BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007455
(603 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/273 (45%), Positives = 183/273 (67%), Gaps = 4/273 (1%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRG 374
++++G GGFG VY+ + D AVKR+ R +G + F+ E+E++ H NL+ LRG
Sbjct: 43 KNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRG 102
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+C P +LL+Y Y++ GS+ L E E Q L+W R +IALGSARGLAYLH C PK
Sbjct: 103 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 162
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
IIHRD+K++NILLDE E V DFGLAKL+ ++ HV V GT G++APEYL +G+++E
Sbjct: 163 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSE 222
Query: 495 KSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVV--GWMNTLLKENRLEDVIDKRC-ADAD 551
K+DV+ +GV+LLEL+TG+R D + +V+ W+ LLKE +LE ++D +
Sbjct: 223 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK 282
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
E VE ++++A CT ++P +RP M++V+++LE
Sbjct: 283 DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 122/273 (44%), Positives = 182/273 (66%), Gaps = 4/273 (1%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRG 374
++++G GGFG VY+ + D AVKR+ R +G + F+ E+E++ H NL+ LRG
Sbjct: 35 KNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+C P +LL+Y Y++ GS+ L E E Q L+W R +IALGSARGLAYLH C PK
Sbjct: 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
IIHRD+K++NILLDE E V DFGLAKL+ ++ HV V G G++APEYL +G+++E
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSE 214
Query: 495 KSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVV--GWMNTLLKENRLEDVIDKRC-ADAD 551
K+DV+ +GV+LLEL+TG+R D + +V+ W+ LLKE +LE ++D +
Sbjct: 215 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK 274
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
E VE ++++A CT ++P +RP M++V+++LE
Sbjct: 275 DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 166/311 (53%), Gaps = 5/311 (1%)
Query: 276 RYTEVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDC 335
+Y++ ++ S+ + P ++ E D + ++G G FG VY+ V+ D
Sbjct: 4 KYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG 63
Query: 336 GTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLD 395
A+KR + FE E+E L +H +LV+L G+C +LIY Y+ G+L
Sbjct: 64 AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123
Query: 396 DFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHV 455
L+ ++W RL+I +G+ARGL YLH IIHRD+KS NILLDEN P +
Sbjct: 124 RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKI 180
Query: 456 SDFGLAKLLVD-EEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+DFG++K + ++ H+ VV GT GY+ PEY GR TEKSDVYSFGV+L E++ +
Sbjct: 181 TDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA 240
Query: 515 TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADA-DMETVEAILEIAARCTDANPDDR 573
+ + +N+ W +LE ++D AD E++ + A +C + +DR
Sbjct: 241 IVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDR 300
Query: 574 PSMNQVLQLLE 584
PSM VL LE
Sbjct: 301 PSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 165/311 (53%), Gaps = 5/311 (1%)
Query: 276 RYTEVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDC 335
+Y++ ++ S+ + P ++ E D + ++G G FG VY+ V+ D
Sbjct: 4 KYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG 63
Query: 336 GTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLD 395
A+KR + FE E+E L +H +LV+L G+C +LIY Y+ G+L
Sbjct: 64 AKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123
Query: 396 DFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHV 455
L+ ++W RL+I +G+ARGL YLH IIHRD+KS NILLDEN P +
Sbjct: 124 RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKI 180
Query: 456 SDFGLAKLLVD-EEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+DFG++K + + H+ VV GT GY+ PEY GR TEKSDVYSFGV+L E++ +
Sbjct: 181 TDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA 240
Query: 515 TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADA-DMETVEAILEIAARCTDANPDDR 573
+ + +N+ W +LE ++D AD E++ + A +C + +DR
Sbjct: 241 IVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDR 300
Query: 574 PSMNQVLQLLE 584
PSM VL LE
Sbjct: 301 PSMGDVLWKLE 311
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 158/279 (56%), Gaps = 18/279 (6%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKR----IDRSREGSDQVFERELEILGSIKHINLVNLRG 374
+G GGFG VY+ +N+ T AVK+ +D + E Q F++E++++ +H NLV L G
Sbjct: 39 MGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ L+Y Y+ GSL D L +G L+W R KIA G+A G+ +LH +
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLHEN---H 153
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV----VAGTFGYLAPEYLQSG 490
IHRDIKS+NILLDE +SDFGLA+ E TV + GT Y+APE L+ G
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARA---SEKFAQTVMXXRIVGTTAYMAPEALR-G 209
Query: 491 RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADA 550
T KSD+YSFGV+LLE++TG P + L + +E +ED IDK+ DA
Sbjct: 210 EITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA 268
Query: 551 DMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589
D +VEA+ +A++C + RP + +V QLL++ S
Sbjct: 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 158/279 (56%), Gaps = 18/279 (6%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKR----IDRSREGSDQVFERELEILGSIKHINLVNLRG 374
+G GGFG VY+ +N+ T AVK+ +D + E Q F++E++++ +H NLV L G
Sbjct: 39 MGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ L+Y Y+ GSL D L +G L+W R KIA G+A G+ +LH +
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLHEN---H 153
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV----VAGTFGYLAPEYLQSG 490
IHRDIKS+NILLDE +SDFGLA+ E TV + GT Y+APE L+ G
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARA---SEKFAQTVMXSRIVGTTAYMAPEALR-G 209
Query: 491 RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADA 550
T KSD+YSFGV+LLE++TG P + L + +E +ED IDK+ DA
Sbjct: 210 EITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA 268
Query: 551 DMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589
D +VEA+ +A++C + RP + +V QLL++ S
Sbjct: 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 156/276 (56%), Gaps = 12/276 (4%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKR----IDRSREGSDQVFERELEILGSIKHINLVNLRG 374
+G GGFG VY+ +N+ T AVK+ +D + E Q F++E++++ +H NLV L G
Sbjct: 33 MGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ L+Y Y+ GSL D L +G L+W R KIA G+A G+ +LH +
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLHEN---H 147
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV-VAGTFGYLAPEYLQSGRAT 493
IHRDIKS+NILLDE +SDFGLA+ V + GT Y+APE L+ G T
Sbjct: 148 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEIT 206
Query: 494 EKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADME 553
KSD+YSFGV+LLE++TG P + L + +E +ED IDK+ DAD
Sbjct: 207 PKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST 265
Query: 554 TVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589
+VEA+ +A++C + RP + +V QLL++ S
Sbjct: 266 SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query: 320 GSGGFGTVYRMVMNDCGTFAVKR----IDRSREGSDQVFERELEILGSIKHINLVNLRGY 375
G GGFG VY+ +N+ T AVK+ +D + E Q F++E+++ +H NLV L G+
Sbjct: 31 GEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
L+Y Y GSL D L +G L+W R KIA G+A G+ +LH +
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWHXRCKIAQGAANGINFLHEN---HH 145
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVT-TVVAGTFGYLAPEYLQSGRATE 494
IHRDIKS+NILLDE +SDFGLA+ V + + GT Y APE L+ G T
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITP 204
Query: 495 KSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMET 554
KSD+YSFGV+LLE++TG P + L + +E +ED IDK+ DAD +
Sbjct: 205 KSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTS 263
Query: 555 VEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589
VEA +A++C + RP + +V QLL++ S
Sbjct: 264 VEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTAS 298
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 157/311 (50%), Gaps = 32/311 (10%)
Query: 289 STKLITFHG-----DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRI 343
+T+ + F G DM P C+ L+ ++ +G+G FGTV+R + AVK +
Sbjct: 17 TTENLYFQGAMDGDDMDIPWCD-------LNIKEKIGAGSFGTVHRAEWHGSDV-AVKIL 68
Query: 344 DRSREGSDQV--FERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEH 401
+++V F RE+ I+ ++H N+V G P ++ +YLS GSL LH+
Sbjct: 69 MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS 128
Query: 402 GEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461
G +QL + RL +A A+G+ YLH+ P I+HRD+KS N+L+D+ V DFGL+
Sbjct: 129 GAREQL-DERRRLSMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
Query: 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVK 521
+L + AGT ++APE L+ + EKSDVYSFGV+L EL T ++P
Sbjct: 187 RLKA-SXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA 245
Query: 522 RGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581
+ + VG K RLE I + V AI+E C P RPS ++
Sbjct: 246 QVVAAVG-----FKCKRLE--IPRNLN----PQVAAIIE---GCWTNEPWKRPSFATIMD 291
Query: 582 LLEQEVMSPCP 592
LL + S P
Sbjct: 292 LLRPLIKSAVP 302
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 157/311 (50%), Gaps = 32/311 (10%)
Query: 289 STKLITFHG-----DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRI 343
+T+ + F G DM P C+ L+ ++ +G+G FGTV+R + AVK +
Sbjct: 17 TTENLYFQGAMDGDDMDIPWCD-------LNIKEKIGAGSFGTVHRAEWHGSDV-AVKIL 68
Query: 344 DRSREGSDQV--FERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEH 401
+++V F RE+ I+ ++H N+V G P ++ +YLS GSL LH+
Sbjct: 69 MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS 128
Query: 402 GEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461
G +QL + RL +A A+G+ YLH+ P I+HR++KS N+L+D+ V DFGL+
Sbjct: 129 GAREQL-DERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186
Query: 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVK 521
+L + AGT ++APE L+ + EKSDVYSFGV+L EL T ++P
Sbjct: 187 RLKASTFLSSKSA-AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA 245
Query: 522 RGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581
+ + VG K RLE I + V AI+E C P RPS ++
Sbjct: 246 QVVAAVG-----FKCKRLE--IPRNLN----PQVAAIIE---GCWTNEPWKRPSFATIMD 291
Query: 582 LLEQEVMSPCP 592
LL + S P
Sbjct: 292 LLRPLIKSAVP 302
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 141/282 (50%), Gaps = 39/282 (13%)
Query: 316 EDVVGSGGFGTVYR-MVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNL 372
E+++G GGFG VYR + D R D + S + +E ++ +KH N++ L
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLH-EHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
RG C L+ ++ G L+ L + L+NW+ ++ ARG+ YLH +
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHDEA 125
Query: 432 CPKIIHRDIKSSNILLDENLEP--------HVSDFGLAKLLVDEEAHVTTVV--AGTFGY 481
IIHRD+KSSNIL+ + +E ++DFGLA+ E H TT + AG + +
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAW 180
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541
+APE +++ ++ SDV+S+GVLL EL+TG+ P RG++ + + + N+L
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF------RGIDGLA-VAYGVAMNKLAL 233
Query: 542 VIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
I C E ++ C + +P RPS +L L
Sbjct: 234 PIPSTCP-------EPFAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 41/286 (14%)
Query: 317 DVVGSGGFGTVYRMVMNDCGTFAV-KRIDRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+V+G G FG ++ + G V K + R E + + F +E++++ ++H N++ G
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
I +Y+ G+L + WS R+ A A G+AYLH I
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV-------------VAGTFGYL 482
IHRD+ S N L+ EN V+DFGLA+L+VDE+ + V G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKR----GLNVVGWMNTLLKENR 538
APE + EK DV+SFG++L E++ G+ DP ++ R GLNV G+++ N
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMDFGLNVRGFLDRYCPPN- 247
Query: 539 LEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
C + I RC D +P+ RPS ++ LE
Sbjct: 248 --------CP-------PSFFPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 133/283 (46%), Gaps = 21/283 (7%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L ++I +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 77 QLYAVVSEEPIYIVI-EYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE G
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 190
Query: 491 RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADA 550
R T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMPC 236
Query: 551 DMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C +P++RP+ + LE S P
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 135/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ I+H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLV 76
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 77 QL--YAVVSEEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 133 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 235
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C +P++RP+ + LE S P
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 133/283 (46%), Gaps = 21/283 (7%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L ++I +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 77 QLYAVVSEEPIYIVI-EYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE G
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 491 RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADA 550
R T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMPC 236
Query: 551 DMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C +P++RP+ + LE S P
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 67 QL--YAVVSEEPIXIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVER 122
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 123 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALY 179
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 180 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 225
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C P++RP+ + LE S P
Sbjct: 226 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 269
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 135/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 66 QL--YAVVSEEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVER 121
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 122 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 178
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 179 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 224
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C +P++RP+ + LE S P
Sbjct: 225 CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 268
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 371 NLRGYCRLPATKLLIY-DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + I +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 77 QL--YAVVSEEPIYIVCEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 133 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 235
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C +P++RP+ + LE S P
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 135/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 77 QL--YAVVSEEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 133 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 235
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C +P++RP+ + LE S P
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 243 QL--YAVVSEEPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 299 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 401
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C P++RP+ + LE S P
Sbjct: 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 70 QL--YAVVSEEPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVER 125
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 126 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 182
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 183 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 228
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C P++RP+ + LE S P
Sbjct: 229 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 272
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 243 QL--YAVVSEEPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 299 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 401
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C P++RP+ + LE S P
Sbjct: 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 135/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 68 QL--YAVVSEEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVER 123
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 124 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 180
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 181 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 226
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C +P++RP+ + LE S P
Sbjct: 227 CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 270
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 133/284 (46%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 371 NLRGYCRLPATKLLIY-DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + I +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 243 QL--YAVVSEEPIYIVGEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 299 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 401
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C P++RP+ + LE S P
Sbjct: 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 23/283 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 325
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 326 QL--YAVVSEEPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 382 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 438
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 439 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 484
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCP 592
E E++ ++ +C P++RP+ + LE S P
Sbjct: 485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLV 243
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 244 QL--YAVVSEEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGL +L+ D E + APE
Sbjct: 300 M---NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALY 356
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 357 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 402
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C +P++RP+ + LE S P
Sbjct: 403 CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 446
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S GSL DFL GE + L + +A A G+AY+
Sbjct: 77 QL--YAVVSEEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD+ ++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 133 M---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 235
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C +P++RP+ + LE S P
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S G L DFL GE + L + +A A G+AY+
Sbjct: 77 QL--YAVVSEEPIYIVMEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 133 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 235
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C +P++RP+ + LE S P
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y+S G L DFL GE + L + +A A G+AY+
Sbjct: 77 QL--YAVVSEEPIYIVTEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 133 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 189
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 190 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 235
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C +P++RP+ + LE S P
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQ 279
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y++ GSL DFL GE + L + ++ A G+AY+
Sbjct: 74 QL--YAVVSEEPIYIVTEYMNKGSLLDFLK--GETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 130 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALY 186
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 232
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C P++RP+ + LE S P
Sbjct: 233 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 276
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G G FG V+ N A+K + + S + F +E +++ ++H LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 371 NLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + + ++ +Y++ GSL DFL GE + L + ++ A G+AY+
Sbjct: 74 QL--YAVVSEEPIYIVTEYMNKGSLLDFLK--GETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+HRD++++NIL+ ENL V+DFGLA+L+ D E + APE
Sbjct: 130 M---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 186
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
GR T KSDV+SFG+LL EL T R P V R + L+ V
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRMP 232
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593
E E++ ++ +C P++RP+ + LE S P
Sbjct: 233 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 276
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 27/270 (10%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYC 376
+GSG FG V+ + A+K I REG S++ F E E++ + H LV L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
A L+++++ G L D+L + L L + L G+AYL C +I
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS 496
HRD+ + N L+ EN VSDFG+ + ++D++ +T + +PE R + KS
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 497 DVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
DV+SFGVL+ E+ + GK P + + VV ++T + + R A
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYEN---RSNSEVVEDISTGFR------LYKPRLASTH---- 230
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +I C P+DRP+ +++L+ L +
Sbjct: 231 --VYQIMNHCWKERPEDRPAFSRLLRQLAE 258
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 27/270 (10%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYC 376
+GSG FG V+ + A+K I REG S++ F E E++ + H LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
A L+++++ G L D+L + L L + L G+AYL C +I
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS 496
HRD+ + N L+ EN VSDFG+ + ++D++ +T + +PE R + KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 497 DVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
DV+SFGVL+ E+ + GK P + + VV ++T + + R A
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYEN---RSNSEVVEDISTGFR------LYKPRLASTH---- 232
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +I C P+DRP+ +++L+ L +
Sbjct: 233 --VYQIMNHCWKERPEDRPAFSRLLRQLAE 260
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 27/270 (10%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYC 376
+GSG FG V+ + A+K I REG S++ F E E++ + H LV L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
A L+++++ G L D+L + L L + L G+AYL C +I
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS 496
HRD+ + N L+ EN VSDFG+ + ++D++ +T + +PE R + KS
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 497 DVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
DV+SFGVL+ E+ + GK P + + VV ++T + + R A
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYEN---RSNSEVVEDISTGFR------LYKPRLASTH---- 235
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +I C P+DRP+ +++L+ L +
Sbjct: 236 --VYQIMNHCWRERPEDRPAFSRLLRQLAE 263
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 23/268 (8%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRL 378
+GSG FG V+ + A+K I D E E E++ + H LV L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE-EAEVMMKLSHPKLVQLYGVCLE 93
Query: 379 PATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHR 438
A L+++++ G L D+L + L L + L G+AYL C +IHR
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 439 DIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDV 498
D+ + N L+ EN VSDFG+ + ++D++ +T + +PE R + KSDV
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 499 YSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEA 557
+SFGVL+ E+ + GK P + + VV ++T + + R A
Sbjct: 208 WSFGVLMWEVFSEGKIPYEN---RSNSEVVEDISTGFR------LYKPRLASTH------ 252
Query: 558 ILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +I C P+DRP+ +++L+ L +
Sbjct: 253 VYQIMNHCWKERPEDRPAFSRLLRQLAE 280
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 130/270 (48%), Gaps = 27/270 (10%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYC 376
+GSG FG V+ + A+K I REG S++ F E E++ + H LV L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
A L+ +++ G L D+L + L L + L G+AYL C +I
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS 496
