Confidence 478999999999 8889987764331 2222344567789999999886 345444221
Q ss_pred HHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEecc--ccCCCCCCCCCCCCCCCcEEEEcccccC
Q 007454 232 KMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDAC--ALGPKDMDSFGLSLVRPDFLICSFYQIF 308 (603)
Q Consensus 232 ~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAa--q~~~~~m~~ldls~~~~Dflv~S~hK~f 308 (603)
+. .++++.++.-+|.||..++.+.+. ++ +++.+|++|-+ -+.+..+.++ +....-=+++.|+=|.|
T Consensus 136 --~~-------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~-~~~~~~vi~~~S~SK~~ 204 (335)
T PRK14808 136 --VG-------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDL-LKKYENLAVIRTFSKAF 204 (335)
T ss_pred --cc-------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHH-HHhCCCEEEEEechhhc
Confidence 21 368999999999999999998665 55 67999999975 2222211111 11222237778999999
Q ss_pred CCCCCc--eEEEEEeCCCCcCc
Q 007454 309 GENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 309 G~~P~G--~G~L~vkk~~~~~L 328 (603)
| ..| +|+++..+++++.+
T Consensus 205 ~--l~GlRvG~~v~~~~~~~~l 224 (335)
T PRK14808 205 S--LAAQRIGYVVSSEKFIDAY 224 (335)
T ss_pred c--CcccceEEEEeCHHHHHHH
Confidence 9 346 79999877665444
No 255
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.62 E-value=3.4e-05 Score=85.73 Aligned_cols=222 Identities=15% Similarity=0.193 Sum_probs=133.5
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
+.++|++.|........++..|.+-.+....|.+.| ++.+ ++|+++|+.+++|=+|.+ |.. |--.......|
T Consensus 214 d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~P 293 (459)
T PRK11522 214 NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQP 293 (459)
T ss_pred CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCC
Confidence 567788877531111234545555445556899888 6655 479999999999988753 221 00111123469
Q ss_pred cEEEEcccccCCCCCCc---eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCC
Q 007454 298 DFLICSFYQIFGENPSG---FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATN 374 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G---~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~ 374 (603)
|.+++ =|-+|+ | +|+++++++.++.+....+. -.+|.
T Consensus 294 Divt~--gK~lgg---G~~Pigav~~~~~i~~~~~~~~~~-----------------------------------~~~T~ 333 (459)
T PRK11522 294 DILCL--AKALGG---GVMPIGATIATEEVFSVLFDNPFL-----------------------------------HTTTF 333 (459)
T ss_pred CEEEe--chhhhC---CCccceeEEEcHHHHHHhccCCcc-----------------------------------cCCCC
Confidence 98755 587663 3 79999988765433210000 01111
Q ss_pred --Chhh-hhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 007454 375 --TFSG-PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNA 451 (603)
Q Consensus 375 --n~~g-i~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~ 451 (603)
|..+ .+++ +.|+.+++ +.+.++++.+.++|.++
T Consensus 334 ~gnp~~~Aaal-----------------------------------------a~L~~i~~---~~l~~~~~~~g~~l~~~ 369 (459)
T PRK11522 334 GGNPLACAAAL-----------------------------------------ATINVLLE---QNLPAQAEQKGDYLLDG 369 (459)
T ss_pred CCCHHHHHHHH-----------------------------------------HHHHHHhc---chHHHHHHHHHHHHHHH
Confidence 1111 1111 46776654 34668899999999999
Q ss_pred HhcCC--CCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHH
Q 007454 452 LMKLQ--HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDN 529 (603)
Q Consensus 452 L~~L~--h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~ 529 (603)
|+++. |+. .+..|-| +|.++.+.+.+.+ ....+...+. ++||.++..
T Consensus 370 L~~l~~~~~~----~i~~VrG------~Gl~~giel~~~~---~~~~i~~~l~-~~Gvl~~~~----------------- 418 (459)
T PRK11522 370 FRQLAREYPD----LVQEARG------KGMLMAIEFVDNE---IGYNFASEMF-RQRVLVAGT----------------- 418 (459)
T ss_pred HHHHHHhCCC----ceeeEEe------ceeEEEEEecCch---HHHHHHHHHH-HCCeEEEec-----------------
Confidence 98873 321 1123333 4778888886531 1222334444 478887521
Q ss_pred HHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 530 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
.....++|+.+....|.+||+++++.|.+.+++
T Consensus 419 ---------------------~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~ 451 (459)
T PRK11522 419 ---------------------LNNAKTIRIEPPLTLTIEQCEQVLKAARKALAA 451 (459)
T ss_pred ---------------------CCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 001248999999999999999999999998865
No 256
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.60 E-value=4.6e-06 Score=91.40 Aligned_cols=223 Identities=11% Similarity=0.092 Sum_probs=132.1
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCcccccccc-ccHHHH----HHHHhCCcEEEEecccc-CCCC--CCCCCCCCCCCc
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGAR-YPYLWM----RIAQENDWHILIDACAL-GPKD--MDSFGLSLVRPD 298 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~-~pl~~i----~~a~e~g~~vlvDAaq~-~~~~--m~~ldls~~~~D 298 (603)
.+.+++.+........++..|.+.-+.+..|.+ .|-..+ ++|+++|+++++|-+|. .|.. +...+.....||
T Consensus 178 ~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD 257 (412)
T TIGR02407 178 IAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD 257 (412)
T ss_pred HHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC
Confidence 556777775321111245666665566678884 444433 36899999999999875 2210 112333456799
Q ss_pred EEEEcccccCCCCCCc--eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCCh
Q 007454 299 FLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTF 376 (603)
Q Consensus 299 flv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~ 376 (603)
++++| |++| +.| +|+++++++. ..+.+...+++ + +.|.
T Consensus 258 i~~~~--K~lg--~~G~pigav~~~~~~-~~~~~~~~~~T--------------------------------~---~gnp 297 (412)
T TIGR02407 258 IVCLS--KSIS--GYGLPLALTLIKPEL-DVWKPGEHNGT--------------------------------F---RGNN 297 (412)
T ss_pred EEEec--hhcc--CCccceeEEEEchhh-hccCCCccCCC--------------------------------C---CccH
Confidence 99887 9988 556 8999998775 33322111100 0 0122
Q ss_pred hhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHhcC
Q 007454 377 SGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQ-VDSLGLTMISRRGRCLINWLVNALMKL 455 (603)
Q Consensus 377 ~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~-~~~iGl~~i~~r~~~L~~~L~~~L~~L 455 (603)
.+.++. .+.++. +. -+.+.++++.+.++|.++|+.+
T Consensus 298 l~~aaa----------------------------------------~a~l~~~i~---~~~l~~~~~~~g~~l~~~l~~l 334 (412)
T TIGR02407 298 LAFVTA----------------------------------------TAALEYYWS---DDAFEKAVQRKSEIIQERLDRI 334 (412)
T ss_pred HHHHHH----------------------------------------HHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHH
Confidence 221110 045663 33 2467788888888888888765
Q ss_pred CCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhh
Q 007454 456 QHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTD 535 (603)
Q Consensus 456 ~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~ 535 (603)
... .|.+ + +.. ..+|.++.+.+.+.+ . ...+.+.+.++||.++..
T Consensus 335 ~~~----~~~~-~-~~v--rg~Gl~~~l~l~~~~---~-~~~~~~~~~~~Gv~v~~~----------------------- 379 (412)
T TIGR02407 335 VAE----YPEL-I-KQV--RGRGLMQGIECGDGD---L-AGKIAKAAFENGLIIETS----------------------- 379 (412)
T ss_pred Hhh----CCCc-e-Eee--ecceeEEEEEecChH---H-HHHHHHHHHHCCCEEecc-----------------------
Confidence 321 1101 1 110 235677888886521 1 123344445678887531
Q ss_pred cccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 007454 536 REAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~ 582 (603)
.....+||+++.+..|.+||+++++.|.+.|+
T Consensus 380 ---------------~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 380 ---------------GPNDEVIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred ---------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 01124899999999999999999999998875
No 257
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.59 E-value=5.1e-05 Score=83.97 Aligned_cols=220 Identities=14% Similarity=0.206 Sum_probs=128.5
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCCCCC---CCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKDMDS---FGLSLVR 296 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~m~~---ldls~~~ 296 (603)
+.+.+++.|........++..|.+--+...-|.+.| ++.+ ++|+++|+.+++|=+|.+ |.. .. .......
T Consensus 207 d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt-G~~~a~e~~gv~ 285 (442)
T TIGR03372 207 DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRT-GKMFACEHEGVQ 285 (442)
T ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcc-ccchhhhhcCCC
Confidence 456677766421111234555555444456799888 7655 479999999999988753 221 11 1112346
Q ss_pred CcEEEEcccccCCCCCCc---eEEEEEeCCCCcCcCCC--CCCCceeccccccccccccccCCCCCCcccCccccccccc
Q 007454 297 PDFLICSFYQIFGENPSG---FGCLFVKKSTVPILVDN--TSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVA 371 (603)
Q Consensus 297 ~Dflv~S~hK~fG~~P~G---~G~L~vkk~~~~~L~p~--~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~ 371 (603)
||+++ +=|-+|. | +|+++.++++++.+... .++++ + .
T Consensus 286 PDivt--~gK~lg~---G~~Pigavv~~~~i~~~~~~~~~~~~~T----------~-----------------------~ 327 (442)
T TIGR03372 286 PDILC--LAKALGG---GVMPIGATIATEAVFSVLFDNPFLHTTT----------F-----------------------G 327 (442)
T ss_pred CCeee--ehhhhcC---CcccceEEEecHHHHHhhhccCccccCC----------C-----------------------C
Confidence 99887 4586662 4 79999988876544210 00000 0 0
Q ss_pred CCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 007454 372 ATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNA 451 (603)
Q Consensus 372 GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~ 451 (603)
| .+....+++ +.|+.+++- .+.++++.+.++|.++
T Consensus 328 g-np~~~Aaa~-----------------------------------------a~L~~i~~~---~l~~~~~~~G~~l~~~ 362 (442)
T TIGR03372 328 G-NPLACAAAL-----------------------------------------ATINELLEK---NLPAQAAIKGDFLLDG 362 (442)
T ss_pred C-CHHHHHHHH-----------------------------------------HHHHHHHhc---cHHHHHHHHHHHHHHH
Confidence 1 111111111 467776553 3556778888888888
Q ss_pred HhcCC--CCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHH
Q 007454 452 LMKLQ--HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDN 529 (603)
Q Consensus 452 L~~L~--h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~ 529 (603)
|.++. ++. .+..+- .+|.++.+.+.+.+ ....++..+. ++||.++..
T Consensus 363 L~~l~~~~~~----~i~~vR------G~Gl~~giel~~~~---~~~~i~~~l~-~~Gvl~~~~----------------- 411 (442)
T TIGR03372 363 FQQLAAEYPD----LIIEAR------GKGLLMAIEFRDNE---IGYAFAKELF-QQNILVAGT----------------- 411 (442)
T ss_pred HHHHHHhCCC----ceEEEe------cceEEEEEEeCChH---HHHHHHHHHH-HCCcEEeec-----------------
Confidence 87763 321 112232 25778888875421 1122334443 478877421
Q ss_pred HHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 007454 530 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l 581 (603)
.....++|+++....|.+|||++++.+.+.|
T Consensus 412 ---------------------~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 412 ---------------------LNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred ---------------------CCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 0011489999999999999999999988753
No 258
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=98.56 E-value=1.9e-05 Score=86.18 Aligned_cols=217 Identities=12% Similarity=0.138 Sum_probs=126.2
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccc-cHHH---H-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY-PYLW---M-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~-pl~~---i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
+.++|++.|.. +++.|.+--+....|.+. |.++ + ++|+++|+++++|=++.+ +.. +.........|
T Consensus 172 d~~~l~~~l~~------~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~p 245 (406)
T PRK12381 172 DLNSASALIDD------QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTP 245 (406)
T ss_pred CHHHHHHhccC------CeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCC
Confidence 56788887752 466666665554455443 3443 3 468999999999987632 221 11112223468
Q ss_pred cEEEEcccccCCCCCCc--eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCC
Q 007454 298 DFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 375 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n 375 (603)
|.+++ =|.+| + | +|++..++++++.+.+...+.+ + + .|
T Consensus 246 Di~t~--sK~l~--g-G~~ig~~~~~~~~~~~~~~~~~~~t--------------------------------~--~-~~ 285 (406)
T PRK12381 246 DVLTT--AKALG--G-GFPIGAMLTTEKCASVMTVGTHGTT--------------------------------Y--G-GN 285 (406)
T ss_pred CEEEe--hhhhh--C-CCceEEEEEcHHHHhhcCCCCCCCC--------------------------------C--C-CC
Confidence 97644 59876 2 4 8888888877654442111100 0 1 11
Q ss_pred hhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC
Q 007454 376 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 455 (603)
Q Consensus 376 ~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L 455 (603)
....++.. ++|+.+.. ..+.++++.+.++|.++|.++
T Consensus 286 pl~~aaa~----------------------------------------a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l 322 (406)
T PRK12381 286 PLASAVAG----------------------------------------KVLELINT---PEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_pred HHHHHHHH----------------------------------------HHHHHHhh---ccHHHHHHHHHHHHHHHHHHH
Confidence 11111111 45665542 356778888999999999876
Q ss_pred CCCCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhh
Q 007454 456 QHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKT 534 (603)
Q Consensus 456 ~h~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~ 534 (603)
.. ..+.+ .+ ...|.++.+.+.+.... ....+...+.++||.+...
T Consensus 323 ~~----~~~~~~~v------rg~Gl~~~~~l~~~~~~--~~~~~~~~l~~~Gv~v~~~---------------------- 368 (406)
T PRK12381 323 NA----RYGLFSEI------RGLGLLIGCVLNAEYAG--KAKQISQEAAKAGVMVLIA---------------------- 368 (406)
T ss_pred Hh----hCCCEEEE------ecCeEEEEEEecCchhh--HHHHHHHHHHHCCcEEeeC----------------------
Confidence 31 11212 11 12455667766542111 1123444555678887421
Q ss_pred hcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 535 DREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+...||+++.+..|.+||+++++.|.++++.
T Consensus 369 ------------------g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 369 ------------------GPNVVRFAPALNISEEEITTGLDRFARACER 399 (406)
T ss_pred ------------------CCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 1148999999999999999999999998864
No 259
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=98.54 E-value=2.3e-05 Score=87.28 Aligned_cols=150 Identities=13% Similarity=0.169 Sum_probs=93.8
Q ss_pred HHHHHHHHHcC--------CCCCcEEEeccCch-HHH---------------------HHHHHH-HcCCEEEEEeccC-C
Q 007454 174 AMKKRIMDFLN--------ISENDYVYDYESEA-VEA---------------------MIRTSE-KRGARVMSAEFSW-P 221 (603)
Q Consensus 174 ~aR~~Ia~~ln--------a~~~e~vf~~es~s-V~~---------------------~~~~a~-~~Ga~V~~~~~~~-~ 221 (603)
+.|+.|+++++ +++++++.+..++. +.. ....+. ..|++++.++.+. .
T Consensus 90 ~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~ 169 (468)
T PLN02450 90 AFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSN 169 (468)
T ss_pred HHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCcc
Confidence 58888888885 57888876543221 111 112233 4799999988753 3
Q ss_pred ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEecccc----CCCCCCC-CCC
Q 007454 222 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACAL----GPKDMDS-FGL 292 (603)
Q Consensus 222 ~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq~----~~~~m~~-ldl 292 (603)
+..++.++|++.+....+...+++++.++.-+|.||..+|.+.+ +.|++++++|++|-+-. .+....+ +.+
T Consensus 170 ~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~ 249 (468)
T PLN02450 170 GFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEV 249 (468)
T ss_pred CCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHH
Confidence 44678899988876421122357777777789999999998743 45789999999997522 1210011 111
Q ss_pred C---------CCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 007454 293 S---------LVRPDFLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 293 s---------~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
. ...-=+++-|+=|.||.+---+|+++..+.
T Consensus 250 ~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~ 289 (468)
T PLN02450 250 LKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDE 289 (468)
T ss_pred hhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCH
Confidence 0 011126788999999843223898887644
No 260
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.54 E-value=2.7e-05 Score=83.74 Aligned_cols=299 Identities=14% Similarity=0.063 Sum_probs=166.6
Q ss_pred HHHHcCCCCCcEEEeccCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccc
Q 007454 179 IMDFLNISENDYVYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGA 258 (603)
Q Consensus 179 Ia~~lna~~~e~vf~~es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~ 258 (603)
.+..|++.|.+.|.+..-. -.+-+......|++.+.++++..++.||.+.|++.|.+ +|+-++..|. -|.
T Consensus 65 aL~al~ig~GDeVI~ps~T-fvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~------~tKAIipVhl---~G~ 134 (374)
T COG0399 65 ALLALAIGPGDEVIVPSFT-FVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITP------RTKAIIPVHL---AGQ 134 (374)
T ss_pred HHHhcCCCCCCEEEecCCc-hHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHccc------CCeEEEEehh---ccC
Confidence 4455677775544332111 11112223346999999999987899999999999974 4776666654 799
Q ss_pred cccHH-HHHHHHhCCcEEEEeccccCCCCCCCCCCCC--CCCcEEEEccc--ccCCCCCCc-eEEEEEeCCCC-cCcCCC
Q 007454 259 RYPYL-WMRIAQENDWHILIDACALGPKDMDSFGLSL--VRPDFLICSFY--QIFGENPSG-FGCLFVKKSTV-PILVDN 331 (603)
Q Consensus 259 ~~pl~-~i~~a~e~g~~vlvDAaq~~~~~m~~ldls~--~~~Dflv~S~h--K~fG~~P~G-~G~L~vkk~~~-~~L~p~ 331 (603)
.-+++ |+++|+++|++|+-||||+.|. ...=+. .--|+-+|||| |.++ +| =|+++.+.+-+ +.++ .
T Consensus 135 ~~dm~~i~~la~~~~l~vIEDaAqa~Ga---~y~gk~vGt~Gd~~~fSF~~~K~it---tgEGGav~tnd~ela~k~~-~ 207 (374)
T COG0399 135 PCDMDAIMALAKRHGLPVIEDAAQAHGA---TYKGKKVGSFGDIGAFSFHATKNLT---TGEGGAVVTNDEELAEKAR-S 207 (374)
T ss_pred CCCHHHHHHHHHHcCCeEEEEcchhccC---eecCcccccccceEEEEecCCCCcc---ccCceEEEeCCHHHHHHHH-H
Confidence 99998 6679999999999999998885 222111 12488888887 5665 34 45555555432 2222 1
Q ss_pred CCC-CceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhc
Q 007454 332 TSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKN 410 (603)
Q Consensus 332 ~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 410 (603)
+.. |..... ...++. .+.|+. ..-++|++.
T Consensus 208 lr~hG~~~~~--~~~y~~--------------------~~~G~N---------------~rm~~iqAA------------ 238 (374)
T COG0399 208 LRNHGLSRDA--VFKYLH--------------------EELGYN---------------YRLTEIQAA------------ 238 (374)
T ss_pred HHHhCcCCCc--ccccee--------------------eecccc---------------cCHHHHHHH------------
Confidence 111 432100 001110 112221 011222222
Q ss_pred cCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCC-CCCCEEEEEEccCC
Q 007454 411 ANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRF-DRGPALAFNVFDWK 489 (603)
Q Consensus 411 ~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~-~rg~ivsFnv~~~~ 489 (603)
.++.+++. ++.+.++-+.+.++..+.|+++. .+.+--+.... ..-.....-++..
T Consensus 239 -------------igl~QL~~--l~~~~~~R~~~a~~Y~~~l~~~~--------~~~~p~~~~~~~~~~~~~~i~~~~~- 294 (374)
T COG0399 239 -------------IGLAQLER--LDEINERRREIAQIYAEALKGLP--------GITLPPEPDGAVHAWHLYTILVDEE- 294 (374)
T ss_pred -------------HHHHHHHH--HHHHHHHHHHHHHHHHHHhhcCC--------CccccCCCCCceeeeeeeEEEecCC-
Confidence 24444443 67777777889999999998763 12211111100 0122333333332
Q ss_pred CCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHH
Q 007454 490 REKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFED 569 (603)
Q Consensus 490 g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eD 569 (603)
.+..+.+...+...||. ++.++-+-...+. .+... ..+...+.. ........+++=++..-|.+|
T Consensus 295 --~~~R~~l~~~L~~~gi~--~~~~~~P~~~~~~-------~~~~~-~~~~~~lp~---ae~~~~r~l~LP~~p~l~~~~ 359 (374)
T COG0399 295 --GISRDALMESLKEAGVG--AVVYFRPLHLQPA-------YRQLG-YFPEGDLPN---AEDLSERILSLPLHPNLSEED 359 (374)
T ss_pred --CCCHHHHHHHHHhCCCC--ceEEeeccccchh-------hhccc-ccccCCCch---HHHHhhCeEEccCCCCCCHHH
Confidence 24556677777777888 4445444222211 11110 000000000 011223589999999999999
Q ss_pred HHHHHHHHHHHHh
Q 007454 570 VYRLWAFVAQFLD 582 (603)
Q Consensus 570 Vd~l~~~l~~~l~ 582 (603)
++++++.|++++.
T Consensus 360 ~~~V~~~l~~~~~ 372 (374)
T COG0399 360 VDRVIEALKEVLG 372 (374)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999874
No 261
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=98.54 E-value=1.9e-05 Score=84.92 Aligned_cols=145 Identities=16% Similarity=0.304 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHcC-CCCCcEEEeccCchH-HH---------------------HHHHHHHcCCEEEEEeccCCccccCHH
Q 007454 172 ESAMKKRIMDFLN-ISENDYVYDYESEAV-EA---------------------MIRTSEKRGARVMSAEFSWPRLRINSE 228 (603)
Q Consensus 172 ~~~aR~~Ia~~ln-a~~~e~vf~~es~sV-~~---------------------~~~~a~~~Ga~V~~~~~~~~~g~i~~~ 228 (603)
..+.|++++++.| .++++++-..-++.+ .. -...++..|+++..++.. + ..++.+
T Consensus 59 ~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~-~-~~~d~~ 136 (356)
T COG0079 59 YRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLK-E-FRLDLD 136 (356)
T ss_pred HHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEeccc-c-cccCHH
Confidence 3578999999999 677777543322211 11 122355678888888876 3 678888
Q ss_pred HHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHh--CCcEEEEecc--ccCCCCCCCCCCCCCCCc--EEE
Q 007454 229 KLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQE--NDWHILIDAC--ALGPKDMDSFGLSLVRPD--FLI 301 (603)
Q Consensus 229 ~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e--~g~~vlvDAa--q~~~~~m~~ldls~~~~D--flv 301 (603)
.+...+.. +++||.+.-=+|.||...+.+.+. ++.. .++.|+||-| -+.+. ..+.+-. .++ ++.
T Consensus 137 ~~~~~~~~------~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~--~~~~l~~-~~~nlivl 207 (356)
T COG0079 137 AILAAIRD------KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPE--SSLELLK-YPPNLIVL 207 (356)
T ss_pred HHHHhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCc--hhhhhcc-CCCCEEEE
Confidence 88888863 589999999999999999998664 3332 2889999975 45553 2344333 355 666
Q ss_pred EcccccCCCCCCc--eEEEEEeCCCCcCcC
Q 007454 302 CSFYQIFGENPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 302 ~S~hK~fG~~P~G--~G~L~vkk~~~~~L~ 329 (603)
=||=|.||- -| +|..+..+++++.|+
T Consensus 208 RTfSKa~gL--AGlRlGy~ia~~~~i~~l~ 235 (356)
T COG0079 208 RTFSKAFGL--AGLRVGYAIANPELIAALN 235 (356)
T ss_pred EecHHhhhc--chhceeeccCCHHHHHHHH
Confidence 799999995 25 677766666655443
No 262
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.52 E-value=2e-05 Score=83.54 Aligned_cols=134 Identities=12% Similarity=0.152 Sum_probs=79.2
Q ss_pred HHHHHHHHHHcCCCCCcEEEeccCchHHH--------------------HHHHHHHcCCEEEEEeccCCccccCHHHHHH
Q 007454 173 SAMKKRIMDFLNISENDYVYDYESEAVEA--------------------MIRTSEKRGARVMSAEFSWPRLRINSEKLRK 232 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~~e~vf~~es~sV~~--------------------~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~ 232 (603)
...|+.|+++++. ++++.+..++.... ....++..|+++..++ .+++++
T Consensus 52 ~~Lr~~ia~~~~~--~~I~it~Gs~~al~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~---------~~~~~~ 120 (330)
T PRK05664 52 DGLEAAARAYYGA--PQLLPVAGSQAAIQALPRLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELD---------EAEVEA 120 (330)
T ss_pred HHHHHHHHHHhCC--CCEEECcCHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCeEEEec---------hhhHhh
Confidence 3678899999985 57776654432111 1222333444444443 345555
Q ss_pred HHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEeccccCCCCCCC-CCCCCCCCcEEEEccccc
Q 007454 233 MVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACALGPKDMDS-FGLSLVRPDFLICSFYQI 307 (603)
Q Consensus 233 ~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq~~~~~m~~-ldls~~~~Dflv~S~hK~ 307 (603)
.+. +++++++.--+|.||.++|.+.+ +.|+++|++|++|=+-.-.....+ ..+....-=+++-||-|.
T Consensus 121 ~~~-------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~ 193 (330)
T PRK05664 121 ALD-------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKF 193 (330)
T ss_pred hhc-------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeecccc
Confidence 553 35555555557999999998633 346788999999976322110001 222211112789999999
Q ss_pred CCCCCCc--eEEEEEeCCCCc
Q 007454 308 FGENPSG--FGCLFVKKSTVP 326 (603)
Q Consensus 308 fG~~P~G--~G~L~vkk~~~~ 326 (603)
||. .| +|.++..+++.+
T Consensus 194 ~gl--~GlRiG~~v~~~~l~~ 212 (330)
T PRK05664 194 FGL--AGARLGFVLAEPALLR 212 (330)
T ss_pred ccC--CCcceEEEEeCHHHHH
Confidence 994 26 788887665543
No 263
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=98.52 E-value=1.2e-05 Score=87.33 Aligned_cols=130 Identities=13% Similarity=0.155 Sum_probs=86.1
Q ss_pred HHHHHHHHcCCCCCcEEEecc-Cc-hHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCc
Q 007454 175 MKKRIMDFLNISENDYVYDYE-SE-AVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLH 252 (603)
Q Consensus 175 aR~~Ia~~lna~~~e~vf~~e-s~-sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~ 252 (603)
+...++.++... ++++.... -. ...-+...+.+.|.+|.+++.. +.++|+++|++ +|++|-+-.-
T Consensus 83 i~~~l~~ll~~G-d~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~------d~~~l~~~l~~------~t~~v~~Esp 149 (386)
T PF01053_consen 83 ISAALLALLKPG-DHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPT------DLEALEAALRP------NTKLVFLESP 149 (386)
T ss_dssp HHHHHHHHS-TT-BEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTT------SHHHHHHHHCT------TEEEEEEESS
T ss_pred HHHHHHhhcccC-CceEecCCccCcchhhhhhhhcccCcEEEEeCch------hHHHHHhhccc------cceEEEEEcC
Confidence 444555665442 33433211 11 2222334566789999988753 57899999974 7999999999
Q ss_pred cccccccccHHHH-HHHHhCC-cEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCc---eEEEEEeC
Q 007454 253 SRMTGARYPYLWM-RIAQEND-WHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSG---FGCLFVKK 322 (603)
Q Consensus 253 Sn~TG~~~pl~~i-~~a~e~g-~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G---~G~L~vkk 322 (603)
+|.+..+.|++.+ ++||++| +.++||.+-..|....||+ +++|+++-|.-|.+++. | .|++.++.
T Consensus 150 sNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~---~GaDivv~S~TKyl~Gh--sdv~~G~vv~~~ 219 (386)
T PF01053_consen 150 SNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQNPLE---LGADIVVHSATKYLSGH--SDVMGGAVVVNG 219 (386)
T ss_dssp BTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGG---GT-SEEEEETTTTTTTS--SSE-EEEEEESS
T ss_pred CCcccccccHHHHHHHHHHhCCceEEeeccccceeeeccCc---CCceEEEeeccccccCC--cceeeEEEEECc
Confidence 9999999999966 5899999 9999999866664223443 58999999999998743 5 56666554
No 264
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.51 E-value=0.00013 Score=80.70 Aligned_cols=97 Identities=16% Similarity=0.237 Sum_probs=61.1
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCC--CCCCCCCCCCCc
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKD--MDSFGLSLVRPD 298 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~--m~~ldls~~~~D 298 (603)
.++|+++|... ..+++..|.+--+....|.+.| ++.+ ++|+++|+++++|=+|. +|.. |.-.......||
T Consensus 201 ~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD 278 (442)
T PRK13360 201 ADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPD 278 (442)
T ss_pred HHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCc
Confidence 35677777531 1134656666556667899988 7766 47999999999998773 3321 111122234699
Q ss_pred EEEEcccccCCC--CCCceEEEEEeCCCCcCcC
Q 007454 299 FLICSFYQIFGE--NPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 299 flv~S~hK~fG~--~P~G~G~L~vkk~~~~~L~ 329 (603)
++++ =|-+|+ -| +|++.+++++++.+.
T Consensus 279 ivt~--gK~l~gG~~P--~gav~~~~~i~~~~~ 307 (442)
T PRK13360 279 LLTC--AKGLTNGAIP--MGAVFVSSEIHDAFM 307 (442)
T ss_pred eeee--eeccccCccc--eEEEEEcHHHHHHhh
Confidence 8755 586652 12 888888888765443
No 265
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=98.51 E-value=1.8e-05 Score=85.91 Aligned_cols=114 Identities=14% Similarity=0.086 Sum_probs=74.3
Q ss_pred HHHHcCCEEEEEeccCC-ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEec
Q 007454 205 TSEKRGARVMSAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDA 279 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~-~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDA 279 (603)
.++..|+++..+|.+.. +..++.++|++.+.. +++++.++.-+|.||.+++.+.+ +.|+++++++++|-
T Consensus 133 ~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~------~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De 206 (396)
T PRK09147 133 AALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA------RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDE 206 (396)
T ss_pred HHHhcCCEEEEeccCccccCccCHHHHHHHHhh------ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeec
Confidence 34456888888887522 236888999887753 57888888899999999998633 35789999999997
Q ss_pred cc--cC--CCCCCCCC-C---CCCCCc-----EEEEcccccCCCCCCceEEEEEeCCCC
Q 007454 280 CA--LG--PKDMDSFG-L---SLVRPD-----FLICSFYQIFGENPSGFGCLFVKKSTV 325 (603)
Q Consensus 280 aq--~~--~~~m~~ld-l---s~~~~D-----flv~S~hK~fG~~P~G~G~L~vkk~~~ 325 (603)
+- +. +.. .+.. + ...+.| +++.|+=|.||.+-.-+|.++..+.++
T Consensus 207 ~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~ 264 (396)
T PRK09147 207 CYSEIYFDEAA-PPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALL 264 (396)
T ss_pred cccccccCCCC-CCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHH
Confidence 52 21 100 0110 1 111222 888999998885312378777655443
No 266
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.51 E-value=2.5e-06 Score=92.85 Aligned_cols=152 Identities=12% Similarity=0.077 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEe---------------------ccCchHHHHHHHHHHcCCEEEEEeccCCc----cc
Q 007454 170 GLESAMKKRIMDFLNISENDYVYD---------------------YESEAVEAMIRTSEKRGARVMSAEFSWPR----LR 224 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~---------------------~es~sV~~~~~~a~~~Ga~V~~~~~~~~~----g~ 224 (603)
..+.++.+..|+++|++..=|+-. -.-|++.++...+.-.|++.++++..... +.
T Consensus 66 G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~~ 145 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIGG 145 (417)
T ss_dssp THHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BEE
T ss_pred cHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCccC
Confidence 567889999999999865533210 01122333334445568999888764221 23
Q ss_pred cCH-----HHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccC--CCCCCCCCCCCCC
Q 007454 225 INS-----EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALG--PKDMDSFGLSLVR 296 (603)
Q Consensus 225 i~~-----~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~--~~~m~~ldls~~~ 296 (603)
|+. +.++++|...... +..++++++.-+ --|+.++++.| ++||++|+.|+||.|..+ +-.-.+-+-...+
T Consensus 146 i~~~~~~~~~i~~~l~~~p~~-k~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~~g 223 (417)
T PF01276_consen 146 ISPDEFNEEDIEEALKEHPDA-KAPRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALALG 223 (417)
T ss_dssp B-GGGGSHHHHHHHHHHCTTC-HCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSSTT
T ss_pred CChhhhhHHHHHHHHHhCccc-cCceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhhcc
Confidence 455 9999999863221 125667777665 48999999955 589999999999986432 2111234445678
Q ss_pred Cc-------EEEEcccccCCCCCCceEEEEEeCCC
Q 007454 297 PD-------FLICSFYQIFGENPSGFGCLFVKKST 324 (603)
Q Consensus 297 ~D-------flv~S~hK~fG~~P~G~G~L~vkk~~ 324 (603)
+| +++-|.||..+. .+....|.+|.+.
T Consensus 224 ad~~~~~~~~vvqS~HKtL~a-ltQts~lh~~~~~ 257 (417)
T PF01276_consen 224 ADRPNDPGIIVVQSTHKTLPA-LTQTSMLHVKGDR 257 (417)
T ss_dssp SS-CTSBEEEEEEEHHHHSSS--TT-EEEEEETCC
T ss_pred Cccccccceeeeechhhcccc-cccceEEEecCCC
Confidence 99 999999999887 8999999999875
No 267
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.50 E-value=0.00016 Score=80.14 Aligned_cols=227 Identities=12% Similarity=0.115 Sum_probs=129.4
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCC--CCCCCCCCCCCcE
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKD--MDSFGLSLVRPDF 299 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~--m~~ldls~~~~Df 299 (603)
++|++.|.... .++...|.+--+....|.+.| ++.+ ++|+++|+.+++|=+|. .|.. |.-.+.....||+
T Consensus 205 ~~l~~~i~~~~--~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi 282 (445)
T PRK09221 205 DDLERLVALHD--ASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDI 282 (445)
T ss_pred HHHHHHHHhcC--CCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCE
Confidence 56777775311 134655555556667899998 7766 48999999999999874 2220 1111222346898
Q ss_pred EEEcccccCC--CCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 300 LICSFYQIFG--ENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 300 lv~S~hK~fG--~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
++++ |-+| +.| +|++.+++++++.+.... .... .+ +..+|.. .
T Consensus 283 ~~~g--K~l~gG~~P--i~av~~~~~i~~~~~~~~-~~~~-------~~----------------------~~~~T~~-~ 327 (445)
T PRK09221 283 ITFA--KGLTNGAIP--MGAVIASDEIYDAFMQGP-EYAI-------EF----------------------FHGYTYS-A 327 (445)
T ss_pred EEec--cccccCccc--ceeeEEcHHHHHhhccCc-cccc-------cc----------------------ccccCCC-c
Confidence 7665 6543 113 788888888765543210 0000 00 0011211 1
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
.+++++. ++ +.|+.+.+- .+.++++.+.++|.+.|.++.
T Consensus 328 ~pl~~aa------------a~-------------------------a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~- 366 (445)
T PRK09221 328 HPVACAA------------GL-------------------------ATLDIYREE---DLFERAAELAPYFEDAVHSLK- 366 (445)
T ss_pred CHHHHHH------------HH-------------------------HHHHHHHhc---cHHHHHHHHHHHHHHHHHhhc-
Confidence 1222220 11 466666543 356788999999999998873
Q ss_pred CCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCCCc-cCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhh
Q 007454 458 PNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREK-IEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTD 535 (603)
Q Consensus 458 ~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g~~-v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~ 535 (603)
+.|.| .+- .+|-++.+.+.+..... .....+.+.+-++||.++.+
T Consensus 367 ----~~~~v~~vr------g~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~----------------------- 413 (445)
T PRK09221 367 ----GLPHVIDIR------NIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT----------------------- 413 (445)
T ss_pred ----cCCCEEEEe------cCceEEEEEEecccccccchHHHHHHHHHHCCeEEeec-----------------------
Confidence 12222 111 24555566654422111 01122333344567776521
Q ss_pred cccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 536 REAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
..++|+++.+..|.+||+++++.|.+.|++
T Consensus 414 ------------------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 414 ------------------GDTIALSPPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred ------------------CCEEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 137999999999999999999999988753
No 268
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=98.49 E-value=2.7e-05 Score=84.99 Aligned_cols=143 Identities=14% Similarity=0.111 Sum_probs=83.8
Q ss_pred HHHHHHHHHc------CCCCCcEEEeccCc-hHHHHHHHHHH-----cCCEEEE-EeccCCc------------------
Q 007454 174 AMKKRIMDFL------NISENDYVYDYESE-AVEAMIRTSEK-----RGARVMS-AEFSWPR------------------ 222 (603)
Q Consensus 174 ~aR~~Ia~~l------na~~~e~vf~~es~-sV~~~~~~a~~-----~Ga~V~~-~~~~~~~------------------ 222 (603)
+.|+.|++++ ++++++++.+..+. ++..+...... .|.+|.. ....++.
T Consensus 78 ~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~ 157 (416)
T PRK09440 78 ELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNI 157 (416)
T ss_pred HHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeeccccc
Confidence 6788888877 47888988877653 44444444432 3556655 2222211
Q ss_pred ---------cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEeccccCCCCCCC
Q 007454 223 ---------LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILIDACALGPKDMDS 289 (603)
Q Consensus 223 ---------g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvDAaq~~~~~m~~ 289 (603)
..++.++|+ + ..+++++.++.-+|.||.+++.+. ++.|++++++|++|-+-.-...-..
T Consensus 158 ~~~~~~~~~~~~d~~~l~--~------~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~ 229 (416)
T PRK09440 158 ELLPEGQFKYHVDFEHLH--I------DEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGII 229 (416)
T ss_pred ccccccccccCCCHHHcc--c------CCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcc
Confidence 123444443 1 135788889888999999999763 3467899999999987532210000
Q ss_pred -CCCCC--CCCcEEEEcccccCCCCCCceEEEEEeCCCC
Q 007454 290 -FGLSL--VRPDFLICSFYQIFGENPSGFGCLFVKKSTV 325 (603)
Q Consensus 290 -ldls~--~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~ 325 (603)
.++.. .+-=+++.||-|+ +.+-.-+|.++..++++
T Consensus 230 ~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l~ 267 (416)
T PRK09440 230 FSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEII 267 (416)
T ss_pred hhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHHHH
Confidence 11111 1112667899996 64322377777655544
No 269
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.49 E-value=1.4e-05 Score=87.92 Aligned_cols=224 Identities=10% Similarity=0.076 Sum_probs=129.9
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-C---CCCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-P---KDMDSFGLSLVR 296 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~---~~m~~ldls~~~ 296 (603)
+.++|++.|.......+++..|.+--+....|.+.| ++.+ ++|+++|+++++|-+|.+ | + +...+.....
T Consensus 181 ~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~-~~~~~~~~v~ 259 (425)
T PRK09264 181 TLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGT-FFSFERAGIT 259 (425)
T ss_pred HHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccH-HHHHhhcCCC
Confidence 456778888642111124555555444446787654 3444 479999999999998742 1 1 1122323457
Q ss_pred CcEEEEcccccCCCCCCc--eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCC
Q 007454 297 PDFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATN 374 (603)
Q Consensus 297 ~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~ 374 (603)
||++++| |.+| +.| +|++++++++. .+.+...+++ + . .
T Consensus 260 PDi~t~~--K~l~--~~G~pigav~~~~~i~-~~~~~~~~~T----------~-----------------------~--g 299 (425)
T PRK09264 260 PDIVTLS--KSIS--GYGLPMALVLIKPELD-VWKPGEHNGT----------F-----------------------R--G 299 (425)
T ss_pred CCEEEec--cccC--CCccceEEEEEchhhh-ccCCCccCCC----------C-----------------------C--C
Confidence 9999887 9887 546 49999987752 2221111000 0 0 1
Q ss_pred ChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHh
Q 007454 375 TFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGL-DQVDSLGLTMISRRGRCLINWLVNALM 453 (603)
Q Consensus 375 n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al-d~~~~iGl~~i~~r~~~L~~~L~~~L~ 453 (603)
|..+.++. + +++ +.+. -+.+.++++.+.++|.++|.
T Consensus 300 np~~~aaa---------------~-------------------------a~l~~~~~---~~~l~~~~~~~g~~l~~~l~ 336 (425)
T PRK09264 300 NNLAFVTA---------------T-------------------------AALEEYWS---DDAFEKEVKAKGELVRERLE 336 (425)
T ss_pred CHHHHHHH---------------H-------------------------HHHHHHHh---hhHHHHHHHHHHHHHHHHHH
Confidence 21221111 0 355 3322 24677888889999998887
Q ss_pred cCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHh
Q 007454 454 KLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEK 533 (603)
Q Consensus 454 ~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~ 533 (603)
++.. ..|.+ + +.. ...|.++.+.+.+.. . ...+.+.+-++||.++.+
T Consensus 337 ~l~~----~~~~~-~-~~v--rg~Gl~~~i~l~~~~---~-~~~l~~~~~~~Gv~~~~~--------------------- 383 (425)
T PRK09264 337 EIAA----KYPGL-G-AEV--RGRGMMQGIDFGDGE---L-AGKIAAEAFENGLIIETS--------------------- 383 (425)
T ss_pred HHHH----hCCCc-e-ecc--eecccEEEEEecChH---H-HHHHHHHHHHCCCEEecc---------------------
Confidence 7631 01212 1 111 124677788775421 1 122344445678877531
Q ss_pred hhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 534 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
......||+++.+..|.+||+++++.|.+.+..
T Consensus 384 -----------------~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 384 -----------------GPEDEVVKLLPPLTIDEEELEEGLDILEEAVAE 416 (425)
T ss_pred -----------------CCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 011258999999999999999999999999876
No 270
>PRK15029 arginine decarboxylase; Provisional
Probab=98.47 E-value=7.2e-05 Score=87.15 Aligned_cols=152 Identities=14% Similarity=0.093 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEecc---------------------CchHHHHHHHHHHcCCEEEEEeccCCc----cc
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDYE---------------------SEAVEAMIRTSEKRGARVMSAEFSWPR----LR 224 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~e---------------------s~sV~~~~~~a~~~Ga~V~~~~~~~~~----g~ 224 (603)
..+.+|.+..|+++|++..=|+-.=. -|++.++...+.-.|++.+++...+.. +.
T Consensus 205 G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~ 284 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGP 284 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccC
Confidence 57789999999999996544422111 122333333445568888888765422 23
Q ss_pred cC-----HHHHHHHHhhcCC----CCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccC--C-CCCCC--
Q 007454 225 IN-----SEKLRKMVVSKGK----KKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALG--P-KDMDS-- 289 (603)
Q Consensus 225 i~-----~~~L~~~l~~~~~----~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~--~-~~m~~-- 289 (603)
|+ .+.+++.|..... ..++.+.++++.- +--|+.++++.| ..||++|..+|||.|..+ + +...|
T Consensus 285 i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~ 363 (755)
T PRK15029 285 IYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADH 363 (755)
T ss_pred CCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHhcCCeEEEECccccccccCcccccc
Confidence 44 8899999864221 1123446666654 458999999965 589999999999986433 1 10011
Q ss_pred CCC-----CCCCCc-EEEEcccccCCCCCCceEEEEEeCC
Q 007454 290 FGL-----SLVRPD-FLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 290 ldl-----s~~~~D-flv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
--+ ...++| +++-|.||..+. -+....|-++.+
T Consensus 364 sa~~~~~~~~~Gad~~vvqStHKtL~a-lTQaS~LHv~~~ 402 (755)
T PRK15029 364 YAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREG 402 (755)
T ss_pred ccccccccccCCCceEEEEchhhcccc-hhhhhhheeCCC
Confidence 011 225799 999999999886 777777777543
No 271
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=98.46 E-value=8.5e-05 Score=81.46 Aligned_cols=186 Identities=16% Similarity=0.187 Sum_probs=107.1
Q ss_pred CCceeeecCCC------CCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchHHHHHHHHHHHHH
Q 007454 107 SNHTCLDYFGI------GLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQESGLESAMKKRIM 180 (603)
Q Consensus 107 ~~~vYLDyaa~------tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~~~~~~~aR~~Ia 180 (603)
.+..|||..+. |.-++.+++++.+.+... . . ++ .......+.+++|+
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~---------------------~---~--~~-~~~~~~~~lae~l~ 98 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG---------------------T---S--YG-APTEAEILLAKEII 98 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhC---------------------C---c--CC-CCCHHHHHHHHHHH
Confidence 57889997654 355688888877643211 0 0 00 01133457888888
Q ss_pred HHcCCCCCcEEEec-cCchHHHHHHHHHH--cCCEEEEEeccC-----------------------Cc---------cc-
Q 007454 181 DFLNISENDYVYDY-ESEAVEAMIRTSEK--RGARVMSAEFSW-----------------------PR---------LR- 224 (603)
Q Consensus 181 ~~lna~~~e~vf~~-es~sV~~~~~~a~~--~Ga~V~~~~~~~-----------------------~~---------g~- 224 (603)
+++... +++.|.. -++++...++.++. ..-+|....-.+ +. -.
T Consensus 99 ~~~~~~-~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (423)
T TIGR00713 99 SRVPSV-EMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVL 177 (423)
T ss_pred HhCCcc-cEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEe
Confidence 887543 4565543 24556555555442 122332211000 00 00
Q ss_pred --cCHHHHHHHHhhcCCCCCCeeEEEE-eCcccccccccc----HHHH-HHHHhCCcEEEEeccccCCCC--CCCCCCCC
Q 007454 225 --INSEKLRKMVVSKGKKKKQRGLFVF-PLHSRMTGARYP----YLWM-RIAQENDWHILIDACALGPKD--MDSFGLSL 294 (603)
Q Consensus 225 --i~~~~L~~~l~~~~~~~~~t~Lv~~-~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~~~~--m~~ldls~ 294 (603)
-+.++|++.|... .++++.|.+ |.++| +|.+.| ++.+ ++|+++|+++++|=++.+-.. +.......
T Consensus 178 ~~~d~~~l~~~i~~~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~ 253 (423)
T TIGR00713 178 PYNDLEALEEVFEEY---GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFG 253 (423)
T ss_pred CCCCHHHHHHHHHHc---CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhC
Confidence 1678888888631 134555555 78888 899888 3444 478999999999988743210 01111123
Q ss_pred CCCcEEEEcccccCCCCCCc--eEEEEEeCCCCcCcC
Q 007454 295 VRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 295 ~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~ 329 (603)
..||.+ ++=|.+|. | +|+++.++++++.+.
T Consensus 254 ~~pDi~--t~sK~l~~---G~pig~v~~~~~i~~~~~ 285 (423)
T TIGR00713 254 VEPDLT--TLGKIIGG---GLPVGAFGGRREIMERLA 285 (423)
T ss_pred CCcchh--hhhhhhcC---CCceeeeeEHHHHHHhhC
Confidence 458854 57898872 5 799999888776554
No 272
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.44 E-value=0.0002 Score=77.00 Aligned_cols=268 Identities=15% Similarity=0.180 Sum_probs=161.7
Q ss_pred HHHHHHHHHcCCCCCcEEEeccC--chHHHHHHHHHHcCC-----EEEEEe------------ccCCc-----------c
Q 007454 174 AMKKRIMDFLNISENDYVYDYES--EAVEAMIRTSEKRGA-----RVMSAE------------FSWPR-----------L 223 (603)
Q Consensus 174 ~aR~~Ia~~lna~~~e~vf~~es--~sV~~~~~~a~~~Ga-----~V~~~~------------~~~~~-----------g 223 (603)
+.-+++.+..+ ..+.+|-.+| +++...+..|++.+. ++.... +.|.. +
T Consensus 88 ~la~~L~~~s~--~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g 165 (404)
T COG4992 88 ELAEKLVELSP--FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPG 165 (404)
T ss_pred HHHHHHHhhCc--cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCC
Confidence 33344444444 2566665554 577777777776554 444332 11100 0
Q ss_pred c-----cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH-HH---H-HHHhCCcEEEEeccccCC-CC--CCCC
Q 007454 224 R-----INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WM---R-IAQENDWHILIDACALGP-KD--MDSF 290 (603)
Q Consensus 224 ~-----i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~-~i---~-~a~e~g~~vlvDAaq~~~-~~--m~~l 290 (603)
. =|.+.|+++|.+ +|.-|.+=-..-+-|++.|-. .+ + +|+++|+++++|=+|.+- .. |--.
T Consensus 166 ~~~vpfnDi~al~~ai~~------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~ 239 (404)
T COG4992 166 FRHVPFNDIEALEAAIDE------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAY 239 (404)
T ss_pred ceecCCCCHHHHHHHhcc------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHH
Confidence 0 178899999975 688777777778999988864 33 2 588999999999998773 11 1111
Q ss_pred CCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccc
Q 007454 291 GLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKV 370 (603)
Q Consensus 291 dls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e 370 (603)
.-....||.++.. |-+|+ --=+|+.+.++.....++|-..|.+ +
T Consensus 240 e~~gV~PDI~tla--K~LgG-G~PigA~la~~~~~~~~~~G~HgST----------f----------------------- 283 (404)
T COG4992 240 EHYGVEPDILTLA--KALGG-GFPIGAMLATEEIASAFTPGDHGST----------F----------------------- 283 (404)
T ss_pred HHhCCCCCEEEee--ccccC-CccceeeEEchhhhhcCCCCcccCC----------C-----------------------
Confidence 1223469988764 75432 1228999998665555554322211 0
Q ss_pred cCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 007454 371 AATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVN 450 (603)
Q Consensus 371 ~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~ 450 (603)
.| | +++.++ . .++|+.+.+ +.+-++++.+.++|.+
T Consensus 284 GG--N---pLacAv-------------~------------------------~a~l~~l~~---e~ll~~v~~~g~~~~~ 318 (404)
T COG4992 284 GG--N---PLACAV-------------A------------------------LAVLEVLLE---EGLLENVREKGEYLLQ 318 (404)
T ss_pred Cc--C---HHHHHH-------------H------------------------HHHHHHHcc---hhHHHHHHHHHHHHHH
Confidence 01 1 122220 0 146666554 5667788999999999
Q ss_pred HHhcCCCCCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHH
Q 007454 451 ALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDN 529 (603)
Q Consensus 451 ~L~~L~h~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~ 529 (603)
+|.+|.++. |+| .|- -+|=++..-+.... ..+..+ +.+..+|+-+-.
T Consensus 319 ~L~~l~~~~----~~v~~vR------G~GLmiGiel~~~~---~a~~~~-~~~~~~gvL~~~------------------ 366 (404)
T COG4992 319 RLRELKRRY----PLVKEVR------GRGLMIGIELKEPY---RARDIV-RALREEGVLVLP------------------ 366 (404)
T ss_pred HHHHHhhcC----Cceeeee------cceeEEEEEecCcc---cHHHHH-HHHHHCCeEEec------------------
Confidence 999986532 322 222 24667777776532 123334 444455654310
Q ss_pred HHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhh
Q 007454 530 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
.+..+||+.+...-+.|||+..++.+++.+...
T Consensus 367 ----------------------a~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 367 ----------------------AGPNVIRFLPPLVITEEEIDEALDALERALAAA 399 (404)
T ss_pred ----------------------CCCCeEEecCCccCCHHHHHHHHHHHHHHHHHh
Confidence 112499999999999999999999999988753
No 273
>PRK06541 hypothetical protein; Provisional
Probab=98.44 E-value=0.00023 Score=79.21 Aligned_cols=228 Identities=13% Similarity=0.083 Sum_probs=131.4
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCCCCC---CCCCCCCCc
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKDMDS---FGLSLVRPD 298 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~m~~---ldls~~~~D 298 (603)
+.|++.+... ..+.+..|.+--+.+..|.+.| ++.+ ++|+++|+++++|=++. +|.. .. ...-...||
T Consensus 208 ~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~-G~~~a~~~~gv~PD 284 (460)
T PRK06541 208 DRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRL-GEMFGCERFGYVPD 284 (460)
T ss_pred HHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC-chhhhhhhcCCCCC
Confidence 5677777521 1135666666667778999988 6655 47999999999998762 3321 11 111123699
Q ss_pred EEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhh
Q 007454 299 FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 378 (603)
Q Consensus 299 flv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~g 378 (603)
+++ +=|.+|..=.-+|+++.+++.++.+.+.. +.. +-.+|..- .
T Consensus 285 ivt--~gK~l~~G~~pigav~~~~~i~~~~~~~~--~~~-------------------------------~~~~T~~g-n 328 (460)
T PRK06541 285 IIT--CAKGITSGYSPLGAMIASDRLFEPFLDGP--TMF-------------------------------LHGYTFGG-H 328 (460)
T ss_pred EEE--ecccccCCccceeEEEEcHHHHHHhhcCC--Ccc-------------------------------ccCCCCCC-C
Confidence 886 46866620001799999888765443211 000 00112110 0
Q ss_pred hhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 007454 379 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHP 458 (603)
Q Consensus 379 i~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~ 458 (603)
+++++ +++ +.++.+.. +.+.++++.+.++|.++|.++..
T Consensus 329 p~~~a------------aal-------------------------a~l~~l~~---~~~~~~~~~~g~~l~~~L~~l~~- 367 (460)
T PRK06541 329 PVSAA------------VAL-------------------------ANLDIFER---EGLLDHVRDNEPAFRATLEKLLD- 367 (460)
T ss_pred HHHHH------------HHH-------------------------HHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhc-
Confidence 11111 011 35565543 34567888999999999988731
Q ss_pred CCCCCceE-EEeCCCCCCCCCCEEEEEEccCCC--CccC--------HHHHHHHHhcCCcEEeeCcccCccCCchhhhhh
Q 007454 459 NTEGNALV-KIYGPKIRFDRGPALAFNVFDWKR--EKIE--------PVLVQKLADRENISLSYGSLHHIWFSDKYQKEK 527 (603)
Q Consensus 459 ~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g--~~v~--------~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~ 527 (603)
.|.| .+.| .|.++.+.+.+... +... ...+.+.+-++||.++..
T Consensus 368 ----~~~v~~vrg------~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------------- 422 (460)
T PRK06541 368 ----LPIVGDVRG------DGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRAD--------------- 422 (460)
T ss_pred ----CCCeEEEEe------cceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEec---------------
Confidence 2322 2222 46777777743211 1110 012333344578776531
Q ss_pred HHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 528 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 528 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
..+..+||+++.+..|.+||+++++.|.+.+.+
T Consensus 423 -----------------------~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 423 -----------------------DRGDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred -----------------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 011248999999999999999999999998864
No 274
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.42 E-value=8.6e-05 Score=78.95 Aligned_cols=317 Identities=13% Similarity=0.098 Sum_probs=184.0
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccch--HHHHHHHHHHHHHHHcCCCCCcEEE
Q 007454 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQ--ESGLESAMKKRIMDFLNISENDYVY 192 (603)
Q Consensus 115 aa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~--~~~~~~~aR~~Ia~~lna~~~e~vf 192 (603)
|+=...|+.|++++-..+++- |.-+-|.... ||+- ...+++-+.++..++||++-.++
T Consensus 33 ASEN~~S~aV~~A~gS~ltnK-----------------YAEGyPgkRy-YgGce~VD~vE~laierak~LFga~~anV-- 92 (413)
T COG0112 33 ASENFTSPAVMEAQGSDLTNK-----------------YAEGYPGKRY-YGGCEYVDEVEELAIERAKKLFGAEYANV-- 92 (413)
T ss_pred eccccCCHHHHHHHhhhhhhc-----------------cccCCCCccc-cCCCeeHHHHHHHHHHHHHHHhCCCcccc--
Confidence 444567999999976654421 1224444443 3432 47788889999999999974444
Q ss_pred eccCc--hHHHHHHHHHHcC--------------------------CEEEEEeccCCccccCHHHHHHHHhhcCCCCCCe
Q 007454 193 DYESE--AVEAMIRTSEKRG--------------------------ARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQR 244 (603)
Q Consensus 193 ~~es~--sV~~~~~~a~~~G--------------------------a~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t 244 (603)
...|. +-..+..+.-+.| +++..-+++..++.||.+++++++... ++
T Consensus 93 QPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~-----kP 167 (413)
T COG0112 93 QPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEV-----KP 167 (413)
T ss_pred CCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHh-----CC
Confidence 11111 1111111111122 344455666567899999999998753 45
Q ss_pred eEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCC-----CCCCCCCCCCCCcEEEEcccccCCCCCCceEEE
Q 007454 245 GLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPK-----DMDSFGLSLVRPDFLICSFYQIFGENPSGFGCL 318 (603)
Q Consensus 245 ~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~-----~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L 318 (603)
+|+++-.-. -=..+|++.++ +|.+.|+++++|++..+|- ...||. .+|+++.|-||-|.+ |.| |++
T Consensus 168 K~ii~G~Sa--Y~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~----~AdvVTtTTHKTlrG-PrG-G~I 239 (413)
T COG0112 168 KLIIAGGSA--YSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP----HADVVTTTTHKTLRG-PRG-GII 239 (413)
T ss_pred CEEEECccc--cccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC----ccceEeCCcccCCCC-CCc-eEE
Confidence 666554321 12367787775 7899999999999765432 112443 289999999997655 874 555
Q ss_pred EEeC-CCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHH
Q 007454 319 FVKK-STVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISE 397 (603)
Q Consensus 319 ~vkk-~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~ 397 (603)
+.++ ++...+....|.|.+ |-|...-|+|.+
T Consensus 240 l~~~eel~kkin~aVFPg~q----------------------------------ggpl~HviAaka-------------- 271 (413)
T COG0112 240 LTNDEELAKKINSAVFPGLQ----------------------------------GGPLMHVIAAKA-------------- 271 (413)
T ss_pred EeccHHHHHHhhhhcCCccC----------------------------------CChHHHHHHHHH--------------
Confidence 5554 555556544443331 122233344443
Q ss_pred HhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCC
Q 007454 398 VRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDR 477 (603)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~r 477 (603)
-|+....+-++..-.+++..-+..|.+.|.+. | ++|.+- ...
T Consensus 272 --------------------------Va~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~------G---~~vvsG---gTd 313 (413)
T COG0112 272 --------------------------VAFKEALEPEFKEYAKQVVKNAKALAEALKER------G---FKVVSG---GTD 313 (413)
T ss_pred --------------------------HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc------C---CeEecC---Ccc
Confidence 24443334466666666666677777777764 4 344432 223
Q ss_pred CCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEE
Q 007454 478 GPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVV 557 (603)
Q Consensus 478 g~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~V 557 (603)
...|...+.+. | +.-..+.+++++.||.+---. .+ .|+. ...-.+.|
T Consensus 314 nHl~lVDl~~~-~--~~Gk~ae~~L~~~~It~NKN~---iP-~D~~--------------------------~p~~tSGI 360 (413)
T COG0112 314 NHLVLVDLRSK-G--LTGKKAEAALERAGITVNKNA---IP-FDPE--------------------------SPFVTSGI 360 (413)
T ss_pred ceEEEEEcccC-C--CCHHHHHHHHHHcCEeeccCC---CC-CCCC--------------------------CCCCCccc
Confidence 55777777622 1 333468889999999763110 00 0000 01112457
Q ss_pred EEecCCCCC----HHHHHHHHHHHHHHHhh
Q 007454 558 TASLGYLAN----FEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 558 R~Slg~~tt----~eDVd~l~~~l~~~l~~ 583 (603)
|+..--.|| ++|...+.++|.+.|+.
T Consensus 361 RiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 361 RIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred eeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 776665553 67888888888887765
No 275
>PRK05839 hypothetical protein; Provisional
Probab=98.42 E-value=2.6e-05 Score=84.19 Aligned_cols=113 Identities=12% Similarity=0.119 Sum_probs=68.6
Q ss_pred HHHHcCCEEEEEeccCC-ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEec
Q 007454 205 TSEKRGARVMSAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDA 279 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~-~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDA 279 (603)
.++..|++|..++.+.. ...++..+. .+ ++++++.++.-+|.||..+|.+.+ +.|+++|+++++|-
T Consensus 125 ~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~-------~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE 195 (374)
T PRK05839 125 AAIASRAKVLLMPLTKENDFTPSLNEK--EL-------QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDE 195 (374)
T ss_pred HHHhcCCEEEEeecccccCCcCCcchh--hh-------ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEecc
Confidence 34556888888877521 223333222 22 147898888889999999998743 35789999999997
Q ss_pred cc--cCCC-CCCC-CCC------CCCCCcEEEEcccccCCCCCCceEEEEEeCCCCc
Q 007454 280 CA--LGPK-DMDS-FGL------SLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVP 326 (603)
Q Consensus 280 aq--~~~~-~m~~-ldl------s~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~ 326 (603)
+- +... ...+ +++ ....-=+++.|+=|.||.+---+|.++..+++++
T Consensus 196 ~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~ 252 (374)
T PRK05839 196 CYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASILK 252 (374)
T ss_pred chhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHHHH
Confidence 52 1110 0001 111 1111227789999998853223788887655443
No 276
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.41 E-value=2.9e-05 Score=84.62 Aligned_cols=111 Identities=18% Similarity=0.235 Sum_probs=77.7
Q ss_pred HHHcCCEEEEEeccCC--ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEec
Q 007454 206 SEKRGARVMSAEFSWP--RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDA 279 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~--~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDA 279 (603)
.+-.|+++..++++.. +..++.++|++.+.. +|+++++..=+|.||.+++-+.+ +.|+++|++++.|-
T Consensus 130 ~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~------ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DE 203 (393)
T COG0436 130 VKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP------KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDE 203 (393)
T ss_pred HHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeh
Confidence 3446899999986432 568899999999974 69999999999999999997643 46899999999997
Q ss_pred c--ccC--CC-CCCCCCCCCC-CCcEEEEcccccCCCCCCc--eEEEEEe-CCC
Q 007454 280 C--ALG--PK-DMDSFGLSLV-RPDFLICSFYQIFGENPSG--FGCLFVK-KST 324 (603)
Q Consensus 280 a--q~~--~~-~m~~ldls~~-~~Dflv~S~hK~fG~~P~G--~G~L~vk-k~~ 324 (603)
+ .+. +. ....+.+... ..=+.+-|+=|.|+ -+| +|.++.. +.+
T Consensus 204 iY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~--mtGwRvG~~v~~~~~l 255 (393)
T COG0436 204 IYEELVYDGAEHPSILELAGARDRTITINSFSKTYG--MTGWRIGWVVGPPEEL 255 (393)
T ss_pred hhhhcccCCCCcCCHhhcCCCcceEEEEeccccccc--ccccceeEeecChHHH
Confidence 5 222 21 0011222211 12345559999998 446 8888877 444
No 277
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=98.41 E-value=3.3e-05 Score=84.16 Aligned_cols=82 Identities=17% Similarity=0.069 Sum_probs=54.5
Q ss_pred CeeEEEEeCccccccccccHH----HHHHHHhCCcEEEEecccc--CCCCCCCCCCCCC----CCcEEEEcccccCCCCC
Q 007454 243 QRGLFVFPLHSRMTGARYPYL----WMRIAQENDWHILIDACAL--GPKDMDSFGLSLV----RPDFLICSFYQIFGENP 312 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~~vlvDAaq~--~~~~m~~ldls~~----~~Dflv~S~hK~fG~~P 312 (603)
+++++.++.-+|.||..+|.+ ++..|+++++++++|-+-. ...+..+..+..+ ..-+++.|+=|.||.|-
T Consensus 173 ~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pG 252 (402)
T TIGR03542 173 KIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTG 252 (402)
T ss_pred CceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCC
Confidence 578888889999999999964 2346789999999998632 1110012222221 12356789999998532
Q ss_pred CceEEEEEeCCC
Q 007454 313 SGFGCLFVKKST 324 (603)
Q Consensus 313 ~G~G~L~vkk~~ 324 (603)
..+|.+++.+..
T Consensus 253 lRiG~~i~~~~l 264 (402)
T TIGR03542 253 VRLGWTVVPKEL 264 (402)
T ss_pred cceEEEEecHHH
Confidence 237888886654
No 278
>PRK07036 hypothetical protein; Provisional
Probab=98.39 E-value=0.00046 Score=76.98 Aligned_cols=94 Identities=16% Similarity=0.284 Sum_probs=59.0
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHHH-HHHhCCcEEEEeccccC-CCCCCC-CCCC---CCCC
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWMR-IAQENDWHILIDACALG-PKDMDS-FGLS---LVRP 297 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i~-~a~e~g~~vlvDAaq~~-~~~m~~-ldls---~~~~ 297 (603)
+.+++.|... ...+...|.+--+....|.+.| ++.+. +|+++|+++++|=+|.+ |.. .. +..+ ...|
T Consensus 207 ~~~~~~i~~~--~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt-G~~~~~~~~~gv~P 283 (466)
T PRK07036 207 DEFEDKILSL--GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRL-GHFFASEAVFGIQP 283 (466)
T ss_pred HHHHHHHHHc--CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcC-chhhhhhhhcCCCC
Confidence 3455555421 1235655555555666798887 55554 79999999999987743 331 11 2222 3469
Q ss_pred cEEEEcccccCCCCCCc---eEEEEEeCCCCcCcC
Q 007454 298 DFLICSFYQIFGENPSG---FGCLFVKKSTVPILV 329 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G---~G~L~vkk~~~~~L~ 329 (603)
|+++++ |-+|+ | +|++++++++++.+.
T Consensus 284 Divt~g--K~l~g---G~~Pi~av~~~~~i~~~~~ 313 (466)
T PRK07036 284 DIITFA--KGLTS---GYQPLGAVIISERLLDVIS 313 (466)
T ss_pred CEEEEc--ccccc---CccccEEEEEcHHHHHHHh
Confidence 988774 75552 3 799999998876554
No 279
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.39 E-value=4.6e-05 Score=82.25 Aligned_cols=148 Identities=17% Similarity=0.152 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCcE--EEeccCch-----------------------------HHHHHHHHHHcCCEEEEEe
Q 007454 169 SGLESAMKKRIMDFLNISENDY--VYDYESEA-----------------------------VEAMIRTSEKRGARVMSAE 217 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~--vf~~es~s-----------------------------V~~~~~~a~~~Ga~V~~~~ 217 (603)
..+..++=.-++.+||++++++ .+.=.|++ ...+-.+++..+.+++.++
T Consensus 119 ~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~ 198 (491)
T KOG1383|consen 119 RKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVP 198 (491)
T ss_pred HHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeee
Confidence 4566777788899999997754 11101111 1122234445677888899
Q ss_pred ccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHh-CCcEEEEeccccC---C---CCCCC
Q 007454 218 FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQE-NDWHILIDACALG---P---KDMDS 289 (603)
Q Consensus 218 ~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e-~g~~vlvDAaq~~---~---~~m~~ 289 (603)
++..+-++|..++.+.+++ +|.+++..+-+-.+|..=|++.+ .++.+ .++.+|+|||.-+ | ..+.+
T Consensus 199 ~~~~~~~~D~~k~~~~i~e------Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~ 272 (491)
T KOG1383|consen 199 LDEGDYRVDPGKVVRMIDE------NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEE 272 (491)
T ss_pred ccccceEecHHHHHHHhcc------ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccc
Confidence 8866778999999999975 89999999999999999999966 47777 9999999997321 1 12236
Q ss_pred CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 007454 290 FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 290 ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
+|+..-++--+.+++||..-. |.|+|..+-|..
T Consensus 273 fdFr~p~V~Sisa~~HKYGl~-~~G~~~vl~r~k 305 (491)
T KOG1383|consen 273 FDFRVPGVTSISADGHKYGLA-PAGSSWVLYRNK 305 (491)
T ss_pred cccCCCCceeEeeccceeeee-ecCcEEEEEccc
Confidence 777777888899999995333 999997666544
No 280
>PLN02231 alanine transaminase
Probab=98.38 E-value=0.0001 Score=83.40 Aligned_cols=108 Identities=14% Similarity=0.122 Sum_probs=74.5
Q ss_pred HHHHHHHHHHc----C--CCCCcEEEeccCc-hHHHHH----------------------HHHHHcCCEEEEEeccCC-c
Q 007454 173 SAMKKRIMDFL----N--ISENDYVYDYESE-AVEAMI----------------------RTSEKRGARVMSAEFSWP-R 222 (603)
Q Consensus 173 ~~aR~~Ia~~l----n--a~~~e~vf~~es~-sV~~~~----------------------~~a~~~Ga~V~~~~~~~~-~ 222 (603)
...|+.|++++ | +++++++.+..+. ++..+. ..++..|++++.++++.. +
T Consensus 171 ~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~ 250 (534)
T PLN02231 171 KGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATG 250 (534)
T ss_pred HHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccC
Confidence 47888888877 3 5678887664332 222222 223456788888877632 2
Q ss_pred cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEecc
Q 007454 223 LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDAC 280 (603)
Q Consensus 223 g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAa 280 (603)
..++.++|++.+...+....+++++++.--+|.||.+++.+.+ ..|+++|++++.|-+
T Consensus 251 ~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEv 312 (534)
T PLN02231 251 WGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEV 312 (534)
T ss_pred CCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 3789999999987422222257887888779999999998743 457899999999975
No 281
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.37 E-value=5.3e-05 Score=81.60 Aligned_cols=289 Identities=15% Similarity=0.126 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHcCCCCCcE----------EEeccCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCC
Q 007454 172 ESAMKKRIMDFLNISENDY----------VYDYESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKK 241 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~----------vf~~es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~ 241 (603)
+=+||.+..+-++-.+.+| +|.. .++...+-+.+.-.|.+.+.++.+. +-.+..+.|+++|..+..+.
T Consensus 156 llaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~S-Dqahssveka~~i~~VklR~l~td~-n~~mr~~~L~~AIe~D~arG 233 (511)
T KOG0628|consen 156 LLAARTEKIEEIKSRPPELHESSVLARLVAYCS-DQAHSSVEKACLIAGVKLRALPTDE-NFGMRGDTLRKAIEEDIARG 233 (511)
T ss_pred HHHHHHHHHHHhhcCCCcccchhhhhhheEEec-CcccchHHHhHhhcceeEEEeeccc-CcCCCHHHHHHHHHHHHhCC
Confidence 3467777777777665444 3421 1233334445555688999999884 77889999999998643221
Q ss_pred CCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCCCCCCCCCC--------CCCcEEEEcccccCCCCC
Q 007454 242 KQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKDMDSFGLSL--------VRPDFLICSFYQIFGENP 312 (603)
Q Consensus 242 ~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~m~~ldls~--------~~~Dflv~S~hK~fG~~P 312 (603)
--+-.++.+.-+--+=..=++..+. .|+++|+++|||||-++.- +-..+ -.+|-+-+..|||+-- =
T Consensus 234 lIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa----~iCpE~r~l~rGie~aDSfn~n~hK~~~v-n 308 (511)
T KOG0628|consen 234 LIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSA----FICPEFRYLMRGIEYADSFNFNPHKWLLV-N 308 (511)
T ss_pred CccEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhcccc----ccCHHHHHHhhcchhhccccCChhheeEE-e
Confidence 1112223333222222344566664 8999999999999744321 11111 2479999999999753 2
Q ss_pred CceEEEEEeCCCC--c--CcCCCCCCCce-eccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhc
Q 007454 313 SGFGCLFVKKSTV--P--ILVDNTSSGMV-SLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQS 387 (603)
Q Consensus 313 ~G~G~L~vkk~~~--~--~L~p~~~gG~v-~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~ 387 (603)
.-.-+||+|+... . ...|.+.-+.. ...+.++. |. +.. -++
T Consensus 309 fDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrh-wq--------ipl----~rR--------------------- 354 (511)
T KOG0628|consen 309 FDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRH-WQ--------IPL----GRR--------------------- 354 (511)
T ss_pred eeeecceeecCceeeeeeecChHhhcchhhccCCCccc-cc--------ccc----ccc---------------------
Confidence 3466799998742 0 11222221100 00111110 10 000 011
Q ss_pred CccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCc
Q 007454 388 GKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQ---VDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNA 464 (603)
Q Consensus 388 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~---~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~p 464 (603)
+ ++|+. +...|.+++++|+|.-.+ |-+...+|-+ +.+
T Consensus 355 ----------f-------------------------RSLKlWfv~R~~Gve~lq~~iR~h~~-La~~fe~lv~----~d~ 394 (511)
T KOG0628|consen 355 ----------F-------------------------RSLKLWFVLRSYGVENLQNYIREHVR-LAKEFETLVR----ADP 394 (511)
T ss_pred ----------h-------------------------hhHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHhh----cCC
Confidence 0 35553 344689999999886443 2222333322 234
Q ss_pred eEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccccccc
Q 007454 465 LVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDN 544 (603)
Q Consensus 465 lv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 544 (603)
..+|..|. .-+.|.|.+++.+ .++..+++++.+...|++..-.+
T Consensus 395 ~FE~~~~~----~lgLvcFRlk~~N--~~ne~Ll~~in~~g~i~l~~~~l------------------------------ 438 (511)
T KOG0628|consen 395 RFEIVNKR----ILGLVCFRLKGDN--EINEALLNRLNSSGRIHLVPASL------------------------------ 438 (511)
T ss_pred cceeeccc----ccceeEEeecCCc--HHHHHHHHHHHhcCcEEEEEeee------------------------------
Confidence 46776654 4679999999974 35667788887777887753211
Q ss_pred ccccCCCCCCCEEEEecC-CCCCHHHHHHHHHHHHHHHhhh
Q 007454 545 NRKDKANLGITVVTASLG-YLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 545 ~~~~~~~~~~g~VR~Slg-~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
.+.-++|+..+ ..+|.+||+.-|+.|.+..+.-
T Consensus 439 -------~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 439 -------HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred -------cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 11137887776 4689999999999999887763
No 282
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.33 E-value=9.1e-05 Score=81.96 Aligned_cols=206 Identities=11% Similarity=0.149 Sum_probs=123.2
Q ss_pred CeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCCCCC-CCCC--CCCCcEEEEcccccCCCCCC
Q 007454 243 QRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKDMDS-FGLS--LVRPDFLICSFYQIFGENPS 313 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~m~~-ldls--~~~~Dflv~S~hK~fG~~P~ 313 (603)
+...|.+-.+....|.+.| ++.+ ++|+++|+.+++|=++. .+.. .. +... ...||++++| |-+|. -.
T Consensus 221 ~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~-G~~~a~~~~gv~pDivt~~--K~l~~-G~ 296 (441)
T PRK05769 221 EVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRT-GKMFAIEHFGVEPDIITLA--KAIAG-GL 296 (441)
T ss_pred ceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc-cceehhhccCCCCCEEEEc--ccccC-Cc
Confidence 5677777666667899999 7755 47999999999998766 2221 11 1111 2468999876 86653 12
Q ss_pred ceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccc
Q 007454 314 GFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQG 393 (603)
Q Consensus 314 G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~ 393 (603)
.+|+++.+++++..+ +...+++ + .| .+...++++
T Consensus 297 p~gav~~~~~i~~~~-~~~~~~T--------------------------------~-~g-~p~~~aaa~----------- 330 (441)
T PRK05769 297 PLGAVIGRAELMFLP-PGSHANT--------------------------------F-GG-NPVAAAAAL----------- 330 (441)
T ss_pred ccEEEEEehhhhhcC-CCCCCCC--------------------------------C-Cc-CHHHHHHHH-----------
Confidence 389999998876322 1111110 0 11 111111111
Q ss_pred hhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceE-EEeCCC
Q 007454 394 EISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPK 472 (603)
Q Consensus 394 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv-~Iygp~ 472 (603)
++|+.+++ .+.++++.+.++|.++|.++... .|++ .+-
T Consensus 331 ------------------------------a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~----~~~~~~vr--- 369 (441)
T PRK05769 331 ------------------------------ATLEELEE----GLLENAQKLGEYLRKELKELKEK----YEFIGDVR--- 369 (441)
T ss_pred ------------------------------HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHh----CCCeeeee---
Confidence 46776654 55678888889999998876410 1222 221
Q ss_pred CCCCCCCEEEEEEccCCCCc---cCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccC
Q 007454 473 IRFDRGPALAFNVFDWKREK---IEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDK 549 (603)
Q Consensus 473 ~~~~rg~ivsFnv~~~~g~~---v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 549 (603)
.+|.++.+.+.+...+. +.. .+.+.+-++||.+..
T Consensus 370 ---g~G~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~Gil~~~-------------------------------------- 407 (441)
T PRK05769 370 ---GLGLMIGVELVKDRKEPDPKLRD-KVLYEAFKRGLLLLG-------------------------------------- 407 (441)
T ss_pred ---cceEEEEEEeccCCccccHHHHH-HHHHHHHhCCcEEec--------------------------------------
Confidence 35667777774421111 111 222333356776531
Q ss_pred CCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 550 ANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 550 ~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
.+..++|+++.+..|.+||+++++.+.+.+++
T Consensus 408 --~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 408 --AGKSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred --CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 11248999999999999999999999988754
No 283
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.32 E-value=0.00027 Score=77.96 Aligned_cols=226 Identities=9% Similarity=0.047 Sum_probs=128.0
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
+.++|++++.... ...++..|.+--+....|.+.| ++.+ ++|+++|+++++|=++.+ +.. +....--...|
T Consensus 191 ~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~p 269 (433)
T PRK08117 191 CLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVP 269 (433)
T ss_pred HHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCC
Confidence 3455666664210 1134666666556667899988 7755 589999999999987653 111 00011112357
Q ss_pred cEEEEcccccCCCCCCc--eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCC
Q 007454 298 DFLICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 375 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n 375 (603)
|++ ++=|.+|. | +|++..++++++.+.....+++ + . .|
T Consensus 270 Di~--t~sK~lg~---G~pigav~~~~~i~~~~~~~~~~~T--------------------------------~-~--~n 309 (433)
T PRK08117 270 DIM--TIAKGIAS---GLPLSAVVASKELMEQWPLGSHGTT--------------------------------F-G--GN 309 (433)
T ss_pred CEe--ehhhhccC---CCcceeEEEcHHHHhhccCCCCCCC--------------------------------C-C--cC
Confidence 874 66798772 4 7888888877654432111110 0 0 11
Q ss_pred hhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC
Q 007454 376 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 455 (603)
Q Consensus 376 ~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L 455 (603)
..+.++.. ++|+.++. +.+.++++.+.++|.++|.++
T Consensus 310 p~~~aaa~----------------------------------------a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l 346 (433)
T PRK08117 310 PVACAAAL----------------------------------------ATLEVIKE---EKLLDNANEMGAYALERLEVL 346 (433)
T ss_pred HHHHHHHH----------------------------------------HHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 11111111 46665543 345677888888888888876
Q ss_pred CCCCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCCCc--cCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHH
Q 007454 456 QHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREK--IEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLE 532 (603)
Q Consensus 456 ~h~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g~~--v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~ 532 (603)
... .+.+ .+ ..+|-++.+.+.+.+++. .....+.+.+.++||.+...
T Consensus 347 ~~~----~~~~~~v------rg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------------- 396 (433)
T PRK08117 347 KEK----HPVIGDV------RGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLC-------------------- 396 (433)
T ss_pred Hhc----CCceeee------ecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeec--------------------
Confidence 310 1211 11 124556666665433211 01122334444578766421
Q ss_pred hhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 533 KTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+ ....++|+++.+..|.+||+++++.|.+.++.
T Consensus 397 -----------------g-~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 397 -----------------G-NAGNVLRMIPPLTVTKEEIDEGLDILDEALTE 429 (433)
T ss_pred -----------------C-CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 0 01258999999999999999999999988754
No 284
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=98.30 E-value=0.00018 Score=80.10 Aligned_cols=125 Identities=18% Similarity=0.233 Sum_probs=88.7
Q ss_pred cCchHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHHHHHh
Q 007454 195 ESEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMRIAQE 270 (603)
Q Consensus 195 es~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e 270 (603)
|..+-..++..++..|+++.-+|.+ ..-++.++|++.+... +-..+++.|..+|.||..+|.+ .+++|++
T Consensus 185 E~PtY~~~~~~~~~~g~~~~~vp~d--~~G~~~e~le~~~~~~----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~ 258 (459)
T COG1167 185 EDPTYPGALQALEALGARVIPVPVD--EDGIDPEALEEALAQW----KPKAVYVTPTFQNPTGVTMSLERRKALLALAEK 258 (459)
T ss_pred cCCCcHHHHHHHHHcCCcEEecCCC--CCCCCHHHHHHHHhhc----CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHH
Confidence 4445556677788899999999998 3457899999998752 2457999999999999999996 3457899
Q ss_pred CCcEEEEecc----ccCCCCCCC---CCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCc
Q 007454 271 NDWHILIDAC----ALGPKDMDS---FGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPIL 328 (603)
Q Consensus 271 ~g~~vlvDAa----q~~~~~m~~---ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L 328 (603)
++++++=|-. .+-+. -+ ..+...+==+++.||=|++. |-..+|.+.+.+++++.+
T Consensus 259 ~~~~IIEDD~y~el~~~~~--p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~ 320 (459)
T COG1167 259 YDVLIIEDDYYGELRYDGP--PPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKL 320 (459)
T ss_pred cCCeEEeeCcchhhhcCCC--CCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCCHHHHHHH
Confidence 9999999874 11121 11 11222233489999999988 334577787776654433
No 285
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=98.30 E-value=0.00015 Score=77.32 Aligned_cols=135 Identities=13% Similarity=0.145 Sum_probs=78.6
Q ss_pred HHHHHHHHHHcCCCC-CcEEEeccCc-hHHHHH-------------------HHHHHcCCEEEEEeccCCccccCHHHHH
Q 007454 173 SAMKKRIMDFLNISE-NDYVYDYESE-AVEAMI-------------------RTSEKRGARVMSAEFSWPRLRINSEKLR 231 (603)
Q Consensus 173 ~~aR~~Ia~~lna~~-~e~vf~~es~-sV~~~~-------------------~~a~~~Ga~V~~~~~~~~~g~i~~~~L~ 231 (603)
.+.|+.|++++|+++ ++++.+..+. ++..+. ..++..|+++..++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~~~~~g~v~v~~P~y~~y~~~~~~~g~~~~~v~~~~----------- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPALLPRGRVGIAPLAYSEYAPAFARHGHRVVPLDEAA----------- 124 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHHhcCCCeEEEcCCCcHHHHHHHHHCCCEEEeecccc-----------
Confidence 578999999999974 7887765543 222221 12233444444433321
Q ss_pred HHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-H---HHhCCcEEEEecc--ccCCCCCCCC-CCCCCCCcEEEEcc
Q 007454 232 KMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-I---AQENDWHILIDAC--ALGPKDMDSF-GLSLVRPDFLICSF 304 (603)
Q Consensus 232 ~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~---a~e~g~~vlvDAa--q~~~~~m~~l-dls~~~~Dflv~S~ 304 (603)
..+. ..++++.+..-+|.||..++.+.+. + +.+++.++++|=+ .+.+. .++ .+....-=+++-||
T Consensus 125 ~~~~------~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~--~s~~~~~~~~~vi~l~Sf 196 (339)
T PRK06959 125 DTLP------AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA--ASLAAHTDRPGLVVLRSV 196 (339)
T ss_pred hhcc------ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc--ccchhccCCCCEEEEecC
Confidence 1111 1244566666689999999997553 3 4567888888975 22221 111 11111112778899
Q ss_pred cccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 305 YQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 305 hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
=|.||. .| +|.++..+++++.+
T Consensus 197 SK~~gl--~GlRiGy~v~~~~li~~l 220 (339)
T PRK06959 197 GKFFGL--AGVRAGFVLAAPALLAAL 220 (339)
T ss_pred hhhcCC--cchheEEEecCHHHHHHH
Confidence 999994 36 79888876655444
No 286
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.29 E-value=0.00091 Score=73.53 Aligned_cols=227 Identities=15% Similarity=0.153 Sum_probs=129.9
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCccccccccccH-HHHH----HHHhCCcEEEEeccccC----CCCCCCCCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY-LWMR----IAQENDWHILIDACALG----PKDMDSFGLSLVRP 297 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl-~~i~----~a~e~g~~vlvDAaq~~----~~~m~~ldls~~~~ 297 (603)
.+.+++.|........+..-|.+=-+..+.|.+.|= .|++ +|+++|+.+++|=+|.+ |+ |-.+.-....|
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~-~fa~E~~gv~P 284 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGK-MFAFEHFGVEP 284 (447)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-chhhhhcCCCC
Confidence 334555554322222345444444455578886664 4764 57899999999998876 32 22222223369
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 298 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
|.+++| |-+|. -.=+|+++.|++.+. ..|...+|+ | .| .++.