HRD+ + N L+ EN VSDFG+ + ++D++ +T + +PE R + KS
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 497 DVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
DV+SFGVL+ E+ + GK P + + VV ++T + + R A
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYEN---RSNSEVVEDISTGFR------LYKPRLASTH---- 233
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +I C P+DRP+ +++L+ L +
Sbjct: 234 --VYQIMNHCWRERPEDRPAFSRLLRQLAE 261
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 129/268 (48%), Gaps = 27/268 (10%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYC 376
+GSG FG V+ + A+K I REG S++ F E E++ + H LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
A L+++++ G L D+L + L L + L G+AYL +I
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEE---ASVI 125
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS 496
HRD+ + N L+ EN VSDFG+ + ++D++ +T + +PE R + KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 497 DVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
DV+SFGVL+ E+ + GK P + + VV ++T + + R A
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYEN---RSNSEVVEDISTGFR------LYKPRLASTH---- 232
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLL 583
+ +I C P+DRP+ +++L+ L
Sbjct: 233 --VYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 141/288 (48%), Gaps = 37/288 (12%)
Query: 313 LDEEDVVGSGGFGTVYR-MVMNDCGTFAVKR-IDRSREGSD------QVFERELEILGSI 364
++ E +G GGFG V++ ++ D A+K I EG Q F+RE+ I+ ++
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
H N+V L G P ++ +++ G D H + + WS +L++ L A G+
Sbjct: 81 NHPNIVKLYGLMHNPPR--MVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 425 AYLHHDCCPKIIHRDIKSSNILL---DENLE--PHVSDFGLAKLLVDEEAHVTTVVAGTF 479
Y+ + P I+HRD++S NI L DEN V+DFGL++ + H + + G F
Sbjct: 136 EYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNF 190
Query: 480 GYLAPEYL--QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537
++APE + + TEK+D YSF ++L ++TG+ P D + + ++N +++E
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD----EYSYGKIKFIN-MIREE 245
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
L I + C +E C +P RP + +++ L +
Sbjct: 246 GLRPTIPEDCPPRLRNVIEL-------CWSGDPKKRPHFSYIVKELSE 286
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 139/290 (47%), Gaps = 36/290 (12%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P S ++I++L G+G FG V+ N A+K + + S + F E
Sbjct: 5 EIPRESLQLIKRL---------GNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEE 54
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
+I+ +KH LV L Y + + ++ +Y++ GSL DFL + GEG+ L + +
Sbjct: 55 AQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKD-GEGRAL-KLPNLVDM 110
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+AY+ IHRD++S+NIL+ L ++DFGLA+L+ D E
Sbjct: 111 AAQVAAGMAYIERM---NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAK 167
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE GR T KSDV+SFG+LL ELVT R P G+N
Sbjct: 168 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYP-----GMN----------- 211
Query: 537 NR--LEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
NR LE V + ++ E+ C +P++RP+ + LE
Sbjct: 212 NREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 161
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 162 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 280 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 319
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 130
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 249 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 288
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 129
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 130 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 247
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 248 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 287
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 148
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 266
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 267 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 306
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 130
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 249 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 288
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGE---GQQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 148
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 266
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 267 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 306
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 128
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 129 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 246
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 247 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 286
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 136
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 137 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 254
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 255 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 294
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 130
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 249 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 288
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 135
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 136 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 253
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 254 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 293
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 134
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 135 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 252
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 253 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 292
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 133
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 251
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 252 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 291
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 137
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 138 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 255
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 256 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 295
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 141/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L +H E +LL +++++ +G+ YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 131
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHR++ + NIL++ + DFGL K+L ++ + G + APE
Sbjct: 132 --GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 249
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 250 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 289
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 139/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI +YL GSL D+L H E +LL +++++ +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI------CKGMEYL- 133
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 251
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 252 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 291
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 142/292 (48%), Gaps = 39/292 (13%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P S +++++L G+G FG V+ N+ AVK + + S Q F E
Sbjct: 9 EIPRESIKLVKRL---------GAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEE 58
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQ----QLLNWSAR 413
++ +++H LV L +I +Y++ GSL DFL G+ +L+++SA+
Sbjct: 59 ANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ 118
Query: 414 LKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT 473
+ A G+AY+ IHRD++++N+L+ E+L ++DFGLA+++ D E
Sbjct: 119 I------AEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 169
Query: 474 VVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNT 532
+ APE + G T KSDV+SFG+LL E+VT GK P G M
Sbjct: 170 GAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYP------GRTNADVMTA 223
Query: 533 LLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
L + R+ V + C D + +I C ++RP+ + + +L+
Sbjct: 224 LSQGYRMPRV--ENCPD-------ELYDIMKMCWKEKAEERPTFDYLQSVLD 266
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 133
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 193
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 194 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 239
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 278
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 133
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 193
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 194 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 239
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 278
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 134
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 194
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 240
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 279
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 127/269 (47%), Gaps = 25/269 (9%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 137
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 243
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLE 584
E + E+ C NP DRPS ++ Q E
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 127/269 (47%), Gaps = 25/269 (9%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 137
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 243
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLE 584
E + E+ C NP DRPS ++ Q E
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 127/269 (47%), Gaps = 25/269 (9%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 137
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 243
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLE 584
E + E+ C NP DRPS ++ Q E
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 124/267 (46%), Gaps = 21/267 (7%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G +G VY V T AVK + ++ F +E ++ IKH NLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIH 437
+I ++++ G+L D+L E +Q +N L +A + + YL IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 438 RDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSD 497
RD+ + N L+ EN V+DFGL++L+ + + APE L + + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 498 VYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEA 557
V++FGVLL E+ T P G+++ L K+ R+E + C E
Sbjct: 195 VWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP-------EK 240
Query: 558 ILEIAARCTDANPDDRPSMNQVLQLLE 584
+ E+ C NP DRPS ++ Q E
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 134
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 240
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 279
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 38/299 (12%)
Query: 301 YPSCEIIEKLEALDEEDVVGSGGFGTVYR-MVMNDCGT----FAVKRIDRSREGSDQV-F 354
+PSC + + V+G+G FG VY+ M+ G A+K + +V F
Sbjct: 42 HPSC--------VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDF 93
Query: 355 ERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL 414
E I+G H N++ L G ++I +Y+ G+LD FL E +L L
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML 153
Query: 415 KIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV 474
+ G A G+ YL + +HRD+ + NIL++ NL VSDFGL+++L D+ T
Sbjct: 154 R---GIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
Query: 475 VAGTFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMN 531
G + APE + + T SDV+SFG+++ E++T G+RP W
Sbjct: 208 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY-------------W-- 252
Query: 532 TLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
L ++ + D M+ AI ++ +C RP ++ +L++ + +P
Sbjct: 253 ELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 124/267 (46%), Gaps = 21/267 (7%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G +G VY V T AVK + ++ F +E ++ IKH NLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIH 437
+I ++++ G+L D+L E +Q +N L +A + + YL IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 438 RDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSD 497
RD+ + N L+ EN V+DFGL++L+ + + APE L + + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 498 VYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEA 557
V++FGVLL E+ T P G+++ L K+ R+E + C E
Sbjct: 195 VWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP-------EK 240
Query: 558 ILEIAARCTDANPDDRPSMNQVLQLLE 584
+ E+ C NP DRPS ++ Q E
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 145
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 205
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 206 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 251
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 252 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 290
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 127/269 (47%), Gaps = 25/269 (9%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 136
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 196
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 197 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 242
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLE 584
E + E+ C NP DRPS ++ Q E
Sbjct: 243 EKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 137
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 243
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 282
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 134
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 240
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 279
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 139/281 (49%), Gaps = 35/281 (12%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G+G FG V+ N AVK + + S + F E ++ +++H LV
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 73
Query: 371 NLRGYCRLPATKLLIY---DYLSMGSLDDFLH-EHGEGQ---QLLNWSARLKIALGSARG 423
L TK IY ++++ GSL DFL + G Q +L+++SA++ A G
Sbjct: 74 KLHAVV----TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEG 123
Query: 424 LAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLA 483
+A++ IHRD++++NIL+ +L ++DFGLA+++ D E + A
Sbjct: 124 MAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA 180
Query: 484 PEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543
PE + G T KSDV+SFG+LL+E+VT R P G++ + L + R+
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP-----GMSNPEVIRALERGYRMPR-- 233
Query: 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
+ C E + I RC P++RP+ + +L+
Sbjct: 234 PENCP-------EELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 140/288 (48%), Gaps = 37/288 (12%)
Query: 313 LDEEDVVGSGGFGTVYR-MVMNDCGTFAVKR-IDRSREGSD------QVFERELEILGSI 364
++ E +G GGFG V++ ++ D A+K I EG Q F+RE+ I+ ++
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
H N+V L G P ++ +++ G D H + + WS +L++ L A G+
Sbjct: 81 NHPNIVKLYGLMHNPPR--MVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 425 AYLHHDCCPKIIHRDIKSSNILL---DENLE--PHVSDFGLAKLLVDEEAHVTTVVAGTF 479
Y+ + P I+HRD++S NI L DEN V+DFG ++ + H + + G F
Sbjct: 136 EYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNF 190
Query: 480 GYLAPEYL--QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537
++APE + + TEK+D YSF ++L ++TG+ P D + + ++N +++E
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD----EYSYGKIKFIN-MIREE 245
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
L I + C +E C +P RP + +++ L +
Sbjct: 246 GLRPTIPEDCPPRLRNVIEL-------CWSGDPKKRPHFSYIVKELSE 286
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 140/288 (48%), Gaps = 37/288 (12%)
Query: 313 LDEEDVVGSGGFGTVYR-MVMNDCGTFAVKR-IDRSREGSD------QVFERELEILGSI 364
++ E +G GGFG V++ ++ D A+K I EG Q F+RE+ I+ ++
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
H N+V L G P ++ +++ G D H + + WS +L++ L A G+
Sbjct: 81 NHPNIVKLYGLMHNPPR--MVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 425 AYLHHDCCPKIIHRDIKSSNILL---DENLE--PHVSDFGLAKLLVDEEAHVTTVVAGTF 479
Y+ + P I+HRD++S NI L DEN V+DF L++ + H + + G F
Sbjct: 136 EYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNF 190
Query: 480 GYLAPEYL--QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537
++APE + + TEK+D YSF ++L ++TG+ P D + + ++N +++E
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD----EYSYGKIKFIN-MIREE 245
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
L I + C +E C +P RP + +++ L +
Sbjct: 246 GLRPTIPEDCPPRLRNVIEL-------CWSGDPKKRPHFSYIVKELSE 286
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 139/281 (49%), Gaps = 35/281 (12%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G+G FG V+ N AVK + + S + F E ++ +++H LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 371 NLRGYCRLPATKLLIY---DYLSMGSLDDFLH-EHGEGQ---QLLNWSARLKIALGSARG 423
L TK IY ++++ GSL DFL + G Q +L+++SA++ A G
Sbjct: 247 KLHAVV----TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEG 296
Query: 424 LAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLA 483
+A++ IHRD++++NIL+ +L ++DFGLA+++ D E + A
Sbjct: 297 MAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA 353
Query: 484 PEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543
PE + G T KSDV+SFG+LL+E+VT R P G++ + L + R+
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP-----GMSNPEVIRALERGYRMPR-- 406
Query: 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
+ C E + I RC P++RP+ + +L+
Sbjct: 407 PENCP-------EELYNIMMRCWKNRPEERPTFEYIQSVLD 440
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 145/292 (49%), Gaps = 39/292 (13%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P S ++++KL G+G FG V+ N+ AVK + + S Q F E
Sbjct: 8 EIPRESIKLVKKL---------GAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEE 57
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQ----QLLNWSAR 413
++ +++H LV L +I ++++ GSL DFL G+ +L+++SA+
Sbjct: 58 ANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ 117
Query: 414 LKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT 473
+ A G+AY+ IHRD++++N+L+ E+L ++DFGLA+++ D E
Sbjct: 118 I------AEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 168
Query: 474 VVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNT 532
+ APE + G T KS+V+SFG+LL E+VT GK P + +V+ ++
Sbjct: 169 GAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPG---RTNADVMSALSQ 225
Query: 533 LLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
+ R+E+ C D + +I C ++RP+ + + +L+
Sbjct: 226 GYRMPRMEN-----CPD-------ELYDIMKMCWKEKAEERPTFDYLQSVLD 265
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 33/283 (11%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G FG VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q ++ L +A + + YL
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 496 SDVYSFGVLLLELVT-GKRP---TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
SDV++FGVLL E+ T G P DP+ V L K+ R+E + C
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDPSQV---------YELLEKDYRMER--PEGCP--- 236
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 237 ----EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q ++ L +A + + YL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NF 132
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 238
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 126/277 (45%), Gaps = 21/277 (7%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G +G VY V T AVK + ++ F +E ++ IKH NLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIH 437
+I ++++ G+L D+L E +Q ++ L +A + + YL IH
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 438 RDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSD 497
RD+ + N L+ EN V+DFGL++L+ + + APE L + + KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 498 VYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEA 557
V++FGVLL E+ T P G+++ L K+ R+E + C E
Sbjct: 195 VWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP-------EK 240
Query: 558 ILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
+ E+ C NP DRPS ++ Q E SD
Sbjct: 241 VYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 35/278 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 20 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH + + IA +ARG+ YLH II
Sbjct: 78 TKPQLAI-VTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLH---AKSII 130
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+ + DFGLA + +H ++G+ ++APE ++ S
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ +++ + D+
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIEMVGRGSLSPDL 235
Query: 553 ETVEA-----ILEIAARCTDANPDDRPSMNQVLQLLEQ 585
V + + + A C D+RPS ++L +E+
Sbjct: 236 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 273
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q ++ L +A + + YL
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NF 132
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 238
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 149/316 (47%), Gaps = 40/316 (12%)
Query: 285 DQETSTKLI--TFHGDMPYPSCEIIEKLE---------ALDEEDVVGSGGFGTVYR--MV 331
D + S+ L+ T H D+ + E+++ ++ + +V+G G FG VY ++
Sbjct: 11 DSDISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLL 70
Query: 332 MNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYC-RLPATKLLIYD 387
ND AVK ++R + G F E I+ H N+++L G C R + L++
Sbjct: 71 DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 130
Query: 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL 447
Y+ G L +F+ + + + L A+G+ YL K +HRD+ + N +L
Sbjct: 131 YMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---ASKKFVHRDLAARNCML 184
Query: 448 DENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVL 504
DE V+DFGLA+ + D+E H T ++A E LQ+ + T KSDV+SFGVL
Sbjct: 185 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 244
Query: 505 LLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAAR 564
L EL+T P P +N LL+ RL + + C D + E+ +
Sbjct: 245 LWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYCPD-------PLYEVMLK 290
Query: 565 CTDANPDDRPSMNQVL 580
C + RPS ++++
Sbjct: 291 CWHPKAEMRPSFSELV 306
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 127/276 (46%), Gaps = 32/276 (11%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNL 372
++ E+VVG G FG V + A+K+I+ E + F EL L + H N+V L
Sbjct: 10 IEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKL 66
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
G C P L+ +Y GSL + LH E + + L ++G+AYLH
Sbjct: 67 YGACLNPVC--LVMEYAEGGSLYNVLH-GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 433 PKIIHRDIKSSNILL-DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+IHRD+K N+LL + DFG A D + H+T G+ ++APE +
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNN-KGSAAWMAPEVFEGSN 179
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTD----PTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
+EK DV+S+G++L E++T ++P D P F G L+K
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIK------------ 227
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
+ I + RC +P RPSM ++++++
Sbjct: 228 -----NLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ YL
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 168
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 281
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 282 PD-------PLYEVMLKCWHPKAEMRPSFSELV 307
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q ++ L +A + + YL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NF 132
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 193 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 238
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 127/276 (46%), Gaps = 32/276 (11%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNL 372
++ E+VVG G FG V + A+K+I+ E + F EL L + H N+V L
Sbjct: 11 IEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKL 67
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
G C P L+ +Y GSL + LH E + + L ++G+AYLH
Sbjct: 68 YGACLNPVC--LVMEYAEGGSLYNVLH-GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 433 PKIIHRDIKSSNILL-DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+IHRD+K N+LL + DFG A D + H+T G+ ++APE +
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNN-KGSAAWMAPEVFEGSN 180