T Consensus 285 Divt~a--K~ig~-G~Pl~avv~r~ei~~-~~~g~~~~T----------f-----------------------~G-Npva 326 (447)
T COG0160 285 DIVTLA--KSLGG-GLPLSAVVGRAEIMD-WPPGGHGGT----------F-----------------------GG-NPVA 326 (447)
T ss_pred CEEEec--ccccC-CCceeEEeccHHhcc-cCCcccCCC----------C-----------------------Cc-CHHH
Confidence 999886 64431 112889999998875 433222222 0 01 1222
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
..+++ +.||.+.+ +.+.+|...+-++|.++|.+|..
T Consensus 327 ~Aaa~-----------------------------------------AvL~vie~---e~L~~~a~~~G~~l~~~L~~l~~ 362 (447)
T COG0160 327 CAAAL-----------------------------------------AVLDVIEE---ENLLERAAELGEYLRDRLEELQE 362 (447)
T ss_pred HHHHH-----------------------------------------HHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHh
Confidence 22222 35554443 46777888999999999988753
Q ss_pred CCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCc-cCHHH---HHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHh
Q 007454 458 PNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREK-IEPVL---VQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEK 533 (603)
Q Consensus 458 ~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~-v~~~~---V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~ 533 (603)
. .|.| |.- .-+|-.+..-+-+..... -++++ |...+-++|+.+-+
T Consensus 363 ~----~~~I---gdV--RG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~---------------------- 411 (447)
T COG0160 363 K----HPLI---GDV--RGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLT---------------------- 411 (447)
T ss_pred h----cCce---ecc--cccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEec----------------------
Confidence 1 2322 321 134556666555422111 12222 33333445654321
Q ss_pred hhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 534 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
|+ ....+||+..-.--|.|++|..++.|.+.|.+
T Consensus 412 ---~G-------------~~~nviRi~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 412 ---CG-------------PHGNVLRILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred ---cC-------------CCCcEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 11 11359999999999999999999999987754
No 287
>PRK06855 aminotransferase; Validated
Probab=98.27 E-value=0.00028 Score=77.82 Aligned_cols=144 Identities=15% Similarity=0.125 Sum_probs=88.1
Q ss_pred HHHHHHHHHc------CCCCCcEEEeccCc-hHHHHHH-------------------H--HHHcCCEEEEEeccC-Cccc
Q 007454 174 AMKKRIMDFL------NISENDYVYDYESE-AVEAMIR-------------------T--SEKRGARVMSAEFSW-PRLR 224 (603)
Q Consensus 174 ~aR~~Ia~~l------na~~~e~vf~~es~-sV~~~~~-------------------~--a~~~Ga~V~~~~~~~-~~g~ 224 (603)
+.|+.|++++ ++++++++.+...+ ++..+.. . ....|+++..++.+. .+..
T Consensus 77 ~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~ 156 (433)
T PRK06855 77 ETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYGLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWY 156 (433)
T ss_pred HHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHHhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCC
Confidence 6777777776 35677886654321 2111111 1 123477777777652 2235
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEeccc--cC--CCCCCCC-CCCCC
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACA--LG--PKDMDSF-GLSLV 295 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq--~~--~~~m~~l-dls~~ 295 (603)
++.++|++.+... ++++++.++.-+|.||.++|.+.+ +.|+++|++++.|-+- +. +..+.++ .+..-
T Consensus 157 ~d~~~l~~~~~~~----~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~ 232 (433)
T PRK06855 157 PDLDDLENKVKYN----PSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGD 232 (433)
T ss_pred CCHHHHHHHHhcC----CCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCc
Confidence 7899999988631 246777777789999999998743 3578999999999852 21 2110111 11111
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEe
Q 007454 296 RPDFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 296 ~~Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
..-+++.|+=|.|+.|---+|.+++.
T Consensus 233 ~~~I~~~S~SK~~~~pGlRiG~ii~p 258 (433)
T PRK06855 233 VPGIALKGISKELPWPGSRCGWIEVY 258 (433)
T ss_pred CCeEEEecCccccCCCcceEEEEEEe
Confidence 12378899999998531227887763
No 288
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.25 E-value=0.00011 Score=82.77 Aligned_cols=228 Identities=13% Similarity=0.171 Sum_probs=132.1
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCC--CCCCCCCCCCCcE
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKD--MDSFGLSLVRPDF 299 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~--m~~ldls~~~~Df 299 (603)
++|+++|.... .++...|.+--+....|.+.| ++.+ ++|+++|+++++|=+|. +|.. |--.+.....||+
T Consensus 247 ~~le~~l~~~~--~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDi 324 (504)
T PLN02760 247 DNLENLILKEG--PETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDL 324 (504)
T ss_pred HHHHHHHHhcC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcE
Confidence 45777765211 124555555444456799888 7766 48999999999998773 3321 1111222345997
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCC-CceeccccccccccccccCCCCCCcccCcccccccccCCCChhh
Q 007454 300 LICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 378 (603)
Q Consensus 300 lv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~g 378 (603)
+++ =|-+|+.-.-+|++++++++++.+.+.... |.. .-.+|-+- .
T Consensus 325 vtl--gK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~-------------------------------~h~~T~~g-n 370 (504)
T PLN02760 325 VSL--AKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSF-------------------------------AHGFTYSG-H 370 (504)
T ss_pred EEe--cccccCCccccceEeecHHHHhhhhcccccccCc-------------------------------ccCCCCCC-C
Confidence 666 476652000188999998887666431100 100 00112111 1
Q ss_pred hhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 007454 379 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHP 458 (603)
Q Consensus 379 i~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~ 458 (603)
+++++ +++ +.|+.+++ +.+.++++.+.++|.++|.++..
T Consensus 371 Pl~~A------------aal-------------------------a~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~~- 409 (504)
T PLN02760 371 PVSCA------------VAL-------------------------EALKIYKE---RNIPEHVNKIAPRFQDGIKAFSG- 409 (504)
T ss_pred HHHHH------------HHH-------------------------HHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhc-
Confidence 22222 011 46776654 35677889999999999988731
Q ss_pred CCCCCceE-EEeCCCCCCCCCCEEEEEEccCCC--CccC-----HHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHH
Q 007454 459 NTEGNALV-KIYGPKIRFDRGPALAFNVFDWKR--EKIE-----PVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNV 530 (603)
Q Consensus 459 ~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g--~~v~-----~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~ 530 (603)
.|.| .|- .+|-++.+.+.+..+ +... ...+.+.+.++||.++..
T Consensus 410 ----~~~v~~vr------G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~------------------ 461 (504)
T PLN02760 410 ----SPIIGEIR------GTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA------------------ 461 (504)
T ss_pred ----CCCeeeEE------eCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec------------------
Confidence 2222 222 256788887755322 1111 112333334567665421
Q ss_pred HHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 531 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 531 l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+ .++|+++.+-.|.+|||++++.+.+.|..
T Consensus 462 ----------------------g-~~lrl~Ppl~it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 462 ----------------------G-DNIMMSPPLIITPEEVDELISIYGKALKA 491 (504)
T ss_pred ----------------------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 37899999999999999999999998875
No 289
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.23 E-value=0.00012 Score=81.05 Aligned_cols=209 Identities=11% Similarity=0.114 Sum_probs=122.6
Q ss_pred CeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCcEEEEcccccCCCCCCc
Q 007454 243 QRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSG 314 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~Dflv~S~hK~fG~~P~G 314 (603)
++..|.+--+....|.+.| ++.+ ++|+++|+.+++|=+|.+ +.. |--...-...||.++++ |-+|. |
T Consensus 219 ~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~g--K~l~~---G 293 (443)
T PRK06058 219 NLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTA--KGIAG---G 293 (443)
T ss_pred ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEc--ccccC---C
Confidence 4555555545555687765 4444 378999999999987653 210 11112223569999997 97652 4
Q ss_pred --eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhh-hhhhhhhhcCccc
Q 007454 315 --FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG-PMSIEMRQSGKLE 391 (603)
Q Consensus 315 --~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~g-i~gl~~~~~~~~~ 391 (603)
+|+++.++++++.+.+...+++ + + .|..+ .+++
T Consensus 294 ~Pi~av~~~~~i~~~~~~~~~~~T----------~------------------------~-gnpl~~aaa~--------- 329 (443)
T PRK06058 294 LPLSAVTGRAEIMDAPHPGGLGGT----------Y------------------------G-GNPVACAAAL--------- 329 (443)
T ss_pred CccEEEEEcHHHHhhccCCCCCCC----------C------------------------C-CCHHHHHHHH---------
Confidence 8999999888765543211111 0 0 11111 1111
Q ss_pred cchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceE-EEeC
Q 007454 392 QGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYG 470 (603)
Q Consensus 392 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv-~Iyg 470 (603)
+.|+.+.+ +.+.++++.+.++|.++|.++... .++| .|-
T Consensus 330 --------------------------------a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~----~~~i~~vr- 369 (443)
T PRK06058 330 --------------------------------AAIETIEE---DDLVARARQIEALMTDRLRALAAE----DDRIGDVR- 369 (443)
T ss_pred --------------------------------HHHHHHHH---cCHHHHHHHHHHHHHHHHHHHHhh----CCcEEeee-
Confidence 46666544 356677888888899988876311 1222 222
Q ss_pred CCCCCCCCCEEEEEEccCCCCccCHHH---HHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccc
Q 007454 471 PKIRFDRGPALAFNVFDWKREKIEPVL---VQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRK 547 (603)
Q Consensus 471 p~~~~~rg~ivsFnv~~~~g~~v~~~~---V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 547 (603)
.+|.++.+.+.+.....-+... +.+.+-++||.++.+
T Consensus 370 -----g~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~----------------------------------- 409 (443)
T PRK06058 370 -----GRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTC----------------------------------- 409 (443)
T ss_pred -----ccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEecc-----------------------------------
Confidence 3577777777442110001112 222233567776532
Q ss_pred cCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 548 DKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 548 ~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+.. ..+||+.+.+-.|.+||+++++.|.+++.+
T Consensus 410 --~~~-~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 410 --GTY-GNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred --CCC-CCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 001 148999999999999999999999988753
No 290
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.21 E-value=0.00093 Score=71.81 Aligned_cols=258 Identities=16% Similarity=0.138 Sum_probs=142.3
Q ss_pred HHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCcccccc-ccccHH-HHHHHHhCCcEEE
Q 007454 199 VEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTG-ARYPYL-WMRIAQENDWHIL 276 (603)
Q Consensus 199 V~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG-~~~pl~-~i~~a~e~g~~vl 276 (603)
+.-+...++-.|.+|...+.+ +.++|++. .. ..+--+.+..- |..| ...++. .+..+|++|++|+
T Consensus 178 ~~Vl~Tra~~~g~~i~~~~~~------d~~~l~~~-~~-----~~~~gv~vQyP-~~~G~~~~d~~~l~~~~h~~~al~~ 244 (450)
T COG0403 178 LDVLRTRAEGLGIEIEVVDAD------DLDDLESA-DD-----GDVFGVLVQYP-NTFGIVEEDLRALIEAAHSAGALVI 244 (450)
T ss_pred HHHHHhhcccCceEEEEeccc------hhhhhhhc-cc-----cCeEEEEEecC-CCCCccchhHHHHHHHHhhcCCEEE
Confidence 334455566667777766553 45666665 32 23433333333 4788 666698 4568999999887
Q ss_pred Eec--cccCCCCCCCCCCCCCCCcEEEEccccc-----CCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccc
Q 007454 277 IDA--CALGPKDMDSFGLSLVRPDFLICSFYQI-----FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLT 349 (603)
Q Consensus 277 vDA--aq~~~~~m~~ldls~~~~Dflv~S~hK~-----fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~ 349 (603)
|=+ -+++=- -| --+++.|.++.+...+ ||+ | ..|++-+|++....+.-..+| ...+....+-+-.
T Consensus 245 v~aDplaL~LL--~p--PGe~GADIvvG~~QrfGvPmgfGG-P-hag~fA~~~~~~R~mPGRlVG-~S~D~~G~~A~rL- 316 (450)
T COG0403 245 VAADPLALGLL--KP--PGEFGADIVVGSAQRFGVPMGFGG-P-HAGYFAVKDEFKRQMPGRLVG-VSVDAAGKRAFRL- 316 (450)
T ss_pred EEechhHhhcc--CC--ccccCCceEEecCcccCCCcCCCC-c-ceeeeeEhHhHhhcCCCceee-eeecCCCCchhhh-
Confidence 733 222211 01 1257999999999995 665 3 678899999876544333333 2111111000000
Q ss_pred cccCCCCCCcc-cCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHH-
Q 007454 350 DEFSSCETEPE-QTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLD- 427 (603)
Q Consensus 350 ~~~~~~~~e~~-~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald- 427 (603)
-+++. ++- | .|--|.|+-..=+| .++- +++-
T Consensus 317 ------aLQTREQHI-R---ReKATSNICTnQaL-------------lA~~------------------------As~y~ 349 (450)
T COG0403 317 ------ALQTREQHI-R---REKATSNICTNQAL-------------LALA------------------------ASMYA 349 (450)
T ss_pred ------hHHHHHHHH-h---hhccchhhhHHHHH-------------HHHH------------------------HHHHH
Confidence 00100 010 1 24456565533222 1111 2221
Q ss_pred -HHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCC
Q 007454 428 -QVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADREN 506 (603)
Q Consensus 428 -~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~g 506 (603)
++=.-|+.+|..|+..++.+|..+|+++.. | +++.... .--.+.+.+.. + + ...+.+.+...|
T Consensus 350 ~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~----g---~~~~~~~----fFdt~~v~~~~---~-~-~~~l~~~~~~~G 413 (450)
T COG0403 350 VYHGPQGLKEIAERIHRLAAYLAAGLKEIGA----G---VELVFDH----FFDTFTVRVPE---E-V-AEALLAAAIAGG 413 (450)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHhhcCC----c---eEecccc----ceeeEEEecch---h-H-HHHHHHHHHhcC
Confidence 222237999999999999999999997632 2 4554431 22355555542 1 1 122333333456
Q ss_pred cEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 007454 507 ISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 580 (603)
Q Consensus 507 I~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~ 580 (603)
|-+|.= ....+=+++-=.+|.+||+.||+.+...
T Consensus 414 ~~L~~~----------------------------------------~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 414 INLRRV----------------------------------------DADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred Cceeee----------------------------------------cCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 665421 1126778888899999999999988654
No 291
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.21 E-value=0.0012 Score=72.97 Aligned_cols=223 Identities=12% Similarity=0.151 Sum_probs=127.7
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEE-eCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVF-PLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~-~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
.++|++.|... ..+...|.+ |..+...|.+.| ++.+ ++|+++|+++++|=+|.+ |.. |-..+.....|
T Consensus 191 ~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~P 267 (428)
T PRK07986 191 IAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAP 267 (428)
T ss_pred HHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCC
Confidence 45667777531 234555555 444666676543 3334 378999999999987753 221 11112233469
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 298 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
|++++ =|-+|+.-.=+|++.+++++++.+.+.. .+.. +..+|.+ .
T Consensus 268 Di~t~--gK~l~gG~~p~~av~~~~~i~~~~~~~~-~~~~-------------------------------~~~~T~~-g 312 (428)
T PRK07986 268 DILCL--GKALTGGTMTLSATLTTREVAETISNGE-AGCF-------------------------------MHGPTFM-G 312 (428)
T ss_pred CEEEe--chhhhCCcccCcchhchHHHHHHhhcCC-CCcc-------------------------------ccCCCCC-c
Confidence 98864 5754420001477777777765554210 0000 0112221 1
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
.++++++ ++ +.|+.+++- .+.++++.+.++|.+.|.++..
T Consensus 313 ~p~~~aa------------a~-------------------------a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~ 352 (428)
T PRK07986 313 NPLACAV------------AN-------------------------ASLSLLESG---DWQQQVAAIEAQLREELAPLRD 352 (428)
T ss_pred CHHHHHH------------HH-------------------------HHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhc
Confidence 1222220 11 467766543 4477888888899888887731
Q ss_pred CCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhc
Q 007454 458 PNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDR 536 (603)
Q Consensus 458 ~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~ 536 (603)
.|.| .|- -+|.++++.+.+.. ....+...+-++||.++..
T Consensus 353 -----~~~i~~vR------g~Gl~~~ve~~~~~----~~~~~~~~l~~~Gl~~~~~------------------------ 393 (428)
T PRK07986 353 -----APMVADVR------VLGAIGVVETTRPV----NMAALQRFFVEQGVWIRPF------------------------ 393 (428)
T ss_pred -----CCCEEeEe------ccceEEEEEeCCcc----cHHHHHHHHHHCCcEEEec------------------------
Confidence 1223 122 35778888886531 1223444445678776421
Q ss_pred ccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 537 EAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+ .+||+.+.+-.|.+||+++++.|.+.|+.
T Consensus 394 ----------------g-~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 394 ----------------G-KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred ----------------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 1 38999999999999999999999988755
No 292
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.21 E-value=5.6e-06 Score=88.52 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=84.9
Q ss_pred HHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCcccccccc--ccHH-HHHHHHhCCcEEEEeccc
Q 007454 205 TSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGAR--YPYL-WMRIAQENDWHILIDACA 281 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~--~pl~-~i~~a~e~g~~vlvDAaq 281 (603)
..+..|+++..+. ...+-+..+++..|.. +|.+.-..+.+|. |.. .|.+ .+.+||++|+.|++|+++
T Consensus 127 ~~~~aG~~l~EvG---~tn~t~~~d~~~AIne------~ta~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aS 196 (395)
T COG1921 127 IIRLAGAKLVEVG---TTNRTHLKDYELAINE------NTALLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLAS 196 (395)
T ss_pred HHHHcCCEEEEec---ccCcCCHHHHHHHhcc------CCeeEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCC
Confidence 3445588877665 3456788999999985 5776666666664 443 4555 557999999999999987
Q ss_pred cCCCCCCCCCCC---CCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCC
Q 007454 282 LGPKDMDSFGLS---LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDN 331 (603)
Q Consensus 282 ~~~~~m~~ldls---~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~ 331 (603)
-..-+ ..-++. +.++|.+++|++|+||+ |+ -|++..||++++.++..
T Consensus 197 g~~v~-~e~~l~~~la~GaDLV~~SgdKllgG-Pq-aGii~GkKelI~~lq~~ 246 (395)
T COG1921 197 GALVD-KEPDLREALALGADLVSFSGDKLLGG-PQ-AGIIVGKKELIEKLQSH 246 (395)
T ss_pred ccccc-cccchhHHHhcCCCEEEEecchhcCC-Cc-cceEechHHHHHHHHhh
Confidence 55432 133444 46899999999999998 87 89999999998877754
No 293
>PRK07482 hypothetical protein; Provisional
Probab=98.21 E-value=0.0015 Score=72.79 Aligned_cols=232 Identities=12% Similarity=0.115 Sum_probs=125.3
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCccccccccccH-HHH----HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCc
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY-LWM----RIAQENDWHILIDACALG-PKD--MDSFGLSLVRPD 298 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl-~~i----~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~D 298 (603)
.+.|++.|... ..+++.-|.+--+....|.+.|- ..+ ++|+++|+++++|=+|.+ |.. |--...-...||
T Consensus 206 ~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PD 283 (461)
T PRK07482 206 ADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPD 283 (461)
T ss_pred HHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCC
Confidence 45677777421 11244444443344556877553 333 368999999999987664 221 111222234699
Q ss_pred EEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCC-CCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 299 FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTS-SGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 299 flv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~-gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
+++++ |.+|+.-.-+|++++++++++.+....- .|.+ .-.+|.+ .
T Consensus 284 iv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~-------------------------------~h~~T~~-g 329 (461)
T PRK07482 284 LITVA--KGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAI-------------------------------GHGWTYS-G 329 (461)
T ss_pred EEEEc--cccccCccccceeeecHHHHHHHhcccccCCcc-------------------------------ccCCCCC-c
Confidence 99974 7654200016888888877544432100 0100 0012211 1
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
.++++++ ++ +.|+.+++ +.+.++++.+.++|.++|.++..
T Consensus 330 npl~~Aa------------a~-------------------------a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~ 369 (461)
T PRK07482 330 HPICAAA------------AL-------------------------ANLDILER---ENLVGNAAEVGAYFRARLRAAFG 369 (461)
T ss_pred CHHHHHH------------HH-------------------------HHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHh
Confidence 1222220 11 46666654 34566778888888888876531
Q ss_pred CCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCC--CccCH-----HHHHHHHhcCCcEEeeCcccCccCCchhhhhhHH
Q 007454 458 PNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKR--EKIEP-----VLVQKLADRENISLSYGSLHHIWFSDKYQKEKDN 529 (603)
Q Consensus 458 ~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g--~~v~~-----~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~ 529 (603)
. .|.| .|- .+|.++.+.+.+... +..++ ..+...+-++||.++.+
T Consensus 370 ~----~~~v~~vr------G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------------- 422 (461)
T PRK07482 370 D----HPLVGEVR------GVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAM----------------- 422 (461)
T ss_pred c----CCCEEEEe------eceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecC-----------------
Confidence 1 1222 222 356777777753211 11111 12333334567665421
Q ss_pred HHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 530 VLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 530 ~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
. ...+||+.+.+-.|.+||+++++.+.+.|+.
T Consensus 423 --------------------~--~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 423 --------------------P--HGDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred --------------------C--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 0148999999999999999999999998865
No 294
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.21 E-value=0.0012 Score=73.27 Aligned_cols=228 Identities=19% Similarity=0.237 Sum_probs=127.7
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEE-eCcccccccccc-HHHH---H-HHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVF-PLHSRMTGARYP-YLWM---R-IAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~-~~~Sn~TG~~~p-l~~i---~-~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
.++|++.|... ..+..-|.+ |.+....|.+.| -.++ . +|+++|+.+++|=+|.+ |.. |--.+.-...|
T Consensus 208 ~~~l~~~l~~~---~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~P 284 (453)
T PRK06943 208 LADVRRLFAER---AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWP 284 (453)
T ss_pred HHHHHHHHHhC---CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCC
Confidence 36677777531 124544444 533555787665 3333 3 68999999999987653 221 11112223469
Q ss_pred cEEEEcccccCC-CC-CCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCC
Q 007454 298 DFLICSFYQIFG-EN-PSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 375 (603)
Q Consensus 298 Dflv~S~hK~fG-~~-P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n 375 (603)
|+++++ |-+| +. | +|++++++++++.+.+....+. + +-.+|..
T Consensus 285 Divt~g--Kgl~gG~~P--i~av~~~~ei~~~~~~~~~~~~-----------------------------~--~~~~T~~ 329 (453)
T PRK06943 285 DFLCLS--KGISGGYLP--LSLVLSRDAIFAAFYDDDVTRG-----------------------------F--LHSHSYT 329 (453)
T ss_pred CeEeee--hhhccCccc--ceEEEEcHHHHHhhcccCccCC-----------------------------c--cCCCCCC
Confidence 999984 6443 21 3 8999999988755542100000 0 0012210
Q ss_pred hhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC
Q 007454 376 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 455 (603)
Q Consensus 376 ~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L 455 (603)
..+++++ +++ +.|+.+++- .+-++++.+.++|.++|.+|
T Consensus 330 -gnpl~~a------------aa~-------------------------a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l 368 (453)
T PRK06943 330 -GNPLACR------------AAL-------------------------ATLDLFAED---DVLARNARKSARLRAALAPL 368 (453)
T ss_pred -CCHHHHH------------HHH-------------------------HHHHHHHhc---CHHHHHHHHHHHHHHHHHHH
Confidence 0122222 011 467776653 35567777888888888776
Q ss_pred CCCCCCCCceEE-EeCCCCCCCCCCEEEEEEc-cCCC-CccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHH
Q 007454 456 QHPNTEGNALVK-IYGPKIRFDRGPALAFNVF-DWKR-EKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLE 532 (603)
Q Consensus 456 ~h~~~~g~plv~-Iygp~~~~~rg~ivsFnv~-~~~g-~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~ 532 (603)
.. .|.|. | ..+|-++.+.+. +.+. ..+ ...+.+.+-++||.++.
T Consensus 369 ~~-----~~~v~~v------rG~Gl~~gvel~~~~~~~~~~-~~~i~~~~~~~Gll~~~--------------------- 415 (453)
T PRK06943 369 AA-----HPQVRHL------RQRGTIFAFDVALDGDAARTF-SRRFFEAALERELLLRP--------------------- 415 (453)
T ss_pred hc-----CCCEEeE------eccccEEEEEEccCCCcchHH-HHHHHHHHHHCCcEEEe---------------------
Confidence 31 12231 2 235778888885 2110 001 11233333456666531
Q ss_pred hhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhhhh
Q 007454 533 KTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDADFV 586 (603)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~f~ 586 (603)
.+ .++|+++-+-.|.+||+++++.|.+.|++-+.
T Consensus 416 -------------------~g-~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 449 (453)
T PRK06943 416 -------------------IG-TTVYLMPPYVLDDDEIAWLAERTRATLDATLA 449 (453)
T ss_pred -------------------cC-CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 01 37999999999999999999999999987543
No 295
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=98.21 E-value=0.0014 Score=72.09 Aligned_cols=226 Identities=14% Similarity=0.143 Sum_probs=126.1
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCccccccc-cccHH---HH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCc
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGA-RYPYL---WM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRPD 298 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~-~~pl~---~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~D 298 (603)
.+.+++.+... ....+...|.+--+....|. ..|-+ .+ ++|+++|+++++|=++.+ +.. |.....-...||
T Consensus 183 ~~~l~~~~~~~-~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pD 261 (421)
T PRK06777 183 LSSVERLFKAD-IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPD 261 (421)
T ss_pred HHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCC
Confidence 45677777521 01124555555555667786 46643 33 368999999999987652 221 111121233599
Q ss_pred EEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhh
Q 007454 299 FLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 378 (603)
Q Consensus 299 flv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~g 378 (603)
.++ +=|.+|. ---+|+++.++++++.+.+...+++ + .| .++..
T Consensus 262 iv~--~sK~l~~-G~pigav~~~~~i~~~~~~~~~~~T----------~-----------------------~~-~p~~~ 304 (421)
T PRK06777 262 LIT--MAKSLGG-GMPISAVVGRAEVMDAPAPGGLGGT----------Y-----------------------AG-NPLAV 304 (421)
T ss_pred EEe--eehhhcC-CCceEEEEEcHHHHhccCCCCCCCC----------C-----------------------Cc-CHHHH
Confidence 764 6687761 0117999998877655543211111 0 01 11111
Q ss_pred hhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 007454 379 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHP 458 (603)
Q Consensus 379 i~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~ 458 (603)
.+++ ++|+.+++ +.+.++.+.+.++|.++|.++...
T Consensus 305 aaa~-----------------------------------------a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~ 340 (421)
T PRK06777 305 AAAL-----------------------------------------AVLDVIAE---EKLCQRALILGAHLVEVLEKAKAS 340 (421)
T ss_pred HHHH-----------------------------------------HHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111 46666554 456778888889999999876311
Q ss_pred CCCCCceEEEeCCCCCCCCCCEEEEEEccCC-CCccCHHH---HHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhh
Q 007454 459 NTEGNALVKIYGPKIRFDRGPALAFNVFDWK-REKIEPVL---VQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKT 534 (603)
Q Consensus 459 ~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~-g~~v~~~~---V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~ 534 (603)
.|.+.-. ..+|.++.+.+.+.. +.. ..+. +.+.+-++||.+..|.
T Consensus 341 ----~~~i~~v-----rg~G~~~~i~~~~~~~~~~-~~~~~~~l~~~~~~~Gv~i~~~~--------------------- 389 (421)
T PRK06777 341 ----CPAIVDI-----RARGSMVAVEFNDPQTGKP-SPEFTRQYQRQALEEGLLLLSCG--------------------- 389 (421)
T ss_pred ----CCCeEEe-----cCceEEEEEEEecCccCCc-cHHHHHHHHHHHHhCCeEEeecC---------------------
Confidence 1222211 135667776554321 110 1111 2222345777765320
Q ss_pred hcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 007454 535 DREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~ 582 (603)
.. ..+||+++.+.-|.++|+++++.|.++|.
T Consensus 390 ----------------~~-g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 390 ----------------VH-GNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred ----------------CC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 01 14899999999999999999999998874
No 296
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.20 E-value=0.00061 Score=75.03 Aligned_cols=96 Identities=16% Similarity=0.198 Sum_probs=60.8
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccCCC--CCCCCCCCCCCCc
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALGPK--DMDSFGLSLVRPD 298 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~~~--~m~~ldls~~~~D 298 (603)
+.++|++.+... ..++..|++-.+...+|.+.| ++.+ ++|+++|+++++|=++.+-. .+...+.-...||
T Consensus 183 d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pD 259 (426)
T PRK00062 183 DLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPD 259 (426)
T ss_pred CHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcc
Confidence 577888877531 135666665544445899998 6645 58999999999998765321 0111111123588
Q ss_pred EEEEcccccCCCCCCc--eEEEEEeCCCCcCcC
Q 007454 299 FLICSFYQIFGENPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 299 flv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~ 329 (603)
+++ +-|-+|. | +|++..++++++.+.
T Consensus 260 i~~--~gK~l~~---G~p~ga~~~~~~i~~~~~ 287 (426)
T PRK00062 260 LTT--LGKIIGG---GLPVGAFGGRREIMEQLA 287 (426)
T ss_pred hHh--hhhHhhC---CCcceeeeEHHHHHHhhc
Confidence 654 4597762 3 788888877766554
No 297
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=98.16 E-value=0.00025 Score=77.35 Aligned_cols=85 Identities=16% Similarity=0.083 Sum_probs=54.6
Q ss_pred CCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEeccc--cCCCCCCCCCCCCCC----CcEEEEcccccCCCC
Q 007454 242 KQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACA--LGPKDMDSFGLSLVR----PDFLICSFYQIFGEN 311 (603)
Q Consensus 242 ~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq--~~~~~m~~ldls~~~----~Dflv~S~hK~fG~~ 311 (603)
.+++++.++.-+|.||..++.+.+ +.|++++++++.|-+- +......+..+..+. .-+++.||=|.||.+
T Consensus 175 ~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~p 254 (409)
T PRK07590 175 EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFT 254 (409)
T ss_pred cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCc
Confidence 367888888888999999998733 3578999999999752 221100111222221 125677999999853
Q ss_pred CCceEEEEEeCCCCc
Q 007454 312 PSGFGCLFVKKSTVP 326 (603)
Q Consensus 312 P~G~G~L~vkk~~~~ 326 (603)
-.-+|.++..+++++
T Consensus 255 GlRiG~~i~~~~li~ 269 (409)
T PRK07590 255 GTRCAYTVVPKELKG 269 (409)
T ss_pred CceeEEEEcCHHHhh
Confidence 122788887766543
No 298
>PRK07480 putative aminotransferase; Validated
Probab=98.12 E-value=0.003 Score=70.32 Aligned_cols=94 Identities=16% Similarity=0.195 Sum_probs=55.9
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCC--CCCCCCCCCCCcE
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKD--MDSFGLSLVRPDF 299 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~--m~~ldls~~~~Df 299 (603)
+.|++.+.... ..++..|.+--+....|.+.| ++.+ ++|+++|+++++|=+|. .|.. |--.+.....||+
T Consensus 206 ~~l~~~~~~~~--~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDi 283 (456)
T PRK07480 206 RQLEAKILELG--ADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDL 283 (456)
T ss_pred HHHHHHHHhcC--CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCe
Confidence 45555553211 124544444334445788777 4544 37899999999998764 2321 1112222346998
Q ss_pred EEEcccccCCCCCCc---eEEEEEeCCCCcCc
Q 007454 300 LICSFYQIFGENPSG---FGCLFVKKSTVPIL 328 (603)
Q Consensus 300 lv~S~hK~fG~~P~G---~G~L~vkk~~~~~L 328 (603)
+++ =|-+|+ | +|++++++++++.+
T Consensus 284 v~~--gK~l~g---G~~Pi~av~~~~~i~~~~ 310 (456)
T PRK07480 284 MTI--AKGLTS---GYIPMGAVGVGDRVAEVL 310 (456)
T ss_pred eee--ehhhcc---CCccceEEEEcHHHHHHH
Confidence 877 475542 3 79999998876554
No 299
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.11 E-value=0.0019 Score=71.28 Aligned_cols=223 Identities=10% Similarity=0.066 Sum_probs=128.5
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeC-ccccccccc-cHHHHH----HHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPL-HSRMTGARY-PYLWMR----IAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~-~Sn~TG~~~-pl~~i~----~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
.+.|++.|... ..+..-|.+-- .....|.+. |-.++. +|+++|+++++|=+|.+ |.. |...+.....|
T Consensus 193 l~~l~~~i~~~---~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~P 269 (429)
T PRK06173 193 IEPLQDLLEQK---GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVP 269 (429)
T ss_pred HHHHHHHHHhC---CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCC
Confidence 45566777531 12454444444 255668764 444443 58899999999987753 221 10111223469
Q ss_pred cEEEEcccccCCC-CCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCCh
Q 007454 298 DFLICSFYQIFGE-NPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTF 376 (603)
Q Consensus 298 Dflv~S~hK~fG~-~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~ 376 (603)
|+++ +=|-+|+ .. =+|++++++++++.+.+.. .+. + .-.+|...
T Consensus 270 Div~--~gK~l~gG~~-p~~a~~~~~~i~~~~~~~~-~~~-----------------------------~--~~~~T~~g 314 (429)
T PRK06173 270 DIMC--IGKALTGGYL-TLSATITTEAIAQTICSGE-AKC-----------------------------F--MHGPTFMA 314 (429)
T ss_pred CEEE--eehhhhCCcc-ccceEEecHHHHHHHhcCC-CCc-----------------------------c--ccCCCCCc
Confidence 9887 4675542 01 1578888887765443210 000 0 00112110
Q ss_pred hhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCC
Q 007454 377 SGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQ 456 (603)
Q Consensus 377 ~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~ 456 (603)
.+++++ +++ ++|+.+++- .+.++++.+.++|.++|.++.
T Consensus 315 -~p~~~a------------aa~-------------------------a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~ 353 (429)
T PRK06173 315 -NPLACA------------IAA-------------------------ESIRLLLES---PWQQNIQRIEAQLKQELAPAA 353 (429)
T ss_pred -CHHHHH------------HHH-------------------------HHHHHHHhC---CHHHHHHHHHHHHHHHHHHhh
Confidence 122222 011 577777653 346778888899999888652
Q ss_pred CCCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhh
Q 007454 457 HPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTD 535 (603)
Q Consensus 457 h~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~ 535 (603)
+.|.| .+ ..+|.++++.+.+.. ....+.+.+.++||.++..
T Consensus 354 -----~~~~v~~v------Rg~Gl~~~iel~~~~----~~~~i~~~l~e~Gi~v~~~----------------------- 395 (429)
T PRK06173 354 -----EFDSVAEV------RVLGAIGVVEMKEPV----NMATLQPRFVEHGIWVRPF----------------------- 395 (429)
T ss_pred -----cCCCeeee------eccceEEEEEeCCcc----cHHHHHHHHHHCCeEEEec-----------------------
Confidence 12323 12 136889999886531 1234555555678877421
Q ss_pred cccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhh
Q 007454 536 REAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
+ .+||+.+-+-.|.+||+++++.|.+.|+.-
T Consensus 396 -----------------g-~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 396 -----------------G-KLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred -----------------C-CEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1 389999999999999999999999988753
No 300
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=98.11 E-value=0.00042 Score=76.79 Aligned_cols=223 Identities=12% Similarity=0.105 Sum_probs=127.9
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCcE
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRPDF 299 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~Df 299 (603)
+.+++.|... ...+++..|.+.-..|.+|.+.| ++.+ ++|+++|+++++|=++.+ +.. +.........||+
T Consensus 190 ~~~~~~l~~~-~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDi 268 (443)
T PRK08360 190 EYIKEKFEGE-VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDI 268 (443)
T ss_pred HHHHHHHHhc-cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCE
Confidence 3455556421 01135666666557788999888 3444 478999999999987652 221 1111122356898
Q ss_pred EEEcccccCCCCCCc--eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 300 LICSFYQIFGENPSG--FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 300 lv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
+++ =|-+| + | +|+++.++++++.+.....+.+ .+..+..
T Consensus 269 itl--sK~l~--~-G~pigav~~~~~i~~~~~~~~~~~T----------------------------------~~~~p~~ 309 (443)
T PRK08360 269 ITL--GKPLG--G-GLPISATIGRAEIMDSLPPLAHAFT----------------------------------LSGNPVA 309 (443)
T ss_pred EEe--ccccc--C-CceeEEEEEcHHHHhhhcCCCCCCC----------------------------------CCcCHHH
Confidence 765 79887 2 5 8999988877655542110000 0001111
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
..+++ ++|+.+.+- .+.++++.+.++|.+.|+++..
T Consensus 310 ~aaa~-----------------------------------------a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~ 345 (443)
T PRK08360 310 SAAAL-----------------------------------------AVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKK 345 (443)
T ss_pred HHHHH-----------------------------------------HHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 466666542 4567888888888888877631
Q ss_pred CCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCcc-CH---HHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHh
Q 007454 458 PNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKI-EP---VLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEK 533 (603)
Q Consensus 458 ~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v-~~---~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~ 533 (603)
. .|++ +.- ..+|-++.+.+.+...... +. ..+...+-++||.++..
T Consensus 346 ~----~~~v---~~v--rg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------------------- 395 (443)
T PRK08360 346 K----HELI---GDV--RGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF--------------------- 395 (443)
T ss_pred h----CCCe---eee--eccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec---------------------
Confidence 1 1222 110 1356677777643211100 11 12323334567765310
Q ss_pred hhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 534 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
...++|+++.+..|.+||+++++.+.+.++.
T Consensus 396 -------------------~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~ 426 (443)
T PRK08360 396 -------------------SGNVLRIQPPLTIEKEVLDEGLDILEEAIED 426 (443)
T ss_pred -------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 1248999999999999999999999998865
No 301
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.08 E-value=1.4e-06 Score=92.23 Aligned_cols=112 Identities=17% Similarity=0.205 Sum_probs=42.1
Q ss_pred HcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccc--cc--cccHH-HHHHHHhCCcEEEEeccc-
Q 007454 208 KRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT--GA--RYPYL-WMRIAQENDWHILIDACA- 281 (603)
Q Consensus 208 ~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~T--G~--~~pl~-~i~~a~e~g~~vlvDAaq- 281 (603)
..|++++.+-. +.+....|+++.|.+ +|.++-.-|.||.. |. ..|++ ++++||++++++++|+++
T Consensus 110 ~sGa~lvEVGt---tN~t~~~Dye~AI~e------~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG 180 (367)
T PF03841_consen 110 QSGARLVEVGT---TNRTHLSDYEKAITE------NTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSG 180 (367)
T ss_dssp ------------------------------------------------------------HHHHHHHHHT--EEEE-TTH
T ss_pred ccccccccccc---ccccccccccccccc------cccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCC
Confidence 34555555442 335567888888875 68888888888873 33 34565 567999999999999987
Q ss_pred --------cCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCC
Q 007454 282 --------LGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 330 (603)
Q Consensus 282 --------~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p 330 (603)
..|....--+.-..++|.++||+-|.+|+ |+ .|+++.||+.++.++.
T Consensus 181 ~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGG-PQ-aGiI~Gkk~lI~~lk~ 235 (367)
T PF03841_consen 181 LLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGG-PQ-AGIIVGKKELIEKLKK 235 (367)
T ss_dssp HHHHHHTT----------CCCCT-SEEEEETTSSSSS--S--EEEEEEHHHHHHHHH
T ss_pred CCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCC-CC-eEEEEeCHHHHHHHhh
Confidence 22221000112246899999999999998 87 6999999999877763
No 302
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=98.07 E-value=0.00048 Score=73.10 Aligned_cols=228 Identities=13% Similarity=0.148 Sum_probs=135.0
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH-HHHHHhCCcEEEEeccccCCCC-CCCCCCC-----CCCCc
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW-MRIAQENDWHILIDACALGPKD-MDSFGLS-----LVRPD 298 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~-i~~a~e~g~~vlvDAaq~~~~~-m~~ldls-----~~~~D 298 (603)
|+++|+++|..-. +..+++|+|-.+..++|.+-|+++ +..|+++|+...||-+..+|-- -.--++. ..++|
T Consensus 288 D~~hL~~lL~~~~--~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvD 365 (570)
T KOG1360|consen 288 DLDHLEQLLQSSP--KSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVD 365 (570)
T ss_pred CHHHHHHHHHhCC--CCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhh
Confidence 6889999987522 246799999999999999999985 5699999999999976544320 0011121 24678
Q ss_pred EEEEcccccCCCCCCceEEEEEe-CCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 299 FLICSFYQIFGENPSGFGCLFVK-KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 299 flv~S~hK~fG~~P~G~G~L~vk-k~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
.|+...=|-||. +|.-+.. +.+.+.++ ++-.|-+ |-...|+..
T Consensus 366 iIsGTLgKafGc----VGGYIAat~~LvDmiR-SyAaGFI-------------------------------FTTSLPP~v 409 (570)
T KOG1360|consen 366 IISGTLGKAFGC----VGGYIAATRKLVDMIR-SYAAGFI-------------------------------FTTSLPPMV 409 (570)
T ss_pred hcccchhhhccc----ccceehhhhhHHHHHH-HhcCceE-------------------------------EecCCChHH
Confidence 888888888772 4443332 22322222 1211211 111112221
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQ 456 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~ 456 (603)
..| ++ .+++++..- |......| +.-..++.+.|.++
T Consensus 410 -l~G---------------Al-------------------------eaVr~lk~~eg~~lR~~h-qrnv~~~kq~l~~~- 446 (570)
T KOG1360|consen 410 -LAG---------------AL-------------------------EAVRILKSEEGRVLRRQH-QRNVKYVKQLLMEL- 446 (570)
T ss_pred -HHh---------------HH-------------------------HHHHHHhhhhhHHHHHHH-HHHHHHHHHHHHHc-
Confidence 111 11 355555432 32222222 23344666666665
Q ss_pred CCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhc
Q 007454 457 HPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDR 536 (603)
Q Consensus 457 h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~ 536 (603)
|.|++ ..-..||-..|-|.. .....-..|..++||.|-+- .+..
T Consensus 447 -----GiPVi--------~~pSHIiPv~vgda~---l~~~~sd~Li~~h~iYvQaI-----NyPT--------------- 490 (570)
T KOG1360|consen 447 -----GIPVI--------PNPSHIIPVRVGDAA---LAKQASDILISKHNIYVQAI-----NYPT--------------- 490 (570)
T ss_pred -----CCccc--------CCCcceeeeeccCHH---HHHHHHHHHHHhcCeEEEec-----cCCc---------------
Confidence 67765 223568888887743 22333445678899998532 1110
Q ss_pred ccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 537 EAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
-.++..-+|+......|++=++.|++.+....++
T Consensus 491 -------------V~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~ 524 (570)
T KOG1360|consen 491 -------------VARGTERLRIAPTPHHTPQMMNILVNALLDVWNE 524 (570)
T ss_pred -------------ccccceeeecCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0133457999999999999999999999877665
No 303
>PTZ00376 aspartate aminotransferase; Provisional
Probab=98.06 E-value=0.00036 Score=76.08 Aligned_cols=110 Identities=11% Similarity=0.072 Sum_probs=72.9
Q ss_pred HHHHcCCEEEEEecc-CCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEec
Q 007454 205 TSEKRGARVMSAEFS-WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDA 279 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~-~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDA 279 (603)
.++..|++++.++.. ..+..++.+.+++.+... +++++++.++.-+|.||..++.+.+ ++|+++|++++.|-
T Consensus 140 ~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~---~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De 216 (404)
T PTZ00376 140 IFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTA---PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDM 216 (404)
T ss_pred HHHHcCCceeeccccCcccCCcCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeh
Confidence 456678888888872 123578899999988631 1346889999999999999998733 35789999999998
Q ss_pred cc--cCCCCC----CC-CCCCCCC-CcEEEEcccccCCCCCCc--eEEEE
Q 007454 280 CA--LGPKDM----DS-FGLSLVR-PDFLICSFYQIFGENPSG--FGCLF 319 (603)
Q Consensus 280 aq--~~~~~m----~~-ldls~~~-~Dflv~S~hK~fG~~P~G--~G~L~ 319 (603)
+- +..... .+ ..+.... -=+++.||=|.|| ..| +|.++
T Consensus 217 ~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~--~~GlRvG~~~ 264 (404)
T PTZ00376 217 AYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMG--LYGERIGALH 264 (404)
T ss_pred hhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCccc--ccccccceEE
Confidence 62 111000 00 1111111 1278899999999 335 77774
No 304
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.05 E-value=0.00061 Score=73.23 Aligned_cols=108 Identities=17% Similarity=0.190 Sum_probs=77.8
Q ss_pred HcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccc-cccHHHH-HHHHhCCcEEEEeccc---c
Q 007454 208 KRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGA-RYPYLWM-RIAQENDWHILIDACA---L 282 (603)
Q Consensus 208 ~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~-~~pl~~i-~~a~e~g~~vlvDAaq---~ 282 (603)
-.|.+|+.++.+ .+|.||+++|++++.. ++.-+-++.- |..|. --.|..| ++.|++|..|..|+|- .
T Consensus 176 m~G~~VV~V~~~-~~G~VDlddLk~k~~~------~~AalMiTnP-sT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~ 247 (496)
T COG1003 176 MAGFKVVVVKCD-ENGNVDLDDLRAKAED------NLAALMITNP-STLGVFEEDIREICEIVHEAGGQVYYDGANLNAI 247 (496)
T ss_pred hcCceEEEEecC-CCCCccHHHHHHHhcc------ceeEEEeccC-cccccchhhHHHHHHHHHHcCCEEEecCcchhhh
Confidence 359999999998 6999999999999873 3333333322 44565 4556644 5789999999999974 4
Q ss_pred CCCCCCCCCCCCCCCcEEEEcccccC------CCCCCceEEEEEeCCCCcCcC
Q 007454 283 GPKDMDSFGLSLVRPDFLICSFYQIF------GENPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 283 ~~~~m~~ldls~~~~Dflv~S~hK~f------G~~P~G~G~L~vkk~~~~~L~ 329 (603)
+|.. .| -+++.|.+=+..||.| |+ | |.|=.-||+.+..-|.
T Consensus 248 vG~~-rP---Gd~G~DV~HlNLHKTF~iPHGGGG-P-G~GPvgVk~~L~pfLP 294 (496)
T COG1003 248 VGLA-RP---GDMGFDVVHLNLHKTFCIPHGGGG-P-GAGPVGVKAHLAPFLP 294 (496)
T ss_pred hccc-cc---cccccceEEeecccccccCCCCCC-C-CCCceehHhhccccCC
Confidence 4441 23 3578999999999976 33 3 7888999987765443
No 305
>PRK06062 hypothetical protein; Provisional
Probab=98.04 E-value=0.00029 Score=78.18 Aligned_cols=96 Identities=11% Similarity=0.175 Sum_probs=59.6
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHHH-HHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCc
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWMR-IAQENDWHILIDACALG-PKD--MDSFGLSLVRPD 298 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i~-~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~D 298 (603)
.++|+++|... ..++...|.+--+...-|.+.| ++.+. +|+++|+++++|=+|.+ |.. |--.+.-...||
T Consensus 200 ~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PD 277 (451)
T PRK06062 200 LAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPD 277 (451)
T ss_pred HHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCC
Confidence 46677777531 1124444444334456799988 66554 79999999999987663 221 101111234699
Q ss_pred EEEEcccccCCCCCCc---eEEEEEeCCCCcCcC
Q 007454 299 FLICSFYQIFGENPSG---FGCLFVKKSTVPILV 329 (603)
Q Consensus 299 flv~S~hK~fG~~P~G---~G~L~vkk~~~~~L~ 329 (603)
++++ =|-+|+ | +|+++.++++++.+.
T Consensus 278 i~t~--gK~lgg---G~~Pigav~~~~~i~~~~~ 306 (451)
T PRK06062 278 LITF--AKGVNS---GYVPLGGVAISEAIAATFA 306 (451)
T ss_pred eeee--chhhhc---CCcCcEEEEEcHHHHHHhc
Confidence 7765 586663 3 799999988776554
No 306
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.03 E-value=0.0031 Score=69.45 Aligned_cols=226 Identities=14% Similarity=0.115 Sum_probs=127.5
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCccccccccc-c---HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCcE
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY-P---YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRPDF 299 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~-p---l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~Df 299 (603)
+.+++.+... ....+...|.+.-+.+.+|... | ++.+ ++|+++|+++++|=++.+ +.. |..+.--...||+
T Consensus 184 ~~l~~~~~~~-~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi 262 (421)
T PRK09792 184 DAIERLFKSD-IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDL 262 (421)
T ss_pred HHHHHHHHhc-cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcE
Confidence 6677777521 0113466666666688899765 6 3434 468999999999986553 221 1111111246996
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhh
Q 007454 300 LICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGP 379 (603)
Q Consensus 300 lv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi 379 (603)
+ ++=|.+|. ---+|+++.++++++.+.+...+++ + +..++...
T Consensus 263 ~--t~gK~l~~-G~pigav~~~~~i~~~~~~~~~~~T--------------------------------~--~gnpl~~a 305 (421)
T PRK09792 263 M--TMAKSLAG-GMPLSGVVGNANIMDAPAPGGLGGT--------------------------------Y--AGNPLAVA 305 (421)
T ss_pred E--EeehhhcC-CCceEEEEEcHHHHhccCCCCcCCC--------------------------------C--CCCHHHHH
Confidence 4 55787651 0128899998887655543111111 0 11111111
Q ss_pred hhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 007454 380 MSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPN 459 (603)
Q Consensus 380 ~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~ 459 (603)
+++ +.++++++ +...++++.+.+++.+.|..|..
T Consensus 306 aa~-----------------------------------------a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~-- 339 (421)
T PRK09792 306 AAH-----------------------------------------AVLNIIDK---ESLCERANQLGQRLKNTLIDAKE-- 339 (421)
T ss_pred HHH-----------------------------------------HHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHH--
Confidence 111 35666544 24566788888888888877631
Q ss_pred CCCCceEEEeCCCCCCCCCCEEEEEEccCCC-Cc--cCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhc
Q 007454 460 TEGNALVKIYGPKIRFDRGPALAFNVFDWKR-EK--IEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDR 536 (603)
Q Consensus 460 ~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g-~~--v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~ 536 (603)
..|.+. .+ .-+|.++.+.+.+.+. +. .....+...+-++||.+.. +
T Consensus 340 --~~p~v~--~v---rG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~---~--------------------- 388 (421)
T PRK09792 340 --SVPAIA--AV---RGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLT---C--------------------- 388 (421)
T ss_pred --hCCCcc--ee---cccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEee---c---------------------
Confidence 112221 11 2357788888865321 10 0112233333457887731 0
Q ss_pred ccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Q 007454 537 EAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLD 582 (603)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~ 582 (603)
.....+||+.+.+-.|.+||+++++.|.+.|.
T Consensus 389 --------------g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 389 --------------GAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred --------------CCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 00124899999999999999999999988763
No 307
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.02 E-value=0.009 Score=66.59 Aligned_cols=107 Identities=9% Similarity=0.114 Sum_probs=66.3
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCCCcc-C---HHHH
Q 007454 424 RGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREKI-E---PVLV 498 (603)
Q Consensus 424 ~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g~~v-~---~~~V 498 (603)
+.|+.+.+ +.+.++++.+.++|.++|.++... .|.| .|- .+|..+++.+.+.....- . ...+
T Consensus 340 a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~----~~~i~~vr------G~Gl~~~ve~~~~~~~~~~~~~~~~~~ 406 (459)
T PRK06082 340 ATIEVIEQ---EGLLEKVKADSQFMRERLLEMKAK----YPLIGDVR------GIGLLWGVELVTDRHTKERAYDEAEAV 406 (459)
T ss_pred HHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhh----CCCeeeee------eccceeEEEEccCccccCccHHHHHHH
Confidence 46776654 246678888899999999876311 1222 222 357788887753211100 0 1122
Q ss_pred HHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 007454 499 QKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 578 (603)
Q Consensus 499 ~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~ 578 (603)
...+-++||.++. ....+||++.-+..|.+||+++++.+.
T Consensus 407 ~~~~~~~Gvl~~~----------------------------------------~~~~~i~~~Ppl~it~~eid~~~~~l~ 446 (459)
T PRK06082 407 LYRCLNNGLSFKV----------------------------------------SQGNVIQLSPPLIITREELTQALAILE 446 (459)
T ss_pred HHHHHhCCCEEEe----------------------------------------cCCCEEEEeCCCccCHHHHHHHHHHHH
Confidence 2333356665531 012589999999999999999999999
Q ss_pred HHHhh
Q 007454 579 QFLDA 583 (603)
Q Consensus 579 ~~l~~ 583 (603)
+.|.+
T Consensus 447 ~~l~~ 451 (459)
T PRK06082 447 EAIAK 451 (459)
T ss_pred HHHHH
Confidence 88865
No 308
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.02 E-value=0.0014 Score=76.11 Aligned_cols=149 Identities=16% Similarity=0.139 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEe---------------------ccCchHHHHHHH-HHHcCCEEEEEeccCCc----c
Q 007454 170 GLESAMKKRIMDFLNISENDYVYD---------------------YESEAVEAMIRT-SEKRGARVMSAEFSWPR----L 223 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~---------------------~es~sV~~~~~~-a~~~Ga~V~~~~~~~~~----g 223 (603)
..+.+|-+.+|+.+|++..=++-. ..-|++.++... ..-.|++.+++...+.. |
T Consensus 174 G~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~g 253 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIG 253 (720)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCcC
Confidence 567789999999999975544221 011233333332 45579999998866521 3
Q ss_pred ccCHH-----HHHHHHhhcC-C---CCCCeeEEEEeCccccccccccHHHHH-H-HHhCCcEEEEeccccC--CCCCCCC
Q 007454 224 RINSE-----KLRKMVVSKG-K---KKKQRGLFVFPLHSRMTGARYPYLWMR-I-AQENDWHILIDACALG--PKDMDSF 290 (603)
Q Consensus 224 ~i~~~-----~L~~~l~~~~-~---~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~-a~e~g~~vlvDAaq~~--~~~m~~l 290 (603)
.|+.+ .+++.|.... . .++..++++++.- +--|+.++++.|. . ++.++ .+|+|-|..+ +- .++
T Consensus 254 ~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F--~p~ 329 (720)
T PRK13578 254 GIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQF--IPM 329 (720)
T ss_pred CCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC-cEEEeCcchhhhcc--Ccc
Confidence 35544 4888887531 1 1122477777654 4589999999764 5 68888 9999975322 11 121
Q ss_pred --CC----CCCCCc----EEEEcccccCCCCCCceEEEEEeCC
Q 007454 291 --GL----SLVRPD----FLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 291 --dl----s~~~~D----flv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
++ -..++| |++-|.||..++ -+....|-+|.+
T Consensus 330 ~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~ 371 (720)
T PRK13578 330 MADCSPLLLELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDN 371 (720)
T ss_pred cccCChhhhhcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCc
Confidence 11 135899 999999999885 666666666554
No 309
>PLN02672 methionine S-methyltransferase
Probab=97.97 E-value=0.0022 Score=77.37 Aligned_cols=147 Identities=15% Similarity=0.179 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHcCCCCC---cEEEeccCch----------------------HHHHHHHHHHcCCEEEEEeccC-Cccc
Q 007454 171 LESAMKKRIMDFLNISEN---DYVYDYESEA----------------------VEAMIRTSEKRGARVMSAEFSW-PRLR 224 (603)
Q Consensus 171 ~~~~aR~~Ia~~lna~~~---e~vf~~es~s----------------------V~~~~~~a~~~Ga~V~~~~~~~-~~g~ 224 (603)
..+..++.+++..|++.+ ++++...+.. -......++..|++++.++.+. .+..
T Consensus 735 lr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~ 814 (1082)
T PLN02672 735 PRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFK 814 (1082)
T ss_pred HHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCC
Confidence 456788888888888653 6766433221 1122344566799999998852 2356
Q ss_pred cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEecccc----CCCCCCCCCCC---
Q 007454 225 INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACAL----GPKDMDSFGLS--- 293 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq~----~~~~m~~ldls--- 293 (603)
++.++|++.+...+ .+.-+++.|. .|.||.+++.+.+ +.|+++|++|++|-+-. .+..-...++.
T Consensus 815 lD~d~Le~al~~~~---~~~I~L~nPn-hNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l 890 (1082)
T PLN02672 815 LTAKTLASTLETVK---KPWVYISGPT-INPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSIL 890 (1082)
T ss_pred CCHHHHHHHhccCC---CCEEEEECcC-CCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHH
Confidence 78899999885310 1122333343 3999999998754 35789999999998632 12100001111
Q ss_pred -CCC---C--c-EEEEcccccCCCCCCc--eEEEEEeCC
Q 007454 294 -LVR---P--D-FLICSFYQIFGENPSG--FGCLFVKKS 323 (603)
Q Consensus 294 -~~~---~--D-flv~S~hK~fG~~P~G--~G~L~vkk~ 323 (603)
.+. . . +++-|+=|-||. .| +|.++....
T Consensus 891 ~~~~~~sks~nVIvL~SfSKkf~l--pGLRIGylIap~~ 927 (1082)
T PLN02672 891 SRLKSSNPSFAVALLGGLSTELLS--GGHEFGFLALNDS 927 (1082)
T ss_pred HHhccccCCceEEEEeCcHHhhcc--HHHHheeEEeCCH
Confidence 111 1 1 345588888774 26 788877543
No 310
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=97.95 E-value=1.6e-05 Score=83.07 Aligned_cols=148 Identities=16% Similarity=0.183 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEeccC---c-------------------hHHHH---HHHHHHcCCEEEEEeccCCcc
Q 007454 169 SGLESAMKKRIMDFLNISENDYVYDYES---E-------------------AVEAM---IRTSEKRGARVMSAEFSWPRL 223 (603)
Q Consensus 169 ~~~~~~aR~~Ia~~lna~~~e~vf~~es---~-------------------sV~~~---~~~a~~~Ga~V~~~~~~~~~g 223 (603)
....+++.++|+++||.+.. +|...- | ++... -....-.|+++..++.+ ..|
T Consensus 28 D~~~~~l~~~i~~l~g~e~a--~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~-~~G 104 (290)
T PF01212_consen 28 DPTTARLEERIAELFGKEAA--LFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETGAIEELSGAKLIPLPSD-DDG 104 (290)
T ss_dssp SHHHHHHHHHHHHHHTSSEE--EEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBEC-TGT
T ss_pred ChhHHHHHHHHHHHcCCCEE--EEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccchhhHhcCcEEEECCCc-ccC
Confidence 35677899999999997533 343210 0 00000 01123368999988864 249
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccc-cccccHHHHH----HHHhCCcEEEEecccc------CCCCCCCCCC
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARYPYLWMR----IAQENDWHILIDACAL------GPKDMDSFGL 292 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~T-G~~~pl~~i~----~a~e~g~~vlvDAaq~------~~~~m~~ldl 292 (603)
.+++++|++.+.....-..++++|++...+|.. |.+||+++++ .||++|++|++|++=+ .+. ..-++
T Consensus 105 ~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~--~~~e~ 182 (290)
T PF01212_consen 105 KLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGV--SLAEI 182 (290)
T ss_dssp BB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHH--HHHHH
T ss_pred CCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccc--cHHHH
Confidence 999999999998532112368999999877754 8899998664 4799999999999733 222 11122
Q ss_pred CCCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 007454 293 SLVRPDFLICSFYQIFGENPSGFGCLFVKKST 324 (603)
Q Consensus 293 s~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~ 324 (603)
. -.+|.+.+|++|-+|. | +=++|..+++.
T Consensus 183 ~-~~~D~v~~~~tK~~g~-~-~Gavl~~~~~~ 211 (290)
T PF01212_consen 183 A-AGADSVSFGGTKNGGA-P-GGAVLAGNKEF 211 (290)
T ss_dssp H-TTSSEEEEETTSTT-S-S-SEEEEEESHHH
T ss_pred h-hhCCEEEEEEEccccc-c-cceEEEechHH
Confidence 2 4799999999998885 3 45666667664
No 311
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=97.95 E-value=0.00034 Score=75.41 Aligned_cols=96 Identities=13% Similarity=0.082 Sum_probs=76.8
Q ss_pred HHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEec
Q 007454 201 AMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDA 279 (603)
Q Consensus 201 ~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDA 279 (603)
-+.+...+.|.++..++.+ +.+++++.+. ++|.+|-+=.-+|.+..+.|++.+ ++||++|+.|+||.
T Consensus 132 ~l~~~~~~~gie~~~vd~~------~~~~~~~~i~------~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDn 199 (409)
T KOG0053|consen 132 ILRKFLPKFGGEGDFVDVD------DLKKILKAIK------ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDN 199 (409)
T ss_pred HHHHHHHHhCceeeeechh------hHHHHHHhhc------cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeC
Confidence 3556677889998888765 3566777775 379999999999999999999966 48999999999999
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEcccccCCCC
Q 007454 280 CALGPKDMDSFGLSLVRPDFLICSFYQIFGEN 311 (603)
Q Consensus 280 aq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~ 311 (603)
+=..|- -++.=.+|+|.++-|.-|+||++
T Consensus 200 Tf~~p~---~~~pL~lGADIV~hSaTKyi~Gh 228 (409)
T KOG0053|consen 200 TFGSPY---NQDPLPLGADIVVHSATKYIGGH 228 (409)
T ss_pred CcCccc---ccChhhcCCCEEEEeeeeeecCC
Confidence 866664 23333468999999999999853
No 312
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.94 E-value=0.0067 Score=67.75 Aligned_cols=227 Identities=19% Similarity=0.243 Sum_probs=126.0
Q ss_pred HHHHHHHHhhcCCCCCCeeE-EEEeCccccccccccHH-H---HH-HHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRGL-FVFPLHSRMTGARYPYL-W---MR-IAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~L-v~~~~~Sn~TG~~~pl~-~---i~-~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
.++|++.|... ..+... ++=|.+....|.+.|-. + ++ +|+++|+++++|=+|.+ |.. |--...-...|
T Consensus 201 l~~le~~~~~~---~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~P 277 (466)
T PRK07030 201 FAHMEQTLAEH---HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRP 277 (466)
T ss_pred HHHHHHHHHhC---CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCC
Confidence 34567777531 124444 44442344568866632 3 33 68999999999987653 321 11112223469
Q ss_pred cEEEEcccccCC-CC-CCceEEEEEeCCCCcCcCCCCC-CCceeccccccccccccccCCCCCCcccCcccccccccCCC
Q 007454 298 DFLICSFYQIFG-EN-PSGFGCLFVKKSTVPILVDNTS-SGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATN 374 (603)
Q Consensus 298 Dflv~S~hK~fG-~~-P~G~G~L~vkk~~~~~L~p~~~-gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~ 374 (603)
|+++++ |-+| +. | +|++.+++++++.+.+..- .|. . +-.+|.
T Consensus 278 Div~~g--Kgl~gG~~P--i~av~~~~ei~~~~~~~~~~~~~-----------------------------~--~h~~T~ 322 (466)
T PRK07030 278 DFLCLS--KALTGGYLP--LAAVLTTDTVYQAFYDDYPTLRA-----------------------------F--LHSHSY 322 (466)
T ss_pred CEEeee--hhccCCccc--ceEEEecHHHHHHHhcccccccc-----------------------------c--ccCCCC
Confidence 999984 6443 21 3 8999999887654431100 000 0 001221
Q ss_pred ChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Q 007454 375 TFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMK 454 (603)
Q Consensus 375 n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~ 454 (603)
. ..+++++ +++ +.|+.+++ +.+.++.+.+.++|.++|.+
T Consensus 323 ~-gnpla~a------------aa~-------------------------a~L~~i~~---~~l~~~~~~~G~~l~~~L~~ 361 (466)
T PRK07030 323 T-GNPLACA------------AAL-------------------------ATLDIFEQ---DNVIENNRALARRMAEATAH 361 (466)
T ss_pred C-CCHHHHH------------HHH-------------------------HHHHHHHh---cCHHHHHHHHHHHHHHHHHH
Confidence 0 1122222 011 46777665 34567888889999999887
Q ss_pred CCCCCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCCCc--c--CH---HHHHHHHhcCCcEEeeCcccCccCCchhhhh
Q 007454 455 LQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREK--I--EP---VLVQKLADRENISLSYGSLHHIWFSDKYQKE 526 (603)
Q Consensus 455 L~h~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g~~--v--~~---~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~ 526 (603)
|.. .|.| .+- -+|..+.+.+....... . .. ..+.+.+-++||.++.
T Consensus 362 l~~-----~~~v~~vr------G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~--------------- 415 (466)
T PRK07030 362 LAD-----HPHVAEVR------QTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRP--------------- 415 (466)
T ss_pred Hhc-----CCCEEEeE------eceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEe---------------
Confidence 731 1222 122 35677777774322110 0 00 1122223345655431
Q ss_pred hHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhh
Q 007454 527 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 527 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
.+ .+||+.+.+-.|.+||+.+++.+.+.|++-
T Consensus 416 -------------------------~g-~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 416 -------------------------LG-SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred -------------------------cC-CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 11 379999999999999999999999998763
No 313
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=97.93 E-value=0.018 Score=62.28 Aligned_cols=88 Identities=14% Similarity=0.169 Sum_probs=55.2
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHHH-HHHhCCcEEEEeccccC---CCCCCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWMR-IAQENDWHILIDACALG---PKDMDSFGLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i~-~a~e~g~~vlvDAaq~~---~~~m~~ldls~~~~ 297 (603)
+.+++++.+.. ++.-|.+-......|...| ++.+. +|+++|+.+++|-+|.+ |+ |.....-.+.|
T Consensus 151 d~~~l~~~i~~------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~-~~a~~~~gv~P 223 (364)
T PRK04013 151 DVEAAKEAITK------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGK-FLAIEHYKVEP 223 (364)
T ss_pred CHHHHHHHhcC------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCc-hhHHHhcCCCC
Confidence 35677777742 4555555555555676554 55554 78999999999998874 22 22222234679
Q ss_pred cEEEEcccccCCC-CCCceEEEEEeCCC
Q 007454 298 DFLICSFYQIFGE-NPSGFGCLFVKKST 324 (603)
Q Consensus 298 Dflv~S~hK~fG~-~P~G~G~L~vkk~~ 324 (603)
|.+++ =|-+|+ -| +|+++.+++.
T Consensus 224 Div~~--gK~lggG~P--~~a~~~~~~~ 247 (364)
T PRK04013 224 DIVTM--GKGIGNGVP--VSLTLTNFDV 247 (364)
T ss_pred CEEEe--cccccCCce--eEEEEecccc
Confidence 99888 475542 13 6888777654
No 314
>PRK06917 hypothetical protein; Provisional
Probab=97.92 E-value=0.012 Score=65.26 Aligned_cols=233 Identities=13% Similarity=0.197 Sum_probs=128.9
Q ss_pred HHHHHHHhhcCCCCCCe-eEEEEeCcccccccccc-HHHH----HHHHhCCcEEEEeccccC-CCCCCC---CCCCCCCC
Q 007454 228 EKLRKMVVSKGKKKKQR-GLFVFPLHSRMTGARYP-YLWM----RIAQENDWHILIDACALG-PKDMDS---FGLSLVRP 297 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t-~Lv~~~~~Sn~TG~~~p-l~~i----~~a~e~g~~vlvDAaq~~-~~~m~~---ldls~~~~ 297 (603)
+.|++.+.... .+++ .+++=|.+.+.-|.+.| -.++ ++|+++|+++++|=+|.+ |.. .. ...-...|
T Consensus 186 ~~le~~i~~~~--~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRt-G~~~a~~~~gv~P 262 (447)
T PRK06917 186 TELETAIERIG--AEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRT-GAMFAMEHWGVEP 262 (447)
T ss_pred HHHHHHHHhcC--CCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcc-cchhhHHhcCCCC
Confidence 45666665311 1233 45555666666677665 3343 258999999999987653 221 11 11123469
Q ss_pred cEEEEcccccCCC-C-CCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCC
Q 007454 298 DFLICSFYQIFGE-N-PSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 375 (603)
Q Consensus 298 Dflv~S~hK~fG~-~-P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n 375 (603)
|++++ =|.+|+ . | +|++.+++++++.+.+.. +.+ +-.+|.+
T Consensus 263 Di~~~--gK~l~~G~~P--i~a~~~~~~i~~~~~~~~--~~~-------------------------------~~~~T~~ 305 (447)
T PRK06917 263 DIMTL--GKGLGAGYTP--IAATVVSDRVMEPILRGS--RSI-------------------------------MSGHTLS 305 (447)
T ss_pred CEEEe--eehhccCCcc--eEEEEEcHHHHHHHhccC--ccc-------------------------------ccccCCC
Confidence 98776 476652 1 2 799999988765443210 100 0012211
Q ss_pred hhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC
Q 007454 376 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 455 (603)
Q Consensus 376 ~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L 455 (603)
..+++++ +++ +.|+.+++- .+.++++.+.++|.+.|.+|
T Consensus 306 -gnpl~~a------------aa~-------------------------a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l 344 (447)
T PRK06917 306 -ANPLSAA------------TAL-------------------------AVLEYMEKH---NLPEKAAEKGEYLIKGLQKV 344 (447)
T ss_pred -CCHHHHH------------HHH-------------------------HHHHHHHHC---CHHHHHHHHHHHHHHHHHHH
Confidence 0112222 011 466666543 45678888889999888877
Q ss_pred CCCCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCC--CccC-----HHHHHHHHhcCCcEEeeCcccCccCCchhhhhh
Q 007454 456 QHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKR--EKIE-----PVLVQKLADRENISLSYGSLHHIWFSDKYQKEK 527 (603)
Q Consensus 456 ~h~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g--~~v~-----~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~ 527 (603)
... .|++ .|- .+|.++.+.+.+... +... ...+.+.+-++||.++......
T Consensus 345 ~~~----~~~i~~vr------G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~----------- 403 (447)
T PRK06917 345 QQQ----STIIGDVR------GKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQ----------- 403 (447)
T ss_pred Hhc----CCCEEEEe------ecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEeccccc-----------
Confidence 421 1222 222 356677777742111 1110 1223333445788775321000
Q ss_pred HHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhh
Q 007454 528 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 528 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
......++|+++.+..|.+||+++++.+.+.|++-
T Consensus 404 ----------------------~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 404 ----------------------DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred ----------------------CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 00112589999999999999999999999998764
No 315
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=97.91 E-value=0.0012 Score=71.78 Aligned_cols=131 Identities=12% Similarity=0.150 Sum_probs=87.5
Q ss_pred HHHHHHHHcCCCCCcEEEecc-CchH-HHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCc
Q 007454 175 MKKRIMDFLNISENDYVYDYE-SEAV-EAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLH 252 (603)
Q Consensus 175 aR~~Ia~~lna~~~e~vf~~e-s~sV-~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~ 252 (603)
+...+..|+... +.++.... -... ...-...++.|.+|.+++.. +.+++.+++.+ ++|++|-+=.-
T Consensus 91 I~~~~l~ll~~G-D~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~------~~~~~~~~~~~-----~~tk~v~lEtP 158 (396)
T COG0626 91 ISTALLALLKAG-DHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG------DDEALEAAIKE-----PNTKLVFLETP 158 (396)
T ss_pred HHHHHHHhcCCC-CEEEecCCccchHHHHHHHHHHhcCeEEEEECCC------ChHHHHHHhcc-----cCceEEEEeCC
Confidence 333466677642 33433211 1111 22234456789999988754 23455555542 37999999999
Q ss_pred cccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEE
Q 007454 253 SRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFV 320 (603)
Q Consensus 253 Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~v 320 (603)
+|.+-.+.||..| ++|+++|+.|+||-+=+.|--..||+ +++|.++-|.-|.+|+.--=+|.+++
T Consensus 159 sNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~---~GaDIVvhSaTKyl~GHsDvl~G~v~ 224 (396)
T COG0626 159 SNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPLE---LGADIVVHSATKYLGGHSDVLGGVVL 224 (396)
T ss_pred CCcccccccHHHHHHHHHhcCCEEEEECCcccccccChhh---cCCCEEEEeccccccCCcceeeeEEe
Confidence 9999999999966 48999999999999866664223554 58999999999988753222555554
No 316
>PRK06105 aminotransferase; Provisional
Probab=97.90 E-value=0.0012 Score=73.55 Aligned_cols=228 Identities=14% Similarity=0.157 Sum_probs=128.3
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHHH-HHHhCCcEEEEecccc-CCCC--CCCCCCCCCCCcE
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWMR-IAQENDWHILIDACAL-GPKD--MDSFGLSLVRPDF 299 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i~-~a~e~g~~vlvDAaq~-~~~~--m~~ldls~~~~Df 299 (603)
++|+++|.... .++..-|.+--+...-|.+.| ++.+. +|+++|+++++|=+|. .|.. |--.+.....||+
T Consensus 205 ~~le~~~~~~~--~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi 282 (460)
T PRK06105 205 NELEALILAEG--PDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDI 282 (460)
T ss_pred HHHHHHHHHcC--CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCe
Confidence 56777774211 124555555334456788877 55453 7899999999998874 3321 1112223456998
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCC-CceeccccccccccccccCCCCCCcccCcccccccccCCCChhh
Q 007454 300 LICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSS-GMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 378 (603)
Q Consensus 300 lv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~g-G~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~g 378 (603)
++++ |-+|+.-.-+|+++.++++++.+.+.... |... -.+|.+ ..
T Consensus 283 ~~~g--K~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~-------------------------------h~~T~~-gn 328 (460)
T PRK06105 283 LVMS--KQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFG-------------------------------HGFTAS-GH 328 (460)
T ss_pred eeee--cccccCcccceEEEEcHHHHHHHhcccccCcccc-------------------------------cCCCCC-CC
Confidence 8764 75552000178999988876555421100 1100 011211 11
Q ss_pred hhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 007454 379 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHP 458 (603)
Q Consensus 379 i~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~ 458 (603)
+++.+ .+ .+.|+.+++ +.+.++++.+.++|.++|.+|. .
T Consensus 329 pl~~a------------aa-------------------------~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l~-~ 367 (460)
T PRK06105 329 PVAAA------------VA-------------------------LENLAIIEE---RDLVGNAAERGARLQARLRALA-D 367 (460)
T ss_pred HHHHH------------HH-------------------------HHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhh-c
Confidence 22222 01 146777765 3456788888899999998873 1
Q ss_pred CCCCCceE-EEeCCCCCCCCCCEEEEEEccCCCC--ccCH-----HHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHH
Q 007454 459 NTEGNALV-KIYGPKIRFDRGPALAFNVFDWKRE--KIEP-----VLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNV 530 (603)
Q Consensus 459 ~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g~--~v~~-----~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~ 530 (603)
.|.| .|- .+|-++.+.+...... ...+ ..+.+.+-++||.++.
T Consensus 368 ----~~~v~~vr------G~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~------------------- 418 (460)
T PRK06105 368 ----HPLVGEVR------GVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRA------------------- 418 (460)
T ss_pred ----CCCeEEEE------ecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEe-------------------
Confidence 2222 222 2566777777432211 1110 1233333456666531
Q ss_pred HHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 531 LEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 531 l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
. ..+||+++-+.-|.+||+++++.|.+.|.+
T Consensus 419 ---------------------~-g~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 419 ---------------------M-GDTLAFCPPLIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred ---------------------c-CCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 1 148999999999999999999999988865
No 317
>PRK12403 putative aminotransferase; Provisional
Probab=97.89 E-value=0.013 Score=65.45 Aligned_cols=98 Identities=18% Similarity=0.184 Sum_probs=56.9
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHHH-HHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCcE
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWMR-IAQENDWHILIDACALG-PKD--MDSFGLSLVRPDF 299 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i~-~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~Df 299 (603)
++|++.|.... ..++..|.+--+...-|.+.| ++.+. +|+++|+++++|=+|.+ |.. |-..+.-...||+
T Consensus 209 ~~le~~~~~~~--~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDi 286 (460)
T PRK12403 209 LQLEEKILELG--AENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDT 286 (460)
T ss_pred HHHHHHHHHhC--CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCe
Confidence 45655554211 124544444444555698888 76554 79999999999987743 221 1111112245999
Q ss_pred EEEcccccCCCCCCceEEEEEeCCCCcCcC
Q 007454 300 LICSFYQIFGENPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 300 lv~S~hK~fG~~P~G~G~L~vkk~~~~~L~ 329 (603)
++ +=|-+|+.-.-+|++++++++++.+.
T Consensus 287 v~--~gK~lggG~~Piga~v~~~~i~~~~~ 314 (460)
T PRK12403 287 LS--IAKGLTSGYVPMGGLVLSKRIAEALV 314 (460)
T ss_pred EE--EcccccccccceEEEEECHHHHHHHh
Confidence 97 45765520001788888887765443
No 318
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=97.88 E-value=0.0016 Score=72.25 Aligned_cols=82 Identities=12% Similarity=0.148 Sum_probs=52.1
Q ss_pred CeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCCCCC---CCCCCCCCcEEEEcccccCCC-CC
Q 007454 243 QRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKDMDS---FGLSLVRPDFLICSFYQIFGE-NP 312 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~m~~---ldls~~~~Dflv~S~hK~fG~-~P 312 (603)
++..|.+--+....|.+.| ++.+ ++|+++|+.+++|=++. .|.. .. ...-...||++++ =|-+|. .|
T Consensus 207 ~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~Grt-G~~~a~~~~gv~pDi~t~--gK~l~~G~p 283 (445)
T PRK08593 207 EVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRT-GKWSSISHFNITPDLMSF--GKSLAGGMP 283 (445)
T ss_pred ceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC-chHHHHHhcCCCCCEeee--cccccCCcc
Confidence 4666555556667898877 5545 47899999999998763 2221 11 1111346897765 475552 12
Q ss_pred CceEEEEEeCCCCcCcC
Q 007454 313 SGFGCLFVKKSTVPILV 329 (603)
Q Consensus 313 ~G~G~L~vkk~~~~~L~ 329 (603)
+|++..++++++.+.
T Consensus 284 --~gav~~~~~i~~~~~ 298 (445)
T PRK08593 284 --MSAIVGRKEIMESLE 298 (445)
T ss_pred --cEEEEEcHHHHhhhc
Confidence 789999988765553
No 319
>PLN00144 acetylornithine transaminase
Probab=97.88 E-value=0.0011 Score=71.89 Aligned_cols=216 Identities=15% Similarity=0.148 Sum_probs=126.1
Q ss_pred CHHHHHHHHhhcCCCCCCe-eEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQR-GLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVR 296 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t-~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~ 296 (603)
+.+.|++.+.. .+. .+++-|. .|..|...| ++.+ ++|+++|+++++|=++.+ +.. +.+.++..+.
T Consensus 155 d~~~l~~~~~~-----~~~aavi~eP~-q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~ 228 (382)
T PLN00144 155 NLEAARKLIQK-----GKTAAVFVEPV-QGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVE 228 (382)
T ss_pred CHHHHHHhcCC-----CCeEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCC
Confidence 57888887742 234 4555565 555555443 3333 478999999999987543 221 1122345567
Q ss_pred CcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCCh
Q 007454 297 PDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTF 376 (603)
Q Consensus 297 ~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~ 376 (603)
|| +.++=|.+|. --=+|++++++++++.+.+...+++ | +..+.
T Consensus 229 PD--i~t~sK~l~~-G~pig~v~~~~~~~~~~~~~~~~~T----------~------------------------~~~pl 271 (382)
T PLN00144 229 PD--IMTLAKPLAG-GLPIGAVLVTEKVASAINPGDHGST----------F------------------------AGGPL 271 (382)
T ss_pred CC--EEEecccccC-CcceEEEEEcHHHHhccCCCCCCCC----------C------------------------CCCHH
Confidence 99 4555686651 0128999998887765543211110 0 11111
Q ss_pred hhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCC
Q 007454 377 SGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQ 456 (603)
Q Consensus 377 ~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~ 456 (603)
...+++ +.|+++++ ..+.++++.+.++|.+.|.++-
T Consensus 272 ~~aaa~-----------------------------------------a~l~~i~~---~~~~~~~~~~g~~l~~~l~~~~ 307 (382)
T PLN00144 272 VCNAAL-----------------------------------------AVLDKISK---PGFLASVAKKGEYLRELLRRKL 307 (382)
T ss_pred HHHHHH-----------------------------------------HHHHHHhh---chHHHHHHHHHHHHHHHHHHHH
Confidence 111111 46677654 3556677777777777776542
Q ss_pred CCCCCCCce-EEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhh
Q 007454 457 HPNTEGNAL-VKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTD 535 (603)
Q Consensus 457 h~~~~g~pl-v~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~ 535 (603)
. +.|. ..+-| +|..+.+.+ +++. ..+...+.++||.+..+
T Consensus 308 ~----~~~~~~~vrg------~G~~~~l~l-~~~~-----~~~~~~~~~~Gv~i~~~----------------------- 348 (382)
T PLN00144 308 G----GNPHVKEVRG------VGLLVGIQL-DVPA-----GPLVDACRDSGLLVLTA----------------------- 348 (382)
T ss_pred h----hCCCceeeec------CceEEEEEe-cCcc-----HHHHHHHHHCCeEEeec-----------------------
Confidence 1 0121 22222 567777777 3322 23444556789887643
Q ss_pred cccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 536 REAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
. . ..+||++++..-|.+||+..++.|.+.|..