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTD----PTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
+EK DV+S+G++L E++T ++P D P F G L+K
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIK------------ 228
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
+ I + RC +P RPSM ++++++
Sbjct: 229 -----NLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 149
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 262
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 263 PD-------PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ YL
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 146
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 259
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 260 PD-------PLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ YL
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 141
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 254
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 255 PD-------PLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 33/283 (11%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q ++ L +A + + YL
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 496 SDVYSFGVLLLELVT-GKRP---TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
SDV++FGVLL E+ T G P DP+ V L K+ R+E + C
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDPSQV---------YELLEKDYRMER--PEGCP--- 236
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 237 ----EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 148
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 261
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 262 PD-------PLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q ++ L +A + + YL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NF 137
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 243
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 282
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ YL
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 147
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 260
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 261 PD-------PLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 140/288 (48%), Gaps = 38/288 (13%)
Query: 319 VGSGGFGTV----YRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S E + FERE+EIL S++H N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
G C + LI ++L GSL ++L +H E +LL +++++ +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI------CKGMEYL- 133
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT--FGYLAPEY 486
+ IHRD+ + NIL++ + DFGL K+L ++ G + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPT-FV------KRGLNVVGWMNTLLKEN 537
L + + SDV+SFGV+L EL T K + P F+ K+G +V + LLK N
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 251
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
D C D I I C + N + RPS + ++Q
Sbjct: 252 GRLPRPDG-CPD-------EIYMIMTECWNNNVNQRPSFRDLALRVDQ 291
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 148
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 261
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 262 PD-------PLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ YL
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 144
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 257
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 258 PD-------PLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL--- 149
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 262
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 263 PD-------PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 336
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHR++ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 396
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 397 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 442
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 443 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 481
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q +N L +A + + YL
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NF 378
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHR++ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 438
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 439 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 484
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 485 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 523
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 35/278 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH + + IA +ARG+ YLH II
Sbjct: 90 TAPQLAI-VTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+ + DFGLA +H ++G+ ++APE ++ S
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ +++ + D+
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIEMVGRGSLSPDL 247
Query: 553 ETVEA-----ILEIAARCTDANPDDRPSMNQVLQLLEQ 585
V + + + A C D+RPS ++L +E+
Sbjct: 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 33/283 (11%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q ++ L +A + + YL
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRD+ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 496 SDVYSFGVLLLELVT-GKRP---TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
SDV++FGVLL E+ T G P DP+ V L K+ R+E + C
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDPSQV---------YELLEKDYRMER--PEGCP--- 236
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 237 ----EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 150
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ ++D+E H T ++A E L
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 263
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 264 PD-------PLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 35/278 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH + + IA +ARG+ YLH II
Sbjct: 90 TKPQLAI-VTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+ + DFGLA +H ++G+ ++APE ++ S
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ +++ + D+
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIEMVGRGSLSPDL 247
Query: 553 ETVEA-----ILEIAARCTDANPDDRPSMNQVLQLLEQ 585
V + + + A C D+RPS ++L +E+
Sbjct: 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ +L
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 154
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 267
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 268 PD-------PLYEVMLKCWHPKAEMRPSFSELV 293
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 10 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 59
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 60 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 115
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 116 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 172
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 173 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 227
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 228 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ +L
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 208
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 321
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 322 PD-------PLYEVMLKCWHPKAEMRPSFSELV 347
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ +L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 147
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYP-----DVNTFDITVYLLQGRRL--LQPEYC 260
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 261 PD-------PLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 149
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 262
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 263 PD-------PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 150
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 263
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 264 PD-------PLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 11 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 60
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 61 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 116
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 117 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 173
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 174 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 228
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 229 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTF--AVKRIDRSRE-GSDQVFERELEILGSIKHINLVN 371
+V+G G FG VY ++ ND AVK ++R + G F E I+ H N+++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 372 LRGYC-RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G C R + L++ Y+ G L +F+ + + + L A+G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL--- 149
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE---AHVTTVVAGTFGYLAPEYL 487
K +HRD+ + N +LDE V+DFGLA+ + D+E H T ++A E L
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
Q+ + T KSDV+SFGVLL EL+T P P +N LL+ RL + + C
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPD-----VNTFDITVYLLQGRRL--LQPEYC 262
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
D + E+ +C + RPS ++++
Sbjct: 263 PD-------PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 9 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 58
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 59 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 114
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 115 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 171
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 226
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 227 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 15 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 64
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 65 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 120
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 121 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 177
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 232
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 233 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 18 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 67
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 68 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 123
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 124 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 180
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 181 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 235
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 236 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 9 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 58
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 59 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 114
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 115 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 171
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 226
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 227 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 17 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 66
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 67 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 122
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 123 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 179
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 180 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 234
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 235 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGY 375
+G G +G VY V T AVK + +E + +V F +E ++ IKH NLV L G
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTL---KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
C +I ++++ G+L D+L E +Q ++ L +A + + YL
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NF 339
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHR++ + N L+ EN V+DFGL++L+ + + APE L + + K
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 399
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETV 555
SDV++FGVLL E+ T P G+++ L K+ R+E + C
Sbjct: 400 SDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRMER--PEGCP------- 445
Query: 556 EAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSD 594
E + E+ C NP DRPS ++ Q E SD
Sbjct: 446 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 484
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 19 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 68
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 69 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 124
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 125 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 181
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 182 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 236
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 237 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 9 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 58
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 59 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 114
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 115 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 171
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 226
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 227 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 15 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 64
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 65 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 120
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 121 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 177
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 232
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 233 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 14 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 63
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 64 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 119
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 120 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 176
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 177 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 231
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 232 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH +++ + IA +A+G+ YLH II
Sbjct: 74 TAPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLH---AKSII 126
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+L + DFGLA + +H ++G+ ++APE ++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ ++ + D+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIFMVGRGYLSPDL 231
Query: 553 ETV-----EAILEIAARCTDANPDDRPSMNQVLQLLE 584
V +A+ + A C D+RP Q+L +E
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 4 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 53
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 54 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 109
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 110 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 166
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 167 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 221
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 222 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 18 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH +++ + IA +A+G+ YLH II
Sbjct: 76 TKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLH---AKSII 128
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+L + DFGLA + +H ++G+ ++APE ++
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ ++ + D+
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIFMVGRGYLSPDL 233
Query: 553 ETV-----EAILEIAARCTDANPDDRPSMNQVLQLLE 584
V +A+ + A C D+RP Q+L +E
Sbjct: 234 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH +++ + IA +A+G+ YLH II
Sbjct: 74 TKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLH---AKSII 126
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+L + DFGLA + +H ++G+ ++APE ++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ ++ + D+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIFMVGRGYLSPDL 231
Query: 553 ETV-----EAILEIAARCTDANPDDRPSMNQVLQLLE 584
V +A+ + A C D+RP Q+L +E
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 21 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH +++ + IA +A+G+ YLH II
Sbjct: 79 TKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLH---AKSII 131
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+L + DFGLA + +H ++G+ ++APE ++
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ ++ + D+
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIFMVGRGYLSPDL 236
Query: 553 ETV-----EAILEIAARCTDANPDDRPSMNQVLQLLE 584
V +A+ + A C D+RP Q+L +E
Sbjct: 237 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 21 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH +++ + IA +A+G+ YLH II
Sbjct: 79 TKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLH---AKSII 131
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+L + DFGLA + +H ++G+ ++APE ++
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ ++ + D+
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIFMVGRGYLSPDL 236
Query: 553 ETV-----EAILEIAARCTDANPDDRPSMNQVLQLLE 584
V +A+ + A C D+RP Q+L +E
Sbjct: 237 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 142/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ +Y+ GSLD FL +H ++ L+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGLA++L D+ T G
Sbjct: 155 -GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGG 210
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 255
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRL 378
+GSG FG V AVK I D+ F+ E + + + H LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ-EAQTMMKLSHPKLVKFYGVCSK 74
Query: 379 PATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHR 438
++ +Y+S G L ++L HG+G L S L++ G+A+L + IHR
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKG---LEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 439 DIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDV 498
D+ + N L+D +L VSDFG+ + ++D++ + + APE + + KSDV
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 499 YSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEA 557
++FG+L+ E+ + GK P D + V + L + + D
Sbjct: 189 WAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD---------------T 233
Query: 558 ILEIAARCTDANPDDRPSMNQVLQLLE 584
I +I C P+ RP+ Q+L +E
Sbjct: 234 IYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ +Y+ GSLD FL +H ++ L+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGL+++L D+ T G
Sbjct: 155 -GIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 255
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 43 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH +++ + IA +A+G+ YLH II
Sbjct: 101 TKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSII 153
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+L + DFGLA + +H ++G+ ++APE ++
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ ++ + D+
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIFMVGRGYLSPDL 258
Query: 553 ETV-----EAILEIAARCTDANPDDRPSMNQVLQLLE 584
V +A+ + A C D+RP Q+L +E
Sbjct: 259 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH +++ + IA +A+G+ YLH II
Sbjct: 102 TKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSII 154
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+L + DFGLA + +H ++G+ ++APE ++
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ ++ + D+
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIFMVGRGYLSPDL 259
Query: 553 ETV-----EAILEIAARCTDANPDDRPSMNQVLQLLE 584
V +A+ + A C D+RP Q+L +E
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 8 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ +Y+ GSLD FL +H ++ L+
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 125
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGL+++L D+ T G
Sbjct: 126 -GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 226
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 227 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 282
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 25 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ +Y+ GSLD FL +H ++ L+
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 142
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGL+++L D+ T G
Sbjct: 143 -GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 243
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 244 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 299
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G FG V+ N AVK + + D F E
Sbjct: 5 EVPRETLKLVERL---------GAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 54
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 55 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 110
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHR+++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 111 AAQIAEGMAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 167
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 168 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 222
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 223 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ +Y+ GSLD FL +H ++ L+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGL+++L D+ T G
Sbjct: 155 -GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 255
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ +Y+ GSLD FL +H ++ L+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGL+++L D+ T G
Sbjct: 155 -GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 255
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ +Y+ GSLD FL +H ++ L+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGL+++L D+ T G
Sbjct: 155 -GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 255
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ +Y+ GSLD FL +H ++ L+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGL+++L D+ T G
Sbjct: 155 -GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 255
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 35 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 94
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ +Y+ GSLD FL +H ++ L+
Sbjct: 95 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 152
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGL+++L D+ T G
Sbjct: 153 -GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 208
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 209 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 253
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 254 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 309
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 35/277 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH +++ + IA +A+G+ YLH II
Sbjct: 74 TKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLH---AKSII 126
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+L + DFGLA +H ++G+ ++APE ++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ ++ + D+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIFMVGRGYLSPDL 231
Query: 553 ETV-----EAILEIAARCTDANPDDRPSMNQVLQLLE 584
V +A+ + A C D+RP Q+L +E
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 141/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ +Y+ GSLD FL +H ++ L+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGL ++L D+ T G
Sbjct: 155 -GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGG 210
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 255
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 35/277 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 36 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH +++ + IA +A+G+ YLH II
Sbjct: 94 TKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSII 146
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+L + DFGLA +H ++G+ ++APE ++
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ ++ + D+
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIFMVGRGYLSPDL 251
Query: 553 ETV-----EAILEIAARCTDANPDDRPSMNQVLQLLE 584
V +A+ + A C D+RP Q+L +E
Sbjct: 252 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 288
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 298 DMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERE 357
++P + +++E+L G+G G V+ N AVK + + D F E
Sbjct: 9 EVPRETLKLVERL---------GAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE 58
Query: 358 LEILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
++ ++H LV L Y + + +I +Y+ GSL DFL + +N L +
Sbjct: 59 ANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDM 114
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
A A G+A++ IHRD++++NIL+ + L ++DFGLA+L+ D E
Sbjct: 115 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAK 171
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
+ APE + G T KSDV+SFG+LL E+VT R P G+ + L +
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-----GMTNPEVIQNLERG 226
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R+ V C E + ++ C P+DRP+ + + +LE
Sbjct: 227 YRM--VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 35/277 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNLRGYC 376
+GSG FGTVY+ + G AVK ++ + Q+ F+ E+ +L +H+N++ GY
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
P + + + SL LH +++ + IA +A+G+ YLH II
Sbjct: 102 TKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSII 154
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRA 492
HRD+KS+NI L E+L + DFGLA +H ++G+ ++APE ++
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
+ +SDVY+FG++L EL+TG+ P + + +++ ++ + D+
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIFMVGRGYLSPDL 259
Query: 553 ETV-----EAILEIAARCTDANPDDRPSMNQVLQLLE 584
V +A+ + A C D+RP Q+L +E
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 21/235 (8%)
Query: 293 ITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDRSR 347
+T G P + I K L V+GSG FGTVY+ + G A+K ++ +
Sbjct: 20 LTPSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 79
Query: 348 EGSDQV-FERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG-- 404
V F E I+ S+ H +LV L G C P +L + + G L +++HEH +
Sbjct: 80 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIG 138
Query: 405 -QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463
Q LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLA+L
Sbjct: 139 SQLLLNWCVQI------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 189
Query: 464 LV-DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
L DE+ + ++A E + + T +SDV+S+GV + EL+T G +P D
Sbjct: 190 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 41/293 (13%)
Query: 319 VGSGGFG-----TVYRMVMNDCG-TFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G+G FG T Y ++ +D T AVK + S ++ + EL++L + H+N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL--------------KI 416
NL G C + L+I +Y G L +FL + S +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
+ A+G+A+L C IHRD+ + NILL + DFGLA+ + ++ +V A
Sbjct: 174 SYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 477 G-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE + + T +SDV+S+G+ L EL + G P G+ V ++
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP------GMPVDSKFYKMI 284
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
KE ++ A A+M +I C DA+P RP+ Q++QL+E+++
Sbjct: 285 KEGF--RMLSPEHAPAEM------YDIMKTCWDADPLKRPTFKQIVQLIEKQI 329
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 41/293 (13%)
Query: 319 VGSGGFG-----TVYRMVMNDCG-TFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G+G FG T Y ++ +D T AVK + S ++ + EL++L + H+N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL--------------KI 416
NL G C + L+I +Y G L +FL + S +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
+ A+G+A+L C IHRD+ + NILL + DFGLA+ + ++ +V A
Sbjct: 151 SYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 477 G-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE + + T +SDV+S+G+ L EL + G P G+ V ++
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP------GMPVDSKFYKMI 261
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
KE ++ A A+M +I C DA+P RP+ Q++QL+E+++
Sbjct: 262 KEGF--RMLSPEHAPAEM------YDIMKTCWDADPLKRPTFKQIVQLIEKQI 306
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 41/293 (13%)
Query: 319 VGSGGFG-----TVYRMVMNDCG-TFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G+G FG T Y ++ +D T AVK + S ++ + EL++L + H+N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL--------------KI 416
NL G C + L+I +Y G L +FL + S +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
+ A+G+A+L C IHRD+ + NILL + DFGLA+ + ++ +V A
Sbjct: 169 SYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 477 G-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE + + T +SDV+S+G+ L EL + G P G+ V ++
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP------GMPVDSKFYKMI 279
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
KE ++ A A+M +I C DA+P RP+ Q++QL+E+++
Sbjct: 280 KEGF--RMLSPEHAPAEM------YDIMKTCWDADPLKRPTFKQIVQLIEKQI 324
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 21/210 (10%)
Query: 318 VVGSGGFGTVYRMVMNDCG-----TFAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
V+GSG FGTVY+ + G A+K ++ + V F E I+ S+ H +LV
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLH 428
L G C P +L + + G L +++HEH + Q LLNW ++ A+G+ YL
Sbjct: 82 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 134
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV-DEEAHVTTVVAGTFGYLAPEYL 487
+++HRD+ + N+L+ ++DFGLA+LL DE+ + ++A E +
Sbjct: 135 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 488 QSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
+ T +SDV+S+GV + EL+T G +P D
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 41/293 (13%)
Query: 319 VGSGGFG-----TVYRMVMNDCG-TFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G+G FG T Y ++ +D T AVK + S ++ + EL++L + H+N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL--------------KI 416
NL G C + L+I +Y G L +FL + S +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
+ A+G+A+L C IHRD+ + NILL + DFGLA+ + ++ +V A
Sbjct: 174 SYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 477 G-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE + + T +SDV+S+G+ L EL + G P G+ V ++
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP------GMPVDSKFYKMI 284
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
KE ++ A A+M +I C DA+P RP+ Q++QL+E+++
Sbjct: 285 KEGF--RMLSPEHAPAEM------YDIMKTCWDADPLKRPTFKQIVQLIEKQI 329
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 41/293 (13%)
Query: 319 VGSGGFG-----TVYRMVMNDCG-TFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G+G FG T Y ++ +D T AVK + S ++ + EL++L + H+N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL--------------KI 416
NL G C + L+I +Y G L +FL + S +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
+ A+G+A+L C IHRD+ + NILL + DFGLA+ + ++ +V A
Sbjct: 167 SYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 477 G-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE + + T +SDV+S+G+ L EL + G P G+ V ++
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP------GMPVDSKFYKMI 277
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
KE ++ A A+M +I C DA+P RP+ Q++QL+E+++
Sbjct: 278 KEGF--RMLSPEHAPAEM------YDIMKTCWDADPLKRPTFKQIVQLIEKQI 322
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 37/287 (12%)
Query: 316 EDVVGSGGFGTV---------YRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKH 366
E V+G+G FG V R V T V ++ R F E I+G H
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD----FLCEASIMGQFDH 103
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N+V+L G +++ +++ G+LD FL +H ++ L+ G A G+ Y
Sbjct: 104 PNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR---GIAAGMRY 160
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG--YLAP 484
L +HRD+ + NIL++ NL VSDFGL++++ D+ V T G + AP
Sbjct: 161 LAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAP 217
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543
E +Q + T SDV+S+G+++ E+++ G+RP W + ++ ++ +
Sbjct: 218 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-------------W--DMSNQDVIKAIE 262
Query: 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
+ A M+ + ++ C +RP Q++ +L++ + +P
Sbjct: 263 EGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMIRNP 309
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 138/285 (48%), Gaps = 31/285 (10%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGT----FAVKRIDRS-REGSDQVFERELEILGSIKHINLV 370
E V+G+G FG V + G A+K + E + F E I+G H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+L G ++I +++ GSLD FL ++ ++ L+ G A G+ YL
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL--- 151
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE--EAHVTTVVAGTFG--YLAPEY 486
+HRD+ + NIL++ NL VSDFGL++ L D+ + T+ + G + APE
Sbjct: 152 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 487 LQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545
+Q + T SDV+S+G+++ E+++ G+R P + +V+ N + ++ RL
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGER---PYWDMTNQDVI---NAIEQDYRLP----- 260
Query: 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
M+ A+ ++ C + + RP Q++ L++ + +P
Sbjct: 261 ----PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 301
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 141/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ + + GSLD FL +H ++ L+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGL+++L D+ T G
Sbjct: 155 -GIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 255
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 120/267 (44%), Gaps = 21/267 (7%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G +G VY V T AVK + ++ F +E ++ IKH NLV L G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIH 437
L ++ +Y+ G+L D+L E ++ + L +A + + YL IH
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLREC--NREEVTAVVLLYMATQISSAMEYLEKK---NFIH 153
Query: 438 RDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSD 497
RD+ + N L+ EN V+DFGL++L+ + + APE L + KSD
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSD 213
Query: 498 VYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEA 557
V++FGVLL E+ T P G+++ + L K R+E + C
Sbjct: 214 VWAFGVLLWEIATYGMSPYP-----GIDLSQVYDLLEKGYRMEQ--PEGCPP-------K 259
Query: 558 ILEIAARCTDANPDDRPSMNQVLQLLE 584
+ E+ C +P DRPS + Q E
Sbjct: 260 VYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 141/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 8 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ + + GSLD FL +H ++ L+
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-- 125
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGL+++L D+ T G
Sbjct: 126 -GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 226
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 227 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 282
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 141/296 (47%), Gaps = 31/296 (10%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERE 357
E ++L+A + + VVG+G FG V ++ + A+K + E + F E
Sbjct: 37 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 358 LEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
I+G H N++ L G +++ + + GSLD FL +H ++ L+
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-- 154
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
G A G+ YL +HRD+ + NIL++ NL VSDFGL+++L D+ T G
Sbjct: 155 -GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 478 TFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
+ +PE + + T SDV+S+G++L E+++ G+RP W +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W--EMS 255
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
++ ++ V + M+ A+ ++ C + ++RP Q++ +L++ + +P
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 49/283 (17%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLV 370
E+L E +G+G FG V+ N AVK + + S + F E ++ +++H LV
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 240
Query: 371 NLRGYCRLPATKLLIY---DYLSMGSLDDFLH-EHGEGQ---QLLNWSARLKIALGSARG 423
L TK IY ++++ GSL DFL + G Q +L+++SA++ A G
Sbjct: 241 KLHAVV----TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEG 290
Query: 424 LAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GY 481
+A++ IHRD++++NIL+ +L ++DFGLA+ V F +
Sbjct: 291 MAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLAR------------VGAKFPIKW 335
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541
APE + G T KSDV+SFG+LL+E+VT R P G++ + L + R+
Sbjct: 336 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP-----GMSNPEVIRALERGYRMPR 390
Query: 542 VIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
+ C E + I RC P++RP+ + +L+
Sbjct: 391 --PENCP-------EELYNIMMRCWKNRPEERPTFEYIQSVLD 424
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 141/301 (46%), Gaps = 39/301 (12%)
Query: 305 EIIEKLEA--LDEEDVVGSGGFGTV---------YRMVMNDCGTFAVKRIDRSREGSDQV 353
E +++EA + E V+G+G FG V R + T V ++ R
Sbjct: 14 EFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRD---- 69
Query: 354 FERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSAR 413
F E I+G H N+++L G +++ +Y+ GSLD FL ++ ++
Sbjct: 70 FLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGM 129
Query: 414 LKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT 473
L+ G + G+ YL +HRD+ + NIL++ NL VSDFGL+++L D+ T
Sbjct: 130 LR---GISAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 474 VVAGTFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWM 530
G + APE + + T SDV+S+G+++ E+V+ G+RP W
Sbjct: 184 TRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY-------------W- 229
Query: 531 NTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
+ ++ ++ V + + M+ A+ ++ C + RP ++++ +L++ + +P
Sbjct: 230 -EMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRNP 288
Query: 591 C 591
Sbjct: 289 A 289
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 23/209 (11%)
Query: 318 VVGSGGFGTVYRMVMNDCG-----TFAVKRI-DRSREGSDQVFERELEILGSIKHINLVN 371
V+GSG FGTV++ V G +K I D+S S Q + +GS+ H ++V
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 372 LRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYL 427
L G C P + L L+ YL +GSL D + +H Q LLNW ++ A+G+ YL
Sbjct: 98 LLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 149
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT-FGYLAPEY 486
++HR++ + N+LL + V+DFG+A LL ++ + A T ++A E
Sbjct: 150 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 487 LQSGRATEKSDVYSFGVLLLELVT-GKRP 514
+ G+ T +SDV+S+GV + EL+T G P
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 23/209 (11%)
Query: 318 VVGSGGFGTVYRMVMNDCG-----TFAVKRI-DRSREGSDQVFERELEILGSIKHINLVN 371
V+GSG FGTV++ V G +K I D+S S Q + +GS+ H ++V
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 372 LRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYL 427
L G C P + L L+ YL +GSL D + +H Q LLNW ++ A+G+ YL
Sbjct: 80 LLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 131
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT-FGYLAPEY 486
++HR++ + N+LL + V+DFG+A LL ++ + A T ++A E
Sbjct: 132 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 487 LQSGRATEKSDVYSFGVLLLELVT-GKRP 514
+ G+ T +SDV+S+GV + EL+T G P
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 33/276 (11%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+GSG FGTVY+ + D +K +D + E Q F E+ +L +H+N++ GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPE-QFQAFRNEVAVLRKTRHVNILLFMGYM- 101
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIH 437
++ + SL LH Q+ + IA +A+G+ YLH IIH
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQ---LIDIARQTAQGMDYLH---AKNIIH 155
Query: 438 RDIKSSNILLDENLEPHVSDFGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQ---SGRAT 493
RD+KS+NI L E L + DFGLA + + G+ ++APE ++ + +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 494 EKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADME 553
+SDVYS+G++L EL+TG+ P + + +++ ++ + A D+
Sbjct: 216 FQSDVYSYGIVLYELMTGELP---------------YSHINNRDQIIFMVGRGYASPDLS 260
Query: 554 TV-----EAILEIAARCTDANPDDRPSMNQVLQLLE 584
+ +A+ + A C ++RP Q+L +E
Sbjct: 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 137/285 (48%), Gaps = 31/285 (10%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGT----FAVKRIDRS-REGSDQVFERELEILGSIKHINLV 370
E V+G+G FG V + G A+K + E + F E I+G H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+L G ++I +++ GSLD FL ++ ++ L+ G A G+ YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLAD- 127
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE--EAHVTTVVAGTFG--YLAPEY 486
+HR + + NIL++ NL VSDFGL++ L D+ + T+ + G + APE
Sbjct: 128 --MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 487 LQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545
+Q + T SDV+S+G+++ E+++ G+R P + +V+ N + ++ RL
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGER---PYWDMTNQDVI---NAIEQDYRLP----- 234
Query: 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
M+ A+ ++ C + + RP Q++ L++ + +P
Sbjct: 235 ----PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 275
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 32/270 (11%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLRGY 375
+G G FG + + G + +K I+ SR S + E RE+ +L ++KH N+V R
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHG----EGQQLLNWSARLKIALGSARGLAYLHHDC 431
+ ++ DY G L ++ + Q+L+W ++ +AL HD
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV-------HD- 143
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
KI+HRDIKS NI L ++ + DFG+A++L + + GT YL+PE ++
Sbjct: 144 -RKILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACIGTPYYLSPEICENKP 201
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
KSD+++ G +L EL T +K N +LK +I
Sbjct: 202 YNNKSDIWALGCVLYELCT---------LKHAFEAGSMKNLVLK------IISGSFPPVS 246
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
+ + + ++ NP DRPS+N +L+
Sbjct: 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 21/204 (10%)
Query: 319 VGSGGFGTV----YRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S + F+RE++IL ++ +V R
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHG---EGQQLLNWSARLKIALGSARGLAYLH 428
G P + L+ +YL G L DFL H + +LL +S+++ +G+ YL
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYLG 131
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGT-FGYLAPEY 486
C +HRD+ + NIL++ ++DFGLAKLL +D++ +V + + APE
Sbjct: 132 SRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 487 LQSGRATEKSDVYSFGVLLLELVT 510
L + +SDV+SFGV+L EL T
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 21/204 (10%)
Query: 319 VGSGGFGTV----YRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S + F+RE++IL ++ +V R
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHG---EGQQLLNWSARLKIALGSARGLAYLH 428
G P + L+ +YL G L DFL H + +LL +S+++ +G+ YL
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYLG 132
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGT-FGYLAPEY 486
C +HRD+ + NIL++ ++DFGLAKLL +D++ +V + + APE
Sbjct: 133 SRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 487 LQSGRATEKSDVYSFGVLLLELVT 510
L + +SDV+SFGV+L EL T
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 21/204 (10%)
Query: 319 VGSGGFGTV----YRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S + F+RE++IL ++ +V R
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHG---EGQQLLNWSARLKIALGSARGLAYLH 428
G P + L+ +YL G L DFL H + +LL +S+++ +G+ YL
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYLG 144
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGT-FGYLAPEY 486
C +HRD+ + NIL++ ++DFGLAKLL +D++ +V + + APE
Sbjct: 145 SRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 487 LQSGRATEKSDVYSFGVLLLELVT 510
L + +SDV+SFGV+L EL T
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 129/287 (44%), Gaps = 37/287 (12%)
Query: 316 EDVVGSGGFGTV---------YRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKH 366
E V+G G FG V R + T D+ R F E I+G H
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD----FLSEASIMGQFDH 68
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N+++L G ++I +Y+ GSLD FL ++ ++ L+ G G+ Y
Sbjct: 69 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKY 125
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG--YLAP 484
L +HRD+ + NIL++ NL VSDFG++++L D+ T G + AP
Sbjct: 126 LSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543
E + + T SDV+S+G+++ E+++ G+RP W + ++ ++ +
Sbjct: 183 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPY-------------W--DMSNQDVIKAIE 227
Query: 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
+ M+ A+ ++ C DRP Q++ +L++ + +P
Sbjct: 228 EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNP 274
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 129/287 (44%), Gaps = 37/287 (12%)
Query: 316 EDVVGSGGFGTV---------YRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKH 366
E V+G G FG V R + T D+ R F E I+G H
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD----FLSEASIMGQFDH 89
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N+++L G ++I +Y+ GSLD FL ++ ++ L+ G G+ Y
Sbjct: 90 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKY 146
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG--YLAP 484
L +HRD+ + NIL++ NL VSDFG++++L D+ T G + AP
Sbjct: 147 LSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543
E + + T SDV+S+G+++ E+++ G+RP W + ++ ++ +
Sbjct: 204 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPY-------------W--DMSNQDVIKAIE 248
Query: 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
+ M+ A+ ++ C DRP Q++ +L++ + +P
Sbjct: 249 EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNP 295
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 129/287 (44%), Gaps = 37/287 (12%)
Query: 316 EDVVGSGGFGTV---------YRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKH 366
E V+G G FG V R + T D+ R F E I+G H
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD----FLSEASIMGQFDH 74
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N+++L G ++I +Y+ GSLD FL ++ ++ L+ G G+ Y
Sbjct: 75 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKY 131
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG--YLAP 484
L +HRD+ + NIL++ NL VSDFG++++L D+ T G + AP
Sbjct: 132 LSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543
E + + T SDV+S+G+++ E+++ G+RP W + ++ ++ +
Sbjct: 189 EAIAYRKFTSASDVWSYGIVMWEVMSYGERPY-------------W--DMSNQDVIKAIE 233
Query: 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
+ M+ A+ ++ C DRP Q++ +L++ + +P
Sbjct: 234 EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNP 280
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 136/306 (44%), Gaps = 52/306 (16%)
Query: 300 PYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG---TFAVKRIDRSREGSD-QVFE 355
P P+ + + +DV+G G FG V + + G A+KR+ D + F
Sbjct: 4 PDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 63
Query: 356 RELEILGSI-KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHG------------ 402
ELE+L + H N++NL G C L +Y G+L DFL +
Sbjct: 64 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 123
Query: 403 ------EGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVS 456
QQLL+++A + ARG+ YL + IHRD+ + NIL+ EN ++
Sbjct: 124 STASTLSSQQLLHFAADV------ARGMDYLSQK---QFIHRDLAARNILVGENYVAKIA 174
Query: 457 DFGLAKLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
DFGL++ +E +V + ++A E L T SDV+S+GVLL E+V+ G P
Sbjct: 175 DFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
Query: 515 TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRP 574
G+ L + RLE ++ C D + ++ +C P +RP
Sbjct: 232 Y------CGMTCAELYEKLPQGYRLEKPLN--CDD-------EVYDLMRQCWREKPYERP 276
Query: 575 SMNQVL 580
S Q+L
Sbjct: 277 SFAQIL 282
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 136/306 (44%), Gaps = 52/306 (16%)
Query: 300 PYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG---TFAVKRIDRSREGSD-QVFE 355
P P+ + + +DV+G G FG V + + G A+KR+ D + F
Sbjct: 14 PDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 73
Query: 356 RELEILGSI-KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHG------------ 402
ELE+L + H N++NL G C L +Y G+L DFL +
Sbjct: 74 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 133
Query: 403 ------EGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVS 456
QQLL+++A + ARG+ YL + IHRD+ + NIL+ EN ++
Sbjct: 134 STASTLSSQQLLHFAADV------ARGMDYLSQK---QFIHRDLAARNILVGENYVAKIA 184