T Consensus 349 --------------~-~-~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 349 --------------G-K-GDVVRLVPPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred --------------C-C-CCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence 0 0 148999999978899999999999988753
No 320
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.85 E-value=0.002 Score=69.65 Aligned_cols=148 Identities=15% Similarity=0.216 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEec----c-----------------CchHHHHHHHHHHcCCEEEEEeccCCccccCHHH
Q 007454 171 LESAMKKRIMDFLNISENDYVYDY----E-----------------SEAVEAMIRTSEKRGARVMSAEFSWPRLRINSEK 229 (603)
Q Consensus 171 ~~~~aR~~Ia~~lna~~~e~vf~~----e-----------------s~sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~ 229 (603)
+-.+.-+.+|+|+|.+.. ++|.. + ..+...++.-|+-.|+.++...-+ +..+
T Consensus 183 ~hkelE~l~A~f~g~e~a-~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN------dm~~ 255 (519)
T KOG1357|consen 183 EHKELEELVARFLGVEDA-IVFSMGFATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN------DMQG 255 (519)
T ss_pred HHHHHHHHHHHhcCCcce-EEEeccccccccCcceeecCCcceeeccccchheeccccccCceEEEEecC------CHHH
Confidence 344666789999998544 44421 1 012233445566678888877643 3566
Q ss_pred HHHHHhh-------cCCCCCCeeEEEEeCccccccccccHH-HHHHHHhCCcEEEEeccccCCCCCCC--------CCCC
Q 007454 230 LRKMVVS-------KGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKDMDS--------FGLS 293 (603)
Q Consensus 230 L~~~l~~-------~~~~~~~t~Lv~~~~~Sn~TG~~~pl~-~i~~a~e~g~~vlvDAaq~~~~~m~~--------ldls 293 (603)
|+++|+. ++.+.-+.-++++-....+-|.+-.+. .+++.+++.+++++|.+.++|- |.+ ..+.
T Consensus 256 LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA-~g~tGrgvce~~g~d 334 (519)
T KOG1357|consen 256 LERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGA-MGATGRGVCEYFGVD 334 (519)
T ss_pred HHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccc-cCCCCcceeeccCCC
Confidence 6666652 111112445777778888899999997 5578899999999999877764 222 2233
Q ss_pred CCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcC
Q 007454 294 LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 294 ~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~ 329 (603)
...+|.+-..|-|.||. +-|.+-.++...+.|+
T Consensus 335 ~~dvDImMGtftKSfga---~GGyiagsk~lid~lr 367 (519)
T KOG1357|consen 335 PEDVDIMMGTFTKSFGA---AGGYIAGSKELIDYLR 367 (519)
T ss_pred chhheeecceehhhccc---ccceecCcHHHHhhhc
Confidence 44688999999999984 4455656666665444
No 321
>PRK07483 hypothetical protein; Provisional
Probab=97.85 E-value=0.019 Score=63.64 Aligned_cols=233 Identities=12% Similarity=0.145 Sum_probs=127.8
Q ss_pred HHHHHHHhhcCCCCCCe-eEEEEeCcccccccccc----HHHHH-HHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCc
Q 007454 228 EKLRKMVVSKGKKKKQR-GLFVFPLHSRMTGARYP----YLWMR-IAQENDWHILIDACALG-PKD--MDSFGLSLVRPD 298 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t-~Lv~~~~~Sn~TG~~~p----l~~i~-~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~D 298 (603)
++|++.+.... .+++ .+++=|.+...-|.+.| ++.++ +|+++|+++++|=+|.+ |.. |--...-...||
T Consensus 186 ~~l~~~~~~~~--~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PD 263 (443)
T PRK07483 186 DELEAKILELG--PDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPD 263 (443)
T ss_pred HHHHHHHHhcC--CCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCC
Confidence 46666564211 1234 45555666555687776 33343 68999999999987763 221 001111234699
Q ss_pred EEEEcccccCCC-C-CCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCCh
Q 007454 299 FLICSFYQIFGE-N-PSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTF 376 (603)
Q Consensus 299 flv~S~hK~fG~-~-P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~ 376 (603)
.++++ |-+|+ . | +|++++++++++.+.+.. +.+ .-.+|..
T Consensus 264 iv~~g--K~l~gG~~P--i~av~~~~~i~~~~~~~~--~~~-------------------------------~h~~T~~- 305 (443)
T PRK07483 264 LVTIA--KGLGAGYQP--IGAVLASDRIYDAIADGS--GFF-------------------------------QHGHTYL- 305 (443)
T ss_pred eeeeh--hhhccCccc--cEEEEEcHHHHHHHhcCC--Ccc-------------------------------ccCCCCC-
Confidence 98883 65442 1 2 899999988865554210 000 0011110
Q ss_pred hhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCC
Q 007454 377 SGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQ 456 (603)
Q Consensus 377 ~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~ 456 (603)
..+++++ +++ +.|+.+++ +.+.++++.+.++|.++|+++.
T Consensus 306 gnpl~~a------------aa~-------------------------a~l~~i~~---~~l~~~~~~~g~~l~~~L~~l~ 345 (443)
T PRK07483 306 GHATACA------------AAL-------------------------AVQRVIAE---DGLLANVRARGEQLRARLRERL 345 (443)
T ss_pred CCHHHHH------------HHH-------------------------HHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence 0112222 011 46666655 3456677888888888887652
Q ss_pred CCCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCC--CccC-----HHHHHHHHhcCCcEEeeCcccCccCCchhhhhhH
Q 007454 457 HPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKR--EKIE-----PVLVQKLADRENISLSYGSLHHIWFSDKYQKEKD 528 (603)
Q Consensus 457 h~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g--~~v~-----~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~ 528 (603)
. ..|+| .|- -+|-++.+.+.+.++ +..+ ...+.+.+-++||.++....+.
T Consensus 346 ~----~~~~i~~vR------G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~------------ 403 (443)
T PRK07483 346 G----QHPHVGDIR------GRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTI------------ 403 (443)
T ss_pred h----cCCCeeeEe------ecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccc------------
Confidence 1 11222 222 356677777743221 1111 1234444456788775310000
Q ss_pred HHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 529 NVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 529 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+ .....++|+.+-+.-|.+|||++++.|.+.|.+
T Consensus 404 ---------------~------~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 404 ---------------D------GVRGDHVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred ---------------c------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 011248999999999999999999999998865
No 322
>PRK08354 putative aminotransferase; Provisional
Probab=97.84 E-value=0.011 Score=62.24 Aligned_cols=130 Identities=14% Similarity=0.176 Sum_probs=78.2
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCc-hHHHHHHHHHHcCCEEEEEeccCCc--------------cccCHHHHHHHHhhcC
Q 007454 174 AMKKRIMDFLNISENDYVYDYESE-AVEAMIRTSEKRGARVMSAEFSWPR--------------LRINSEKLRKMVVSKG 238 (603)
Q Consensus 174 ~aR~~Ia~~lna~~~e~vf~~es~-sV~~~~~~a~~~Ga~V~~~~~~~~~--------------g~i~~~~L~~~l~~~~ 238 (603)
..|+.|++++| ++++.+..++ ++..+.... ..|.+|......|+. ..++.+.|++.+.
T Consensus 44 ~l~~~ia~~~~---~~I~vt~G~~~al~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~--- 116 (311)
T PRK08354 44 WLEEEFSKLFG---EPIVITAGITEALYLIGILA-LRDRKVIIPRHTYGEYERVARFFAARIIKGPNDPEKLEELVE--- 116 (311)
T ss_pred HHHHHHHHHHC---CCEEECCCHHHHHHHHHHhh-CCCCeEEEeCCCcHHHHHHHHHcCCEEeecCCCHHHHHHhhc---
Confidence 56888888887 3676665432 333333222 245444433322211 1246777877664
Q ss_pred CCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEeccc--cCCCCCCCCCCCCCCCcEEEEcccccCCCCC
Q 007454 239 KKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACA--LGPKDMDSFGLSLVRPDFLICSFYQIFGENP 312 (603)
Q Consensus 239 ~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq--~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P 312 (603)
+++++++..-+|.||..+|.+.+ +.|+++|+++++|-+- +.... ... + ..--+++-|+=|.||.
T Consensus 117 ----~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~-~~~--~-~~~vi~~~S~SK~~~l-- 186 (311)
T PRK08354 117 ----RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKP-ESP--E-GENIIKLRTFTKSYGL-- 186 (311)
T ss_pred ----CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccc-ccc--C-CCcEEEEeccHhhcCC--
Confidence 24566666668999999998633 3568899999999863 21110 111 1 2234788899999995
Q ss_pred Cc--eEEEEE
Q 007454 313 SG--FGCLFV 320 (603)
Q Consensus 313 ~G--~G~L~v 320 (603)
.| +|.++.
T Consensus 187 ~GlRiG~~v~ 196 (311)
T PRK08354 187 PGIRVGYVKG 196 (311)
T ss_pred ccceeeeeee
Confidence 36 688776
No 323
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.83 E-value=3.6e-05 Score=82.11 Aligned_cols=133 Identities=13% Similarity=0.135 Sum_probs=98.7
Q ss_pred CcEEEeccCchHHHHHHHHHHcC---CEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH
Q 007454 188 NDYVYDYESEAVEAMIRTSEKRG---ARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW 264 (603)
Q Consensus 188 ~e~vf~~es~sV~~~~~~a~~~G---a~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~ 264 (603)
.=+.|+.+. ++-++...|.--| ..+..++.+ .+|++..++|+++|...+.+.-.+-+|..++-+-|-|+.=|+..
T Consensus 197 ~lilFtSee-sHYSi~kaAa~lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~ 274 (510)
T KOG0629|consen 197 PLILFTSEE-SHYSIKKAAAFLGLGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNG 274 (510)
T ss_pred cEEEEeccc-chhhHHHHHHHhccCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHH
Confidence 344666543 3444455555556 678888888 58999999999998764333334689999999999999999996
Q ss_pred HH-HHHhCCcEEEEeccccCCCCCCCCC----CC-CCCCcEEEEcccccCCCCCCceEEEEEeCCC
Q 007454 265 MR-IAQENDWHILIDACALGPKDMDSFG----LS-LVRPDFLICSFYQIFGENPSGFGCLFVKKST 324 (603)
Q Consensus 265 i~-~a~e~g~~vlvDAaq~~~~~m~~ld----ls-~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~ 324 (603)
|+ .|+.++.++|||||-.+|- |.+.. |+ .-++|-++.+.||+.|. |.-.++++.|.+-
T Consensus 275 iadiC~k~~lWmHvDAAwGGgl-LmS~k~R~kl~Giera~SvtwnpHK~~ga-plqCsa~l~r~~g 338 (510)
T KOG0629|consen 275 IADICEKHKLWMHVDAAWGGGL-LMSRKHRHKLTGIERANSVTWNPHKLMGA-PLQCSAFLTREEG 338 (510)
T ss_pred HHHHHHhcCEEEEeeccccccc-ccChhhHhhccCccccCceeecHHHhhcC-cchhhHHHHHHHH
Confidence 65 8999999999999866654 11211 11 13689999999999998 8888888888654
No 324
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.83 E-value=0.00093 Score=79.11 Aligned_cols=219 Identities=16% Similarity=0.096 Sum_probs=132.2
Q ss_pred eEEEEeCcc-ccccccccHHHH-HHHHhCCcEEEEecc---ccCCCCCCCCCCCCCCCcEEEEccccc-----CCCCCCc
Q 007454 245 GLFVFPLHS-RMTGARYPYLWM-RIAQENDWHILIDAC---ALGPKDMDSFGLSLVRPDFLICSFYQI-----FGENPSG 314 (603)
Q Consensus 245 ~Lv~~~~~S-n~TG~~~pl~~i-~~a~e~g~~vlvDAa---q~~~~~m~~ldls~~~~Dflv~S~hK~-----fG~~P~G 314 (603)
.++++..|+ |..|.+.+++.+ .++|++|++++ +++ +++.. -+ -.++++|.++.++..+ ||+ | +
T Consensus 208 ~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~ll--~~--Pge~GADI~vG~~Q~fGvp~~~GG-P-~ 280 (954)
T PRK12566 208 AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALAC-VAADLLSLLVL--TP--PGELGADVVLGSTQRFGVPMGYGG-P-H 280 (954)
T ss_pred CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhCC--CC--hhhcCCcEEeeCCCcCCCCCCCCC-C-C
Confidence 366666666 899999999855 68999999855 443 33322 11 2468999999888764 676 4 7
Q ss_pred eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCc-ccCcccccccccCCCChhhhhhhhhhhcCccccc
Q 007454 315 FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEP-EQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQG 393 (603)
Q Consensus 315 ~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~-~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~ 393 (603)
.|++-+|+.....+.-.++|=+++ .....-+- --+++ +++ -+ .|-.|.|+-..-+|-
T Consensus 281 ag~~a~~~~~~R~~PGRivG~s~D-~~G~~a~~-------l~LqtREQH-IR---ReKAtSNICT~qaL~---------- 338 (954)
T PRK12566 281 AAYFACRDDYKRAMPGRIIGVSRD-ARGNTALR-------MALQTREQH-IR---REKANSNICTAQVLL---------- 338 (954)
T ss_pred eeeeeehHHHHhhCCCCccceeec-CCCCeeee-------hhhhHHHHH-hh---hccccchhhHHHHHH----------
Confidence 999999987765554444442221 11110000 00111 011 12 266787776543332
Q ss_pred hhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCC
Q 007454 394 EISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQV--DSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGP 471 (603)
Q Consensus 394 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~--~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp 471 (603)
++- +++=.+ =.-||.+|.+++..++.+|.++|.+. | +++...
T Consensus 339 ---A~~------------------------a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~------g---~~~~~~ 382 (954)
T PRK12566 339 ---ANI------------------------AGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK------G---IKRLNR 382 (954)
T ss_pred ---HHH------------------------HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc------C---CccccC
Confidence 221 232211 12378899999999999999999874 3 222211
Q ss_pred CCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCC
Q 007454 472 KIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKAN 551 (603)
Q Consensus 472 ~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 551 (603)
..-..+.+++ +. ....+...+...||.+|.-
T Consensus 383 ----~fF~~~~v~~-~~-----~~~~~~~~a~~~~~n~r~~--------------------------------------- 413 (954)
T PRK12566 383 ----HFFDTLTLEV-GG-----AQAAIIESAEAARINLRIL--------------------------------------- 413 (954)
T ss_pred ----CccceEEEEc-cC-----CHHHHHHHHHHCCCeeEEe---------------------------------------
Confidence 1123555555 21 1234555666678887621
Q ss_pred CCCCEEEEecCCCCCHHHHHHHHHHHH
Q 007454 552 LGITVVTASLGYLANFEDVYRLWAFVA 578 (603)
Q Consensus 552 ~~~g~VR~Slg~~tt~eDVd~l~~~l~ 578 (603)
..+.|.+||.-.+|.+||+.|++.+.
T Consensus 414 -~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 414 -GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred -CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 12479999999999999999999884
No 325
>PRK07678 aminotransferase; Validated
Probab=97.82 E-value=0.0019 Score=71.70 Aligned_cols=231 Identities=15% Similarity=0.131 Sum_probs=125.6
Q ss_pred HHHHHhhcCCCCCCee-EEEEeCcccccccccc----HHHHH-HHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCcEE
Q 007454 230 LRKMVVSKGKKKKQRG-LFVFPLHSRMTGARYP----YLWMR-IAQENDWHILIDACALG-PKD--MDSFGLSLVRPDFL 300 (603)
Q Consensus 230 L~~~l~~~~~~~~~t~-Lv~~~~~Sn~TG~~~p----l~~i~-~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~Dfl 300 (603)
+++.|... ..+++. +++=|.+. ..|.+.| ++.+. +|+++|+++++|=+|.+ |.. |--..--...||++
T Consensus 202 l~~~~~~~--~~~~iAAvi~EPiqg-~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDiv 278 (451)
T PRK07678 202 IDRVMTWE--LSETIAAVIMEPIIT-GGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDII 278 (451)
T ss_pred HHHHHHhc--CCCceEEEEEccccC-CCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEE
Confidence 55666421 112444 44445554 4788776 33443 68999999999987743 321 10111112369999
Q ss_pred EEcccccCCC--CCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhh
Q 007454 301 ICSFYQIFGE--NPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSG 378 (603)
Q Consensus 301 v~S~hK~fG~--~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~g 378 (603)
++ =|-+|+ -| +|++.+++++++.+.+....|.+ .-.+|.+- .
T Consensus 279 t~--gK~lggG~~P--i~av~~~~~i~~~~~~~~~~~~~-------------------------------~h~~T~~g-n 322 (451)
T PRK07678 279 TM--AKGITSAYLP--LSATAVKKEIYEAFKGKGEYEHF-------------------------------RHVNTFGG-N 322 (451)
T ss_pred Ee--ecccccCCcc--eeEEEEcHHHHHHHhccCccccc-------------------------------ccCCCCCc-C
Confidence 77 475542 13 89999999887655432100100 00122111 1
Q ss_pred hhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 007454 379 PMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHP 458 (603)
Q Consensus 379 i~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~ 458 (603)
+++++ +++ +.|+.+++- .+.++++.+.++|.++|.++..
T Consensus 323 p~~~a------------aa~-------------------------a~l~~l~~~---~~~~~~~~~g~~l~~~l~~~~~- 361 (451)
T PRK07678 323 PAACA------------LAL-------------------------KNLEIMENE---NLIERSAQLGELLLEQLKEELG- 361 (451)
T ss_pred HHHHH------------HHH-------------------------HHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHh-
Confidence 12222 011 467776553 4566788888888888865421
Q ss_pred CCCCCceE-EEeCCCCCCCCCCEEEEEEccCCCCc--cCH---HHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHH
Q 007454 459 NTEGNALV-KIYGPKIRFDRGPALAFNVFDWKREK--IEP---VLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLE 532 (603)
Q Consensus 459 ~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g~~--v~~---~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~ 532 (603)
..|.| .+- .+|.++.+.+....... .+. ..+...+-++||.++.. .+.
T Consensus 362 ---~~~~v~~vr------g~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~---g~~-------------- 415 (451)
T PRK07678 362 ---EHPLVGDIR------GKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKN---GDT-------------- 415 (451)
T ss_pred ---cCCCEEEEE------eeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeec---Ccc--------------
Confidence 11222 222 35778888774321111 111 22333344578877521 000
Q ss_pred hhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 533 KTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
......++|+++.+..|.+||+++++.+.+.|++
T Consensus 416 -----------------v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 416 -----------------VAGYNNVLTLSPPLVISSEEIAFIVGTLKTALER 449 (451)
T ss_pred -----------------ccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 0011248999999999999999999999988753
No 326
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.82 E-value=0.015 Score=64.73 Aligned_cols=227 Identities=14% Similarity=0.156 Sum_probs=125.0
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEE-eCccccccccc-cHHHHH----HHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVF-PLHSRMTGARY-PYLWMR----IAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~-~~~Sn~TG~~~-pl~~i~----~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
.+++++.|... ..+..-|.+ |.+....|.+. |-.++. +|+++|+++++|=+|.+ |.. |--.+.-...|
T Consensus 210 ~~~l~~~l~~~---~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~P 286 (460)
T PRK06916 210 LEELEELLKEK---HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTP 286 (460)
T ss_pred HHHHHHHHHhC---CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCC
Confidence 44566666521 124444444 53445568765 444442 58999999999987653 221 11111223469
Q ss_pred cEEEEcccccCC-CC-CCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCC
Q 007454 298 DFLICSFYQIFG-EN-PSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 375 (603)
Q Consensus 298 Dflv~S~hK~fG-~~-P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n 375 (603)
|++++ =|-+| +. | +|++.+++++++.+.+..-+.. .+ +-.+|.+
T Consensus 287 Div~~--gK~l~gG~~P--i~av~~~~ei~~~~~~~~~~~~----------------------------~~--~~~~T~~ 332 (460)
T PRK06916 287 DIMTA--GKGLTGGYLP--IAITVTTDEIYNAFYGDYEEQK----------------------------TF--FHGHSYT 332 (460)
T ss_pred Ceeee--ehhhhcCccc--cceeeecHHHHHHhhccccccC----------------------------cc--ccCCCCC
Confidence 99876 47443 21 2 8999999887654432110000 00 0112211
Q ss_pred hhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC
Q 007454 376 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 455 (603)
Q Consensus 376 ~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L 455 (603)
- .+++++ +++ +.|+.+++- .+.++++.+.++|.+.|.+|
T Consensus 333 g-npl~~a------------aa~-------------------------a~l~~l~~~---~l~~~~~~~g~~l~~~l~~l 371 (460)
T PRK06916 333 G-NPLGCA------------VAL-------------------------ANLELYEKT---NLIEQVARKTEYVATQLEDL 371 (460)
T ss_pred C-CHHHHH------------HHH-------------------------HHHHHHHhc---cHHHHHHHHHHHHHHHHHHh
Confidence 0 122222 011 467766553 35678889999999999887
Q ss_pred CCCCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCC--CccC-----HHHHHHHHhcCCcEEeeCcccCccCCchhhhhh
Q 007454 456 QHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKR--EKIE-----PVLVQKLADRENISLSYGSLHHIWFSDKYQKEK 527 (603)
Q Consensus 456 ~h~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g--~~v~-----~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~ 527 (603)
.. .|.| .+- -+|-++.+.+.+.+. +... ...+...+-++||.++.
T Consensus 372 ~~-----~~~v~~vr------G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~---------------- 424 (460)
T PRK06916 372 FA-----LKHVGDIR------QLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRP---------------- 424 (460)
T ss_pred hc-----CCCeEEee------cCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEe----------------
Confidence 41 1222 222 356677777753221 1100 11233333446666531
Q ss_pred HHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 528 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 528 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
.+ .++|+.+.+-.|.+||+++++.|.+.|.+
T Consensus 425 ------------------------~g-~~l~~~Ppl~it~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 425 ------------------------LG-NTIVFMPPLASTIDELDEMLRILYKAISD 455 (460)
T ss_pred ------------------------cC-CEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 11 38999999999999999999999998864
No 327
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=97.81 E-value=0.012 Score=68.35 Aligned_cols=146 Identities=12% Similarity=0.060 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEec---------------------cCchHHHHHHHHHHcCCEEEEEeccCCc----cc
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDY---------------------ESEAVEAMIRTSEKRGARVMSAEFSWPR----LR 224 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~---------------------es~sV~~~~~~a~~~Ga~V~~~~~~~~~----g~ 224 (603)
..+.+|-+.+|+.+|++..=|+-.= .-|++.++...+.-.|++.+++...+.. |.
T Consensus 195 G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g~ 274 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGG 274 (713)
T ss_pred hHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcCC
Confidence 5667888999999999755442210 1122333334455578898888765421 23
Q ss_pred cCH-----HHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEE-EEeccccCCCC-CCC--CCCCC
Q 007454 225 INS-----EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHI-LIDACALGPKD-MDS--FGLSL 294 (603)
Q Consensus 225 i~~-----~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~v-lvDAaq~~~~~-m~~--ldls~ 294 (603)
|+. +.++++|...... ++.+.++++.- +--|+.+++++|. .+ |+.+ |+|-|..+ |- ..+ -+.+.
T Consensus 275 I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhga-h~~F~p~~~~~sa 348 (713)
T PRK15399 275 IPRREFTRDSIEEKVAATTQA-QWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWVP-YTHFHPIYQGKSG 348 (713)
T ss_pred CChhhccHHHHHHHHHhCCCc-CCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccchh-hhhcCcccCCcCh
Confidence 455 8889998753221 22345555544 5689999999775 55 6666 79976332 10 011 11122
Q ss_pred C----CCcEE---EEcccccCCCCCCceEEEEEeC
Q 007454 295 V----RPDFL---ICSFYQIFGENPSGFGCLFVKK 322 (603)
Q Consensus 295 ~----~~Dfl---v~S~hK~fG~~P~G~G~L~vkk 322 (603)
+ ++|.+ +-|.||..++ -+....|-||.
T Consensus 349 m~~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~ 382 (713)
T PRK15399 349 MSGERVPGKVIFETQSTHKMLAA-FSQASLIHIKG 382 (713)
T ss_pred hhCCCCCCeeeeeeeehhccccc-cchheeeeecC
Confidence 1 45666 9999999886 77777777754
No 328
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.81 E-value=0.01 Score=62.83 Aligned_cols=180 Identities=17% Similarity=0.164 Sum_probs=105.9
Q ss_pred CCCCCCCHHHHHHHhcCCCCCCCCCCCCCCCCccccccccccccCccccccchH--HHHHHHHHHHHHHHcCCCCCcE--
Q 007454 115 FGIGLFSYNQLHKQESSPSHLRPSLPSQNLDIPFFSVSYKTGNLKTQLLHGGQE--SGLESAMKKRIMDFLNISENDY-- 190 (603)
Q Consensus 115 aa~tl~~~~v~~a~~~~~~~~~~~~p~~~~~~p~f~~s~~~aN~~s~~~~g~~~--~~~~~~aR~~Ia~~lna~~~e~-- 190 (603)
|+-...+.+|+++.-..+++- |++ +-|.... ||+.. .+++.-+++|.++.|+.+|+.+
T Consensus 47 aSENFts~aVmeAlGS~ltNK-------YSE----------GyPG~RY-YGGne~ID~iE~LCq~RALeaF~ldp~kWGV 108 (477)
T KOG2467|consen 47 ASENFTSRAVMEALGSCLTNK-------YSE----------GYPGARY-YGGNEYIDQIELLCQKRALEAFGLDPEKWGV 108 (477)
T ss_pred ecccchHHHHHHHHhHHhhcc-------ccc----------CCCcccc-cCcchHHHHHHHHHHHHHHHHhCCCHHHCce
Confidence 444456889999977665532 211 3343333 45443 5677778999999999999866
Q ss_pred -EEecc-CchHHHHHHHHHH----------------------cCCEEEE--E-------eccCCccccCHHHHHHHHhhc
Q 007454 191 -VYDYE-SEAVEAMIRTSEK----------------------RGARVMS--A-------EFSWPRLRINSEKLRKMVVSK 237 (603)
Q Consensus 191 -vf~~e-s~sV~~~~~~a~~----------------------~Ga~V~~--~-------~~~~~~g~i~~~~L~~~l~~~ 237 (603)
|-.+. |.+-..+-...-+ .+-+|.- + .++..+|-||.+.|++.-..
T Consensus 109 NVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~- 187 (477)
T KOG2467|consen 109 NVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATL- 187 (477)
T ss_pred eeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHh-
Confidence 11111 1111110000000 0111111 1 13445789999999986542
Q ss_pred CCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCC---C--CCCCCCCCCCCcEEEEcccccCCCC
Q 007454 238 GKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPK---D--MDSFGLSLVRPDFLICSFYQIFGEN 311 (603)
Q Consensus 238 ~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~---~--m~~ldls~~~~Dflv~S~hK~fG~~ 311 (603)
=+++|++.-.-+ --..+||..++ +|.+.|+++++|.++.-|- . ..|++ .+|.++.+-||-+-+
T Consensus 188 ----frPk~iiaG~Sa--Y~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe----y~DiVTTTTHKsLRG- 256 (477)
T KOG2467|consen 188 ----FRPKLIIAGTSA--YSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE----YCDIVTTTTHKSLRG- 256 (477)
T ss_pred ----cCCcEEEecccc--chhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc----ccceeeccccccccC-
Confidence 145666654332 12357787775 7899999999996543221 0 02554 489999999997755
Q ss_pred CCceEEEEEeCCCC
Q 007454 312 PSGFGCLFVKKSTV 325 (603)
Q Consensus 312 P~G~G~L~vkk~~~ 325 (603)
|. -|.+|.||.+.
T Consensus 257 PR-g~mIFyRkGvk 269 (477)
T KOG2467|consen 257 PR-GAMIFYRKGVK 269 (477)
T ss_pred Cc-ceeEEEeccCC
Confidence 76 47778888875
No 329
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=97.81 E-value=0.0029 Score=69.81 Aligned_cols=226 Identities=13% Similarity=0.094 Sum_probs=126.8
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCccccccccc-cHHH---H-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCc
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARY-PYLW---M-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRPD 298 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~-pl~~---i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~D 298 (603)
.++|++.+.......+-..+++-|.++| +|.+. |-++ + ++|+++|+++++|=++.+ +.. |-..+.....||
T Consensus 183 ~~~l~~~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pD 261 (425)
T PRK07495 183 LAALDKLFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAAD 261 (425)
T ss_pred HHHHHHHHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCC
Confidence 3445666642101112235666677776 88654 4443 3 368999999999987652 221 111222234688
Q ss_pred EEEEcccccCCC-CCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 299 FLICSFYQIFGE-NPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 299 flv~S~hK~fG~-~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
++++ =|.+|. -| +|++..++++++.+.+...+++ | +..++.
T Consensus 262 i~tl--sK~l~~G~p--igav~~~~~i~~~~~~~~~~~T----------~------------------------~~~pl~ 303 (425)
T PRK07495 262 LTTM--AKGLAGGFP--LAAVTGRAEIMDAPGPGGLGGT----------Y------------------------GGNPLG 303 (425)
T ss_pred EEee--hhhhcCCcc--ceEEEEcHHHHhccCCCCcCCC----------C------------------------CCCHHH
Confidence 7665 576551 12 7889998887665543211110 0 111111
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
..+++ ++++++++ +.+.++++.+.++|.++|+++..
T Consensus 304 ~aaa~-----------------------------------------a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~ 339 (425)
T PRK07495 304 IAAAH-----------------------------------------AVLDVIEE---EDLCERANQLGNRLKQRLASLRE 339 (425)
T ss_pred HHHHH-----------------------------------------HHHHHHHh---chHHHHHHHHHHHHHHHHHHHHh
Confidence 11111 46777654 35677888888999988887642
Q ss_pred CCCCCCce-EEEeCCCCCCCCCCEEEEEEccCCCCccCH---HHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHh
Q 007454 458 PNTEGNAL-VKIYGPKIRFDRGPALAFNVFDWKREKIEP---VLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEK 533 (603)
Q Consensus 458 ~~~~g~pl-v~Iygp~~~~~rg~ivsFnv~~~~g~~v~~---~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~ 533 (603)
. .|. ..|.| +|-.+.+.+.+.+...-.. ..+.+.+-++|+.++..
T Consensus 340 ~----~~~i~~vrG------~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~--------------------- 388 (425)
T PRK07495 340 T----VPEIADIRG------PGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC--------------------- 388 (425)
T ss_pred h----CCCeeeeec------CceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec---------------------
Confidence 1 122 22333 3667777775432110011 22334444577776421
Q ss_pred hhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 534 TDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
.....+||+.+-+.-|.+|||.+++.|.+.|.+
T Consensus 389 -----------------g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 389 -----------------GVHGNVIRFLAPITIQDDVFAEALDILEASILE 421 (425)
T ss_pred -----------------CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 001158999999999999999999999988754
No 330
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=97.78 E-value=0.0039 Score=72.37 Aligned_cols=146 Identities=12% Similarity=0.058 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEec---------------------cCchHHHHHHHHHHcCCEEEEEeccCCc----cc
Q 007454 170 GLESAMKKRIMDFLNISENDYVYDY---------------------ESEAVEAMIRTSEKRGARVMSAEFSWPR----LR 224 (603)
Q Consensus 170 ~~~~~aR~~Ia~~lna~~~e~vf~~---------------------es~sV~~~~~~a~~~Ga~V~~~~~~~~~----g~ 224 (603)
..+.+|-+.+|+.+|++..=++-.= .-|++.++...+.-.|++.++++..+.. +.
T Consensus 195 G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~ 274 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGG 274 (714)
T ss_pred hHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccC
Confidence 5677899999999999755442210 1122333334455678999998766522 23
Q ss_pred cC-----HHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HHHhCCcEEEEeccccCCCC-CCC-C-CCCC-
Q 007454 225 IN-----SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IAQENDWHILIDACALGPKD-MDS-F-GLSL- 294 (603)
Q Consensus 225 i~-----~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a~e~g~~vlvDAaq~~~~~-m~~-l-dls~- 294 (603)
|+ .+.+++.|...... ++...++++. ++--|+.+++++|. .++.++ +|+|-|..+ +- ..+ + +.+.
T Consensus 275 I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~-pTYdG~~yd~~~I~~~~~~~~--ilvDEAwga-h~~F~p~~~~~sam 349 (714)
T PRK15400 275 IPQSEFQHATIAKRVKETPNA-TWPVHAVITN-STYDGLLYNTDFIKKTLDVKS--IHFDSAWVP-YTNFSPIYEGKCGM 349 (714)
T ss_pred CCccccCHHHHHHHHHhCccc-cCccEEEEEC-CCCccEecCHHHHHHHhCCCC--EEEEccchh-hhccCcccCCcChh
Confidence 45 78999999753221 1222455544 36689999999774 788777 689976322 20 001 1 1111
Q ss_pred -CCC---c--EEEEcccccCCCCCCceEEEEEe
Q 007454 295 -VRP---D--FLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 295 -~~~---D--flv~S~hK~fG~~P~G~G~L~vk 321 (603)
.+. | |++-|.||..++ -+....|-||
T Consensus 350 ~~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvk 381 (714)
T PRK15400 350 SGGRVEGKVIYETQSTHKLLAA-FSQASMIHVK 381 (714)
T ss_pred hcCCCCCCceEEEEchhhcccc-hhHHhHHHHc
Confidence 234 5 999999999875 5555555443
No 331
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=97.78 E-value=0.00082 Score=74.08 Aligned_cols=98 Identities=9% Similarity=0.074 Sum_probs=66.8
Q ss_pred ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccc-cccccH---HHH-HHHHhCCcEEEEeccccCCCC-C--------
Q 007454 222 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARYPY---LWM-RIAQENDWHILIDACALGPKD-M-------- 287 (603)
Q Consensus 222 ~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~T-G~~~pl---~~i-~~a~e~g~~vlvDAaq~~~~~-m-------- 287 (603)
++.+|.++|++.|..+ ..++++|+.+....|.. |...|+ +.+ ++|+++|+.|++|||++.+-. +
T Consensus 158 tgnlD~d~Le~~I~~~--~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y 235 (460)
T PRK13237 158 KGNVDLDKLQALIDEV--GAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGY 235 (460)
T ss_pred CCCcCHHHHHHHhccc--cCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhccccccc
Confidence 6889999999999742 12467777777777888 566654 444 478999999999999887721 0
Q ss_pred CCCCCC------CCCCcEEEEcccccCCCCCCceEEEEEeCC
Q 007454 288 DSFGLS------LVRPDFLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 288 ~~ldls------~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
..-.+. -...|.+++|+||-++. |. =|++..+++
T Consensus 236 ~~~~i~ei~~e~~s~aD~~t~S~~K~~~~-~~-GG~i~t~D~ 275 (460)
T PRK13237 236 QDKSIKEIVHEMFSYADGCTMSGKKDCLV-NI-GGFLAMNDE 275 (460)
T ss_pred CCCcHhHHhhhccCcCcEEEEeCCCCCCC-CC-ceEEEECCH
Confidence 011111 12479999999998875 43 255555543
No 332
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=97.77 E-value=0.0019 Score=70.17 Aligned_cols=112 Identities=14% Similarity=0.100 Sum_probs=75.1
Q ss_pred HHHHHcCCEEEEEec-cCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH----HHHHHhCCcEEEEe
Q 007454 204 RTSEKRGARVMSAEF-SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW----MRIAQENDWHILID 278 (603)
Q Consensus 204 ~~a~~~Ga~V~~~~~-~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~----i~~a~e~g~~vlvD 278 (603)
..++..|++++.++. +..+..++.++|++.+... .+++.++++|.-+|.||..++-+. ++.|++++++++.|
T Consensus 135 ~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~D 211 (396)
T PRK09257 135 AIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQA---PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLD 211 (396)
T ss_pred HHHHHcCCcEEEEeccccccCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEe
Confidence 345667999998886 2223578999999888631 124688888999999999999873 24578999999999
Q ss_pred ccc-cCCCC----CCCC-CCCCCC-CcEEEEcccccCCCCCCc--eEEEEE
Q 007454 279 ACA-LGPKD----MDSF-GLSLVR-PDFLICSFYQIFGENPSG--FGCLFV 320 (603)
Q Consensus 279 Aaq-~~~~~----m~~l-dls~~~-~Dflv~S~hK~fG~~P~G--~G~L~v 320 (603)
-+- -...+ ..++ .+.... -=+++.||=|.|| |.| +|.+++
T Consensus 212 e~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~--~~GlRiG~~~~ 260 (396)
T PRK09257 212 IAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFG--LYGERVGALSV 260 (396)
T ss_pred ccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCc--cccccceeEEE
Confidence 752 11110 0010 011111 1267899999999 656 677764
No 333
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=97.74 E-value=0.0013 Score=71.93 Aligned_cols=83 Identities=19% Similarity=0.200 Sum_probs=47.9
Q ss_pred CeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEecc---ccCCCCCCCCCCCCCCCcEEEEccccc------CCCCC
Q 007454 243 QRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDAC---ALGPKDMDSFGLSLVRPDFLICSFYQI------FGENP 312 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAa---q~~~~~m~~ldls~~~~Dflv~S~hK~------fG~~P 312 (603)
++.-|.+..- |..|.+-+++.| .++|++|+.+++ ++ ++++. -.-.++|+|.++.+ ||- ||+ |
T Consensus 197 ~~a~v~vq~P-n~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l----~~Pge~GADI~vg~-~Q~fg~p~~~GG-P 268 (429)
T PF02347_consen 197 DTAAVMVQNP-NTFGVFEDIKEIADIAHAAGALVIV-GADPNALGGL----KSPGEYGADIVVGE-HQTFGIPMGFGG-P 268 (429)
T ss_dssp TEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC------GGGGT-SEEEEC-CTTTT---CCC--S
T ss_pred CeEEEEeecC-CCCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCc----CChhhcCccEEeeC-CCCCcccCCCCC-C
Confidence 5666666554 579999999866 589999999877 43 33332 11236799999666 774 455 3
Q ss_pred CceEEEEEeCCCCcCcCCCCCC
Q 007454 313 SGFGCLFVKKSTVPILVDNTSS 334 (603)
Q Consensus 313 ~G~G~L~vkk~~~~~L~p~~~g 334 (603)
|.|++-+|+.....+.-.++|
T Consensus 269 -~~G~~a~~~~l~r~lPGRiVG 289 (429)
T PF02347_consen 269 -GAGFFAVREDLVRQLPGRIVG 289 (429)
T ss_dssp ---EEEEE-GGGGGGS-S-EEE
T ss_pred -CeeeEEEhhhhhhhCCCceec
Confidence 788999999977666544443
No 334
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=97.73 E-value=0.0026 Score=69.74 Aligned_cols=106 Identities=15% Similarity=-0.004 Sum_probs=67.9
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHh
Q 007454 424 RGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLAD 503 (603)
Q Consensus 424 ~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad 503 (603)
+.|+.+++ +.+.++++.+.++|.++|.+|... .+.+ +.- ..+|.++.+.+.....+ . ...+.+.+.
T Consensus 298 a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~----~~~i---~~v--rg~Gl~~~i~~~~~~~~-~-a~~i~~~l~ 363 (408)
T PRK04612 298 VALRKLAS---PQIAANVARQSAALRAGLEALNAE----FGVF---AQV--RGRGLMLGAVLAPAHAG-Q-AGAILDLAA 363 (408)
T ss_pred HHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhh----CCCe---eee--eccceEEEEEecCchhh-H-HHHHHHHHH
Confidence 46666654 356678888888998888876421 1212 111 23577777777431111 1 123444455
Q ss_pred cCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 504 RENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 504 ~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
++||.+.. .+..+||+.+.+.-|.+||+++++.+.+.|.+
T Consensus 364 ~~Gvlv~~----------------------------------------~g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 364 EHGLLLLQ----------------------------------------AGPDVLRFVPALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred HCCeEEee----------------------------------------CCCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 67877631 01158999999999999999999999988864
No 335
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.72 E-value=0.031 Score=62.53 Aligned_cols=95 Identities=14% Similarity=0.222 Sum_probs=56.9
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEE-eCccccccccccHH-HH----HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVF-PLHSRMTGARYPYL-WM----RIAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~-~~~Sn~TG~~~pl~-~i----~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
.+.+++.+... ..++.-|.+ |.+....|.+.|-. ++ ++|+++|+.+++|=+|.+ |.. |--.+.-...|
T Consensus 223 ~~~l~~~~~~~---~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~P 299 (472)
T PRK08742 223 ADALQALFEQS---PGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMP 299 (472)
T ss_pred HHHHHHHHHhC---CCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCC
Confidence 35566666421 124554444 43455678866533 43 268999999999987763 321 11122223569
Q ss_pred cEEEEcccccCCC-C-CCceEEEEEeCCCCcCc
Q 007454 298 DFLICSFYQIFGE-N-PSGFGCLFVKKSTVPIL 328 (603)
Q Consensus 298 Dflv~S~hK~fG~-~-P~G~G~L~vkk~~~~~L 328 (603)
|+++++ |-+|+ . | +|++++++++++.+
T Consensus 300 Div~~g--Kgl~gG~~P--laav~~~~ei~~~~ 328 (472)
T PRK08742 300 DLLCLS--KGLTGGFLP--LSAVLATQQLYDAF 328 (472)
T ss_pred CEEEEc--ccccCCCCC--cceeeccHHHHHHh
Confidence 999984 75542 1 3 79999998876544
No 336
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.70 E-value=0.0034 Score=69.31 Aligned_cols=75 Identities=13% Similarity=0.082 Sum_probs=46.0
Q ss_pred HHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCC--CCCCCCCCCCCcE
Q 007454 228 EKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKD--MDSFGLSLVRPDF 299 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~--m~~ldls~~~~Df 299 (603)
+++++.+... ..++..|.+.-+....|.+.| ++.+ ++|+++|+++++|-+|. +|.. |-..+.....||+
T Consensus 206 ~~~~~~~~~~---~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi 282 (431)
T TIGR03251 206 RQARAAFAER---PHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDI 282 (431)
T ss_pred HHHHHHHHhC---CCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCE
Confidence 3444555421 235777777666677888753 2334 36899999999999877 3431 0012222357999
Q ss_pred EEEccc
Q 007454 300 LICSFY 305 (603)
Q Consensus 300 lv~S~h 305 (603)
++++-.
T Consensus 283 ~~~gK~ 288 (431)
T TIGR03251 283 VAFGKK 288 (431)
T ss_pred EEeccc
Confidence 987544
No 337
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=97.69 E-value=0.0017 Score=71.77 Aligned_cols=97 Identities=15% Similarity=0.185 Sum_probs=61.5
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HH-HHHHhCCcEEEEeccccCC-C-CCCCCCCCCCCCc
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WM-RIAQENDWHILIDACALGP-K-DMDSFGLSLVRPD 298 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i-~~a~e~g~~vlvDAaq~~~-~-~m~~ldls~~~~D 298 (603)
+.++|++.|... .++...|++-.+....|.+.|.. .+ ++|+++|+.+++|=++.+- . .|.....-...||
T Consensus 187 d~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv~PD 263 (433)
T PRK00615 187 DFQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHVKPD 263 (433)
T ss_pred CHHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCCCCC
Confidence 467888888632 13455666655555679888854 44 4789999999999887421 1 0111111224699
Q ss_pred EEEEcccccCCC-CCCceEEEEEeCCCCcCcC
Q 007454 299 FLICSFYQIFGE-NPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 299 flv~S~hK~fG~-~P~G~G~L~vkk~~~~~L~ 329 (603)
++++ =|.+|+ .| +|++..++++++.+.
T Consensus 264 i~~~--gK~lggG~p--~~av~~~~~i~~~~~ 291 (433)
T PRK00615 264 ITVY--GKILGGGLP--AAAVVAHKSIMDHLA 291 (433)
T ss_pred eEEE--cccccCCcc--eeeeeecHHHHhhhc
Confidence 9874 687662 12 788888988876554
No 338
>PRK07481 hypothetical protein; Provisional
Probab=97.69 E-value=0.0057 Score=67.97 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=52.6
Q ss_pred CeeEEEEeCcccccccccc----HHHHH-HHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCcEEEEcccccCCC-C-C
Q 007454 243 QRGLFVFPLHSRMTGARYP----YLWMR-IAQENDWHILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGE-N-P 312 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~p----l~~i~-~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~Dflv~S~hK~fG~-~-P 312 (603)
++.-|.+--+....|.+.| ++.+. +|+++|+++++|=+|.+ |.. |--...-...||+++++ |.+|+ . |
T Consensus 213 ~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~P 290 (449)
T PRK07481 213 TIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYVP 290 (449)
T ss_pred cEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEe--ecccCCCcC
Confidence 4555555555666788776 34443 68999999999977653 221 11112223469998884 75542 0 2
Q ss_pred CceEEEEEeCCCCcCcC
Q 007454 313 SGFGCLFVKKSTVPILV 329 (603)
Q Consensus 313 ~G~G~L~vkk~~~~~L~ 329 (603)
+|++++++++++.+.
T Consensus 291 --i~av~~~~~i~~~~~ 305 (449)
T PRK07481 291 --LGATMVNARIADAFE 305 (449)
T ss_pred --ceEEEEcHHHHHHHh
Confidence 799999988776554
No 339
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.68 E-value=0.0088 Score=66.77 Aligned_cols=93 Identities=16% Similarity=0.267 Sum_probs=53.2
Q ss_pred HHHHHHHHhhcCCCCCCee-EEEEeCcccccccccc-HHHH---H-HHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRG-LFVFPLHSRMTGARYP-YLWM---R-IAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~-Lv~~~~~Sn~TG~~~p-l~~i---~-~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
.+.+++.|........++. +++=|.+ ..-|.+.| -.++ . +|+++|+++++|=+|.+ |.. |--.+.-...|
T Consensus 215 ~~~l~~~i~~~~~~~~~iAAvI~EPiq-g~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~P 293 (464)
T PRK06938 215 LHYLENLLDDPESGVVLPAAVILEVVQ-GEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIP 293 (464)
T ss_pred HHHHHHHHHhhccCCCceEEEEEcccc-CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCC
Confidence 4567777753111112344 4444544 44587665 3343 3 68999999999987653 221 11111123469
Q ss_pred cEEEEcccccCC-CCCCceEEEEEeCCC
Q 007454 298 DFLICSFYQIFG-ENPSGFGCLFVKKST 324 (603)
Q Consensus 298 Dflv~S~hK~fG-~~P~G~G~L~vkk~~ 324 (603)
|.++++ |.+| +.| +|+++.+++.
T Consensus 294 Div~~g--KglggG~P--lsAv~~~~~~ 317 (464)
T PRK06938 294 DVVVLS--KAIGGSLP--LAVVVYREWL 317 (464)
T ss_pred CEEEee--ccccCCCc--eEEEeehhHh
Confidence 999985 6433 223 8999988764
No 340
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.65 E-value=0.0059 Score=67.14 Aligned_cols=99 Identities=11% Similarity=0.068 Sum_probs=59.5
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCc
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRPD 298 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~D 298 (603)
.+.+++.+... ...++...|.+--+...+|.+.| ++.+ ++|+++|+++++|=++.+ +.. +-.++-....||
T Consensus 182 ~~~~~~~~~~~-~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pD 260 (420)
T TIGR00700 182 LAAARAIFVID-VGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPD 260 (420)
T ss_pred HHHHHHHHHhh-cCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCC
Confidence 34566665311 01235666666556667899887 5544 478999999999976542 221 111222234699
Q ss_pred EEEEcccccCCCCCCceEEEEEeCCCCcCcC
Q 007454 299 FLICSFYQIFGENPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 299 flv~S~hK~fG~~P~G~G~L~vkk~~~~~L~ 329 (603)
.++ +=|-+|. --=+|++++++++++.+.
T Consensus 261 i~~--lsK~l~~-G~pig~v~~~~~i~~~~~ 288 (420)
T TIGR00700 261 LIT--TAKSLAD-GLPLSGVTGRAEIMDAPA 288 (420)
T ss_pred EEE--eeccccC-CcceEEEEecHHHHhhcC
Confidence 765 5686651 112799999888765554
No 341
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=97.62 E-value=0.0022 Score=70.56 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=72.9
Q ss_pred HHcCCEEEEEecc---------CCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccc-cccccH---HHH-HHHHhCC
Q 007454 207 EKRGARVMSAEFS---------WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMT-GARYPY---LWM-RIAQEND 272 (603)
Q Consensus 207 ~~~Ga~V~~~~~~---------~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~T-G~~~pl---~~i-~~a~e~g 272 (603)
+..|+.+.-++.+ ..+|.+|+++|++.|..+. ..++.|+++....|.. |...|+ +.+ ++|+++|
T Consensus 127 e~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~--~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~G 204 (450)
T TIGR02618 127 EKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVG--ADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHG 204 (450)
T ss_pred HhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc--CcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcC
Confidence 4567765555322 1258899999999997421 2245677777667765 788775 434 3689999
Q ss_pred cEEEEeccccCCCCCC-------CCCCCC--------CCCcEEEEcccccCCCCCCceEEEEE-eC
Q 007454 273 WHILIDACALGPKDMD-------SFGLSL--------VRPDFLICSFYQIFGENPSGFGCLFV-KK 322 (603)
Q Consensus 273 ~~vlvDAaq~~~~~m~-------~ldls~--------~~~Dflv~S~hK~fG~~P~G~G~L~v-kk 322 (603)
+.|++|||++.+-... -.|.+. ..+|.+++|+||-+|. |. |.+++ ++
T Consensus 205 l~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~-~~--GG~l~~~d 267 (450)
T TIGR02618 205 IKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLV-NI--GGFLCMND 267 (450)
T ss_pred CEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCC-CC--ceEEEeCC
Confidence 9999999988742100 112111 2589999999998887 54 55555 44
No 342
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=97.58 E-value=0.0069 Score=66.85 Aligned_cols=224 Identities=13% Similarity=0.113 Sum_probs=127.2
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeC-cccccccccc-HHH---H-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCC
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPL-HSRMTGARYP-YLW---M-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRP 297 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~-~Sn~TG~~~p-l~~---i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~ 297 (603)
.+++++++... .++...|.+-- .+..-|.+.| ..+ + ++|+++|+.+++|=++.+ |.. |-..+.....|
T Consensus 194 ~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~p 270 (427)
T TIGR00508 194 ITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVP 270 (427)
T ss_pred HHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCC
Confidence 45666777531 12455555544 3666676553 333 3 368999999999987643 221 10111223479
Q ss_pred cEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChh
Q 007454 298 DFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFS 377 (603)
Q Consensus 298 Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~ 377 (603)
|++++ =|.+|+--.-++++.+++++++.+..... +.. .-.+|.. .
T Consensus 271 Di~~~--gK~l~gG~~p~~a~~~~~~~~~~~~~~~~-~~~-------------------------------~~~~T~~-g 315 (427)
T TIGR00508 271 DILCV--GKALTGGYMTLSATVTTDKVAQTISSGEA-GCF-------------------------------MHGPTFM-G 315 (427)
T ss_pred CEEEe--chhhhcCcccceEEEEcHHHHHHHhcCCC-Ccc-------------------------------ccCCCCC-c
Confidence 98874 67654200014778888777655542100 000 0011110 0
Q ss_pred hhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCC
Q 007454 378 GPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQH 457 (603)
Q Consensus 378 gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h 457 (603)
.++++++ ++ ++|+.+.+- ...++++.+.++|.++|+++..
T Consensus 316 ~p~~~aa------------a~-------------------------a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~ 355 (427)
T TIGR00508 316 NPLACAV------------AE-------------------------ASLAILLEG---EWQKQVSAIENQLKRELSPLRK 355 (427)
T ss_pred CHHHHHH------------HH-------------------------HHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhc
Confidence 1222220 11 477776653 3457888899999999988741
Q ss_pred CCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcc
Q 007454 458 PNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDRE 537 (603)
Q Consensus 458 ~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~ 537 (603)
.|.+ +. . ..+|.++.+.+.+.. .+..+.+.+.++||.++..
T Consensus 356 -----~~~i---~~-v-rg~G~~~~i~~~~~~----~~~~~~~~l~~~Gv~~~~~------------------------- 396 (427)
T TIGR00508 356 -----NPVV---KD-V-RVLGAIGVVEMYKPV----NVEELQKKFVEQGVWIRPF------------------------- 396 (427)
T ss_pred -----CCCE---Ee-E-eccccEEEEEECCcc----CHHHHHHHHHHCCeEEEec-------------------------
Confidence 1212 11 1 235889999886421 2334444455678776410
Q ss_pred cccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 538 AKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 538 ~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
..++|+++....|.+|||++++.+.+.|.+
T Consensus 397 ----------------~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 397 ----------------GKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred ----------------CCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 137999999999999999999999998754
No 343
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.57 E-value=0.0043 Score=69.15 Aligned_cols=102 Identities=12% Similarity=0.153 Sum_probs=63.4
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCc-eEE-EeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHH
Q 007454 424 RGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNA-LVK-IYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKL 501 (603)
Q Consensus 424 ~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~p-lv~-Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~L 501 (603)
+.|+.+++ +.+..+++.+.++|.++|.++.. ..| .|. +-| ..+|.++.+.+.+. + + ...+.+.
T Consensus 360 a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~----~~~~~i~~vRg----~G~Glm~gie~~~~--~-~-~~~i~~~ 424 (464)
T TIGR00699 360 EIIQEIKR---KDLLENVAHVGDYLYTGLEDLQK----KYPEFIQNLRG----KGRGTFIAWDTPDE--A-K-RDKLLKK 424 (464)
T ss_pred HHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH----hCCCceeeecc----cCeEEEEEEecCCH--H-H-HHHHHHH
Confidence 46666654 34556777777788888877631 012 221 111 13688888887542 1 1 1233344
Q ss_pred HhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHH
Q 007454 502 ADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQF 580 (603)
Q Consensus 502 ad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~ 580 (603)
+-++||.++.. +..+||+++.+..|.+||+.+++.|.+.
T Consensus 425 ~~~~Gvl~~~~----------------------------------------g~~~ir~~Ppl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 425 ARNNGVNIGGC----------------------------------------GVKAIRLRPMLVFQKHHADIFLEIISKI 463 (464)
T ss_pred HHHCCcEEecC----------------------------------------CCCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 44568876421 1148999999999999999999998765
No 344
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=97.53 E-value=0.016 Score=61.94 Aligned_cols=111 Identities=15% Similarity=0.136 Sum_probs=72.0
Q ss_pred HHHcCCEEEEEe-ccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH-HHHH---HHhCCcEEEEecc
Q 007454 206 SEKRGARVMSAE-FSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRI---AQENDWHILIDAC 280 (603)
Q Consensus 206 a~~~Ga~V~~~~-~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~-~i~~---a~e~g~~vlvDAa 280 (603)
.+..|.+|..-| ++..+..++.+.+-..|..- ..+.-++-=..+.|.||...+.+ |..+ .+++||..++|-|
T Consensus 137 f~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a---~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~A 213 (396)
T COG1448 137 FEAAGLEVETYPYYDAETKGLDFDGMLADLKTA---PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIA 213 (396)
T ss_pred HHhcCCceeeeeccccccccccHHHHHHHHHhC---CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehh
Confidence 345688886544 45455668888777777631 12333333345569999999997 8764 5899999999987
Q ss_pred -ccCCCCCCCCCCCC--------CCC-cEEEEcccccCCCCCCceEEEEEeC
Q 007454 281 -ALGPKDMDSFGLSL--------VRP-DFLICSFYQIFGENPSGFGCLFVKK 322 (603)
Q Consensus 281 -q~~~~~m~~ldls~--------~~~-Dflv~S~hK~fG~~P~G~G~L~vkk 322 (603)
|-.+. -++-+. .++ =|++.||-|-||-+-.-+|++.+--
T Consensus 214 YQGF~~---GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva 262 (396)
T COG1448 214 YQGFAD---GLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVA 262 (396)
T ss_pred hhhhcc---chHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEe
Confidence 66664 233221 233 5677788898874444589887753
No 345
>PRK06149 hypothetical protein; Provisional
Probab=97.53 E-value=0.0071 Score=73.43 Aligned_cols=212 Identities=12% Similarity=0.135 Sum_probs=121.5
Q ss_pred CeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-CCCCCCC-C-CC--CCCCCcEEEEcccccCCC-C
Q 007454 243 QRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-GPKDMDS-F-GL--SLVRPDFLICSFYQIFGE-N 311 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-~~~~m~~-l-dl--s~~~~Dflv~S~hK~fG~-~ 311 (603)
++..|.+--+....|.+.| ++.+ ++|+++|+.+++|=+|. .|. +.. + .. ....||.+++ =|-+|. .
T Consensus 744 ~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGR-tG~~~~a~e~~gv~PDivt~--gK~lg~G~ 820 (972)
T PRK06149 744 GLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGR-LGHYFWGFEQQGVVPDIITM--AKGMGNGH 820 (972)
T ss_pred ceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCc-cCccchhhhhcCCCCCEEEe--cccccCCe
Confidence 4544444334445688888 6755 47999999999998874 232 122 1 11 1246999866 475552 1
Q ss_pred CCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccc
Q 007454 312 PSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLE 391 (603)
Q Consensus 312 P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~ 391 (603)
| +|++++++++++.+.+. |.. + . . + .| .++...+++
T Consensus 821 P--l~av~~~~~i~~~~~~~---~~~---------~--s--------------T---~-~g-nP~~~aaal--------- 856 (972)
T PRK06149 821 P--LGAVITRREIAEALEAE---GYF---------F--S--------------S---T-GG-SPVSCRIGM--------- 856 (972)
T ss_pred e--eEEEEEcHHHHhhhccC---Ccc---------c--C--------------C---C-CC-CHHHHHHHH---------
Confidence 2 79999999887655431 100 0 0 0 0 11 112222222
Q ss_pred cchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCC
Q 007454 392 QGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGP 471 (603)
Q Consensus 392 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp 471 (603)
+.|+.+++ +.+.++++.+.++|.++|.+|.. ..|+|...
T Consensus 857 --------------------------------a~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~----~~~~i~~v-- 895 (972)
T PRK06149 857 --------------------------------AVLDVLRE---EKLQENARRVGDHLKARLEALAD----RHPLIGAV-- 895 (972)
T ss_pred --------------------------------HHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEE--
Confidence 46676654 34667788888888888887631 01222111
Q ss_pred CCCCCCCCEEEEEEccCCCCc-cC---HHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccc
Q 007454 472 KIRFDRGPALAFNVFDWKREK-IE---PVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRK 547 (603)
Q Consensus 472 ~~~~~rg~ivsFnv~~~~g~~-v~---~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 547 (603)
.-+|-.+.+.+....... -. ...+.+.+-++||.++..
T Consensus 896 ---rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~----------------------------------- 937 (972)
T PRK06149 896 ---HGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT----------------------------------- 937 (972)
T ss_pred ---eecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeec-----------------------------------
Confidence 135677777774211100 01 112333333467776521
Q ss_pred cCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 548 DKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 548 ~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+....+||+..-+-.|.+||+.+++.|.+.|.+
T Consensus 938 ---g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 938 ---GDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred ---CCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 011248999999999999999999999998864
No 346
>PRK05965 hypothetical protein; Provisional
Probab=97.48 E-value=0.01 Score=66.09 Aligned_cols=226 Identities=16% Similarity=0.181 Sum_probs=127.5
Q ss_pred HHHHHHHhhcCCCCCCee-EEEEeCccccccccccH-HHHH----HHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCc
Q 007454 228 EKLRKMVVSKGKKKKQRG-LFVFPLHSRMTGARYPY-LWMR----IAQENDWHILIDACALG-PKD--MDSFGLSLVRPD 298 (603)
Q Consensus 228 ~~L~~~l~~~~~~~~~t~-Lv~~~~~Sn~TG~~~pl-~~i~----~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~D 298 (603)
++|++.|.... .++.. +++=| +....|.+.|- .++. +|+++|+++++|=+|.+ |.. |--.+.-...||
T Consensus 202 ~~l~~~i~~~~--~~~iAAvIvEP-iqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PD 278 (459)
T PRK05965 202 AALRAKVAELG--ADNVAAFFCEP-IQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPD 278 (459)
T ss_pred HHHHHHHHhcC--CCceEEEEEec-cccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCC
Confidence 46777775311 12344 44445 44557876654 3442 58999999999987664 221 111112234699
Q ss_pred EEEEcccccCCC-C-CCceEEEEEeCCCCcCcCCCCC-CCceeccccccccccccccCCCCCCcccCcccccccccCCCC
Q 007454 299 FLICSFYQIFGE-N-PSGFGCLFVKKSTVPILVDNTS-SGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 375 (603)
Q Consensus 299 flv~S~hK~fG~-~-P~G~G~L~vkk~~~~~L~p~~~-gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n 375 (603)
.++++ |-+|+ . | +|++++++++++.+.+..- .|.+ .-.+|-+
T Consensus 279 iv~~g--Kgl~gG~~P--i~av~~~~~i~~~~~~~~~~~~~~-------------------------------~h~~T~~ 323 (459)
T PRK05965 279 LMTVA--KGLTSGYVP--MGAVLMSDHVYQGIADGAGAAAPV-------------------------------GHGYTYS 323 (459)
T ss_pred eEEec--hhhccCCcc--eeEEEEcHHHHHHHhccccccccc-------------------------------cccCCCC
Confidence 99985 75442 1 2 8999999988755432100 0000 0011211
Q ss_pred hhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC
Q 007454 376 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 455 (603)
Q Consensus 376 ~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L 455 (603)
..+++.+ +++ +.|+.+++ +.+.++++.+.++|.++|.+|
T Consensus 324 -gnpl~~A------------aa~-------------------------a~L~~l~~---~~l~~~~~~~g~~l~~~l~~l 362 (459)
T PRK05965 324 -AHPVSAA------------VGL-------------------------EVLRLYHE---GGLLANGQKAGPRFAAGLDAL 362 (459)
T ss_pred -CCHHHHH------------HHH-------------------------HHHHHHHh---ccHHHHHHHHHHHHHHHHHhh
Confidence 1122222 011 46666654 345667888889999999877
Q ss_pred CCCCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCC--CccC-----HHHHHHHHhcCCcEEeeCcccCccCCchhhhhh
Q 007454 456 QHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKR--EKIE-----PVLVQKLADRENISLSYGSLHHIWFSDKYQKEK 527 (603)
Q Consensus 456 ~h~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g--~~v~-----~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~ 527 (603)
.. .|.| .| ..+|.++.+.+..... +... ...+...+-++||.++.
T Consensus 363 ~~-----~~~v~~v------rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~---------------- 415 (459)
T PRK05965 363 RA-----HPLVGDV------RGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRA---------------- 415 (459)
T ss_pred cc-----CCCEEEE------eecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEe----------------
Confidence 41 1222 12 2357777777743211 1101 11233334456777641
Q ss_pred HHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 528 DNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 528 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
.+..+||+.+.+-.|.+||+++++.|.+.|+.
T Consensus 416 ------------------------~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 416 ------------------------FGDGVLGFAPALCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred ------------------------cCCcEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 01147999999999999999999999998875
No 347
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.47 E-value=0.0072 Score=66.61 Aligned_cols=208 Identities=15% Similarity=0.171 Sum_probs=120.0
Q ss_pred eEEEEeCcccccccccc-HHHH----HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCcEEEEcccccCC-CCCCce
Q 007454 245 GLFVFPLHSRMTGARYP-YLWM----RIAQENDWHILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFG-ENPSGF 315 (603)
Q Consensus 245 ~Lv~~~~~Sn~TG~~~p-l~~i----~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~Dflv~S~hK~fG-~~P~G~ 315 (603)
.+++=|.+....|.+.| -+++ ++|+++|+++++|=+|.+ |.. |.........||++++ =|.+| +.+ =+
T Consensus 203 Avi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~--gK~l~gG~~-p~ 279 (422)
T PRK05630 203 AIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCV--GKALTGGFM-SF 279 (422)
T ss_pred EEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeee--echhhcCcc-cc
Confidence 44444543455787655 3343 268999999999987653 221 1111222356999965 58663 211 16
Q ss_pred EEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchh
Q 007454 316 GCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEI 395 (603)
Q Consensus 316 G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i 395 (603)
|++++++++++.+......|.. . -.+|.. ..+++++
T Consensus 280 ~av~~~~~i~~~~~~~~~~~~~---------~----------------------h~~T~~-g~Pla~a------------ 315 (422)
T PRK05630 280 AATLCTDKVAQLISTPNGGGAL---------M----------------------HGPTFM-ANPLACA------------ 315 (422)
T ss_pred ceeeccHHHHHHHhccCCCCcc---------c----------------------cCCCCc-CCHHHHH------------
Confidence 8888888876655422100100 0 011111 1122221
Q ss_pred HHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceE-EEeCCCCC
Q 007454 396 SEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIR 474 (603)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv-~Iygp~~~ 474 (603)
+. .++|+.+++- ...++++.+.++|.+.|..|.. .|.| .|
T Consensus 316 -aa------------------------~aaL~~l~~~---~~~~~~~~~g~~l~~~L~~l~~-----~~~v~~v------ 356 (422)
T PRK05630 316 -VA------------------------HASLEIIETG---MWRKQVKRIEAELIAGLSPLAH-----LPGVADV------ 356 (422)
T ss_pred -HH------------------------HHHHHHHHhC---cHHHHHHHHHHHHHHHHHHhhc-----CCCeeee------
Confidence 01 1467777653 3355788888888888876531 1222 11
Q ss_pred CCCCCEEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCC
Q 007454 475 FDRGPALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGI 554 (603)
Q Consensus 475 ~~rg~ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 554 (603)
.-+|.++++.+.+.. ....+...+-++||.++.. +
T Consensus 357 Rg~Gl~~~ie~~~~~----~~~~~~~~~~~~Gl~~~~~----------------------------------------g- 391 (422)
T PRK05630 357 RVLGAIGVVEMEQPV----DMEEATQAAVDHGVWLRPF----------------------------------------G- 391 (422)
T ss_pred eccccEEEEEECCcc----cHHHHHHHHHHCCeEEEec----------------------------------------C-
Confidence 136889999886531 1233444555678876420 1
Q ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 555 TVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 555 g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
.+||+.+.+-.|.+||+++++.|.+.|.+
T Consensus 392 ~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 392 RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 48999999999999999999999988754
No 348
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=97.47 E-value=0.013 Score=64.84 Aligned_cols=209 Identities=13% Similarity=0.210 Sum_probs=118.1
Q ss_pred CeeEEEEeCcccccccc-ccHHHH----HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCcEEEEcccccCCC-CCC
Q 007454 243 QRGLFVFPLHSRMTGAR-YPYLWM----RIAQENDWHILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGE-NPS 313 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~-~pl~~i----~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~Dflv~S~hK~fG~-~P~ 313 (603)
-..+++-|.+.+- |.+ .|-+.+ ++|+++|+++++|=+|.+ |.. |-...--...||.+++ =|-+|. -|
T Consensus 207 iaavi~Epi~g~~-G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~~G~P- 282 (442)
T TIGR00709 207 PAAVILEAIQGEG-GVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVM--SKAVGGGLP- 282 (442)
T ss_pred eEEEEEccccCCC-CCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEE--cccccCCcc-
Confidence 3566777766654 554 565433 368999999999987653 221 1111112356999885 575542 13
Q ss_pred ceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccc
Q 007454 314 GFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQG 393 (603)
Q Consensus 314 G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~ 393 (603)
+|+++++++ ++.+.+...+++ + .| .++...+++
T Consensus 283 -igav~~~~~-~~~~~~~~~~~T----------~-----------------------~g-npla~aaa~----------- 315 (442)
T TIGR00709 283 -LAVLLIAPE-FDAWQPAGHTGT----------F-----------------------RG-NQLAMVTGT----------- 315 (442)
T ss_pred -cEEEEEchH-HhccCCCcCCCC----------C-----------------------Cc-CHHHHHHHH-----------
Confidence 889998877 333321111110 0 00 111111111
Q ss_pred hhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceE-EEeCCC
Q 007454 394 EISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPK 472 (603)
Q Consensus 394 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv-~Iygp~ 472 (603)
++|+.+++- .+.++++.+.++|.++|.+|... .|.| .+-
T Consensus 316 ------------------------------a~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~----~~~v~~vr--- 355 (442)
T TIGR00709 316 ------------------------------EALNYWKDD---NLAQNAQERGERITSFLDDMIKE----HPCIGNVR--- 355 (442)
T ss_pred ------------------------------HHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHh----CCCeeeee---
Confidence 466666543 45568888888888888876311 1222 221
Q ss_pred CCCCCCCEEEEEEccCCCCc-----c--C---HHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccccc
Q 007454 473 IRFDRGPALAFNVFDWKREK-----I--E---PVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKS 542 (603)
Q Consensus 473 ~~~~rg~ivsFnv~~~~g~~-----v--~---~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~ 542 (603)
.+|-.+++.+.+..... . + ...+...+-++||.++.+
T Consensus 356 ---G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~------------------------------ 402 (442)
T TIGR00709 356 ---GRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETG------------------------------ 402 (442)
T ss_pred ---ccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeec------------------------------
Confidence 35777787774321100 0 0 112333334567766421
Q ss_pred ccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 543 DNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 543 ~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
.....+||+.+.+-.|.+||+++++.+.+.|.+
T Consensus 403 --------~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 403 --------GREGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred --------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 011258999999999999999999999998875
No 349
>PRK06148 hypothetical protein; Provisional
Probab=97.46 E-value=0.014 Score=71.16 Aligned_cols=211 Identities=16% Similarity=0.197 Sum_probs=121.2
Q ss_pred CeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC---CCCCCCCCCCCcEEEEcccccCC-CCC
Q 007454 243 QRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD---MDSFGLSLVRPDFLICSFYQIFG-ENP 312 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~---m~~ldls~~~~Dflv~S~hK~fG-~~P 312 (603)
.+.-|.+--+...-|.+.| ++.+ ++|+++|+.+++|=+|.+ |.. |--.......||++++ =|.+| +.|
T Consensus 784 ~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~--gK~lggG~P 861 (1013)
T PRK06148 784 GPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTM--GKPIGNGHP 861 (1013)
T ss_pred ceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeee--cccccCCcc
Confidence 3444444334445688777 5545 478999999999988753 320 1111122346999887 47543 223
Q ss_pred CceEEEEEeCCCCcCcCCCC-CCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccc
Q 007454 313 SGFGCLFVKKSTVPILVDNT-SSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLE 391 (603)
Q Consensus 313 ~G~G~L~vkk~~~~~L~p~~-~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~ 391 (603)
+|+++.++++++.+.+.. ++++ + |-.++.-.+++
T Consensus 862 --lgav~~~~ei~~~~~~g~~~~~T----------f------------------------~gnpla~aaa~--------- 896 (1013)
T PRK06148 862 --MGAVVTTREIADSFDNGMEYFNT----------F------------------------GGNPVSCAIGL--------- 896 (1013)
T ss_pred --eEEEEEcHHHHhhccCCCccccC----------C------------------------CCCHHHHHHHH---------
Confidence 899999998876554310 0010 0 00112212221
Q ss_pred cchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceE-EEeC
Q 007454 392 QGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYG 470 (603)
Q Consensus 392 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv-~Iyg 470 (603)
+.|+.+++ +.+.++++.+.++|.++|.+|... .|+| .|-|
T Consensus 897 --------------------------------a~L~~i~~---e~l~~~~~~~G~~l~~~L~~l~~~----~~~i~~VrG 937 (1013)
T PRK06148 897 --------------------------------AVLDIIED---EDLQRNALEIGNYLLAGLRELQDR----FDIIGDVRG 937 (1013)
T ss_pred --------------------------------HHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHh----CCCceEEee
Confidence 46666654 356677888888888888877311 1222 2222
Q ss_pred CCCCCCCCCEEEEEEccCCCCcc-CH---HHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhccccccccccc
Q 007454 471 PKIRFDRGPALAFNVFDWKREKI-EP---VLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNR 546 (603)
Q Consensus 471 p~~~~~rg~ivsFnv~~~~g~~v-~~---~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 546 (603)
+|-.+.+.+...+.... .. ..+...+-++||.++..
T Consensus 938 ------~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---------------------------------- 977 (1013)
T PRK06148 938 ------MGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTE---------------------------------- 977 (1013)
T ss_pred ------eceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEecc----------------------------------
Confidence 46677777643211110 11 12222233467776421
Q ss_pred ccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 547 KDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 547 ~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
+....+||+.+.+..|.+|||++++.|.+.|.+
T Consensus 978 ----g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 978 ----GPHDNVLKIRPPLIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred ----CCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 011258999999999999999999999998865
No 350
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=97.45 E-value=0.013 Score=65.35 Aligned_cols=211 Identities=12% Similarity=0.139 Sum_probs=119.2
Q ss_pred CeeEEEEeCccccccccccH-HHH----HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCcEEEEcccccCCCCCCc
Q 007454 243 QRGLFVFPLHSRMTGARYPY-LWM----RIAQENDWHILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSG 314 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~pl-~~i----~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~Dflv~S~hK~fG~~P~G 314 (603)
++.-|.+--+....|.+.|- .++ ++|+++|+.+++|=+|.+ |.. |-..+.-...||++++ =|-+|+ -.+
T Consensus 222 ~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~--gK~l~g-G~p 298 (457)
T PRK05639 222 EVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIF--GKGVAS-GMG 298 (457)
T ss_pred ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEEe--chhhcC-CCc
Confidence 45555544455557887663 333 368999999999987653 211 0011112346999984 586542 124
Q ss_pred eEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccch
Q 007454 315 FGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGE 394 (603)
Q Consensus 315 ~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~ 394 (603)
+|+++.++++++ .. .|.. .. . + .| .+....+++
T Consensus 299 i~av~~~~~i~~-~~----~~~~--------~~-----------------T---~-~g-~p~~~aaa~------------ 331 (457)
T PRK05639 299 LSGVIGRKELMD-LT----SGSA--------LL-----------------T---P-AA-NPVISAAAE------------ 331 (457)
T ss_pred ceeEEehHHHHh-hc----CCCc--------cc-----------------C---C-Cc-CHHHHHHHH------------
Confidence 799999988865 21 1110 00 0 0 11 111111111
Q ss_pred hHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceE-EEeCCCC
Q 007454 395 ISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKI 473 (603)
Q Consensus 395 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv-~Iygp~~ 473 (603)
+.|+.+.+ +.+.++.+.+.++|.++|.+|.. +.|++ .|-
T Consensus 332 -----------------------------a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~----~~~~~~~Vr---- 371 (457)
T PRK05639 332 -----------------------------ATLEIIEE---ENLLKNALKVGEFIKKRLLEMKE----SFEVIGDVR---- 371 (457)
T ss_pred -----------------------------HHHHHHHH---ccHHHHHHHHHHHHHHHHHHHHH----hCCCEEeec----
Confidence 46666654 34556777788888888887632 11222 222
Q ss_pred CCCCCCEEEEEEccCCCCccCH---HHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCC
Q 007454 474 RFDRGPALAFNVFDWKREKIEP---VLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKA 550 (603)
Q Consensus 474 ~~~rg~ivsFnv~~~~g~~v~~---~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 550 (603)
-+|-++.+.+.+..... ++ ..+.+.+-++||.++..
T Consensus 372 --G~Gl~~gve~~~~~~~~-~~~~~~~~~~~~~~~Gv~~~~~-------------------------------------- 410 (457)
T PRK05639 372 --GKGLMIGVEIVKENGKP-DPELTGKICWRAFELGLILPSY-------------------------------------- 410 (457)
T ss_pred --cceeEEEEEEecCCCCC-CHHHHHHHHHHHHhCCeEEeec--------------------------------------
Confidence 35667777664322111 11 12333334567776421
Q ss_pred CCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhh
Q 007454 551 NLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 551 ~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
.....+||+++.+-.|.+|||++++.+.+.+..-
T Consensus 411 g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 411 GMFGNVIRITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred CCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 0112489999999999999999999999998763
No 351
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.45 E-value=0.0023 Score=65.49 Aligned_cols=218 Identities=16% Similarity=0.205 Sum_probs=132.1
Q ss_pred CeeEEEEeCccccccccccHHHHHHHHhCCcEEEEeccc-cCCCCCCCCCCCCCCCcEEEEcccccCCCCCCceEEEEEe
Q 007454 243 QRGLFVFPLHSRMTGARYPYLWMRIAQENDWHILIDACA-LGPKDMDSFGLSLVRPDFLICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 243 ~t~Lv~~~~~Sn~TG~~~pl~~i~~a~e~g~~vlvDAaq-~~~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G~G~L~vk 321 (603)
+...|-+.+---+.|+-.+- +..---+|...+.|.++ +..+ |+|++++ +.+.....|-.| |.|+-+.+||
T Consensus 148 da~yvyyCaNETVHGVEf~~--~P~~~~~~~vlVaDmSSnflSr---pvDvsk~--gvi~aGAQKN~G--~aG~Tvvivr 218 (370)
T KOG2790|consen 148 DASYVYYCANETVHGVEFDF--IPVNDPKGAVLVADMSSNFLSR---PVDVSKF--GVIFAGAQKNVG--PAGVTVVIVR 218 (370)
T ss_pred CccEEEEecCceeeceecCC--CCCCCCCCceEEEecccchhcC---Cccchhc--ceEEeccccccC--ccccEEEEEe
Confidence 34455555444445554331 11112367888899875 4454 9999985 567788999999 9999999999
Q ss_pred CCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCChhhhhhhhhhhcCccccchhHHHhhh
Q 007454 322 KSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNTFSGPMSIEMRQSGKLEQGEISEVRRA 401 (603)
Q Consensus 322 k~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n~~gi~gl~~~~~~~~~~~~i~~~~~~ 401 (603)
++++....+..- ++ ..++. ..+. .. .--|++..+|..++
T Consensus 219 ~dllg~~~~~tP--~v---~dyk~---~~~N-----------nS----lyNTpP~f~iy~~~------------------ 257 (370)
T KOG2790|consen 219 KDLLGNALDITP--SV---LDYKI---MDKN-----------NS----LYNTPPCFGIYVMG------------------ 257 (370)
T ss_pred hhhhcccccCCc--cc---cceee---eccc-----------cc----cccCCCeeeeeehh------------------
Confidence 999754332110 00 01110 0110 01 24678888887776
Q ss_pred hhhhhhhhccCCCCCCCchhHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeCCCCCC-CCCC
Q 007454 402 EADSIQQKNANTNGGGGSEIECRGLDQVDSL-GLTMISRRGRCLINWLVNALMKLQHPNTEGNALVKIYGPKIRF-DRGP 479 (603)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~ald~~~~i-Gl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv~Iygp~~~~-~rg~ 479 (603)
..++++.+- |+..+++....=...|++.|.+-+ |. .+-|-++. +.-=
T Consensus 258 ----------------------Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~-----gf----y~cpVe~~~RS~M 306 (370)
T KOG2790|consen 258 ----------------------LVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSN-----GF----YRCPVEPSVRSRM 306 (370)
T ss_pred ----------------------hHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcC-----Ce----EEcccchhhhhhc
Confidence 577776555 688888888888889999997532 21 11232222 2234
Q ss_pred EEEEEEccCCCCccCHHHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEE
Q 007454 480 ALAFNVFDWKREKIEPVLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTA 559 (603)
Q Consensus 480 ivsFnv~~~~g~~v~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~ 559 (603)
.|.|.+.+. .+..+.+.+.+.++=|++ + +.+..|.+|+
T Consensus 307 NV~Fri~~d---~Le~eFLkeA~~~~mv~L------------------------K---------------GhRSVGGiRA 344 (370)
T KOG2790|consen 307 NVPFRIEKD---ELEAEFLKEAAKEHMVQL------------------------K---------------GHRSVGGIRA 344 (370)
T ss_pred ccceeecch---HHHHHHHHHHHHhhhhcc------------------------c---------------cccccccchh
Confidence 577777642 122233333332222221 1 3455689999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 560 SLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 560 Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
|+=---+.+++++|++|+++|...
T Consensus 345 SlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 345 SLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred hhhccccHHHHHHHHHHHHHHHHh
Confidence 998888999999999999999653
No 352
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=97.43 E-value=0.013 Score=64.49 Aligned_cols=97 Identities=8% Similarity=0.137 Sum_probs=57.4
Q ss_pred HHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCc
Q 007454 227 SEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRPD 298 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~D 298 (603)
.++|++.+.... ..++...|.+--....-|.+.| ++.+ ++|+++|+++++|=++.+ +.. +..++.....||
T Consensus 184 ~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pd 262 (425)
T PRK08088 184 IASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAAD 262 (425)
T ss_pred HHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCC
Confidence 445777775211 1124555555444444566665 4433 478999999999987553 221 112223334577
Q ss_pred EEEEcccccCCCCCCc--eEEEEEeCCCCcCcC
Q 007454 299 FLICSFYQIFGENPSG--FGCLFVKKSTVPILV 329 (603)
Q Consensus 299 flv~S~hK~fG~~P~G--~G~L~vkk~~~~~L~ 329 (603)
+ .|+=|.+| | | +|++..++++++.+.
T Consensus 263 i--~s~sK~l~--~-G~rig~v~~~~~~~~~~~ 290 (425)
T PRK08088 263 L--TTFAKSIA--G-GFPLAGVTGRAEVMDAIA 290 (425)
T ss_pred E--EEEecccc--C-CCcceeeEecHHHHhhcC
Confidence 4 66789887 3 4 699998877765554
No 353
>PLN02397 aspartate transaminase
Probab=97.36 E-value=0.011 Score=65.10 Aligned_cols=112 Identities=12% Similarity=0.086 Sum_probs=74.4
Q ss_pred HHHHHHcCCEEEEEec-cCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEE
Q 007454 203 IRTSEKRGARVMSAEF-SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILI 277 (603)
Q Consensus 203 ~~~a~~~Ga~V~~~~~-~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlv 277 (603)
...++..|+++..++. +..+..++.+.+++.+... ++++++++++.-+|.||.+++.+.+ .+|+++|++|+.