Query: 457 DFGLAKLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
DFGL++ +E +V + ++A E L T SDV+S+GVLL E+V+ G P
Sbjct: 185 DFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
Query: 515 TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRP 574
G+ L + RLE ++ C D + ++ +C P +RP
Sbjct: 242 Y------CGMTCAELYEKLPQGYRLEKPLN--CDD-------EVYDLMRQCWREKPYERP 286
Query: 575 SMNQVL 580
S Q+L
Sbjct: 287 SFAQIL 292
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 21/204 (10%)
Query: 319 VGSGGFGTV----YRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+G G FG+V Y + ++ G AVK++ S + F+RE++IL ++ +V R
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 374 GYCRLPATK--LLIYDYLSMGSLDDFLHEHG---EGQQLLNWSARLKIALGSARGLAYLH 428
G P L+ +YL G L DFL H + +LL +S+++ +G+ YL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYLG 128
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGT-FGYLAPEY 486
C +HRD+ + NIL++ ++DFGLAKLL +D++ V + + APE
Sbjct: 129 SRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 487 LQSGRATEKSDVYSFGVLLLELVT 510
L + +SDV+SFGV+L EL T
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 29/283 (10%)
Query: 316 EDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERELEILGSIKHINLV 370
E ++GSG G V R+ A+K + E + F E I+G H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G +++ +Y+ GSLD FL H ++ L+ G G+ YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYLSD- 169
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG--YLAPEYLQ 488
+HRD+ + N+L+D NL VSDFGL+++L D+ T G + APE +
Sbjct: 170 --LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 489 SGRATEKSDVYSFGVLLLE-LVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
+ SDV+SFGV++ E L G+RP W + + + V +
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPY-------------W--NMTNRDVISSVEEGYR 272
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
A M A+ ++ C + RP +Q++ +L+ + SP
Sbjct: 273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 29/283 (10%)
Query: 316 EDVVGSGGFGTV----YRMVMNDCGTFAVKRIDRS-REGSDQVFERELEILGSIKHINLV 370
E ++GSG G V R+ A+K + E + F E I+G H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G +++ +Y+ GSLD FL H ++ L+ G G+ YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYLSD- 169
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG--YLAPEYLQ 488
+HRD+ + N+L+D NL VSDFGL+++L D+ T G + APE +
Sbjct: 170 --LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 489 SGRATEKSDVYSFGVLLLE-LVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547
+ SDV+SFGV++ E L G+RP W + + + V +
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPY-------------W--NMTNRDVISSVEEGYR 272
Query: 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
A M A+ ++ C + RP +Q++ +L+ + SP
Sbjct: 273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 136/306 (44%), Gaps = 52/306 (16%)
Query: 300 PYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG---TFAVKRIDRSREGSD-QVFE 355
P P+ + + +DV+G G FG V + + G A+KR+ D + F
Sbjct: 11 PDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 70
Query: 356 RELEILGSI-KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHG------------ 402
ELE+L + H N++NL G C L +Y G+L DFL +
Sbjct: 71 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 130
Query: 403 ------EGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVS 456
QQLL+++A + ARG+ YL + IHR++ + NIL+ EN ++
Sbjct: 131 STASTLSSQQLLHFAADV------ARGMDYLSQK---QFIHRNLAARNILVGENYVAKIA 181
Query: 457 DFGLAKLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
DFGL++ +E +V + ++A E L T SDV+S+GVLL E+V+ G P
Sbjct: 182 DFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
Query: 515 TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRP 574
G+ L + RLE ++ C D + ++ +C P +RP
Sbjct: 239 YC------GMTCAELYEKLPQGYRLEKPLN--CDD-------EVYDLMRQCWREKPYERP 283
Query: 575 SMNQVL 580
S Q+L
Sbjct: 284 SFAQIL 289
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 134/293 (45%), Gaps = 40/293 (13%)
Query: 318 VVGSGGFGTVYRMVMNDCGT----FAVKRIDRSREGSD-QVFERELEILGSIKHINLVNL 372
V+G G FG VY D A+K + R E + F RE ++ + H N++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 373 RGYCRLPATKL--LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
G LP L ++ Y+ G L F+ + + + L ARG+ YL
Sbjct: 88 IG-IMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEYLAEQ 143
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE-------AHVTTVVAGTFGYLA 483
K +HRD+ + N +LDE+ V+DFGLA+ ++D E H V T A
Sbjct: 144 ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT----A 196
Query: 484 PEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543
E LQ+ R T KSDV+SFGVLL EL+T P R ++ + L + RL
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPP-----YRHIDPFDLTHFLAQGRRLPQ-- 249
Query: 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSDFY 596
+ C D ++ ++ +C +A+P RP+ ++ +EQ ++S D Y
Sbjct: 250 PEYCPD-------SLYQVMQQCWEADPAVRPTFRVLVGEVEQ-IVSALLGDHY 294
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 21 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 80 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 130
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 232
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 233 FVT-EGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 113/234 (48%), Gaps = 27/234 (11%)
Query: 299 MPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFER- 356
+P +C E E L G+GGFG V R + D G A+K+ +E S + ER
Sbjct: 8 LPTQTCGPWEMKERL------GTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERW 59
Query: 357 --ELEILGSIKHINLVNLR----GYCRLPATKL--LIYDYLSMGSLDDFLHEHGEGQQLL 408
E++I+ + H N+V+ R G +L L L +Y G L +L++ L
Sbjct: 60 CLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK 119
Query: 409 NWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLV 465
R ++ S+ L YLH + +IIHRD+K NI+L + L + D G AK L
Sbjct: 120 EGPIRTLLSDISS-ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL- 174
Query: 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTF 519
++ + T GT YLAPE L+ + T D +SFG L E +TG RP P +
Sbjct: 175 -DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW 227
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 319 VGSGGFGTVYR------MVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNL 372
+G G FG V+ + D AVK + + E + Q F+RE E+L ++H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQL-----------LNWSARLKIALGSA 421
G C L++++Y+ G L+ FL HG +L L L +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAH-VTTVVAGTFG 480
G+ YL +HRD+ + N L+ + L + DFG+++ + + + V
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
++ PE + + T +SDV+SFGV+L E+ T GK+P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTF---------AVKRIDRSREGSDQVFERELEILGSIKHINL 369
+G G FG V+ + +C AVK + + + + + F RE E+L +++H ++
Sbjct: 21 LGEGAFGKVF---LAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQL---------LNWSARLKIALGS 420
V G C +++++Y+ G L+ FL HG L L S L IA
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAH-VTTVVAGTF 479
A G+ YL +HRD+ + N L+ ENL + DFG+++ + + + V
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 480 GYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
++ PE + + T +SDV+S GV+L E+ T GK+P
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 19/206 (9%)
Query: 317 DVVGSGGFGTVY---RMVMNDCGTFAVKRI---DRSREGSDQVFERELEILGSIKHINLV 370
D +G GG TVY ++N A+K I R +E + + FERE+ + H N+V
Sbjct: 17 DKLGGGGMSTVYLAEDTILN--IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHG--EGQQLLNWSARLKIALGSARGLAYLH 428
++ L+ +Y+ +L +++ HG +N++ ++ + A
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA------- 127
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
HD +I+HRDIK NIL+D N + DFG+AK L + T V GT Y +PE +
Sbjct: 128 HDM--RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK 185
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
E +D+YS G++L E++ G+ P
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 113/234 (48%), Gaps = 27/234 (11%)
Query: 299 MPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFER- 356
+P +C E E L G+GGFG V R + D G A+K+ +E S + ER
Sbjct: 9 LPTQTCGPWEMKERL------GTGGFGYVLRWIHQDTGEQVAIKQC--RQELSPKNRERW 60
Query: 357 --ELEILGSIKHINLVNLR----GYCRLPATKL--LIYDYLSMGSLDDFLHEHGEGQQLL 408
E++I+ + H N+V+ R G +L L L +Y G L +L++ L
Sbjct: 61 CLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK 120
Query: 409 NWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLV 465
R ++ S+ L YLH + +IIHRD+K NI+L + L + D G AK L
Sbjct: 121 EGPIRTLLSDISS-ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL- 175
Query: 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTF 519
++ + T GT YLAPE L+ + T D +SFG L E +TG RP P +
Sbjct: 176 -DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW 228
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 34/269 (12%)
Query: 319 VGSGGFGTVY-RMVMNDCGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRG 374
+G G FG VY N A+K + ++ + G + RE+EI ++H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDCC 432
Y LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 76 YFHDSTRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH---S 126
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
K+IHRDIK N+LL E ++DFG + V + + GT YL PE ++
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 493 TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADM 552
EK D++S GVL E + GK P + + +T + +R+E D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQDTYKRISRVEFTF------PDF 228
Query: 553 ETVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 229 VT-EGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 319 VGSGGFGTVYR------MVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNL 372
+G G FG V+ + D AVK + + E + Q F+RE E+L ++H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQL-----------LNWSARLKIALGSA 421
G C L++++Y+ G L+ FL HG +L L L +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAH-VTTVVAGTFG 480
G+ YL +HRD+ + N L+ + L + DFG+++ + + + V
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
++ PE + + T +SDV+SFGV+L E+ T GK+P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 19 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 78 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 128
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 230
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 231 FVT-EGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 16 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 227
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 228 FVT-EGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 15 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 73
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 74 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 124
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 226
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 227 FVT-EGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 19 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 78 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 128
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 230
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 231 FVT-EGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 21 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 80 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 130
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 232
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 233 FVT-EGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 319 VGSGGFGTVYR------MVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNL 372
+G G FG V+ + D AVK + + E + Q F+RE E+L ++H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQL-----------LNWSARLKIALGSA 421
G C L++++Y+ G L+ FL HG +L L L +A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAH-VTTVVAGTFG 480
G+ YL +HRD+ + N L+ + L + DFG+++ + + + V
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
++ PE + + T +SDV+SFGV+L E+ T GK+P
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 121/270 (44%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 42 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 101 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCHSK- 153
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 154 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 208
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + T + +R+E D
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPP---------FEANTYQETYKRISRVEFTF------PD 253
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 254 FVT-EGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 20 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 79 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 129
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 231
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 232 FVT-EGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 16 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 227
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 228 FVT-EGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 33 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 91
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 92 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 142
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 199
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 244
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 245 FVT-EGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 152/328 (46%), Gaps = 49/328 (14%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 4 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 64 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 121
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 122 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGL 524
EE ++A E + T +SDV+S+GV + EL+T G +P D G+
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------GI 226
Query: 525 NVVGWMNTLLKENRLED---------VIDKRC----ADADMETVEAILEIAARCTDANPD 571
+ L K RL +I ++C AD+ + E I+E + D
Sbjct: 227 PASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD---- 282
Query: 572 DRPSMNQVLQLLEQ-EVMSPCPSDFYES 598
P V+Q E+ + SP S+FY +
Sbjct: 283 --PQRYLVIQGDERMHLPSPTDSNFYRA 308
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 145/307 (47%), Gaps = 49/307 (15%)
Query: 318 VVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREGSDQVFERELEILGSIKHINLV 370
V+GSG FGTVY+ + G A+K + S + + ++ + E ++ S+ + ++
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVC 90
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQLLNWSARLKIALGSARGLAYL 427
L G C L +T LI + G L D++ EH + Q LLNW ++ A+G+ YL
Sbjct: 91 RLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 143
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT-FGYLAPEY 486
+++HRD+ + N+L+ ++DFGLAKLL EE ++A E
Sbjct: 144 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 200
Query: 487 LQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLED---- 541
+ T +SDV+S+GV + EL+T G +P D G+ + L K RL
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------GIPASEISSILEKGERLPQPPIC 254
Query: 542 -----VIDKRC----ADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ-EVMSPC 591
+I ++C AD+ + E I+E + D P V+Q E+ + SP
Sbjct: 255 TIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD------PQRYLVIQGDERMHLPSPT 308
Query: 592 PSDFYES 598
S+FY +
Sbjct: 309 DSNFYRA 315
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 29/259 (11%)
Query: 270 KERAVKRYTEVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYR 329
++R ++R + R+ V+ T + G+ P + I K + V+GSG FGTVY+
Sbjct: 14 RKRTLRRLLQERELVEPLTPS------GEAPNQALLRILKETEFKKIKVLGSGAFGTVYK 67
Query: 330 MVMNDCGTFAVK---RIDRSREGSDQVFEREL----EILGSIKHINLVNLRGYCRLPATK 382
+ G VK I RE + +E+ ++ S+ + ++ L G C L +T
Sbjct: 68 GLWIPEGE-KVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC-LTSTV 125
Query: 383 LLIYDYLSMGSLDDFLHEHGE---GQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRD 439
LI + G L D++ EH + Q LLNW ++ A+G+ YL +++HRD
Sbjct: 126 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRD 176
Query: 440 IKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDV 498
+ + N+L+ ++DFGLAKLL EE ++A E + T +SDV
Sbjct: 177 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDV 236
Query: 499 YSFGVLLLELVT-GKRPTD 516
+S+GV + EL+T G +P D
Sbjct: 237 WSYGVTVWELMTFGSKPYD 255
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 16 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 227
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 228 FVT-EGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 13 LGKGKFGNVY-LAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 71
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 72 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 122
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 224
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 225 FVT-EGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 17 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 76 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 126
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 228
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 229 FVT-EGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 16 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 227
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 228 FVT-EGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 21 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 80 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 130
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 232
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 233 FVT-EGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 16 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 227
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 228 FVT-EGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 120/270 (44%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 21 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y G + + E Q+L + + + A L+Y H
Sbjct: 80 GYFHDATRVYLILEYAPRGEV------YKELQKLSKFDEQRTATYITELANALSYCH--- 130
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + T + GT YL PE ++
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 232
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 233 FVT-EGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 17 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 76 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 126
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + + T ++GT YL PE ++
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 228
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 229 FVT-EGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 18 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 77 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 127
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E +++FG + V + T + GT YL PE ++
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 229
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 230 FVT-EGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 61 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 118
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 119 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 2 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 62 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGXLLDYVREHKDNIGSQY 119
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 120 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 2 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 62 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY 119
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 120 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 61 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY 118
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 119 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 38/285 (13%)
Query: 319 VGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNL 372
+G G FG V+ D AVK + + + F+RE E+L +++H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHG------------EGQQLLNWSARLKIALGS 420
G C +++++Y+ G L+ FL HG + + L S L IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAH-VTTVVAGTF 479
A G+ YL +HRD+ + N L+ NL + DFG+++ + + + V
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 480 GYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENR 538
++ PE + + T +SDV+SFGV+L E+ T GK+P W L
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP--------------WFQ-LSNTEV 244
Query: 539 LEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
+E + R + + + ++ C P R ++ ++ ++L
Sbjct: 245 IECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 19 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 78 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 128
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E +++FG + V + T + GT YL PE ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 230
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 231 FVT-EGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 19 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 78 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 128
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + + GT YL PE ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 230
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 231 FVT-EGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 5 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 64
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 65 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY 122
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 123 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 173
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 174 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 4 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 64 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY 121
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 122 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 16 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + + GT YL PE ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 227
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 228 FVT-EGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 63 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY 120
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 121 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 61 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGXLLDYVREHKDNIGSQY 118
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 119 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 17 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 76 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 126
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + + GT YL PE ++
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRM 183
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 228
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 229 FVT-EGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 49/328 (14%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 7 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 66
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 67 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 124
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 125 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 175
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGL 524
EE ++A E + T +SDV+S+GV + EL+T G +P D G+
Sbjct: 176 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------GI 229
Query: 525 NVVGWMNTLLKENRLED---------VIDKRC----ADADMETVEAILEIAARCTDANPD 571
+ L K RL +I +C AD+ + E I+E + D
Sbjct: 230 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD---- 285
Query: 572 DRPSMNQVLQLLEQ-EVMSPCPSDFYES 598
P V+Q E+ + SP S+FY +
Sbjct: 286 --PQRYLVIQGDERMHLPSPTDSNFYRA 311
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 49/328 (14%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 63 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 120
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 121 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGL 524