T Consensus 156 ~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~ 232 (423)
T PLN02397 156 HNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFF 232 (423)
T ss_pred HHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEE
Confidence 3445667999999887 2123568889888887632 2368999999999999999998733 357889999999
Q ss_pred ecc--ccC--CC--CCCCC-CCCCCCCc-EEEEcccccCCCCCCc--eEEEE
Q 007454 278 DAC--ALG--PK--DMDSF-GLSLVRPD-FLICSFYQIFGENPSG--FGCLF 319 (603)
Q Consensus 278 DAa--q~~--~~--~m~~l-dls~~~~D-flv~S~hK~fG~~P~G--~G~L~ 319 (603)
|-+ .+. +. ...++ .+...+.. +++.||=|.|| +.| +|.++
T Consensus 233 De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~--~~G~RvG~~v 282 (423)
T PLN02397 233 DSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMG--LYGERVGALS 282 (423)
T ss_pred ecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCC--CccccceEEE
Confidence 965 222 10 00011 11111112 55679999999 557 58775
No 354
>PRK08297 L-lysine aminotransferase; Provisional
Probab=97.35 E-value=0.0075 Score=66.92 Aligned_cols=103 Identities=15% Similarity=0.119 Sum_probs=65.9
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceE--EEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHH
Q 007454 424 RGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV--KIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKL 501 (603)
Q Consensus 424 ~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv--~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~L 501 (603)
+.|+.+.+ +.+.++++.+.++|.++|.++... .|.+ .+- .+|.++.+.+.+.. ....+.+++
T Consensus 337 a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~----~~~~~~~vr------g~G~~~~i~~~~~~---~~~~~~~~l 400 (443)
T PRK08297 337 RILEVIEE---DGLVENAARQGEYLLARLEELAAE----FPAVVSNVR------GRGLMCAFDLPTTA---DRDEVIRRL 400 (443)
T ss_pred HHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHH----CCCcceeee------ccceEEEEEecCHH---HHHHHHHHH
Confidence 45665544 355667888888888888776310 1211 222 25788888886421 112233334
Q ss_pred HhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Q 007454 502 ADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFL 581 (603)
Q Consensus 502 ad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l 581 (603)
-++||.+..+ +..++|+++.+..|.+||+++++.|.+.+
T Consensus 401 -~~~Gvl~~~~----------------------------------------~~~~lr~~P~l~~t~~eid~~l~~l~~~l 439 (443)
T PRK08297 401 -WEEGVLVLPC----------------------------------------GERSIRFRPALTVTTEEIDAAIDALRRAL 439 (443)
T ss_pred -HHCCEEEecC----------------------------------------CCCeEEEECCccCCHHHHHHHHHHHHHHH
Confidence 4678876311 11379999999999999999999999887
Q ss_pred hh
Q 007454 582 DA 583 (603)
Q Consensus 582 ~~ 583 (603)
+.
T Consensus 440 ~~ 441 (443)
T PRK08297 440 PE 441 (443)
T ss_pred Hh
Confidence 53
No 355
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=97.32 E-value=0.18 Score=53.94 Aligned_cols=104 Identities=21% Similarity=0.281 Sum_probs=69.0
Q ss_pred HHcCCEEEEEeccCCccc--cCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHH---H-HHHHhCCcEEEEecc
Q 007454 207 EKRGARVMSAEFSWPRLR--INSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLW---M-RIAQENDWHILIDAC 280 (603)
Q Consensus 207 ~~~Ga~V~~~~~~~~~g~--i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~---i-~~a~e~g~~vlvDAa 280 (603)
+..|-++...|+...+++ +|.++|++.+.+ .+++||.+..-.|.||.+..-+. | .+|++||+.|+.|=.
T Consensus 125 ~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~-----~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEI 199 (388)
T COG1168 125 KLNGRKVIENPLVEDDGRYEIDFDALEKAFVD-----ERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEI 199 (388)
T ss_pred hhcCcEEEeccccccCCcEEecHHHHHHHHhc-----CCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecc
Confidence 344556666666544555 599999999985 36799999999999999998763 3 368999999999963
Q ss_pred c----cCCCCCCCCC-CCCCCCc--EEEEcccccCCCCCCceEE
Q 007454 281 A----LGPKDMDSFG-LSLVRPD--FLICSFYQIFGENPSGFGC 317 (603)
Q Consensus 281 q----~~~~~m~~ld-ls~~~~D--flv~S~hK~fG~~P~G~G~ 317 (603)
. +.|+...++. |+....| +.+.|.-|-|. -.|+.|
T Consensus 200 HaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFN--laGL~~ 241 (388)
T COG1168 200 HADLVLGGHKHIPFASLSERFADNSITLTSASKTFN--LAGLKC 241 (388)
T ss_pred cccccccCCCccchhhcChhhhcceEEEeecccccc--chhhhh
Confidence 1 2232112322 3333223 55666689887 335544
No 356
>PRK09275 aspartate aminotransferase; Provisional
Probab=97.28 E-value=0.013 Score=66.34 Aligned_cols=104 Identities=16% Similarity=0.211 Sum_probs=67.3
Q ss_pred CCEEEEEeccC-CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHh--CCcEEEEecc--
Q 007454 210 GARVMSAEFSW-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQE--NDWHILIDAC-- 280 (603)
Q Consensus 210 Ga~V~~~~~~~-~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e--~g~~vlvDAa-- 280 (603)
|.+++.++.+. .+..++.++|++++. ++++++.+..-+|.||.+++-+.+ .+|++ ++++|+.|-+
T Consensus 213 ~~~~v~v~~~~~~~f~~d~~~l~~~~~------~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~ 286 (527)
T PRK09275 213 DLEVVHINADEENEWQYPDSELEKLRD------PSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG 286 (527)
T ss_pred CeEEEEeecCcccCCCCCHHHHHhhcC------CCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCCh
Confidence 44555554431 124678899988765 368888887889999999996633 35643 5999999975
Q ss_pred ccCCCCCCCCCCCCC-CCcEEEEcccccCCCCCCc--eEEEEEeCC
Q 007454 281 ALGPKDMDSFGLSLV-RPDFLICSFYQIFGENPSG--FGCLFVKKS 323 (603)
Q Consensus 281 q~~~~~m~~ldls~~-~~Dflv~S~hK~fG~~P~G--~G~L~vkk~ 323 (603)
-+.+.. .++ ++.. .--+++.||=|.|| -+| +|.++..++
T Consensus 287 ~f~~~~-~s~-~~~~~~~~I~v~SfSK~f~--mtG~RlG~i~~~~~ 328 (527)
T PRK09275 287 TFVDDF-RSL-FAVLPYNTILVYSFSKYFG--ATGWRLGVIALHED 328 (527)
T ss_pred hhcccc-cCH-HHhCCCCEEEEeehhhhcc--CcHhHHhhhhcCch
Confidence 222210 121 1111 12477789999999 447 698887765
No 357
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.26 E-value=0.036 Score=58.06 Aligned_cols=97 Identities=15% Similarity=0.206 Sum_probs=69.7
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HHH-HHHhCCcEEEEeccccC----CCCCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WMR-IAQENDWHILIDACALG----PKDMDSFGLSLVR 296 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i~-~a~e~g~~vlvDAaq~~----~~~m~~ldls~~~ 296 (603)
+.++|+..|.. ++..-|.+--..-+-|++.|=. .++ +|.++++++++|-.|.+ |+ |.-.|-+..+
T Consensus 195 d~eale~~l~~-----~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk-~la~d~env~ 268 (427)
T KOG1402|consen 195 DAEALEVALKS-----PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK-LLACDYENVR 268 (427)
T ss_pred CHHHHHHHhcC-----CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc-EEEeehhhcC
Confidence 57889988875 4677777767778999988843 343 78999999999998877 44 5677888899
Q ss_pred CcEEEEcccccCCCCCCceEEEEEeCCCCcCcCC
Q 007454 297 PDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 330 (603)
Q Consensus 297 ~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p 330 (603)
||.+++. |-+++.--=+-+.+..++++-.++|
T Consensus 269 PDivilg--KalSGG~~Pvsavl~~~~im~~~~p 300 (427)
T KOG1402|consen 269 PDIVILG--KALSGGVYPVSAVLADDDIMLNIKP 300 (427)
T ss_pred CCeEEEe--ccccCCeeeeEEEEecHHHHhccCC
Confidence 9999874 5443101125667777777755555
No 358
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=97.24 E-value=0.011 Score=66.77 Aligned_cols=104 Identities=17% Similarity=0.188 Sum_probs=69.4
Q ss_pred cCCEEEEEeccCCc------cccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhC--CcEEE
Q 007454 209 RGARVMSAEFSWPR------LRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQEN--DWHIL 276 (603)
Q Consensus 209 ~Ga~V~~~~~~~~~------g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~--g~~vl 276 (603)
.|++++.++.+..+ ..++.++|++++. ++++++.+.--+|.||.+++.+.+ .+|+++ +++|+
T Consensus 206 ~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~------~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II 279 (521)
T TIGR03801 206 YDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD------PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMIL 279 (521)
T ss_pred CCcEEEEeecccccccccccCCCCHHHHHHhcC------CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEE
Confidence 46777777664211 4678889988764 367888777778999999997633 357775 89999
Q ss_pred Eecc--ccCCCCCCCCCCCCCCCc--EEEEcccccCCCCCCc--eEEEEEeCC
Q 007454 277 IDAC--ALGPKDMDSFGLSLVRPD--FLICSFYQIFGENPSG--FGCLFVKKS 323 (603)
Q Consensus 277 vDAa--q~~~~~m~~ldls~~~~D--flv~S~hK~fG~~P~G--~G~L~vkk~ 323 (603)
.|=+ .+... ..++ ++. -+| +++.|+=|.||. +| +|.++..+.
T Consensus 280 ~DEvY~~f~~~-~~sl-~~~-~~~~vI~v~SfSK~fg~--~G~RlG~i~~~~~ 327 (521)
T TIGR03801 280 TDDVYGTFVDD-FRSL-FAE-LPYNTIGVYSFSKYFGA--TGWRLGTIALHKD 327 (521)
T ss_pred ECCCchhhccc-ccch-hhh-CCCCEEEEEcchhhccC--chhhhhhhhcCch
Confidence 9975 22321 1122 111 233 778899999994 46 888887654
No 359
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=97.23 E-value=0.025 Score=62.83 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=66.1
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceE-EEeCCCCCCCCCCEEEEEEc-cCCCCccCH---HHH
Q 007454 424 RGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVF-DWKREKIEP---VLV 498 (603)
Q Consensus 424 ~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv-~Iygp~~~~~rg~ivsFnv~-~~~g~~v~~---~~V 498 (603)
+.++.+.+ +.+.++++.+.++|.++|+++.. +.|.+ .+- .+|.++.+.+. +.+...-+. ..+
T Consensus 330 a~l~~i~~---~~~~~~~~~~g~~l~~~l~~l~~----~~~~~~~vr------g~G~~~~~~~~~~~~~~~~~~~~~~~l 396 (451)
T PRK06918 330 AVLDIIEK---ENLNDRAIELGKVVMNRFEEMKN----KYNCIGDVR------GLGAMCAFELVQDRKTKEPDKTLTANI 396 (451)
T ss_pred HHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHh----hCCCceeec------cceeEEEEEEccCCCcCCCcHHHHHHH
Confidence 35665543 34566788888888888887631 11211 121 24667766653 211000011 123
Q ss_pred HHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHH
Q 007454 499 QKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVA 578 (603)
Q Consensus 499 ~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~ 578 (603)
.+.+.++||.+..|. .. ..+||+++.+-.|.+||+.+++.|.
T Consensus 397 ~~~~~~~Gvlv~~~~-------------------------------------~~-~~~lrl~p~l~~t~~~id~~l~~l~ 438 (451)
T PRK06918 397 CKEANKRGLLLLSAG-------------------------------------TY-GNVIRVLMPLVITDEQLEEGLTIIE 438 (451)
T ss_pred HHHHHHCCeEEeecC-------------------------------------CC-CCEEEEECCCccCHHHHHHHHHHHH
Confidence 333356788875430 01 1589999999888999999999999
Q ss_pred HHHhhh
Q 007454 579 QFLDAD 584 (603)
Q Consensus 579 ~~l~~~ 584 (603)
+++..-
T Consensus 439 ~~l~~~ 444 (451)
T PRK06918 439 ESLQAC 444 (451)
T ss_pred HHHHHH
Confidence 999754
No 360
>PRK08637 hypothetical protein; Provisional
Probab=97.22 E-value=0.015 Score=63.15 Aligned_cols=112 Identities=13% Similarity=0.087 Sum_probs=68.8
Q ss_pred HcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHh-----CCcEEEEe
Q 007454 208 KRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQE-----NDWHILID 278 (603)
Q Consensus 208 ~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e-----~g~~vlvD 278 (603)
..|++++.++....+..++.++|++.+... ..+.+.++.++--+|.||..++.+.+ .+|++ ++++++.|
T Consensus 113 ~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~--~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~D 190 (388)
T PRK08637 113 RRGAEIVTYPIFDEDGGFDTDALKEALQAA--YNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVD 190 (388)
T ss_pred hcCCEEEEecccCCCCcCCHHHHHHHHHhh--ccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEec
Confidence 469999999873234568999999888610 01246778888889999999998633 23453 89999999
Q ss_pred ccc--c--CCCCCCCC--CCCCCCCcEE---EEcccccCCCCCCceEEEEEe
Q 007454 279 ACA--L--GPKDMDSF--GLSLVRPDFL---ICSFYQIFGENPSGFGCLFVK 321 (603)
Q Consensus 279 Aaq--~--~~~~m~~l--dls~~~~Dfl---v~S~hK~fG~~P~G~G~L~vk 321 (603)
-+= + .++.+.++ .+.......+ +.|+-|.|+.|---+|.+++.
T Consensus 191 e~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 191 DAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred ccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEc
Confidence 752 2 22211111 1111111222 239999887531127877764
No 361
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=97.20 E-value=0.013 Score=60.39 Aligned_cols=226 Identities=17% Similarity=0.164 Sum_probs=130.8
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccC---CCC----CCCCCCCCC
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALG---PKD----MDSFGLSLV 295 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~---~~~----m~~ldls~~ 295 (603)
-++.-+|+..+... .+-+.+||+--.+=.+-|-+-|++.| .+++++|+++++|-|..- |.. -..+++. -
T Consensus 176 h~dv~~l~~~l~~a--~k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm-~ 252 (417)
T KOG1359|consen 176 HVDVFDLEHCLISA--CKMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVM-G 252 (417)
T ss_pred cchhHHHHHHHHHh--hhheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCC-C
Confidence 35566777655431 12367899888888899999999966 589999999999965432 221 0123332 3
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccCCCC
Q 007454 296 RPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAATNT 375 (603)
Q Consensus 296 ~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~GT~n 375 (603)
++|.+.-..-|-.|+ -. -|..-..+.+.+.|+... +. +.-.+.=
T Consensus 253 ~vdiinsTLgKAlGg-a~-GGyttgp~~li~llrqr~-----------Rp-----------------------ylFSnsl 296 (417)
T KOG1359|consen 253 DVDIINSTLGKALGG-AS-GGYTTGPKPLISLLRQRS-----------RP-----------------------YLFSNSL 296 (417)
T ss_pred cceehhhhhhhhhcC-CC-CCCccCChhHHHHHHhcC-----------Cc-----------------------eeecCCC
Confidence 578888777786663 11 122222233222222100 00 0011111
Q ss_pred hhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC
Q 007454 376 FSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNALMKL 455 (603)
Q Consensus 376 ~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L 455 (603)
.+.+++++. +++|.+- .-.++-.+.+..++|+.+.+..-
T Consensus 297 ppavV~~a~---------------------------------------ka~dllm--~s~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 297 PPAVVGMAA---------------------------------------KAYDLLM--VSSKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred ChhhhhhhH---------------------------------------HHHHHHH--hhHHHHHHHHHHHHHHHHHHHhc
Confidence 223444442 5666543 33566667788889998888642
Q ss_pred CCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCccCHHHHHHHHh---cCCcEEeeCcccCccCCchhhhhhHHHHH
Q 007454 456 QHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKIEPVLVQKLAD---RENISLSYGSLHHIWFSDKYQKEKDNVLE 532 (603)
Q Consensus 456 ~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v~~~~V~~Lad---~~gI~lr~G~~C~~~~~~~~~~~~~~~l~ 532 (603)
| +.|-|.. -||...-+-|.. +-.+++| +.||.|= ++.-+-
T Consensus 336 ------G---ftIsg~~-----hPI~pv~lGda~-------lA~~~ad~lLk~Gi~Vi-------gfs~Pv--------- 378 (417)
T KOG1359|consen 336 ------G---FTISGAS-----HPICPVMLGDAR-------LASKMADELLKRGIYVI-------GFSYPV--------- 378 (417)
T ss_pred ------C---ceecCCC-----CCccceecccHH-------HHHHHHHHHHhcCceEE-------eecCCc---------
Confidence 2 6777642 467776665531 2223322 4677763 111110
Q ss_pred hhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 007454 533 KTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDA 583 (603)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~ 583 (603)
. ..+.--+|+-++...|+||||++++++.+..+-
T Consensus 379 ----------V-------P~gkariRVqiSAaHt~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 379 ----------V-------PKGKARIRVQISAAHTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred ----------C-------CCCceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence 0 112236999999999999999999999887654
No 362
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=97.15 E-value=0.023 Score=62.73 Aligned_cols=96 Identities=17% Similarity=0.099 Sum_probs=62.4
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHHH-HHHhCCcEEEEeccccCCCCCCCC---CCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWMR-IAQENDWHILIDACALGPKDMDSF---GLSLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i~-~a~e~g~~vlvDAaq~~~~~m~~l---dls~~~~ 297 (603)
+.+.|++.|... ..++..|.+--+....|.+.| ++.+. +|+++|+.+++|=+|.+-.. ... ..-...|
T Consensus 186 d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt-~~~~a~~~~gv~P 261 (428)
T PRK12389 186 DIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRF-MYGGAQDLLGVEP 261 (428)
T ss_pred CHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccccc-CcchhhHHhCCCC
Confidence 577888888632 124555555545556799888 66564 79999999999988775321 111 1112469
Q ss_pred cEEEEcccccCCC-CCCceEEEEEeCCCCcCcC
Q 007454 298 DFLICSFYQIFGE-NPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 298 Dflv~S~hK~fG~-~P~G~G~L~vkk~~~~~L~ 329 (603)
|++++ =|.+|+ .| +|++..++++++.+.
T Consensus 262 Divt~--gK~lggG~P--i~av~~~~~i~~~~~ 290 (428)
T PRK12389 262 DLTAL--GKIIGGGLP--IGAYGGRKDIMEQVA 290 (428)
T ss_pred Ceeee--chhhcCCCc--eeEEeEHHHHHhhhc
Confidence 98755 476542 12 799999988876554
No 363
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.15 E-value=0.06 Score=60.08 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=65.7
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceE-EEeCCCCCCCCCCEEEEEEccCCCC-------ccCH
Q 007454 424 RGLDQVDSLGLTMISRRGRCLINWLVNALMKLQHPNTEGNALV-KIYGPKIRFDRGPALAFNVFDWKRE-------KIEP 495 (603)
Q Consensus 424 ~ald~~~~iGl~~i~~r~~~L~~~L~~~L~~L~h~~~~g~plv-~Iygp~~~~~rg~ivsFnv~~~~g~-------~v~~ 495 (603)
+.|+.+++- .+.++++.+.++|.++|.++.. ..|.| .+- -+|.++.+.+.+.... ..+.
T Consensus 335 a~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~----~~~~i~~vr------G~Glm~giel~~~~~~~~~~~~~~~~~ 401 (459)
T PRK06931 335 TTLKILKEE---NLAQNAAERGEWLKAQLAELQK----RYPCIGNVR------GRGLMIGIEIVDERQPADAMGSYPADG 401 (459)
T ss_pred HHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHH----hCCCeEeEe------cCceEEEEEEccCcccccccccCCccH
Confidence 466665543 4567788888888888887731 01222 222 3567777777432110 0011
Q ss_pred ---HHHHHHHhcCCcEEeeCcccCccCCchhhhhhHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHH
Q 007454 496 ---VLVQKLADRENISLSYGSLHHIWFSDKYQKEKDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYR 572 (603)
Q Consensus 496 ---~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~ 572 (603)
..+.+.+-++||.++.+ .....++|+.+.+-.|.+||+.
T Consensus 402 ~~~~~~~~~~~~~Gvl~~~~--------------------------------------~~~~~~l~~~Ppl~it~~eid~ 443 (459)
T PRK06931 402 ELAAAIQKACFENGLLLERG--------------------------------------GRNGNVVRLLPPLLITQAECEE 443 (459)
T ss_pred HHHHHHHHHHHHCCcEEeec--------------------------------------CCCCCEEEEECCCCcCHHHHHH
Confidence 12223333566665421 0112489999999999999999
Q ss_pred HHHHHHHHHhh
Q 007454 573 LWAFVAQFLDA 583 (603)
Q Consensus 573 l~~~l~~~l~~ 583 (603)
+++.+.+.|.+
T Consensus 444 ~~~~l~~~l~~ 454 (459)
T PRK06931 444 FIDRFEQALLA 454 (459)
T ss_pred HHHHHHHHHHH
Confidence 99999998865
No 364
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.13 E-value=0.048 Score=64.81 Aligned_cols=83 Identities=11% Similarity=0.170 Sum_probs=51.5
Q ss_pred eEEEEeCccccccccccH-H---HH-HHHHhCCcEEEEeccccC-CCC--CCCCCCCCCCCcEEEEcccccCCCCCCceE
Q 007454 245 GLFVFPLHSRMTGARYPY-L---WM-RIAQENDWHILIDACALG-PKD--MDSFGLSLVRPDFLICSFYQIFGENPSGFG 316 (603)
Q Consensus 245 ~Lv~~~~~Sn~TG~~~pl-~---~i-~~a~e~g~~vlvDAaq~~-~~~--m~~ldls~~~~Dflv~S~hK~fG~~P~G~G 316 (603)
.+++=|.+...-|.+.|= . .+ ++|+++|+++++|=++.+ |.. |-..+.-...||+++++ |.+++.-.=+|
T Consensus 587 AvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~g--KgLtgG~~Pla 664 (817)
T PLN02974 587 ALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYA--KLLTGGLVPLA 664 (817)
T ss_pred EEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeec--ccccCCCCccE
Confidence 455556555667887652 2 33 368999999999977654 220 11222223469999986 75542001179
Q ss_pred EEEEeCCCCcCcC
Q 007454 317 CLFVKKSTVPILV 329 (603)
Q Consensus 317 ~L~vkk~~~~~L~ 329 (603)
++++++++++.+.
T Consensus 665 a~l~~~~I~~~f~ 677 (817)
T PLN02974 665 ATLATEEVFEAFR 677 (817)
T ss_pred EEEEcHHHHHhhc
Confidence 9999988876553
No 365
>PRK07046 aminotransferase; Validated
Probab=97.01 E-value=0.03 Score=62.34 Aligned_cols=91 Identities=12% Similarity=0.095 Sum_probs=58.0
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc----HHHH-HHHHhCCcEEEEecccc-----CCCCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP----YLWM-RIAQENDWHILIDACAL-----GPKDMDSFGLSLV 295 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p----l~~i-~~a~e~g~~vlvDAaq~-----~~~~m~~ldls~~ 295 (603)
+.+.|++.+.. .+...|.+--.....|.+.| ++.+ ++|+++|+.+++|=++. ++. ..-. ..
T Consensus 206 d~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~-~~~~---gv 276 (453)
T PRK07046 206 DLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGY-TRAH---GL 276 (453)
T ss_pred CHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcch-hHHh---CC
Confidence 56778877742 24554444444444687777 3444 37899999999998774 222 0112 34
Q ss_pred CCcEEEEcccccCC-CCCCceEEEEEeCCCCcCcC
Q 007454 296 RPDFLICSFYQIFG-ENPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 296 ~~Dflv~S~hK~fG-~~P~G~G~L~vkk~~~~~L~ 329 (603)
.||++++ =|.+| +.| +|++..|+++++.+.
T Consensus 277 ~PDi~t~--gK~lggG~P--i~av~g~~~i~~~~~ 307 (453)
T PRK07046 277 EPDFLVV--GKPIAGGVP--CAVYGFSAELAERAQ 307 (453)
T ss_pred Cccceee--hhhhcCCCc--ceeeeehHHHHHHHh
Confidence 6999875 57544 224 789999998876554
No 366
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=97.01 E-value=0.14 Score=55.19 Aligned_cols=144 Identities=15% Similarity=0.274 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHcCCCCCcEEEeccCchH--------------------HH-----------------HHHHHHHcCCEEE
Q 007454 172 ESAMKKRIMDFLNISENDYVYDYESEAV--------------------EA-----------------MIRTSEKRGARVM 214 (603)
Q Consensus 172 ~~~aR~~Ia~~lna~~~e~vf~~es~sV--------------------~~-----------------~~~~a~~~Ga~V~ 214 (603)
+-++|+-.+++||+++++++-.-+| |+ +| =...++..|++..
T Consensus 71 ipe~r~l~a~llgv~~~~viv~gNS-SL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Giemi 149 (425)
T PF12897_consen 71 IPEARELFAELLGVPPENVIVGGNS-SLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIEMI 149 (425)
T ss_dssp -HHHHHHHHHHHTS-GGGEEE-SS--HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-EEE
T ss_pred hHHHHHHHHHHhCCCHHHEEEeccc-hHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcEEE
Confidence 5689999999999999998532111 11 11 1234577899999
Q ss_pred EEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHH-HH----HhCCcEEEEeccccCCCCCC-
Q 007454 215 SAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMR-IA----QENDWHILIDACALGPKDMD- 288 (603)
Q Consensus 215 ~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~-~a----~e~g~~vlvDAaq~~~~~m~- 288 (603)
.+|.. ++| .|.+.+++++..+. .-.++.++|--||.||+.|+=+.++ +| ...+-.++.|-+-.+-| +.
T Consensus 150 ~VpM~-~dG-PDmD~Ve~LV~~D~---svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHh-L~~ 223 (425)
T PF12897_consen 150 PVPMT-EDG-PDMDMVEELVAEDP---SVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHH-LYD 223 (425)
T ss_dssp EEEEE-TTE-E-HHHHHHHTHTST---TEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-B-SSS
T ss_pred ecCCC-CCC-CCHHHHHHHHhcCC---ccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEee-ccc
Confidence 99887 344 58999999986431 2368999999999999999988775 44 34678888997644433 10
Q ss_pred --C----CCC-----CCCCCc--EEEEccccc-CCCCCCceEEEEEeCCC
Q 007454 289 --S----FGL-----SLVRPD--FLICSFYQI-FGENPSGFGCLFVKKST 324 (603)
Q Consensus 289 --~----ldl-----s~~~~D--flv~S~hK~-fG~~P~G~G~L~vkk~~ 324 (603)
+ +|+ +.-.|| |+.+|.-|+ |- -.|++++-..+.-
T Consensus 224 ~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~--GaGva~~aaS~~N 271 (425)
T PF12897_consen 224 EEPRDALLNILDACAKAGNPDRVYVFASTSKITFP--GAGVAFFAASEAN 271 (425)
T ss_dssp SSS------HHHHHHHTT-TTSEEEEEESTTTS-T--TSS-EEEEE-HHH
T ss_pred cccchhhhHHHHHHHHcCCCCeEEEEecccccccC--CcceeeeecCHHH
Confidence 0 111 012344 677888886 44 2367766655443
No 367
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=96.96 E-value=0.036 Score=62.06 Aligned_cols=96 Identities=17% Similarity=0.209 Sum_probs=61.1
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH----HH-HHHHhCCcEEEEeccccCCCCCCCCCC---CCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL----WM-RIAQENDWHILIDACALGPKDMDSFGL---SLVRP 297 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~----~i-~~a~e~g~~vlvDAaq~~~~~m~~ldl---s~~~~ 297 (603)
+.+.|++.|... ......|.+-.+....|.+.|.. .+ ++|+++|+.+++|=++.+-.. ..... -...|
T Consensus 232 d~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~-g~~ga~~~~gv~P 307 (474)
T PLN02482 232 DLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRI-AYGGAQEYFGITP 307 (474)
T ss_pred ChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeec-CcchHhHHhCCCC
Confidence 567888888632 13455555555555679888853 23 478999999999988753210 11111 12369
Q ss_pred cEEEEcccccCCC-CCCceEEEEEeCCCCcCcC
Q 007454 298 DFLICSFYQIFGE-NPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 298 Dflv~S~hK~fG~-~P~G~G~L~vkk~~~~~L~ 329 (603)
|.+++ =|.+|+ .| +|++..++++++.+.
T Consensus 308 Di~t~--gK~lggG~P--igav~g~~ei~~~~~ 336 (474)
T PLN02482 308 DLTTL--GKVIGGGLP--VGAYGGRREIMEMVA 336 (474)
T ss_pred CEEEe--cchhhCCCc--eEEEEEcHHHHHhhc
Confidence 98765 586652 13 799999988876554
No 368
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=96.94 E-value=0.15 Score=55.04 Aligned_cols=117 Identities=16% Similarity=0.188 Sum_probs=77.2
Q ss_pred HHcCCEEEEEeccCC-ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-H---HHHhCCcEEEEecc-
Q 007454 207 EKRGARVMSAEFSWP-RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-R---IAQENDWHILIDAC- 280 (603)
Q Consensus 207 ~~~Ga~V~~~~~~~~-~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~---~a~e~g~~vlvDAa- 280 (603)
.+.|++++.+..... +.+|+.+.|+.++...++...+++=+.++--||..|+.++=+.+ . -|+++++||++|=.
T Consensus 189 ~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIy 268 (471)
T KOG0256|consen 189 WRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIY 268 (471)
T ss_pred eccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhh
Confidence 467888888887543 34889999999887544445567777788889999999998743 3 37899999999953
Q ss_pred --ccCCCC-CCC---C-CCCCCCCc--EEEEcccccCCCCCCceEEEEEeCC
Q 007454 281 --ALGPKD-MDS---F-GLSLVRPD--FLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 281 --q~~~~~-m~~---l-dls~~~~D--flv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
....+. -.+ + ..-.+.+| -++.|--|=||-|---+|++|-.++
T Consensus 269 a~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne 320 (471)
T KOG0256|consen 269 AGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE 320 (471)
T ss_pred cccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh
Confidence 222220 000 0 00011333 4678888988863222788887654
No 369
>PLN02368 alanine transaminase
Probab=96.87 E-value=0.0075 Score=66.16 Aligned_cols=145 Identities=13% Similarity=0.091 Sum_probs=90.0
Q ss_pred HHHHHHHHHc----C--CCCCcEEEeccCc-hHHHH----------------------HHHHHHcCCEEEEEeccCC-cc
Q 007454 174 AMKKRIMDFL----N--ISENDYVYDYESE-AVEAM----------------------IRTSEKRGARVMSAEFSWP-RL 223 (603)
Q Consensus 174 ~aR~~Ia~~l----n--a~~~e~vf~~es~-sV~~~----------------------~~~a~~~Ga~V~~~~~~~~-~g 223 (603)
+.|+.|++++ | +++++++.+..+. ++..+ ...++..|++++.++++.. +.
T Consensus 111 ~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~ 190 (407)
T PLN02368 111 GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENW 190 (407)
T ss_pred HHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCC
Confidence 6777888777 5 5778887765432 22221 2234456777877777522 24
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEecc--ccC--CC-CCCCC----
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDAC--ALG--PK-DMDSF---- 290 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAa--q~~--~~-~m~~l---- 290 (603)
.++.++|++.+...+.+..+++++.+..-+|.||.+++.+.+ ..|++++++|+.|-+ .+. +. ...++
T Consensus 191 ~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~ 270 (407)
T PLN02368 191 GLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVL 270 (407)
T ss_pred CCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHH
Confidence 688999999986321112257877787779999999999744 357899999999975 222 21 00111
Q ss_pred -CCC----CCCCcEEEEcccccC-CCCCCc--eEEEEE
Q 007454 291 -GLS----LVRPDFLICSFYQIF-GENPSG--FGCLFV 320 (603)
Q Consensus 291 -dls----~~~~Dflv~S~hK~f-G~~P~G--~G~L~v 320 (603)
++. ...-=+++.||-|.| |. .| +|.+++
T Consensus 271 ~~~~~~~~~~~~vI~~~SfSK~~~~~--~GlRiGy~i~ 306 (407)
T PLN02368 271 MDMGPPISKEVQLVSFHTVSKGYWGE--CGQRGGYFEM 306 (407)
T ss_pred hhhcccccccceEEEEecCCcccccC--CccceEEEEE
Confidence 110 011226678999987 64 35 787774
No 370
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=96.56 E-value=0.084 Score=58.36 Aligned_cols=93 Identities=13% Similarity=0.104 Sum_probs=52.2
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCC---CCCCcEEE
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLS---LVRPDFLI 301 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls---~~~~Dflv 301 (603)
+.++|++.|... ..++..|++-.+..+.+..-+++.+ ++|+++|+.+++|-++.+-. +...... ...||+++
T Consensus 173 d~~~l~~~l~~~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~-~~~~g~~~~~gv~PDi~t 248 (431)
T PRK06209 173 DIASLEALFEDH---PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFR-WHMRGAQKLYGIVPDLSC 248 (431)
T ss_pred CHHHHHHHHHhC---CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCC-cCcchhhHHhCCCcceee
Confidence 578888888631 1234444443322122222225544 47899999999999874421 1111122 23689866
Q ss_pred EcccccCCC-CCCceEEEEEeCCCCc
Q 007454 302 CSFYQIFGE-NPSGFGCLFVKKSTVP 326 (603)
Q Consensus 302 ~S~hK~fG~-~P~G~G~L~vkk~~~~ 326 (603)
+ =|-+|+ .| +|++..++++++
T Consensus 249 ~--gK~lggG~p--~~av~~~~~i~~ 270 (431)
T PRK06209 249 F--GKALGNGFA--VSALAGKREYME 270 (431)
T ss_pred e--hhhhcCCcc--cEEEEEHHHHHh
Confidence 5 586652 12 788888877654
No 371
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=96.55 E-value=0.029 Score=61.73 Aligned_cols=111 Identities=16% Similarity=0.203 Sum_probs=69.5
Q ss_pred HHcCCEEEEEecc--------C-CccccCHHHHHHHHhhcCCCCCCeeEEEEeCcccc-ccccccHHHHH----HHHhCC
Q 007454 207 EKRGARVMSAEFS--------W-PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRM-TGARYPYLWMR----IAQEND 272 (603)
Q Consensus 207 ~~~Ga~V~~~~~~--------~-~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~-TG~~~pl~~i~----~a~e~g 272 (603)
.-.|+.+..+..+ - ..|.+++++|++.|..... .+...+.....+|. -|...|++.|+ +|+++|
T Consensus 140 ~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~--~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~G 217 (467)
T TIGR02617 140 QINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP--NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYD 217 (467)
T ss_pred HHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC--CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcC
Confidence 3457776654321 1 2588999999999974211 12333333334454 46789998664 579999
Q ss_pred cEEEEeccccC-----------CCCCCCCCCCC------CCCcEEEEcccccCCCCCCceEEEEEeCC
Q 007454 273 WHILIDACALG-----------PKDMDSFGLSL------VRPDFLICSFYQIFGENPSGFGCLFVKKS 323 (603)
Q Consensus 273 ~~vlvDAaq~~-----------~~~m~~ldls~------~~~Dflv~S~hK~fG~~P~G~G~L~vkk~ 323 (603)
+.+|+|+|=++ +. ...++++ -.+|.+++|+=|-+|. |-| |+|..+++
T Consensus 218 IplhLDgARl~nNA~fIk~rE~~a--~~~si~eI~rE~~~~aDsvt~slsKglgA-pvG-g~Lag~d~ 281 (467)
T TIGR02617 218 IPVVMDSARFAENAYFIKQREAEY--KNWSIEQITRETYKYADMLAMSAKKDAMV-PMG-GLLCFKDD 281 (467)
T ss_pred CcEEEEhHHHHHHhhhhhhcchhh--cCCCHHHHHHHhhccCCEEEEEcCCCCCC-ccc-ceEEecch
Confidence 99999995322 11 1222221 3699999999999997 543 34555555
No 372
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.33 E-value=0.62 Score=52.92 Aligned_cols=110 Identities=19% Similarity=0.237 Sum_probs=75.2
Q ss_pred HcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCcccccccc-ccHH-HHHHHHhCCcEEEEecccc---
Q 007454 208 KRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGAR-YPYL-WMRIAQENDWHILIDACAL--- 282 (603)
Q Consensus 208 ~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~-~pl~-~i~~a~e~g~~vlvDAaq~--- 282 (603)
-.|.+|+.+..+ .+|.|+..+|+.+....+. .=..-+|.+|.- .|+- -.++ .+.+.|++|-.|.+|++-.
T Consensus 649 MagmkvvpV~~~-~~G~id~~dLk~kaekh~~-~Laa~MvTYPST---~GvfE~~i~d~cd~iHehGGQVYlDGANMNAq 723 (1001)
T KOG2040|consen 649 MAGMKVVPVGCD-ANGNIDMVDLKAKAEKHKD-NLAALMVTYPST---HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQ 723 (1001)
T ss_pred hcCCEEEEeecc-CCCCccHHHHHHHHHHhhh-hhheeEEecccc---cccccccHHHHHHHHHhcCCEEEecCCCccce
Confidence 358889888888 5899999999988764211 112334444432 4543 3465 6678999999999998633
Q ss_pred -CCCCCCCCCCCCCCCcEEEEcccccC------CCCCCceEEEEEeCCCCcCcC
Q 007454 283 -GPKDMDSFGLSLVRPDFLICSFYQIF------GENPSGFGCLFVKKSTVPILV 329 (603)
Q Consensus 283 -~~~~m~~ldls~~~~Dflv~S~hK~f------G~~P~G~G~L~vkk~~~~~L~ 329 (603)
+-. .|= +++.|.--...||.| |+ | |+|=+-||+.+..-|.
T Consensus 724 VGlc--~pG---d~GaDV~HLNLHKTFcIPHGGGG-P-g~gPIgVK~HLapfLP 770 (1001)
T KOG2040|consen 724 VGLC--RPG---DIGADVCHLNLHKTFCIPHGGGG-P-GMGPIGVKKHLAPFLP 770 (1001)
T ss_pred eccc--CCc---cccccceeecccceeeecCCCCC-C-CCCccchhhhccccCC
Confidence 322 222 467899999999976 33 3 7888889988765443
No 373
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.20 E-value=0.53 Score=50.65 Aligned_cols=147 Identities=22% Similarity=0.334 Sum_probs=85.4
Q ss_pred HHHHHHHHHcCCCCCcEEEeccCchHHHHHHHHHHcCCEEEEEec-cCC----------c----cccCHHHHHHHHhhcC
Q 007454 174 AMKKRIMDFLNISENDYVYDYESEAVEAMIRTSEKRGARVMSAEF-SWP----------R----LRINSEKLRKMVVSKG 238 (603)
Q Consensus 174 ~aR~~Ia~~lna~~~e~vf~~es~sV~~~~~~a~~~Ga~V~~~~~-~~~----------~----g~i~~~~L~~~l~~~~ 238 (603)
+.-++||+|||+ ++-++|.+.-..+...+.+..++|.-+...+- +|. + .-.+.++|+..+....
T Consensus 143 dlE~~iakF~G~-E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhndm~~lerll~E~~ 221 (467)
T KOG1358|consen 143 DLEKRIAKFMGT-EDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHNDMEDLERLLPEQE 221 (467)
T ss_pred ccHHHHHHhhCC-cceeeeccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCCCHHHHHHhccCcc
Confidence 445689999998 45566665433344333344445544333221 110 0 1136778877664311
Q ss_pred ----C--CCCC-eeEEEEeCccccccccccHH-HHHHHHhCCcEEEEeccccCCCC-------CCCCCCCCCCCcEEEEc
Q 007454 239 ----K--KKKQ-RGLFVFPLHSRMTGARYPYL-WMRIAQENDWHILIDACALGPKD-------MDSFGLSLVRPDFLICS 303 (603)
Q Consensus 239 ----~--~~~~-t~Lv~~~~~Sn~TG~~~pl~-~i~~a~e~g~~vlvDAaq~~~~~-------m~~ldls~~~~Dflv~S 303 (603)
| ++.. .+.+++-.....||.+.|+. ++++..++...|++|=+-..|.- -.-+++..-.+|.+++|
T Consensus 222 ~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~s 301 (467)
T KOG1358|consen 222 DEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTAS 301 (467)
T ss_pred hhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeec
Confidence 1 1122 45667778888899999998 55788899999999965333210 01133444468999998
Q ss_pred ccccCCCCCCceEEEEEeCCCC
Q 007454 304 FYQIFGENPSGFGCLFVKKSTV 325 (603)
Q Consensus 304 ~hK~fG~~P~G~G~L~vkk~~~ 325 (603)
.---++ +.|+..+-++.+
T Consensus 302 m~~ala----s~GgFc~G~~~i 319 (467)
T KOG1358|consen 302 METALA----SGGGFCAGKSFI 319 (467)
T ss_pred cccccc----ccCceeecceee
Confidence 877655 344444445555
No 374
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=96.12 E-value=0.03 Score=60.32 Aligned_cols=112 Identities=13% Similarity=0.189 Sum_probs=78.5
Q ss_pred cCCEEEEEecc-------CCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH---HHH-HHHhCCcEEEE
Q 007454 209 RGARVMSAEFS-------WPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL---WMR-IAQENDWHILI 277 (603)
Q Consensus 209 ~Ga~V~~~~~~-------~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~---~i~-~a~e~g~~vlv 277 (603)
.|.+.+.++.. .++..+|.++|++++.. +|+++++.--+|.||.+++=+ .|+ +|++||.+|+.