EE ++A E + T +SDV+S+GV + EL+T G +P D G+
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------GI 225
Query: 525 NVVGWMNTLLKENRLED---------VIDKRC----ADADMETVEAILEIAARCTDANPD 571
+ L K RL +I +C AD+ + E I+E + D
Sbjct: 226 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD---- 281
Query: 572 DRPSMNQVLQLLEQ-EVMSPCPSDFYES 598
P V+Q E+ + SP S+FY +
Sbjct: 282 --PQRYLVIQGDERMHLPSPTDSNFYRA 307
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 158/338 (46%), Gaps = 51/338 (15%)
Query: 289 STKLITFHGDMPYPSCEIIEKLEALDEED--VVGSGGFGTVYRMVMNDCG-----TFAVK 341
+T+ + F G P+ ++ L+ + + V+GSG FGTVY+ + G A+K
Sbjct: 16 TTENLYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK 75
Query: 342 RIDR--SREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH 399
+ S + + ++ + E ++ S+ + ++ L G C L +T LI + G L D++
Sbjct: 76 ELREATSPKANKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVR 133
Query: 400 EHGEG---QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVS 456
EH + Q LLNW ++ A+G+ YL +++HRD+ + N+L+ ++
Sbjct: 134 EHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 184
Query: 457 DFGLAKLLVDEEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
DFGLAKLL EE ++A E + T +SDV+S+GV + EL+T G +P
Sbjct: 185 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
Query: 515 TDPTFVKRGLNVVGWMNTLLKENRLED---------VIDKRC----ADADMETVEAILEI 561
D G+ + L K RL +I +C AD+ + E I+E
Sbjct: 245 YD------GIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 298
Query: 562 AARCTDANPDDRPSMNQVLQLLEQ-EVMSPCPSDFYES 598
+ D P V+Q E+ + SP S+FY +
Sbjct: 299 SKMARD------PQRYLVIQGDERMHLPSPTDSNFYRA 330
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 49/328 (14%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 8 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 68 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 125
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 126 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGL 524
EE ++A E + T +SDV+S+GV + EL+T G +P D G+
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------GI 230
Query: 525 NVVGWMNTLLKENRLED---------VIDKRC----ADADMETVEAILEIAARCTDANPD 571
+ L K RL +I +C AD+ + E I+E + D
Sbjct: 231 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD---- 286
Query: 572 DRPSMNQVLQLLEQ-EVMSPCPSDFYES 598
P V+Q E+ + SP S+FY +
Sbjct: 287 --PQRYLVIQGDERMHLPSPTDSNFYRA 312
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 61 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 118
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 119 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 151/328 (46%), Gaps = 49/328 (14%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 63 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY 120
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFG AKLL
Sbjct: 121 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGL 524
EE ++A E + T +SDV+S+GV + EL+T G +P D G+
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------GI 225
Query: 525 NVVGWMNTLLKENRLED---------VIDKRC----ADADMETVEAILEIAARCTDANPD 571
+ L K RL +I ++C AD+ + E I+E + D
Sbjct: 226 PASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD---- 281
Query: 572 DRPSMNQVLQLLEQ-EVMSPCPSDFYES 598
P V+Q E+ + SP S+FY +
Sbjct: 282 --PQRYLVIQGDERMHLPSPTDSNFYRA 307
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 4 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 64 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 121
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 122 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 4 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 64 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 121
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 122 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 132/283 (46%), Gaps = 32/283 (11%)
Query: 319 VGSGGFGTV--YRMVMNDCGTFAVKRIDRSREGSDQV----FERELEILGSIKHINLVNL 372
+G G FG V Y + GT + + +EG ++RE+EIL ++ H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 373 RGYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG-QQLLNWSARLKIALGSARGLAYLHH 429
+G C K L+ +Y+ +GSL D+L H G QLL ++ ++ G+AYLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQI------CEGMAYLHA 129
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG---TFGYLAPEY 486
IHR + + N+LLD + + DFGLAK + + + G F Y APE
Sbjct: 130 Q---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APEC 185
Query: 487 LQSGRATEKSDVYSFGVLLLELVT---GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543
L+ + SDV+SFGV L EL+T + F + + G M L RL +++
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL----RLTELL 241
Query: 544 DK--RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
++ R D E I + C + RP+ ++ +L+
Sbjct: 242 ERGERLPRPDRCPCE-IYHLMKNCWETEASFRPTFQNLVPILQ 283
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 23/211 (10%)
Query: 318 VVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREGSDQVFERELEILGSIKHINLV 370
V+GSG FGTVY+ + G A+K + S + + ++ + E ++ S+ + ++
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVC 74
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQLLNWSARLKIALGSARGLAYL 427
L G C L +T LI + G L D++ EH + Q LLNW ++ A+G+ YL
Sbjct: 75 RLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 127
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT-FGYLAPEY 486
+++HRD+ + N+L+ ++DFGLAKLL EE ++A E
Sbjct: 128 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184
Query: 487 LQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
+ T +SDV+S+GV + EL+T G +P D
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 19 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 78 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 128
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + + GT YL PE ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 230
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 231 FVT-EGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 18 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 77 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 127
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + + GT YL PE ++
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRM 184
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 229
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 230 FVT-EGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 132/283 (46%), Gaps = 32/283 (11%)
Query: 319 VGSGGFGTV--YRMVMNDCGTFAVKRIDRSREGSDQV----FERELEILGSIKHINLVNL 372
+G G FG V Y + GT + + +EG ++RE+EIL ++ H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 373 RGYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG-QQLLNWSARLKIALGSARGLAYLHH 429
+G C K L+ +Y+ +GSL D+L H G QLL ++ ++ G+AYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQI------CEGMAYLHA 130
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG---TFGYLAPEY 486
IHR + + N+LLD + + DFGLAK + + + G F Y APE
Sbjct: 131 Q---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APEC 186
Query: 487 LQSGRATEKSDVYSFGVLLLELVT---GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543
L+ + SDV+SFGV L EL+T + F + + G M L RL +++
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVL----RLTELL 242
Query: 544 DK--RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
++ R D E I + C + RP+ ++ +L+
Sbjct: 243 ERGERLPRPDRCPCE-IYHLMKNCWETEASFRPTFQNLVPILQ 284
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 16 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 75 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 125
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + + GT YL PE ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 227
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 228 FVT-EGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 151/328 (46%), Gaps = 49/328 (14%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 63 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 120
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFG AKLL
Sbjct: 121 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGL 524
EE ++A E + T +SDV+S+GV + EL+T G +P D G+
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------GI 225
Query: 525 NVVGWMNTLLKENRLED---------VIDKRC----ADADMETVEAILEIAARCTDANPD 571
+ L K RL +I ++C AD+ + E I+E + D
Sbjct: 226 PASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD---- 281
Query: 572 DRPSMNQVLQLLEQ-EVMSPCPSDFYES 598
P V+Q E+ + SP S+FY +
Sbjct: 282 --PQRYLVIQGDERMHLPSPTDSNFYRA 307
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 145/305 (47%), Gaps = 35/305 (11%)
Query: 300 PYPSCEIIEKLEA--LDEEDVVGSGGFGTVYRMVMNDCGT----FAVKRIDRS-REGSDQ 352
P+ S E ++++ + E+V+G+G FG V R + G A+K + E +
Sbjct: 1 PWGSMEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR 60
Query: 353 VFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSA 412
F E I+G +H N++ L G +++ +++ G+LD FL + ++
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG 120
Query: 413 RLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVT 472
L+ G A G+ YL +HRD+ + NIL++ NL VSDFGL++ L +E +
Sbjct: 121 MLR---GIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFL-EENSSDP 173
Query: 473 TVVAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNV 526
T + G + APE + + T SD +S+G+++ E+++ G+R P + +V
Sbjct: 174 TYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGER---PYWDMSNQDV 230
Query: 527 VGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQE 586
+ N + ++ RL D C ++ ++ C + + RP QV+ L++
Sbjct: 231 I---NAIEQDYRLPPPPD--CPT-------SLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
Query: 587 VMSPC 591
+ +P
Sbjct: 279 IRNPA 283
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 21/204 (10%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRIDRSREGSDQVFE---RELEILGSIKHINLVNLR 373
+G G FG VY R V N A+K++ S + S++ ++ +E+ L ++H N + R
Sbjct: 62 IGHGSFGAVYFARDVRN-SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
G T L+ +Y +GS D L H + Q + +A + G+ +GLAYLH
Sbjct: 121 GCYLREHTAWLVMEY-CLGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHSH--- 173
Query: 434 KIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY---LQSG 490
+IHRD+K+ NILL E + DFG A ++ V GT ++APE + G
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEG 228
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
+ K DV+S G+ +EL K P
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPP 252
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 21/204 (10%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRIDRSREGSDQVFE---RELEILGSIKHINLVNLR 373
+G G FG VY R V N A+K++ S + S++ ++ +E+ L ++H N + R
Sbjct: 23 IGHGSFGAVYFARDVRN-SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
G T L+ +Y +GS D L H + Q + +A + G+ +GLAYLH
Sbjct: 82 GCYLREHTAWLVMEY-CLGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLH---SH 134
Query: 434 KIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY---LQSG 490
+IHRD+K+ NILL E + DFG A ++ V GT ++APE + G
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEG 189
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
+ K DV+S G+ +EL K P
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPP 213
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 28/281 (9%)
Query: 319 VGSGGFGTV----YRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNL 372
+G G FG V Y + G + ++ G +++E++IL ++ H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 373 RGYCR--LPATKLLIYDYLSMGSLDDFLHEHGEG-QQLLNWSARLKIALGSARGLAYLHH 429
+G C A+ L+ +Y+ +GSL D+L H G QLL ++ ++ G+AYLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI------CEGMAYLH- 151
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD--EEAHVTTVVAGTFGYLAPEYL 487
IHRD+ + N+LLD + + DFGLAK + + E V + APE L
Sbjct: 152 --AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 488 QSGRATEKSDVYSFGVLLLELVT--GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545
+ + SDV+SFGV L EL+T + PT + L ++G + RL +++++
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT---KFLELIGIAQGQMTVLRLTELLER 266
Query: 546 --RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
R D E + + C + RP+ ++ +L+
Sbjct: 267 GERLPRPDKCPAE-VYHLMKNCWETEASFRPTFENLIPILK 306
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 23/211 (10%)
Query: 318 VVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREGSDQVFERELEILGSIKHINLV 370
V+GSG FGTVY+ + G A+K + S + + ++ + E ++ S+ + ++
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVC 77
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQLLNWSARLKIALGSARGLAYL 427
L G C L +T LI + G L D++ EH + Q LLNW ++ A G+ YL
Sbjct: 78 RLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEGMNYL 130
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT-FGYLAPEY 486
+++HRD+ + N+L+ ++DFGLAKLL EE ++A E
Sbjct: 131 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 187
Query: 487 LQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
+ T +SDV+S+GV + EL+T G +P D
Sbjct: 188 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 116/284 (40%), Gaps = 36/284 (12%)
Query: 313 LDEEDVV-----GSGGFGTVYRMVMNDCGTFAVKRIDRSREGSD--QVFERELEILGSIK 365
L+ ED+V G G FG V+ + T + R D F +E IL
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
H N+V L G C ++ + + G FL G L L++ +A G+
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA---RLRVKTLLQMVGDAAAGME 227
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF-----G 480
YL CC IHRD+ + N L+ E +SDFG+++ EEA +G
Sbjct: 228 YLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVK 280
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLE 540
+ APE L GR + +SDV+SFG+LL E + P + + K RL
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR-----EFVEKGGRLP 335
Query: 541 DVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
+ C D A+ + +C P RPS + + Q L+
Sbjct: 336 --CPELCPD-------AVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 21 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y G + + E Q+L + + + A L+Y H
Sbjct: 80 GYFHDATRVYLILEYAPRGEV------YKELQKLSKFDEQRTATYITELANALSYCH--- 130
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + + GT YL PE ++
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRM 187
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 232
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 233 FVT-EGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 19 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 78 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 128
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + + GT YL PE ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + + T + +R+E D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEAN---------TYQETYKRISRVEFTF------PD 230
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 231 FVT-EGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 138/293 (47%), Gaps = 48/293 (16%)
Query: 315 EEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
E +++GSGGFG V++ D T+ +KR+ + E + ERE++ L + H+N+V+
Sbjct: 15 EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVHYN 70
Query: 374 G----YCRLPATK------------LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
G + P T + ++ G+L+ ++ E G++L A L++
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLA-LELF 128
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
+G+ Y+H K+I+RD+K SNI L + + + DFGL L ++ + G
Sbjct: 129 EQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KG 183
Query: 478 TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537
T Y++PE + S ++ D+Y+ G++L EL+ D F T L++
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAF------ETSKFFTDLRDG 234
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
+ D+ DK+ E L + P+DRP+ +++L+ L SP
Sbjct: 235 IISDIFDKK---------EKTL--LQKLLSKKPEDRPNTSEILRTLTVWKKSP 276
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 36/270 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + ++ + G + RE+EI ++H N++ L
Sbjct: 42 LGKGKFGNVY-LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
GY LI +Y +G++ + E Q+L + + + A L+Y H
Sbjct: 101 GYFHDATRVYLILEYAPLGTV------YRELQKLSKFDEQRTATYITELANALSYCH--- 151
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRDIK N+LL E ++DFG + V + + GT YL PE ++
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRM 208
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
EK D++S GVL E + GK P + T + +R+E D
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPP---------FEANTYQETYKRISRVEFTF------PD 253
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581
T E ++ +R NP RP + +VL+
Sbjct: 254 FVT-EGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G FG V M+ + G AVK I + + Q F E ++ ++H NLV L G
Sbjct: 14 IGKGEFGDV--MLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 378 LPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
L ++ +Y++ GSL D+L G + +L LK +L + YL + +
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 124
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS 496
HRD+ + N+L+ E+ VSDFGL K E + + APE L+ + + KS
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 497 DVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVE 556
DV+SFG+LL E+ + R P L+DV+ + M+ +
Sbjct: 181 DVWSFGILLWEIYSFGRVPYPRI------------------PLKDVVPRVEKGYKMDAPD 222
Query: 557 ----AILEIAARCTDANPDDRPSMNQVLQLLEQ 585
A+ E+ C + RPS Q+ + LE
Sbjct: 223 GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 255
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 317 DVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+V+GSG F V+ + G FA+K I +S D E E+ +L IKH N+V L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
L+ +S G L D + E G + + S ++ L + + YLH + I
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTE-KDASLVIQQVLSAVK---YLHEN---GI 127
Query: 436 IHRDIKSSNILL---DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
+HRD+K N+L +EN + ++DFGL+K+ E+ + + GT GY+APE L
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKPY 184
Query: 493 TEKSDVYSFGVLLLELVTGKRP 514
++ D +S GV+ L+ G P
Sbjct: 185 SKAVDCWSIGVITYILLCGYPP 206
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 116/284 (40%), Gaps = 36/284 (12%)
Query: 313 LDEEDVV-----GSGGFGTVYRMVMNDCGTFAVKRIDRSREGSD--QVFERELEILGSIK 365
L+ ED+V G G FG V+ + T + R D F +E IL
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
H N+V L G C ++ + + G FL G L L++ +A G+
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA---RLRVKTLLQMVGDAAAGME 227
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF-----G 480
YL CC IHRD+ + N L+ E +SDFG+++ EEA +G
Sbjct: 228 YLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVK 280
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLE 540
+ APE L GR + +SDV+SFG+LL E + P + + K RL
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR-----EFVEKGGRLP 335
Query: 541 DVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
+ C D A+ + +C P RPS + + Q L+
Sbjct: 336 --CPELCPD-------AVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRI---DRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+G+G G V+++ G +++ + +Q+ REL++L +V G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYGA 75
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGE-GQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ GSLD L + G +Q+L K+++ +GL YL K
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH--K 128
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
I+HRD+K SNIL++ E + DFG++ L+DE A+ GT Y++PE LQ +
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN---EFVGTRSYMSPERLQGTHYSV 185
Query: 495 KSDVYSFGVLLLELVTGKRPTDPTFV 520
+SD++S G+ L+E+ G+ P P +
Sbjct: 186 QSDIWSMGLSLVEMAVGRYPRPPMAI 211
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G FG V M+ + G AVK I + + Q F E ++ ++H NLV L G
Sbjct: 29 IGKGEFGDV--MLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 378 LPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
L ++ +Y++ GSL D+L G + +L LK +L + YL + +
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 139
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS 496
HRD+ + N+L+ E+ VSDFGL K E + + APE L+ + + KS
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 497 DVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVE 556
DV+SFG+LL E+ + R P L+DV+ + M+ +
Sbjct: 196 DVWSFGILLWEIYSFGRVPYPRI------------------PLKDVVPRVEKGYKMDAPD 237
Query: 557 ----AILEIAARCTDANPDDRPSMNQVLQLLEQ 585
A+ E+ C + RPS Q+ + LE
Sbjct: 238 GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 270
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 150/328 (45%), Gaps = 49/328 (14%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 3 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 63 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY 120
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFG AKLL
Sbjct: 121 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGL 524
EE ++A E + T +SDV+S+GV + EL+T G +P D G+
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------GI 225
Query: 525 NVVGWMNTLLKENRLED---------VIDKRC----ADADMETVEAILEIAARCTDANPD 571
+ L K RL +I +C AD+ + E I+E + D
Sbjct: 226 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD---- 281
Query: 572 DRPSMNQVLQLLEQ-EVMSPCPSDFYES 598
P V+Q E+ + SP S+FY +
Sbjct: 282 --PQRYLVIQGDERMHLPSPTDSNFYRA 307
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+ SG FGTVY+ + G A+K + S +
Sbjct: 8 GEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 68 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY 125
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 126 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 150/328 (45%), Gaps = 49/328 (14%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 8 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 68 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 125
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFG AKLL
Sbjct: 126 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 176
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGL 524
EE ++A E + T +SDV+S+GV + EL+T G +P D G+
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------GI 230
Query: 525 NVVGWMNTLLKENRLED---------VIDKRC----ADADMETVEAILEIAARCTDANPD 571
+ L K RL +I +C AD+ + E I+E + D
Sbjct: 231 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD---- 286
Query: 572 DRPSMNQVLQLLEQ-EVMSPCPSDFYES 598
P V+Q E+ + SP S+FY +
Sbjct: 287 --PQRYLVIQGDERMHLPSPTDSNFYRA 312
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSI 364
LE D +G G FG VY + F A+K + ++ + G + RE+EI +
Sbjct: 11 LEDFDIGRPLGKGKFGNVY-LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--AR 422
+H N++ L GY LI +Y +G++ + E Q+L + + + A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTV------YRELQKLSRFDEQRTATYITELAN 123
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYL 482
L+Y H ++IHRDIK N+LL N E ++DFG + V + T + GT YL
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYL 177
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRPTD 516
PE ++ EK D++S GVL E + G P +
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 23/211 (10%)
Query: 318 VVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREGSDQVFERELEILGSIKHINLV 370
V+GSG FGTVY+ + G A+K + S + + ++ + E ++ S+ + ++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAYVMASVDNPHVC 84
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQLLNWSARLKIALGSARGLAYL 427
L G C L +T LI + G L D++ EH + Q LLNW ++ A+G+ YL
Sbjct: 85 RLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 137
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT-FGYLAPEY 486
+++HRD+ + N+L+ ++DFG AKLL EE ++A E
Sbjct: 138 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 487 LQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
+ T +SDV+S+GV + EL+T G +P D
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 150/328 (45%), Gaps = 49/328 (14%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+ SG FGTVY+ + G A+K + S +
Sbjct: 8 GEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 68 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 125
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 126 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 176
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGL 524
EE ++A E + T +SDV+S+GV + EL+T G +P D G+
Sbjct: 177 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------GI 230
Query: 525 NVVGWMNTLLKENRLED---------VIDKRC----ADADMETVEAILEIAARCTDANPD 571
+ L K RL +I +C AD+ + E I+E + D
Sbjct: 231 PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD---- 286
Query: 572 DRPSMNQVLQLLEQ-EVMSPCPSDFYES 598
P V+Q E+ + SP S+FY +
Sbjct: 287 --PQRYLVIQGDERMHLPSPTDSNFYRA 312
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+ SG FGTVY+ + G A+K + S +
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 61 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 118
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFGLAKLL
Sbjct: 119 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDR--SREG 349
G+ P + I K + V+GSG FGTVY+ + G A+K + S +
Sbjct: 1 GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ S+ + ++ L G C L +T LI + G L D++ EH + Q
Sbjct: 61 NKEILD-EAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQY 118
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466
LLNW ++ A+G+ YL +++HRD+ + N+L+ ++DFG AKLL
Sbjct: 119 LLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 169
Query: 467 EEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
EE ++A E + T +SDV+S+GV + EL+T G +P D
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 317 DVVGSGGFGTVYR-MVMNDCGTFAVKRIDRSREGSDQVFERELEI--LGSIKHINLVNLR 373
+V G FG V++ ++N+ + I Q ++ E E+ L +KH N++
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQ-----DKQSWQNEYEVYSLPGMKHENILQFI 84
Query: 374 GYCR----LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
G + + LI + GSL DFL + +++W+ IA ARGLAYLH
Sbjct: 85 GAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHE 139
Query: 430 DC-------CPKIIHRDIKSSNILLDENLEPHVSDFGLA-KLLVDEEAHVTTVVAGTFGY 481
D P I HRDIKS N+LL NL ++DFGLA K + A T GT Y
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 482 LAPEYLQSGRATEKS-----DVYSFGVLLLELVT 510
+APE L+ ++ D+Y+ G++L EL +
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 111/216 (51%), Gaps = 20/216 (9%)
Query: 317 DVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV---FERELEILGSIKHINLVNL 372
D +G G FG V G AVK ++R + S V +RE++ L +H +++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
P ++ +Y+S G L D++ +HG +++ + RL + SA + H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM--EARRLFQQILSAVDYCHRH---- 130
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR- 491
++HRD+K N+LLD ++ ++DFGL+ ++ D E T+ G+ Y APE + SGR
Sbjct: 131 -MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVI-SGRL 186
Query: 492 -ATEKSDVYSFGVLLLELVTGKRPTD----PTFVKR 522
A + D++S GV+L L+ G P D PT K+
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK 222
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G FG V M+ + G AVK I + + Q F E ++ ++H NLV L G
Sbjct: 20 IGKGEFGDV--MLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 378 LPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
L ++ +Y++ GSL D+L G + +L LK +L + YL + +
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 130
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS 496
HRD+ + N+L+ E+ VSDFGL K E + + APE L+ + KS
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 497 DVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVE 556
DV+SFG+LL E+ + R P L+DV+ + M+ +
Sbjct: 187 DVWSFGILLWEIYSFGRVPYPRI------------------PLKDVVPRVEKGYKMDAPD 228
Query: 557 ----AILEIAARCTDANPDDRPSMNQVLQLLEQ 585
A+ E+ C + RPS Q+ + LE
Sbjct: 229 GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 261
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 128/286 (44%), Gaps = 41/286 (14%)
Query: 306 IIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRS---REGSDQVFERELEIL 361
I EK+E +++G G F VYR G A+K ID+ + G Q + E++I
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 362 GSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEH------GEGQQLLNWSARLK 415
+KH +++ L Y L+ + G ++ +L E + ++
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIIT-- 123
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA-KLLVDEEAHVTTV 474
G+ YLH I+HRD+ SN+LL N+ ++DFGLA +L + E H T
Sbjct: 124 -------GMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-- 171
Query: 475 VAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLL 534
+ GT Y++PE +SDV+S G + L+ G+ P D VK LN V +L
Sbjct: 172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV-----VL 226
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
+ + + +E + I ++ R NP DR S++ VL
Sbjct: 227 ADYEMPSFL-------SIEAKDLIHQLLRR----NPADRLSLSSVL 261
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRS----REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG V + ND +A+K +++ R VF +EL+I+ ++H LVNL
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF-KELQIMQGLEHPFLVNLW 81
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
+ ++ D L G L L + H + + + + L +AL YL +
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD------YLQNQ- 134
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+IIHRD+K NILLDE+ H++DF +A +L E +TT +AGT Y+APE S +
Sbjct: 135 --RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITT-MAGTKPYMAPEMFSSRK 190
Query: 492 ATEKS---DVYSFGVLLLELVTGKRP 514
S D +S GV EL+ G+RP
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRI---DRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+G+G G V+++ G +++ + +Q+ REL++L +V G
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYGA 134
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGE-GQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ GSLD L + G +Q+L K+++ +GL YL K
Sbjct: 135 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH--K 187
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
I+HRD+K SNIL++ E + DFG++ L+D A+ GT Y++PE LQ +
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSV 244
Query: 495 KSDVYSFGVLLLELVTGKRPTDPTFVK 521
+SD++S G+ L+E+ G+ P P K
Sbjct: 245 QSDIWSMGLSLVEMAVGRYPIPPPDAK 271
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 136/286 (47%), Gaps = 31/286 (10%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGT----FAVKRIDRS-REGSDQVFERELEILGSIKHINLV 370
E+V+G+G FG V R + G A+K + E + F E I+G +H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L G +++ +++ G+LD FL + ++ L+ G A G+ YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEM 137
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFG--YLAPEY 486
+HRD+ + NIL++ NL VSDFGL++ L + + T+ + G + APE
Sbjct: 138 S---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 487 LQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545
+ + T SD +S+G+++ E+++ G+R P + +V+ N + ++ RL D
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGER---PYWDMSNQDVI---NAIEQDYRLPPPPD- 247
Query: 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPC 591
C ++ ++ C + + RP QV+ L++ + +P
Sbjct: 248 -CPT-------SLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPA 285
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRI---DRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+G+G G V+++ G +++ + +Q+ REL++L +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYGA 72
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGE-GQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ GSLD L + G +Q+L K+++ +GL YL K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH--K 125
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
I+HRD+K SNIL++ E + DFG++ L+D A+ GT Y++PE LQ +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSV 182
Query: 495 KSDVYSFGVLLLELVTGKRPTDPTFVKR 522
+SD++S G+ L+E+ G+ P P K
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRI---DRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+G+G G V+++ G +++ + +Q+ REL++L +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYGA 72
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGE-GQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ GSLD L + G +Q+L K+++ +GL YL K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH--K 125
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
I+HRD+K SNIL++ E + DFG++ L+D A+ GT Y++PE LQ +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSV 182
Query: 495 KSDVYSFGVLLLELVTGKRPTDPTFVK 521
+SD++S G+ L+E+ G+ P P K
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRI---DRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+G+G G V+++ G +++ + +Q+ REL++L +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYGA 72
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGE-GQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ GSLD L + G +Q+L K+++ +GL YL K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH--K 125
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
I+HRD+K SNIL++ E + DFG++ L+D A+ GT Y++PE LQ +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSV 182
Query: 495 KSDVYSFGVLLLELVTGKRPTDPTFVKR 522
+SD++S G+ L+E+ G+ P P K
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G FG V M+ + G AVK I + + Q F E ++ ++H NLV L G
Sbjct: 201 IGKGEFGDV--MLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 378 LPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
L ++ +Y++ GSL D+L G + +L LK +L + YL + +
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 311
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS 496
HRD+ + N+L+ E+ VSDFGL K E + + APE L+ + + KS
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 497 DVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVE 556
DV+SFG+LL E+ + R P L+DV+ + M+ +
Sbjct: 368 DVWSFGILLWEIYSFGRVPYPRI------------------PLKDVVPRVEKGYKMDAPD 409
Query: 557 ----AILEIAARCTDANPDDRPSMNQVLQLLEQ 585
A+ ++ C + RP+ Q+ + LE
Sbjct: 410 GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 30/282 (10%)
Query: 319 VGSGGFGTV----YRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNL 372
+G G FG V Y + G + ++ G +++E++IL ++ H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 373 RGYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG-QQLLNWSARLKIALGSARGLAYLHH 429
+G C K L+ +Y+ +GSL D+L H G QLL ++ ++ G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI------CEGMAYLHS 135
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG---TFGYLAPEY 486
IHR++ + N+LLD + + DFGLAK + + + G F Y APE
Sbjct: 136 Q---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APEC 191
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544
L+ + SDV+SFGV L EL+T + PT + L ++G + RL ++++
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT---KFLELIGIAQGQMTVLRLTELLE 248
Query: 545 K--RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
+ R D E + + C + RP+ ++ +L+
Sbjct: 249 RGERLPRPDKCPCE-VYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRI---DRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+G+G G V+++ G +++ + +Q+ REL++L +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYGA 72
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGE-GQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ GSLD L + G +Q+L K+++ +GL YL K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH--K 125
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
I+HRD+K SNIL++ E + DFG++ L+D A+ GT Y++PE LQ +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSV 182
Query: 495 KSDVYSFGVLLLELVTGKRPTDPTFVKR 522
+SD++S G+ L+E+ G+ P P K
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRI---DRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+G+G G V+++ G +++ + +Q+ REL++L +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYGA 72
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGE-GQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ GSLD L + G +Q+L K+++ +GL YL K
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH--K 125
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
I+HRD+K SNIL++ E + DFG++ L+D A+ GT Y++PE LQ +
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSV 182
Query: 495 KSDVYSFGVLLLELVTGKRPTDPTFVKR 522
+SD++S G+ L+E+ G+ P P K
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 30/282 (10%)
Query: 319 VGSGGFGTV----YRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNL 372
+G G FG V Y + G + ++ G +++E++IL ++ H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 373 RGYCRLPATK--LLIYDYLSMGSLDDFLHEHGEG-QQLLNWSARLKIALGSARGLAYLHH 429
+G C K L+ +Y+ +GSL D+L H G QLL ++ ++ G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI------CEGMAYLH- 134
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG---TFGYLAPEY 486
IHR++ + N+LLD + + DFGLAK + + + G F Y APE
Sbjct: 135 --AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APEC 191
Query: 487 LQSGRATEKSDVYSFGVLLLELVT--GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544
L+ + SDV+SFGV L EL+T + PT + L ++G + RL ++++
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT---KFLELIGIAQGQMTVLRLTELLE 248
Query: 545 K--RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
+ R D E + + C + RP+ ++ +L+
Sbjct: 249 RGERLPRPDKCPCE-VYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 29/267 (10%)
Query: 317 DVVGSGGFGTVY-RMVMNDCGTFAVK--RIDRSREGSDQV-FERELEILGSIKHINLVNL 372
+++G GG V+ + D AVK R D +R+ S + F RE + ++ H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 373 --RGYCRLPATKL--LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
G PA L ++ +Y+ +L D +H G + +++ + + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH 133
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA--GTFGYLAPEY 486
+ IIHRD+K +NI++ V DFG+A+ + D VT A GT YL+PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 487 LQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKR 546
+ +SDVYS G +L E++TG +P F + V + + ++E+ +
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG----EPPFTGDSPDSVAYQH--VREDPIPPSARHE 244
Query: 547 CADADMETVEAILEIAARCTDANPDDR 573
AD++ V +L+ A+ NP++R
Sbjct: 245 GLSADLDAV--VLKALAK----NPENR 265
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRI---DRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+G+G G V+++ G +++ + +Q+ REL++L +V G
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYGA 99
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGE-GQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ GSLD L + G +Q+L K+++ +GL YL K
Sbjct: 100 FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKH--K 152
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
I+HRD+K SNIL++ E + DFG++ L+D A+ GT Y++PE LQ +
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSV 209
Query: 495 KSDVYSFGVLLLELVTGKRPTDPTFVK 521
+SD++S G+ L+E+ G+ P P K
Sbjct: 210 QSDIWSMGLSLVEMAVGRYPIPPPDAK 236
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 65/127 (51%)
Query: 83 GGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLL 142
GG SP+ + L + N L G IP EI + L L L N + G IP +G+L
Sbjct: 621 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 680
Query: 143 FLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNLDL 202
L ILDLSSN L G IP ++ LT L ++LS N SG IP+ G F F+ N L
Sbjct: 681 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGL 740
Query: 203 CGRQVHK 209
CG + +
Sbjct: 741 CGYPLPR 747
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 60/110 (54%)
Query: 74 SINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGG 133
S++L + L G I S+G L KL+ L L N L G IP E+ L L L N L G
Sbjct: 422 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGE 481
Query: 134 IPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIP 183
IP+ + N L + LS+N L G IP +GRL +L L LS N FSG IP
Sbjct: 482 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 80/159 (50%), Gaps = 32/159 (20%)
Query: 74 SINLPYMQLGGIISPSIGRLDK--LQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQ 131
+++L G I P++ + K LQ L L N G IP ++NC+EL +L+L NYL
Sbjct: 372 TLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLS 431
Query: 132 GGIPANIGNL-------LFLTILD-----------------LSSNSLKGAIPSSLGRLTH 167
G IP+++G+L L+L +L+ L N L G IPS L T+
Sbjct: 432 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 491
Query: 168 LHYLNLSTNFFSGEIPDFG------ALSAFGNKSFIGNL 200
L++++LS N +GEIP + A+ N SF GN+
Sbjct: 492 LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 530
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 90 IGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149
+ R L+ L + N+ IP + +C+ L+ L + N L G I L +L++
Sbjct: 196 VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 254
Query: 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDF 185
SSN G IP L L YL+L+ N F+GEIPDF
Sbjct: 255 SSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDF 288
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 71 RVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITN-CTELRALYLRANY 129
++ +N+ Q G I P L LQ L+L +N G IP+ ++ C L L L N+
Sbjct: 248 ELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNH 305
Query: 130 LQGGIPANIGNLLFLTILDLSSNSLKGAIP-SSLGRLTHLHYLNLSTNFFSGEIPD 184
G +P G+ L L LSSN+ G +P +L ++ L L+LS N FSGE+P+
Sbjct: 306 FYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE 361
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANY 129
+ + ++ L + L G I + L ++L N L G IP I L L L N
Sbjct: 466 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNS 525
Query: 130 LQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGE 181
G IPA +G+ L LDL++N G IP+++ + + ++ NF +G+
Sbjct: 526 FSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG----KIAANFIAGK 573
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 61/140 (43%), Gaps = 31/140 (22%)
Query: 73 RSINLPYMQLG------GIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLR 126
R +NL ++ + GI P +G LQ L + N L G I+ CTEL+ L +
Sbjct: 198 RCVNLEFLDVSSNNFSTGI--PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNIS 255
Query: 127 ANYLQGGIP------------------ANIGNLL-----FLTILDLSSNSLKGAIPSSLG 163
+N G IP I + L LT LDLS N GA+P G
Sbjct: 256 SNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFG 315
Query: 164 RLTHLHYLNLSTNFFSGEIP 183
+ L L LS+N FSGE+P
Sbjct: 316 SCSLLESLALSSNNFSGELP 335
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 92/226 (40%), Gaps = 68/226 (30%)
Query: 33 LLEIKSSLNDSRNLLGNWQATEESPCKWTGISCHTHDQRVRSINLPYMQLG--------- 83
L+ K L D +NLL +W ++ ++PC + G++C D +V SI+L L
Sbjct: 17 LISFKDVLPD-KNLLPDW-SSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSS 72
Query: 84 --------------GIISPSIGRLD---KLQRLALHQNSLHGSIPN--EITNCTELRALY 124
I+ S+ L L L +NSL G + + +C+ L+ L
Sbjct: 73 LLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLN 132
Query: 125 LRANYL------QGGIPANIGNLLFLTILDLSSNSLKGA------IPSSLGRLTH----- 167
+ +N L GG+ N L +LDLS+NS+ GA + G L H
Sbjct: 133 VSSNTLDFPGKVSGGLKLNS-----LEVLDLSANSISGANVVGWVLSDGCGELKHLAISG 187
Query: 168 --------------LHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199
L +L++S+N FS IP G SA + GN
Sbjct: 188 NKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGN 233
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 84 GIISPSIGRLDKLQRLALHQNSLHGSIP-NEITNCTELRALYLRANYLQGGIPANIGNL- 141
G + P G L+ LAL N+ G +P + + L+ L L N G +P ++ NL
Sbjct: 308 GAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLS 367
Query: 142 LFLTILDLSSNSLKGAIPSSLGR--LTHLHYLNLSTNFFSGEIP 183
L LDLSSN+ G I +L + L L L N F+G+IP
Sbjct: 368 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIP 411
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 65/127 (51%)
Query: 83 GGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLL 142
GG SP+ + L + N L G IP EI + L L L N + G IP +G+L
Sbjct: 618 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 677
Query: 143 FLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNLDL 202
L ILDLSSN L G IP ++ LT L ++LS N SG IP+ G F F+ N L
Sbjct: 678 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGL 737
Query: 203 CGRQVHK 209
CG + +
Sbjct: 738 CGYPLPR 744
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 60/110 (54%)
Query: 74 SINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGG 133
S++L + L G I S+G L KL+ L L N L G IP E+ L L L N L G
Sbjct: 419 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGE 478
Query: 134 IPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIP 183
IP+ + N L + LS+N L G IP +GRL +L L LS N FSG IP
Sbjct: 479 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 80/159 (50%), Gaps = 32/159 (20%)
Query: 74 SINLPYMQLGGIISPSIGRLDK--LQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQ 131
+++L G I P++ + K LQ L L N G IP ++NC+EL +L+L NYL
Sbjct: 369 TLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLS 428
Query: 132 GGIPANIGNL-------LFLTILD-----------------LSSNSLKGAIPSSLGRLTH 167
G IP+++G+L L+L +L+ L N L G IPS L T+
Sbjct: 429 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 488
Query: 168 LHYLNLSTNFFSGEIPDFG------ALSAFGNKSFIGNL 200
L++++LS N +GEIP + A+ N SF GN+
Sbjct: 489 LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 527
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 90 IGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149
+ R L+ L + N+ IP + +C+ L+ L + N L G I L +L++
Sbjct: 193 VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 251
Query: 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDF 185
SSN G IP L L YL+L+ N F+GEIPDF
Sbjct: 252 SSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDF 285
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 71 RVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITN-CTELRALYLRANY 129
++ +N+ Q G I P L LQ L+L +N G IP+ ++ C L L L N+
Sbjct: 245 ELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNH 302
Query: 130 LQGGIPANIGNLLFLTILDLSSNSLKGAIP-SSLGRLTHLHYLNLSTNFFSGEIPD 184
G +P G+ L L LSSN+ G +P +L ++ L L+LS N FSGE+P+
Sbjct: 303 FYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE 358
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANY 129
+ + ++ L + L G I + L ++L N L G IP I L L L N
Sbjct: 463 KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNS 522
Query: 130 LQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGE 181
G IPA +G+ L LDL++N G IP+++ + + ++ NF +G+
Sbjct: 523 FSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG----KIAANFIAGK 570
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 61/140 (43%), Gaps = 31/140 (22%)
Query: 73 RSINLPYMQLG------GIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLR 126
R +NL ++ + GI P +G LQ L + N L G I+ CTEL+ L +
Sbjct: 195 RCVNLEFLDVSSNNFSTGI--PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNIS 252
Query: 127 ANYLQGGIP------------------ANIGNLL-----FLTILDLSSNSLKGAIPSSLG 163
+N G IP I + L LT LDLS N GA+P G
Sbjct: 253 SNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFG 312
Query: 164 RLTHLHYLNLSTNFFSGEIP 183
+ L L LS+N FSGE+P
Sbjct: 313 SCSLLESLALSSNNFSGELP 332
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 92/226 (40%), Gaps = 68/226 (30%)
Query: 33 LLEIKSSLNDSRNLLGNWQATEESPCKWTGISCHTHDQRVRSINLPYMQLG--------- 83
L+ K L D +NLL +W ++ ++PC + G++C D +V SI+L L
Sbjct: 14 LISFKDVLPD-KNLLPDW-SSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSS 69
Query: 84 --------------GIISPSIGRLD---KLQRLALHQNSLHGSIPN--EITNCTELRALY 124
I+ S+ L L L +NSL G + + +C+ L+ L
Sbjct: 70 LLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLN 129
Query: 125 LRANYL------QGGIPANIGNLLFLTILDLSSNSLKGA------IPSSLGRLTH----- 167
+ +N L GG+ N L +LDLS+NS+ GA + G L H
Sbjct: 130 VSSNTLDFPGKVSGGLKLNS-----LEVLDLSANSISGANVVGWVLSDGCGELKHLAISG 184
Query: 168 --------------LHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199
L +L++S+N FS IP G SA + GN
Sbjct: 185 NKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGN 230
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 84 GIISPSIGRLDKLQRLALHQNSLHGSIP-NEITNCTELRALYLRANYLQGGIPANIGNL- 141
G + P G L+ LAL N+ G +P + + L+ L L N G +P ++ NL
Sbjct: 305 GAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLS 364
Query: 142 LFLTILDLSSNSLKGAIPSSLGR--LTHLHYLNLSTNFFSGEIP 183
L LDLSSN+ G I +L + L L L N F+G+IP
Sbjct: 365 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIP 408
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 317 DVVGSGGFGTVY-RMVMNDCGTFAVK--RIDRSREGSDQV-FERELEILGSIKHINLVNL 372
+++G GG V+ + D AVK R D +R+ S + F RE + ++ H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 373 --RGYCRLPATKL--LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
G PA L ++ +Y+ +L D +H G + +++ + + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH 133
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEY 486
+ IIHRD+K +NIL+ V DFG+A+ + D V T V GT YL+PE
Sbjct: 134 QNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 487 LQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ +SDVYS G +L E++TG+ P
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSI 364
LE D +G G FG VY + F A+K + ++ + G + RE+EI +