T Consensus 137 aG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~------kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvis 210 (420)
T KOG0257|consen 137 AGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE------KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVIS 210 (420)
T ss_pred cCCcceeeccccccccccCccccCChHHHHhhccC------CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEE
Confidence 37777777665 34567899999999985 699999999999999999965 343 78999999999
Q ss_pred ecc-ccC---CCCCCCC-C-CCCCCCcEEEEcccccCCCCCCc--eEEEEEeCCCCcCc
Q 007454 278 DAC-ALG---PKDMDSF-G-LSLVRPDFLICSFYQIFGENPSG--FGCLFVKKSTVPIL 328 (603)
Q Consensus 278 DAa-q~~---~~~m~~l-d-ls~~~~Dflv~S~hK~fG~~P~G--~G~L~vkk~~~~~L 328 (603)
|-+ +.. |..|..+ . -..+..-.-+.||=|.|| -|| +|-++..+.++..+
T Consensus 211 DevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~--~TGWrlGW~igp~~L~~~~ 267 (420)
T KOG0257|consen 211 DEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFG--VTGWRLGWAIGPKHLYSAL 267 (420)
T ss_pred hhHhHHHhhCCCcceeeecCCchhheEEEeccccceee--eeeeeeeeeechHHhhhhH
Confidence 975 222 2211111 0 111234456899999999 678 78787765554333
No 375
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=96.00 E-value=0.86 Score=51.60 Aligned_cols=135 Identities=16% Similarity=0.105 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEeccCchHHHHHHHH---------------------HHcCCEEEEEeccC-C----ccc
Q 007454 171 LESAMKKRIMDFLNISENDYVYDYESEAVEAMIRTS---------------------EKRGARVMSAEFSW-P----RLR 224 (603)
Q Consensus 171 ~~~~aR~~Ia~~lna~~~e~vf~~es~sV~~~~~~a---------------------~~~Ga~V~~~~~~~-~----~g~ 224 (603)
.+.+|-+.+|+.+|++..=++-.=.|.+...|+.+. --.|+.-+++.... | -+.
T Consensus 71 ~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~gg 150 (557)
T COG1982 71 PIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGG 150 (557)
T ss_pred cHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccccCC
Confidence 456788889999998755443222222323333222 23466666654331 1 246
Q ss_pred cCHHHHHHHHhhcCCCCCCe-eEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccc---cCCCCCCCCCCCCCCCcE
Q 007454 225 INSEKLRKMVVSKGKKKKQR-GLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACA---LGPKDMDSFGLSLVRPDF 299 (603)
Q Consensus 225 i~~~~L~~~l~~~~~~~~~t-~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq---~~~~~m~~ldls~~~~Df 299 (603)
|+.+.+++.+..++ .. ++.+++.- .--|+.+++++| ..++..+|+|++|-+. ...++|.+..-.+.+.||
T Consensus 151 I~~~~~~~~l~~~~----~~~k~~vitnp-TYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~ 225 (557)
T COG1982 151 IPLETFKEALLAHP----DAEKLAVITNP-TYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADF 225 (557)
T ss_pred CCHHHHHHHHHhCh----hhheeEEEecC-ccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceE
Confidence 89999999877532 23 66666544 357999999965 5899999999999753 333433333112368999
Q ss_pred EEEcccccCCC
Q 007454 300 LICSFYQIFGE 310 (603)
Q Consensus 300 lv~S~hK~fG~ 310 (603)
++-|.||..|+
T Consensus 226 ~tqS~HK~l~a 236 (557)
T COG1982 226 VTQSTHKLLAA 236 (557)
T ss_pred EEechhhhhhh
Confidence 99999999884
No 376
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=95.97 E-value=0.28 Score=54.21 Aligned_cols=225 Identities=18% Similarity=0.224 Sum_probs=128.2
Q ss_pred HHHHHHHHhhcCCCCCC-eeEEEEeCccccccccccHH-H---HH-HHHhCCcEEEEecc--ccC--CCCCCCCCCC--C
Q 007454 227 SEKLRKMVVSKGKKKKQ-RGLFVFPLHSRMTGARYPYL-W---MR-IAQENDWHILIDAC--ALG--PKDMDSFGLS--L 294 (603)
Q Consensus 227 ~~~L~~~l~~~~~~~~~-t~Lv~~~~~Sn~TG~~~pl~-~---i~-~a~e~g~~vlvDAa--q~~--~~~m~~ldls--~ 294 (603)
.++|+++|.... ..+ ..+++=|.+.-..|.+.|-. + ++ +|+++|++++.|=+ .++ |+ .+-.+ .
T Consensus 200 a~~le~~i~~~g--~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~---~FA~e~~g 274 (449)
T COG0161 200 ADELEALILEHG--PETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGK---MFACEHAG 274 (449)
T ss_pred HHHHHHHHHhcC--cccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCch---hhhhhhcC
Confidence 566777776421 012 25666677777788877754 3 33 68999999999953 333 22 12222 2
Q ss_pred CCCcEEEEccccc--CCCCCCceEEEEEeCCCCcCcCCCCCCCceeccccccccccccccCCCCCCcccCcccccccccC
Q 007454 295 VRPDFLICSFYQI--FGENPSGFGCLFVKKSTVPILVDNTSSGMVSLLPAKKQLWLTDEFSSCETEPEQTSKSKQEKVAA 372 (603)
Q Consensus 295 ~~~Dflv~S~hK~--fG~~P~G~G~L~vkk~~~~~L~p~~~gG~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~G 372 (603)
..||+++++ |- -|+ .=+|+.++++.+.+.+.... +|.. -.|
T Consensus 275 i~PDi~~~a--KGLT~GY--~Pl~a~l~~~~I~~~~~~~~-~~~f--------------------------------~HG 317 (449)
T COG0161 275 IVPDILCLA--KGLTGGY--LPLSAVLTSDRIYEAFSDGD-AGAF--------------------------------MHG 317 (449)
T ss_pred CCCCeeeec--ccccccc--hhhHhHhhhHHHHHHHhccc-CCee--------------------------------ccC
Confidence 469999886 53 232 12677777777765443221 1110 011
Q ss_pred CCChhhhhhhhhhhcCccccchhHHHhhhhhhhhhhhccCCCCCCCchhHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 007454 373 TNTFSGPMSIEMRQSGKLEQGEISEVRRAEADSIQQKNANTNGGGGSEIECRGLDQVDSLGLTMISRRGRCLINWLVNAL 452 (603)
Q Consensus 373 T~n~~gi~gl~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ald~~~~iGl~~i~~r~~~L~~~L~~~L 452 (603)
-.-...+++-+ .++ +-|+.+++ +.+.+|++.+..+|.++|
T Consensus 318 ~TYsghPlacA------------aAl-------------------------a~L~i~e~---e~l~~~~~~~~~~l~~~L 357 (449)
T COG0161 318 HTYSGNPLACA------------AAL-------------------------ANLDILEE---EDLLERVAEIGAYLQAGL 357 (449)
T ss_pred CccccCHHHHH------------HHH-------------------------HHHHHHHh---cCHHHHHHHHHHHHHHHH
Confidence 10011122211 011 35666654 455667788888888888
Q ss_pred hc-CCCCCCCCCceEEEeCCCCCCCCCCEEEEEEccCCCCcc-----CHHHHHHHHhcCCcEEeeCcccCccCCchhhhh
Q 007454 453 MK-LQHPNTEGNALVKIYGPKIRFDRGPALAFNVFDWKREKI-----EPVLVQKLADRENISLSYGSLHHIWFSDKYQKE 526 (603)
Q Consensus 453 ~~-L~h~~~~g~plv~Iygp~~~~~rg~ivsFnv~~~~g~~v-----~~~~V~~Lad~~gI~lr~G~~C~~~~~~~~~~~ 526 (603)
.+ +. +.|.| |.- ..+|-+.++-+...++... -...+.+.+-++|+.+|..
T Consensus 358 ~~~l~-----~~p~V---gdV--R~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~-------------- 413 (449)
T COG0161 358 QAALA-----DHPLV---GDV--RGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL-------------- 413 (449)
T ss_pred HHhcc-----cCCcE---EEe--eccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec--------------
Confidence 87 43 12333 211 1345666666655443221 0123455555677777632
Q ss_pred hHHHHHhhhcccccccccccccCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHhhh
Q 007454 527 KDNVLEKTDREAKSKSDNNRKDKANLGITVVTASLGYLANFEDVYRLWAFVAQFLDAD 584 (603)
Q Consensus 527 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~VR~Slg~~tt~eDVd~l~~~l~~~l~~~ 584 (603)
+ .+|=+++-+--|.|||+++++.+++-|+..
T Consensus 414 --------------------------g-~~i~~~PPliit~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 414 --------------------------G-DVIYLMPPLIITREEIDELVDALREALDET 444 (449)
T ss_pred --------------------------C-CEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 0 267788889999999999999999988763
No 377
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=95.77 E-value=0.0041 Score=66.90 Aligned_cols=100 Identities=14% Similarity=0.023 Sum_probs=73.8
Q ss_pred HHHHcCCEEEEEec--cCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCcccccccccc-HHHHH-HHHhCCcEEEEecc
Q 007454 205 TSEKRGARVMSAEF--SWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYP-YLWMR-IAQENDWHILIDAC 280 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~--~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~p-l~~i~-~a~e~g~~vlvDAa 280 (603)
+....|.++..++. .......+.+.+++.|... .+...|.++++.|-+-|...| +..|+ +|+++|+..+|-.|
T Consensus 117 ai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnA 193 (389)
T PF05889_consen 117 AIERAGLEPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNA 193 (389)
T ss_dssp HHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGT
T ss_pred HHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccc
Confidence 34556888888874 2234556788888888642 235799999999999999999 88775 89999999999998
Q ss_pred ccC---------------CCCCCCCCCCCCCCcEEEEcccccCC
Q 007454 281 ALG---------------PKDMDSFGLSLVRPDFLICSFYQIFG 309 (603)
Q Consensus 281 q~~---------------~~~m~~ldls~~~~Dflv~S~hK~fG 309 (603)
=.+ |. .+++++..+.||++-++||+..
T Consensus 194 YgvQ~~~~~~~i~~a~~~GR--vda~vqS~dkNF~VPvGgai~A 235 (389)
T PF05889_consen 194 YGVQSSKCMHLIQQAWRVGR--VDAFVQSTDKNFMVPVGGAIMA 235 (389)
T ss_dssp TTTT-HHHHHHHHHHHHHST--CSEEEEEHHHHHCEESSHEEEE
T ss_pred hhhhHHHHHHHHHHHHhcCC--cceeeeecCCCEEecCCCcEEE
Confidence 777 87 6888888899999999999543
No 378
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=95.28 E-value=0.15 Score=54.51 Aligned_cols=101 Identities=16% Similarity=0.174 Sum_probs=71.4
Q ss_pred HHHHHHHHHHcCCC------CCcEEEecc-CchHHHHHH---------------------HHHHcCCEEEEEec-cCCcc
Q 007454 173 SAMKKRIMDFLNIS------ENDYVYDYE-SEAVEAMIR---------------------TSEKRGARVMSAEF-SWPRL 223 (603)
Q Consensus 173 ~~aR~~Ia~~lna~------~~e~vf~~e-s~sV~~~~~---------------------~a~~~Ga~V~~~~~-~~~~g 223 (603)
..||++||+++|-+ +++++.+.. ++++.-.+. .|.-.|.+|++..+ ...+.
T Consensus 106 ~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~w 185 (447)
T KOG0259|consen 106 LPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDW 185 (447)
T ss_pred HHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccc
Confidence 47999999998854 445554422 233332222 23446777887765 22345
Q ss_pred ccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH---HH-HHHHhCCcEEEEec
Q 007454 224 RINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL---WM-RIAQENDWHILIDA 279 (603)
Q Consensus 224 ~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~---~i-~~a~e~g~~vlvDA 279 (603)
+||++.++.++.+ +|.-+++---+|..|.+|+.+ .+ +.|++.|+.|+-|=
T Consensus 186 eIDL~~veal~DE------NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDE 239 (447)
T KOG0259|consen 186 EIDLDGVEALADE------NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADE 239 (447)
T ss_pred eechHHHHHhhcc------CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehh
Confidence 8999999999975 677777777899999999986 33 36899999999985
No 379
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=94.52 E-value=3.4 Score=43.30 Aligned_cols=85 Identities=14% Similarity=0.117 Sum_probs=60.3
Q ss_pred CCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEeccccCCCCCCCCCCCC----CCCcE-EEEcccccCCCCC
Q 007454 242 KQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDACALGPKDMDSFGLSL----VRPDF-LICSFYQIFGENP 312 (603)
Q Consensus 242 ~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAaq~~~~~m~~ldls~----~~~Df-lv~S~hK~fG~~P 312 (603)
..++.++|+--.|.||.+.-=+++ ++|+++|+.+++|-+-.+|- -.+..++ |+... +++|.-|..- |-
T Consensus 178 e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PF--P~iifsd~~~~w~~NiilC~SLSK~GL-PG 254 (417)
T COG3977 178 ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPF--PGIIFSDATPLWNENIILCMSLSKLGL-PG 254 (417)
T ss_pred cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCC--CceecccccccCCCCEEEEeehhhcCC-CC
Confidence 479999999999999998776654 25899999999999877765 2344443 45554 5667778543 32
Q ss_pred CceEEEEEeCCCCcCcC
Q 007454 313 SGFGCLFVKKSTVPILV 329 (603)
Q Consensus 313 ~G~G~L~vkk~~~~~L~ 329 (603)
.-+|..+....++..+.
T Consensus 255 ~R~GIiIane~viqait 271 (417)
T COG3977 255 SRCGIIIANEKVIQAIT 271 (417)
T ss_pred cceeEEEccHHHHHHHH
Confidence 34788887777765444
No 380
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=94.38 E-value=3.1 Score=45.77 Aligned_cols=94 Identities=19% Similarity=0.276 Sum_probs=61.2
Q ss_pred CHHHHHHHHhhcCCCCCC-eeEEEEeCccccccccccHH----HH-HHHHhCCcEEEEeccc------cCCCCCCCCCCC
Q 007454 226 NSEKLRKMVVSKGKKKKQ-RGLFVFPLHSRMTGARYPYL----WM-RIAQENDWHILIDACA------LGPKDMDSFGLS 293 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~-t~Lv~~~~~Sn~TG~~~pl~----~i-~~a~e~g~~vlvDAaq------~~~~~m~~ldls 293 (603)
|.+.|++++... ..+ ..+++=|.+.| -|.+.|-+ .+ ++++++|+.+++|=+= ++|-. .-.+
T Consensus 186 D~~al~~~~~~~---g~~IAaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq-~~~g-- 258 (432)
T COG0001 186 DLEALEEAFEEY---GDDIAAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQ-GYYG-- 258 (432)
T ss_pred CHHHHHHHHHHc---CCcEEEEEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccc-cccC--
Confidence 678888888752 123 35666677777 68888865 23 3689999999999542 22221 1222
Q ss_pred CCCCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCC
Q 007454 294 LVRPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVD 330 (603)
Q Consensus 294 ~~~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p 330 (603)
..||+.++ =|+.|+ --=+|++-.|+++++.+.|
T Consensus 259 -i~PDlttl--GKiIGG-GlP~ga~gGr~eiM~~~~p 291 (432)
T COG0001 259 -VEPDLTTL--GKIIGG-GLPIGAFGGRAEIMEQLAP 291 (432)
T ss_pred -cCcchhhh--hhhhcC-CcceeeeccHHHHHhhhCC
Confidence 35888765 487653 1127899899999876554
No 381
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=94.20 E-value=2.6 Score=43.32 Aligned_cols=67 Identities=12% Similarity=0.160 Sum_probs=53.3
Q ss_pred cCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHHHHHHh--CCcEEEEecc
Q 007454 209 RGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWMRIAQE--NDWHILIDAC 280 (603)
Q Consensus 209 ~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i~~a~e--~g~~vlvDAa 280 (603)
.+++|+-+|.. |+..++.+.+.+.+..+ ...+++-++.-.|.||.+...+-|...-| -+..|+||-|
T Consensus 131 Nd~eVvkvpl~-pdF~lnvdai~evl~~d----s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEA 199 (375)
T KOG0633|consen 131 NDAEVVKVPLN-PDFSLNVDAIAEVLELD----SKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEA 199 (375)
T ss_pred CCceEEEecCC-CCccccHHHHHHHHhcc----ccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeee
Confidence 47899999987 78889999998888743 35788889999999999999986654433 3578888864
No 382
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=93.39 E-value=1.9 Score=46.62 Aligned_cols=82 Identities=15% Similarity=0.126 Sum_probs=51.8
Q ss_pred eeEEEEeCccccccccccHH----HH-HHHHhCCcEEEEeccccC----CCCCCCCCCCCCCCcEEEEcccccCCCCCCc
Q 007454 244 RGLFVFPLHSRMTGARYPYL----WM-RIAQENDWHILIDACALG----PKDMDSFGLSLVRPDFLICSFYQIFGENPSG 314 (603)
Q Consensus 244 t~Lv~~~~~Sn~TG~~~pl~----~i-~~a~e~g~~vlvDAaq~~----~~~m~~ldls~~~~Dflv~S~hK~fG~~P~G 314 (603)
..-|..-..+-+-|++.+.. .+ +.++++|..++.|=+|.+ |+ |--++-...-||.++. -|-.|. -.=
T Consensus 213 vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~-~wgfe~h~v~PDIvTm--AKgiGn-G~P 288 (442)
T KOG1404|consen 213 VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGH-MWGFESHGVVPDIVTM--AKGIGN-GFP 288 (442)
T ss_pred eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccc-cccccccCCCccHHHH--HhhccC-CCc
Confidence 44444445556778888754 33 357899999999998866 32 3333333445787654 476552 233
Q ss_pred eEEEEEeCCCCcCcC
Q 007454 315 FGCLFVKKSTVPILV 329 (603)
Q Consensus 315 ~G~L~vkk~~~~~L~ 329 (603)
+|+.+..+++.+.|.
T Consensus 289 l~AVvtt~EIa~v~~ 303 (442)
T KOG1404|consen 289 LGAVVTTPEIADVLN 303 (442)
T ss_pred ceeeecCHHHHHHHH
Confidence 788888777765554
No 383
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=92.73 E-value=0.85 Score=51.88 Aligned_cols=75 Identities=19% Similarity=0.182 Sum_probs=48.6
Q ss_pred eeEEEEeCccccccccccHHHH-HHHHhCCcEEEEeccccCCCCCCCCCCCCCCCcEEEEccccc-----CCCCCCceEE
Q 007454 244 RGLFVFPLHSRMTGARYPYLWM-RIAQENDWHILIDACALGPKDMDSFGLSLVRPDFLICSFYQI-----FGENPSGFGC 317 (603)
Q Consensus 244 t~Lv~~~~~Sn~TG~~~pl~~i-~~a~e~g~~vlvDAaq~~~~~m~~ldls~~~~Dflv~S~hK~-----fG~~P~G~G~ 317 (603)
-.||-+|. .-|.+.|+..+ +.|+.+|.+|++ |+-+..-.|. =.-.++++|..+.|..++ ||+ | ..|+
T Consensus 250 gvlvQYP~---t~G~i~d~~el~~~a~~~~s~vv~-atDLLaLtiL-rpPgefGaDIavGSsQRFGVPlGYGG-P-HAaF 322 (1001)
T KOG2040|consen 250 GVLVQYPD---TEGSVLDFDELVELAHANGSLVVM-ATDLLALTIL-RPPGEFGADIAVGSSQRFGVPLGYGG-P-HAAF 322 (1001)
T ss_pred EEEEEcCC---CCCcccCHHHHHHHhhccCceEEE-eehhhHHHcc-CChhhcCceeeeccccccCccccCCC-c-hHHH
Confidence 35666665 47999999854 689999999655 4434332111 112368999999999996 343 2 3556
Q ss_pred EEEeCCCC
Q 007454 318 LFVKKSTV 325 (603)
Q Consensus 318 L~vkk~~~ 325 (603)
+.++.++.
T Consensus 323 fAv~~~l~ 330 (1001)
T KOG2040|consen 323 FAVSESLV 330 (1001)
T ss_pred HHHHHHHH
Confidence 66665543
No 384
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=92.73 E-value=2.6 Score=44.38 Aligned_cols=108 Identities=19% Similarity=0.239 Sum_probs=65.3
Q ss_pred HHHcCCE-EEEEeccC--CccccCHHHHHHHHhhcCCCCCCeeEEEEeCc-cccccccccHH-HHHHH---HhCCcEEEE
Q 007454 206 SEKRGAR-VMSAEFSW--PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLH-SRMTGARYPYL-WMRIA---QENDWHILI 277 (603)
Q Consensus 206 a~~~Ga~-V~~~~~~~--~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~-Sn~TG~~~pl~-~i~~a---~e~g~~vlv 277 (603)
.++.|+. |..-++ | ..-.+|.+.+..-|.. .+...++.+.+. .|.||.-..=+ |..+| ++.+-..+.
T Consensus 142 f~~aGf~tv~~Y~y-Wd~~~k~~d~e~~Lsdl~~----APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fF 216 (410)
T KOG1412|consen 142 FEKAGFTTVATYPY-WDAENKCVDLEGFLSDLES----APEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFF 216 (410)
T ss_pred HHHcCCceeeeeee-ecCCCceecHHHHHHHHhh----CCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeee
Confidence 4566743 333332 3 2345676666666653 234566666655 89999855544 87654 567888899
Q ss_pred ecc-ccCCCCCCCCCCCCC--------CCc-EEEEcccccCCCCCCceEEEEE
Q 007454 278 DAC-ALGPKDMDSFGLSLV--------RPD-FLICSFYQIFGENPSGFGCLFV 320 (603)
Q Consensus 278 DAa-q~~~~~m~~ldls~~--------~~D-flv~S~hK~fG~~P~G~G~L~v 320 (603)
|-+ |-... ..+|-+.| +.. |++=||-|=||.+-.-+|+|-|
T Consensus 217 DiAYQGfAS--GD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltv 267 (410)
T KOG1412|consen 217 DIAYQGFAS--GDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTV 267 (410)
T ss_pred ehhhccccc--CCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEE
Confidence 976 55544 34444332 333 5666999977744446888754
No 385
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=92.58 E-value=0.79 Score=49.01 Aligned_cols=82 Identities=13% Similarity=0.201 Sum_probs=51.1
Q ss_pred eEEEEeCccccccccccH-HHH----HHHHhCCcEEEEeccccCC-CC--CCCCCCCCCCCcEEEEcccccCCCCCCceE
Q 007454 245 GLFVFPLHSRMTGARYPY-LWM----RIAQENDWHILIDACALGP-KD--MDSFGLSLVRPDFLICSFYQIFGENPSGFG 316 (603)
Q Consensus 245 ~Lv~~~~~Sn~TG~~~pl-~~i----~~a~e~g~~vlvDAaq~~~-~~--m~~ldls~~~~Dflv~S~hK~fG~~P~G~G 316 (603)
.+++=|.+. ..|.+.|= +++ ++|+++|+++++|=+|.+- .. +-..+...+.||+++++ |-+|+. --+|
T Consensus 180 avivEPi~g-~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG-~p~s 255 (339)
T PF00202_consen 180 AVIVEPIQG-EGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFG--KGLGGG-LPIS 255 (339)
T ss_dssp EEEEESSBT-TTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTT-SSEE
T ss_pred EEEEecccc-ccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccccc--cchhhh-hhcc
Confidence 445555444 46776653 343 3689999999999877642 21 11122234679999998 865431 2389
Q ss_pred EEEEeCCCCcCcCC
Q 007454 317 CLFVKKSTVPILVD 330 (603)
Q Consensus 317 ~L~vkk~~~~~L~p 330 (603)
++++++++++.+.+
T Consensus 256 av~~~~~i~~~~~~ 269 (339)
T PF00202_consen 256 AVLGSEEIMEAFQP 269 (339)
T ss_dssp EEEEEHHHHTTSCT
T ss_pred cccccchhhccccc
Confidence 99999988765543
No 386
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=89.44 E-value=1.7 Score=47.43 Aligned_cols=77 Identities=18% Similarity=0.303 Sum_probs=57.8
Q ss_pred HHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCC----CCCeeEEEEeCccccccccccHH----HHHHHHhCCc
Q 007454 202 MIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKK----KKQRGLFVFPLHSRMTGARYPYL----WMRIAQENDW 273 (603)
Q Consensus 202 ~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~----~~~t~Lv~~~~~Sn~TG~~~pl~----~i~~a~e~g~ 273 (603)
.++..+..|+++..++.+ .--++.+.|++.+...+.. .+..-|.++|.-.|.||..++++ ++.+||+++.
T Consensus 161 AL~s~~a~gv~~ipv~md--~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDf 238 (472)
T KOG0634|consen 161 ALQSMEALGVKIIPVKMD--QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDF 238 (472)
T ss_pred HHHhccccCceEEecccc--CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCE
Confidence 345556779777777665 3457899999988753211 22457999999999999999996 3468999999
Q ss_pred EEEEecc
Q 007454 274 HILIDAC 280 (603)
Q Consensus 274 ~vlvDAa 280 (603)
+++-|=.
T Consensus 239 LIVeDdp 245 (472)
T KOG0634|consen 239 LIVEDDP 245 (472)
T ss_pred EEEecCc
Confidence 9998853
No 387
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=88.91 E-value=2.4 Score=45.34 Aligned_cols=97 Identities=20% Similarity=0.198 Sum_probs=59.3
Q ss_pred ccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH--HH----HHHHhCCcEEEEeccccCCCC----CCCCC
Q 007454 222 RLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL--WM----RIAQENDWHILIDACALGPKD----MDSFG 291 (603)
Q Consensus 222 ~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~--~i----~~a~e~g~~vlvDAaq~~~~~----m~~ld 291 (603)
.|.+|.++|+++|.... ..+.-.++.+.-+|..| =||+. -| ++|+++++.|+.|||-.+--. +..-+
T Consensus 166 KGd~D~~kLe~lidevG--~~nvp~I~~tiT~Nsag-GQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~g 242 (471)
T COG3033 166 KGNFDLEKLERLIDEVG--ADNVPYIVLTITNNSAG-GQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPG 242 (471)
T ss_pred CCccCHHHHHHHHHHhC--cccCcEEEEEEeccccC-CCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcc
Confidence 37799999999998531 22455666666666555 35654 23 268999999999997554210 11222
Q ss_pred CCC-----------CCCcEEEEccccc-CCCCCCceEEEEEeCCC
Q 007454 292 LSL-----------VRPDFLICSFYQI-FGENPSGFGCLFVKKST 324 (603)
Q Consensus 292 ls~-----------~~~Dflv~S~hK~-fG~~P~G~G~L~vkk~~ 324 (603)
-.. .-+|-.+.|+-|= +- +. -|+|-.|.+.
T Consensus 243 Yrd~sI~~IarEm~sYaD~~~mS~KKD~lv--nm-GGfl~~~D~~ 284 (471)
T COG3033 243 YRDWSIEEIAREMYSYADGCTMSAKKDGLV--NM-GGFLCFKDDS 284 (471)
T ss_pred cccccHHHHHHHHHhhhhhheeecccccee--cc-ccEEEecCcc
Confidence 222 2488999999983 22 22 1455566653
No 388
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=82.61 E-value=12 Score=40.54 Aligned_cols=109 Identities=16% Similarity=0.151 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHcCC------CCCcEEEecc-CchHHHHHHHHH---HcC-------------------CEEEEEeccC-
Q 007454 171 LESAMKKRIMDFLNI------SENDYVYDYE-SEAVEAMIRTSE---KRG-------------------ARVMSAEFSW- 220 (603)
Q Consensus 171 ~~~~aR~~Ia~~lna------~~~e~vf~~e-s~sV~~~~~~a~---~~G-------------------a~V~~~~~~~- 220 (603)
-++-+|+.||+|+-. +|++|..+.. |.++..+....- +.| +..+.--++.
T Consensus 114 Gv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe 193 (475)
T KOG0258|consen 114 GVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEE 193 (475)
T ss_pred CChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCcccceeeccc
Confidence 356789999999864 3455544432 445554443321 112 1111111111
Q ss_pred CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHHHH----HHHHhCCcEEEEecc
Q 007454 221 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYLWM----RIAQENDWHILIDAC 280 (603)
Q Consensus 221 ~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~~i----~~a~e~g~~vlvDAa 280 (603)
.+..++.++|++.+..-+ +.-+.++.++----|.||.++.-+-| ..|++.|..++-|-+
T Consensus 194 ~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEV 256 (475)
T KOG0258|consen 194 SNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEV 256 (475)
T ss_pred cCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHH
Confidence 233678999999987643 22355666666667999999887533 458899999999975
No 389
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=82.59 E-value=53 Score=35.48 Aligned_cols=76 Identities=22% Similarity=0.389 Sum_probs=50.4
Q ss_pred CHHHHHHHHhhcCCC-CCCeeEEEEeCccccccccc--c--HHHHH-HHHhCCcEEEEeccccCCCC------CCCCCCC
Q 007454 226 NSEKLRKMVVSKGKK-KKQRGLFVFPLHSRMTGARY--P--YLWMR-IAQENDWHILIDACALGPKD------MDSFGLS 293 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~-~~~t~Lv~~~~~Sn~TG~~~--p--l~~i~-~a~e~g~~vlvDAaq~~~~~------m~~ldls 293 (603)
|+++.+.+|...+++ .+-.++++=|-|| +-|--+ | .+.+. +++++|+-++||-+|.++-. ..-.+|+
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQs-EGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~ 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQS-EGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhc-cCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCC
Confidence 567788888764433 3456788888887 344322 2 23443 68999999999999877531 0235554
Q ss_pred CCCCcEEEEc
Q 007454 294 LVRPDFLICS 303 (603)
Q Consensus 294 ~~~~Dflv~S 303 (603)
..||+++||
T Consensus 333 -~PpD~vTFS 341 (484)
T KOG1405|consen 333 -SPPDVVTFS 341 (484)
T ss_pred -CCccceehh
Confidence 479999987
No 390
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=81.83 E-value=87 Score=34.43 Aligned_cols=98 Identities=17% Similarity=0.209 Sum_probs=61.7
Q ss_pred CHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH--HH----HHHHhCCcEEEEeccccC-CCCCCCCCCC---CC
Q 007454 226 NSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL--WM----RIAQENDWHILIDACALG-PKDMDSFGLS---LV 295 (603)
Q Consensus 226 ~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~--~i----~~a~e~g~~vlvDAaq~~-~~~m~~ldls---~~ 295 (603)
|+++|++.+..++. .=-.+++=|.| -.-| +.|++ .+ .+|+++|+.|+.|=.|.+ +.. ..+-.. ..
T Consensus 192 d~t~l~k~~~~h~~--~IaAVIvEPiq-GaGG-~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~-g~~~a~e~~~~ 266 (433)
T KOG1401|consen 192 DSTALEKLFESHKG--EIAAVIVEPIQ-GAGG-IIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRL-GYGWAQEYFGV 266 (433)
T ss_pred CHHHHHHHHHhCCC--ceEEEEEeccc-CCCC-cccCCHHHHHHHHHHHhhcCceEEeehhhhCcccc-chHHHHHHhCc
Confidence 68899999986421 11356666666 3344 45553 22 268899999999998876 431 111111 14
Q ss_pred CCcEEEEcccccCCCCCCceEEEEEeCCCCcCcCCC
Q 007454 296 RPDFLICSFYQIFGENPSGFGCLFVKKSTVPILVDN 331 (603)
Q Consensus 296 ~~Dflv~S~hK~fG~~P~G~G~L~vkk~~~~~L~p~ 331 (603)
.||.+++ =|.+|+ --=+|+..++..+++.+.|.
T Consensus 267 ~PDI~t~--aK~L~g-GlPigA~~v~~kV~~~i~~~ 299 (433)
T KOG1401|consen 267 TPDITTV--AKPLGG-GLPIGATGVRDKVAEMISPG 299 (433)
T ss_pred CCcceee--hhhccC-CceeEEEeehHHHHhhcCCC
Confidence 6897765 465543 12389999999998777653
No 391
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=78.24 E-value=18 Score=39.21 Aligned_cols=106 Identities=18% Similarity=0.255 Sum_probs=62.6
Q ss_pred HHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccc--ccc--HHHHH----HHH--hCCcEE
Q 007454 206 SEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGA--RYP--YLWMR----IAQ--ENDWHI 275 (603)
Q Consensus 206 a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~--~~p--l~~i~----~a~--e~g~~v 275 (603)
+++.|.+...+++. ++|.+|.+.+++.|+. +|++|.+- +-.|. +.+ ++.|+ .+| ..++.+
T Consensus 124 L~e~Gi~Y~~v~L~-~dg~~D~~~i~~~~~~------~tk~v~IQ---RSrGYs~R~sl~i~~I~~~i~~vk~~~p~~ii 193 (403)
T PF06838_consen 124 LKEFGIKYREVPLT-EDGTIDWEAIKKALKP------NTKMVLIQ---RSRGYSWRPSLTIEEIKEIIKFVKEINPDVII 193 (403)
T ss_dssp TGGGT-EEEE--B--TTSSB-HHHHHHHHHT------TEEEEEEE----S-TTSSS----HHHHHHHHHHHHHH-TTSEE
T ss_pred hHHhCceeEEEeec-CCCCcCHHHHHHhhcc------CceEEEEe---cCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEE
Confidence 46779999999998 6899999999999984 68998876 33453 322 33443 334 468999
Q ss_pred EEecc--ccCCCCCCCCCCCCCCCcEEEEcccccCCC--CCCceEEEEEeCCCCc
Q 007454 276 LIDAC--ALGPKDMDSFGLSLVRPDFLICSFYQIFGE--NPSGFGCLFVKKSTVP 326 (603)
Q Consensus 276 lvDAa--q~~~~~m~~ldls~~~~Dflv~S~hK~fG~--~P~G~G~L~vkk~~~~ 326 (603)
+||-| -++-+. .|. +.++|.++.|.-|=-|+ -|+ =|.+..|+++.+
T Consensus 194 fVDNCYGEFvE~~-EP~---~vGADl~aGSLIKNpGGgiApt-GGYIaGr~~lVe 243 (403)
T PF06838_consen 194 FVDNCYGEFVETQ-EPT---EVGADLMAGSLIKNPGGGIAPT-GGYIAGRKDLVE 243 (403)
T ss_dssp EEE-TTTTTTSSS--GG---GGT-SEEEEETTSGGGTTT-SS--EEEEESHHHHH
T ss_pred EEeCCcceecccc-Ccc---ccchhheeccceeCCCCCccCc-CCEEechHHHHH
Confidence 99987 222221 333 45899999999995432 133 255666766654
No 392
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=45.04 E-value=61 Score=34.31 Aligned_cols=91 Identities=14% Similarity=0.224 Sum_probs=62.3
Q ss_pred HHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccc--cc--cHHHHH----HHHh--CCcE
Q 007454 205 TSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGA--RY--PYLWMR----IAQE--NDWH 274 (603)
Q Consensus 205 ~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~--~~--pl~~i~----~a~e--~g~~ 274 (603)
.+++.|.+-.-+++. ++|+||.+.++..|+. +|+|+.+- +-.|. +. ++..|+ ..++ .++.
T Consensus 134 SL~dfgi~Y~~v~Lt-~~gkiD~~~v~~~i~~------~tkli~IQ---RS~GY~~RpS~~I~eI~~~i~~vk~inpn~i 203 (416)
T COG4100 134 SLKDFGIKYKAVPLT-ADGKIDIQAVKTAISD------RTKLIGIQ---RSKGYAWRPSLSIAEIEEMITFVKEINPNVI 203 (416)
T ss_pred cHHHhCcceeecccc-cCCcccHHHHHHhcCc------cceEEEEE---eccCcCCCCcccHHHHHHHHHHHHhcCCCEE
Confidence 456778888888887 5899999999999974 79998875 33443 22 233333 3343 5789
Q ss_pred EEEecc--ccCCCCCCCCCCCCCCCcEEEEcccccCC
Q 007454 275 ILIDAC--ALGPKDMDSFGLSLVRPDFLICSFYQIFG 309 (603)
Q Consensus 275 vlvDAa--q~~~~~m~~ldls~~~~Dflv~S~hK~fG 309 (603)
|.||-| -++- ...-...++|.++.|.-|--|
T Consensus 204 vFVDNCYGEFvE----~~EPt~vGaDliAGSLIKNpG 236 (416)
T COG4100 204 VFVDNCYGEFVE----EKEPTHVGADLIAGSLIKNPG 236 (416)
T ss_pred EEEeccchhhhh----ccCccccchhhhccceeeCCC
Confidence 999987 2222 222234578999999999543
No 393
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=22.88 E-value=5e+02 Score=22.43 Aligned_cols=89 Identities=15% Similarity=0.154 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHcCCEEEEEeccCCccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccHH-HHHHHHhC--CcE
Q 007454 198 AVEAMIRTSEKRGARVMSAEFSWPRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPYL-WMRIAQEN--DWH 274 (603)
Q Consensus 198 sV~~~~~~a~~~Ga~V~~~~~~~~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl~-~i~~a~e~--g~~ 274 (603)
.+..+..++++.|.+|..+... ++.+++.+.+... +..++.++.. .+....... .++.+|+. ++.
T Consensus 16 Gl~~la~~l~~~G~~v~~~d~~-----~~~~~l~~~~~~~-----~pd~V~iS~~--~~~~~~~~~~l~~~~k~~~p~~~ 83 (121)
T PF02310_consen 16 GLLYLAAYLRKAGHEVDILDAN-----VPPEELVEALRAE-----RPDVVGISVS--MTPNLPEAKRLARAIKERNPNIP 83 (121)
T ss_dssp HHHHHHHHHHHTTBEEEEEESS-----B-HHHHHHHHHHT-----TCSEEEEEES--SSTHHHHHHHHHHHHHTTCTTSE
T ss_pred HHHHHHHHHHHCCCeEEEECCC-----CCHHHHHHHHhcC-----CCcEEEEEcc--CcCcHHHHHHHHHHHHhcCCCCE
Confidence 4555677788899999998764 3457888877652 4566777542 233333333 34456654 788
Q ss_pred EEEeccc--cCCCCCCCCCCCC-CCCcEEEE
Q 007454 275 ILIDACA--LGPKDMDSFGLSL-VRPDFLIC 302 (603)
Q Consensus 275 vlvDAaq--~~~~~m~~ldls~-~~~Dflv~ 302 (603)
+++=+.+ ..+. .+ ++. .++|+++.
T Consensus 84 iv~GG~~~t~~~~---~~-l~~~~~~D~vv~ 110 (121)
T PF02310_consen 84 IVVGGPHATADPE---EI-LREYPGIDYVVR 110 (121)
T ss_dssp EEEEESSSGHHHH---HH-HHHHHTSEEEEE
T ss_pred EEEECCchhcChH---HH-hccCcCcceecC
Confidence 8875533 2222 11 222 46787765
No 394
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=21.93 E-value=1.9e+02 Score=30.82 Aligned_cols=59 Identities=15% Similarity=0.219 Sum_probs=37.0
Q ss_pred CccccCHHHHHHHHhhcCCCCCCeeEEEEeCccccccccccH--HHHHHHHhCCcEEEEecc
Q 007454 221 PRLRINSEKLRKMVVSKGKKKKQRGLFVFPLHSRMTGARYPY--LWMRIAQENDWHILIDAC 280 (603)
Q Consensus 221 ~~g~i~~~~L~~~l~~~~~~~~~t~Lv~~~~~Sn~TG~~~pl--~~i~~a~e~g~~vlvDAa 280 (603)
+...|+.++++..+..-++.-..--+|++. -|=.-|.-.++ +|+++++++|+.|++|.+
T Consensus 107 ~Gp~is~~~~~~~l~~~~~~l~~~d~Vvls-GSlP~g~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 107 PGPEISEAELEQFLEQLKALLESDDIVVLS-GSLPPGVPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CCCCCCHHHHHHHHHHHHHhcccCCEEEEe-CCCCCCCCHHHHHHHHHHHHhcCCeEEEECC
Confidence 455677777777655321111123344443 45556666665 378899999999999986
No 395
>PF08915 tRNA-Thr_ED: Archaea-specific editing domain of threonyl-tRNA synthetase; InterPro: IPR015011 Archaea-specific editing domain of threonyl-tRNA synthetase, with marked structural similarity to D-amino acids deacylases found in eubacteria and eukaryotes. This domain can bind D-amino acids, and ensures high fidelity during translation. It is especially responsible for removing incorrectly attached serine from tRNA-Thr. The domain forms a fold that can be defined as two layers of beta-sheets (a three-stranded sheet and a five-stranded sheet), with two alpha-helices located adjacent to the five-stranded sheet []. ; GO: 0004829 threonine-tRNA ligase activity, 0005524 ATP binding, 0008270 zinc ion binding, 0005737 cytoplasm; PDB: 3PD4_B 3PD3_A 2HL0_A 2HL1_A 2HKZ_A 3PD5_B 2HL2_A 3PD2_B 1Y2Q_A.
Probab=20.25 E-value=2.4e+02 Score=26.37 Aligned_cols=51 Identities=22% Similarity=0.411 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHcC-CCCCcE-EEeccC--c-------h---HHHHHHHHHHcCCEEEEEeccC
Q 007454 170 GLESAMKKRIMDFLN-ISENDY-VYDYES--E-------A---VEAMIRTSEKRGARVMSAEFSW 220 (603)
Q Consensus 170 ~~~~~aR~~Ia~~ln-a~~~e~-vf~~es--~-------s---V~~~~~~a~~~Ga~V~~~~~~~ 220 (603)
.+++++-+.|.+.++ +..+.+ +|.|-| . + +..+.+.+++.|.+|..+||.|
T Consensus 54 ~vv~~av~eI~~~a~kv~~~~ivlyPyAHLSs~La~P~~A~~iL~~le~~L~~~g~eV~raPFGw 118 (138)
T PF08915_consen 54 GVVEKAVEEIKWVAKKVKAKRIVLYPYAHLSSSLASPDVAVEILKKLEERLKSRGFEVYRAPFGW 118 (138)
T ss_dssp HHHHHHHHHHHHHHHHTT-SEEEEEE-GGGSSSB--HHHHHHHHHHHHHHHHHTT-EEEE--TTE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeCcccccCCcCChHHHHHHHHHHHHHHHhCCCeEEEeCCcc
Confidence 467777777776665 455665 455433 1 1 3334455568999999999988
Done!