Sbjct: 11 LEDFDIGRPLGKGKFGNVY-LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL 69
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--AR 422
+H N++ L GY LI +Y +G++ + E Q+L + + + A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTV------YRELQKLSRFDEQRTATYITELAN 123
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYL 482
L+Y H ++IHRDIK N+LL N E ++DFG + V + + GT YL
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYL 177
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRPTD 516
PE ++ EK D++S GVL E + G P +
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 34/280 (12%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRID-RSREGSDQVFERELEILG 362
E+ KLE +G G FG V++ + N A+K ID E + ++E+ +L
Sbjct: 23 ELFTKLER------IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLS 76
Query: 363 SIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA 421
+ G L +KL +I +YL GS D L + + LK L
Sbjct: 77 QCDSSYVTKYYG-SYLKGSKLWIIMEYLGGGSALDLLRAGPFDE--FQIATMLKEIL--- 130
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
+GL YLH + K IHRDIK++N+LL E + ++DFG+A L D + T V F +
Sbjct: 131 KGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF-W 186
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541
+APE +Q K+D++S G+ +EL G+ P R L L+ +N
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL-------FLIPKNNPPT 239
Query: 542 VIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581
++ + ++ E C + +P RP+ ++L+
Sbjct: 240 LVG--------DFTKSFKEFIDACLNKDPSFRPTAKELLK 271
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 317 DVVGSGGFGTVY-RMVMNDCGTFAVK--RIDRSREGSDQV-FERELEILGSIKHINLVNL 372
+++G GG V+ + D AVK R D +R+ S + F RE + ++ H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 373 --RGYCRLPATKL--LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
G PA L ++ +Y+ +L D +H G + +++ + + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH 133
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA--GTFGYLAPEY 486
+ IIHRD+K +NI++ V DFG+A+ + D VT A GT YL+PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 487 LQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ +SDVYS G +L E++TG+ P
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRID-RSREGSDQVFERELEILG 362
E+ KLE +G G FG V++ + N A+K ID E + ++E+ +L
Sbjct: 27 ELFTKLEK------IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 80
Query: 363 SIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA 421
+ G L TKL +I +YL GS D L E G L+ + I
Sbjct: 81 QCDSPYVTKYYG-SYLKDTKLWIIMEYLGGGSALDLL-EPGP----LDETQIATILREIL 134
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
+GL YLH + K IHRDIK++N+LL E+ E ++DFG+A L D + T V F +
Sbjct: 135 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-W 190
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+APE ++ K+D++S G+ +EL G+ P
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 138/306 (45%), Gaps = 61/306 (19%)
Query: 315 EEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
E +++GSGGFG V++ D T+ ++R+ + E + ERE++ L + H+N+V+
Sbjct: 16 EIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIVHYN 71
Query: 374 G----YCRLPATK-------------------------LLIYDYLSMGSLDDFLHEHGEG 404
G + P T + ++ G+L+ ++ E G
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRG 130
Query: 405 QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464
++L A L++ +G+ Y+H K+IHRD+K SNI L + + + DFGL L
Sbjct: 131 EKLDKVLA-LELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGL 524
++ T GT Y++PE + S ++ D+Y+ G++L EL+ D F
Sbjct: 187 KNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAF----- 236
Query: 525 NVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
T L++ + D+ DK+ E L + P+DRP+ +++L+ L
Sbjct: 237 -ETSKFFTDLRDGIISDIFDKK---------EKTL--LQKLLSKKPEDRPNTSEILRTLT 284
Query: 585 QEVMSP 590
SP
Sbjct: 285 VWKKSP 290
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 319 VGSGGFGTVYR------MVMNDCGTFAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG V++ + AVK + Q F+RE ++ + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE--------------------HGEGQQLLNWS 411
L G C + L+++Y++ G L++FL G L+ +
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 412 ARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAH- 470
+L IA A G+AYL K +HRD+ + N L+ EN+ ++DFGL++ + + +
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 471 VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT 510
A ++ PE + R T +SDV+++GV+L E+ +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRI---DRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+G+G G V ++ G +++ + +Q+ REL++L +V G
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQII-RELQVLHECNSPYIVGFYGA 82
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGE-GQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ GSLD L E +++L K+++ RGLAYL +
Sbjct: 83 FYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLAYLREKH--Q 135
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
I+HRD+K SNIL++ E + DFG++ L+D A+ GT Y+APE LQ +
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMAPERLQGTHYSV 192
Query: 495 KSDVYSFGVLLLELVTGKRPTDPTFVK 521
+SD++S G+ L+EL G+ P P K
Sbjct: 193 QSDIWSMGLSLVELAVGRYPIPPPDAK 219
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRID-RSREGSDQVFERELEILG 362
E+ KLE +G G FG V++ + N A+K ID E + ++E+ +L
Sbjct: 7 ELFTKLEK------IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 363 SIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA 421
+ G L TKL +I +YL GS D L E G L+ + I
Sbjct: 61 QCDSPYVTKYYG-SYLKDTKLWIIMEYLGGGSALDLL-EPGP----LDETQIATILREIL 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
+GL YLH + K IHRDIK++N+LL E+ E ++DFG+A L D + T V F +
Sbjct: 115 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-W 170
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+APE ++ K+D++S G+ +EL G+ P
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 20/216 (9%)
Query: 317 DVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV---FERELEILGSIKHINLVNL 372
D +G G FG V G AVK ++R + S V +RE++ L +H +++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
P ++ +Y+S G L D++ +HG +++ + RL + SA + H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM--EARRLFQQILSAVDYCHRH---- 130
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR- 491
++HRD+K N+LLD ++ ++DFGL+ ++ D E + G+ Y APE + SGR
Sbjct: 131 -MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS--CGSPNYAAPEVI-SGRL 186
Query: 492 -ATEKSDVYSFGVLLLELVTGKRPTD----PTFVKR 522
A + D++S GV+L L+ G P D PT K+
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 114/232 (49%), Gaps = 23/232 (9%)
Query: 297 GDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-------TFAVKRIDRSREG 349
G P + I K L + V+GSG FGTVY+ + G V R + S +
Sbjct: 3 GAAPNQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA 62
Query: 350 SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQ 406
+ ++ + E ++ + + L G C L +T L+ + G L D + E+ Q
Sbjct: 63 NKEILD-EAYVMAGVGSPYVSRLLGIC-LTSTVQLVTQLMPYGCLLDHVRENRGRLGSQD 120
Query: 407 LLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-V 465
LLNW ++ A+G++YL +++HRD+ + N+L+ ++DFGLA+LL +
Sbjct: 121 LLNWCMQI------AKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 171
Query: 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
DE + ++A E + R T +SDV+S+GV + EL+T G +P D
Sbjct: 172 DETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 304 CEIIEKLEALDEEDVV---GSGGFGTVY--RMVMNDCGTFAVKRIDRS---REGSDQVFE 355
E+ ++ +D+ D+V G G FG VY R N A+K + +S +EG +
Sbjct: 4 AEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKF-IMALKVLFKSQLEKEGVEHQLR 62
Query: 356 RELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLK 415
RE+EI ++H N++ + Y L+ ++ G L L +HG + SA
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE--QRSATFM 120
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVV 475
L A L Y H K+IHRDIK N+L+ E ++DFG + V + +
Sbjct: 121 EELADA--LHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXM 172
Query: 476 AGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTD 516
GT YL PE ++ EK D++ GVL E + G P D
Sbjct: 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 34/269 (12%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRG 374
+G GGF + + D FA K + +S + + E+ I S+ H ++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL---KIALGSARGLAYLHHDC 431
+ ++ L + L H + L AR +I LG YLH +
Sbjct: 83 FFE---DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN- 134
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRD+K N+ L+E+LE + DFGLA V+ + V+ GT Y+APE L
Sbjct: 135 --RVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKVLCGTPNYIAPEVLSKKG 191
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
+ + DV+S G ++ L+ GK P + + +K T L+ + E I K
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETSCLK---------ETYLRIKKNEYSIPKHINPVA 242
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVL 580
++ +L+ +P RP++N++L
Sbjct: 243 ASLIQKMLQ-------TDPTARPTINELL 264
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 34/269 (12%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRG 374
+G GGF + + D FA K + +S + + E+ I S+ H ++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL---KIALGSARGLAYLHHDC 431
+ ++ L + L H + L AR +I LG YLH +
Sbjct: 107 FFE---DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN- 158
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRD+K N+ L+E+LE + DFGLA V+ + V+ GT Y+APE L
Sbjct: 159 --RVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKVLCGTPNYIAPEVLSKKG 215
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
+ + DV+S G ++ L+ GK P + + +K T L+ + E I K
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETSCLK---------ETYLRIKKNEYSIPKHINPVA 266
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVL 580
++ +L+ +P RP++N++L
Sbjct: 267 ASLIQKMLQ-------TDPTARPTINELL 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 34/269 (12%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRG 374
+G GGF + + D FA K + +S + + E+ I S+ H ++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL---KIALGSARGLAYLHHDC 431
+ ++ L + L H + L AR +I LG YLH +
Sbjct: 109 FFE---DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN- 160
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRD+K N+ L+E+LE + DFGLA V+ + V+ GT Y+APE L
Sbjct: 161 --RVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKVLCGTPNYIAPEVLSKKG 217
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
+ + DV+S G ++ L+ GK P + + +K T L+ + E I K
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETSCLK---------ETYLRIKKNEYSIPKHINPVA 268
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVL 580
++ +L+ +P RP++N++L
Sbjct: 269 ASLIQKMLQ-------TDPTARPTINELL 290
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 19/243 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G GTVY + G A+++++ ++ ++ E+ ++ K+ N+VN
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 378 LPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
+ ++ +YL+ GSL D + E EGQ +A + L + L +LH + ++
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQ----IAAVCRECL---QALEFLHSN---QV 137
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRDIKS NILL + ++DFG + E++ +T+V GT ++APE + K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPK 196
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNT--LLKENRLEDVID---KRCADA 550
D++S G++ +E++ G+ P R L ++ T L +L + RC D
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDM 256
Query: 551 DME 553
D+E
Sbjct: 257 DVE 259
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRL 378
+G+G FG V A+K I D+ E E +++ ++ H LV L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGVCTK 74
Query: 379 PATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
+I +Y++ G L ++L E + QQLL ++ + YL +
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLE---SKQF 125
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAPEYLQSGRAT 493
+HRD+ + N L+++ VSDFGL++ ++D+E T+ V F + PE L + +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 494 EKSDVYSFGVLLLELVT-GKRPTD 516
KSD+++FGVL+ E+ + GK P +
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 318 VVGSGGFGTVY---RMVMNDCG-TFAVKRIDRSR-EGSDQVFER-ELEILGSIKHINLVN 371
V+G G FG V+ ++ D G +A+K + ++ + D+V + E +IL + H +V
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS-ARGLAYLHHD 430
L + LI D+L G L L ++++ +K L A GL +LH
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALGLDHLH-- 147
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
II+RD+K NILLDE ++DFGL+K +D E + GT Y+APE +
Sbjct: 148 -SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMAPEVVNRQ 205
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
+ +D +S+GVL+ E++TG P
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 319 VGSGGFGTVYRMVMNDCGT------FAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G+G FG V G AVK + + + + EL+I+ + +H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKIAL 418
NL G C L+I +Y G L +FL E + LL++S+++
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV---- 161
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG- 477
A+G+A+L C IHRD+ + N+LL + DFGLA+ ++++ ++ A
Sbjct: 162 --AQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 478 TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537
++APE + T +SDV+S+G+LL E+ + GLN + L+
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-----------LGLN--PYPGILVNSK 263
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ V D + I I C P RP+ Q+ L+++
Sbjct: 264 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 313
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRL 378
+G+G FG V A+K I D+ E E +++ ++ H LV L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGVCTK 70
Query: 379 PATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
+I +Y++ G L ++L E + QQLL ++ + YL +
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLE---SKQF 121
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAPEYLQSGRAT 493
+HRD+ + N L+++ VSDFGL++ ++D+E T+ V F + PE L + +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 494 EKSDVYSFGVLLLELVT-GKRPTD 516
KSD+++FGVL+ E+ + GK P +
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRL 378
+G+G FG V A+K I D+ E E +++ ++ H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGVCTK 75
Query: 379 PATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
+I +Y++ G L ++L E + QQLL ++ + YL +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLE---SKQF 126
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAPEYLQSGRAT 493
+HRD+ + N L+++ VSDFGL++ ++D+E T+ V F + PE L + +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 494 EKSDVYSFGVLLLELVT-GKRPTD 516
KSD+++FGVL+ E+ + GK P +
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 22/223 (9%)
Query: 301 YPSCEIIEK-LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELE 359
Y S EI K L L E +G+G FG V A+K I D+ E E +
Sbjct: 16 YGSWEIDPKDLTFLKE---LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAK 71
Query: 360 ILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKI 416
++ ++ H LV L G C +I +Y++ G L ++L E + QQLL ++
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EM 125
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
+ YL + +HRD+ + N L+++ VSDFGL++ ++D+E T+ V
Sbjct: 126 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVG 180
Query: 477 GTFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516
F + PE L + + KSD+++FGVL+ E+ + GK P +
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 20/216 (9%)
Query: 308 EKLEALDEEDV-----VGSGGFGTVYRMVMNDCGTFAVKRI---DRSREGSDQVFERELE 359
+K+ L ++D +G+G G V+++ G +++ + +Q+ REL+
Sbjct: 17 QKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-RELQ 75
Query: 360 ILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE-GQQLLNWSARLKIAL 418
+L +V G + +++ GSLD L + G +Q+L K+++
Sbjct: 76 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSI 130
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
+GL YL KI+HRD+K SNIL++ E + DFG++ L+D A+ GT
Sbjct: 131 AVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGT 185
Query: 479 FGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
Y++PE LQ + +SD++S G+ L+E+ G+ P
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRL 378
+G+G FG V A+K I D+ E E +++ ++ H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGVCTK 90
Query: 379 PATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
+I +Y++ G L ++L E + QQLL ++ + YL +
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLE---SKQF 141
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG--YLAPEYLQSGRAT 493
+HRD+ + N L+++ VSDFGL++ ++D+E T+ V F + PE L + +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE--TSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 494 EKSDVYSFGVLLLELVT-GKRPTD 516
KSD+++FGVL+ E+ + GK P +
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 20/216 (9%)
Query: 317 DVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV---FERELEILGSIKHINLVNL 372
D +G G FG V G AVK ++R + S V RE++ L +H +++ L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
P+ ++ +Y+S G L D++ ++G + S RL + S G+ Y H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDE--KESRRLFQQILS--GVDYCHRHM- 136
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR- 491
++HRD+K N+LLD ++ ++DFGL+ ++ D E G+ Y APE + SGR
Sbjct: 137 --VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPNYAAPEVI-SGRL 191
Query: 492 -ATEKSDVYSFGVLLLELVTGKRPTD----PTFVKR 522
A + D++S GV+L L+ G P D PT K+
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKK 227
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 311 EALDEEDVVGSGGFGTVYRMV---MNDCGT---FAVKRIDRSREGSD-QVFERELEILGS 363
E L+ V+GSG FG V ++ G AVK + + S+ + EL+++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 364 I-KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH-------------------EHGE 403
+ H N+VNL G C L LI++Y G L ++L E E
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 404 GQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463
+L + L A A+G+ +L C +HRD+ + N+L+ + DFGLA+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSC---VHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 464 LVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT------GKRPTD 516
++ + +V A ++APE L G T KSDV+S+G+LL E+ + P D
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281
Query: 517 PTFVK 521
F K
Sbjct: 282 ANFYK 286
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRID-RSREGSDQVFERELEILG 362
E+ KLE +G G FG V++ + N A+K ID E + ++E+ +L
Sbjct: 22 ELFTKLEK------IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 75
Query: 363 SIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA 421
+ G L TKL +I +YL GS D L E G L+ + I
Sbjct: 76 QCDSPYVTKYYG-SYLKDTKLWIIMEYLGGGSALDLL-EPGP----LDETQIATILREIL 129
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
+GL YLH + K IHRDIK++N+LL E+ E ++DFG+A L D + V F +
Sbjct: 130 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-W 185
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+APE ++ K+D++S G+ +EL G+ P
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRL 378
+G+G FG V A+K I D+ E E +++ ++ H LV L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGVCTK 81
Query: 379 PATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
+I +Y++ G L ++L E + QQLL ++ + YL +
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLE---SKQF 132
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAPEYLQSGRAT 493
+HRD+ + N L+++ VSDFGL++ ++D+E T+ V F + PE L + +
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 494 EKSDVYSFGVLLLELVT-GKRPTD 516
KSD+++FGVL+ E+ + GK P +
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 18/212 (8%)
Query: 306 IIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRI--DRSREGSDQVFERELEILGS 363
++EK + L++ VG G +G VY+ + A+KRI D EG RE+ +L
Sbjct: 19 LMEKYQKLEK---VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 364 IKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA-R 422
+ H N+V+L L+++++ L L E+ G Q +++KI L R
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQ----DSQIKIYLYQLLR 130
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFGY 481
G+A+ H +I+HRD+K N+L++ + ++DFGLA+ + ++ VV T Y
Sbjct: 131 GVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWY 185
Query: 482 LAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
AP+ L + S D++S G + E++TGK
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 18/212 (8%)
Query: 306 IIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRI--DRSREGSDQVFERELEILGS 363
++EK + L++ VG G +G VY+ + A+KRI D EG RE+ +L
Sbjct: 19 LMEKYQKLEK---VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 364 IKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA-R 422
+ H N+V+L L+++++ L L E+ G Q +++KI L R
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQ----DSQIKIYLYQLLR 130
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFGY 481
G+A+ H +I+HRD+K N+L++ + ++DFGLA+ + ++ VV T Y
Sbjct: 131 GVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWY 185
Query: 482 LAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
AP+ L + S D++S G + E++TGK
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 18/205 (8%)
Query: 318 VVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQ-----VFERELEILGSIKHINLVN 371
++G GGFG VY D G +A+K +D+ R Q + ER + L S +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 372 LRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
Y KL I D ++ G L L +HG + +I LG L ++H+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNR 311
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+++RD+K +NILLDE+ +SD GLA ++ H + GT GY+APE LQ G
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKG 365
Query: 491 RATEKS-DVYSFGVLLLELVTGKRP 514
A + S D +S G +L +L+ G P
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 18/205 (8%)
Query: 318 VVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQ-----VFERELEILGSIKHINLVN 371
++G GGFG VY D G +A+K +D+ R Q + ER + L S +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 372 LRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
Y KL I D ++ G L L +HG + +I LG L ++H+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNR 311
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+++RD+K +NILLDE+ +SD GLA ++ H + GT GY+APE LQ G
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKG 365
Query: 491 RATEKS-DVYSFGVLLLELVTGKRP 514
A + S D +S G +L +L+ G P
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 18/205 (8%)
Query: 318 VVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQ-----VFERELEILGSIKHINLVN 371
++G GGFG VY D G +A+K +D+ R Q + ER + L S +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 372 LRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
Y KL I D ++ G L L +HG + +I LG L ++H+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNR 311
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+++RD+K +NILLDE+ +SD GLA ++ H + GT GY+APE LQ G
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKG 365
Query: 491 RATEKS-DVYSFGVLLLELVTGKRP 514
A + S D +S G +L +L+ G P
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 304 CEIIEKLEALDEEDV---VGSGGFGTVY--RMVMNDCGTFAVKRIDRS---REGSDQVFE 355
E+ ++ +D+ D+ +G G FG VY R N A+K + +S +EG +
Sbjct: 5 AEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKF-IMALKVLFKSQLEKEGVEHQLR 63
Query: 356 RELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLK 415
RE+EI ++H N++ + Y L+ ++ G L L +HG + SA
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE--QRSATFM 121
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVV 475
L A L Y H K+IHRDIK N+L+ E ++DFG + V + +
Sbjct: 122 EELADA--LHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXM 173
Query: 476 AGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTD 516
GT YL PE ++ EK D++ GVL E + G P D
Sbjct: 174 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 29/220 (13%)
Query: 317 DVVGSGGFGTVYR-MVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNL--- 372
++ G FG V++ +MND F +I ++ ERE+ +KH NL+
Sbjct: 21 EIKARGRFGCVWKAQLMND---FVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAA 77
Query: 373 --RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
RG L LI + GSL D+L ++ W+ +A +RGL+YLH D
Sbjct: 78 EKRG-SNLEVELWLITAFHDKGSLTDYLK-----GNIITWNELCHVAETMSRGLSYLHED 131
Query: 431 C--C------PKIIHRDIKSSNILLDENLEPHVSDFGLA-KLLVDEEAHVTTVVAGTFGY 481
C P I HRD KS N+LL +L ++DFGLA + + T GT Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 482 LAPEYLQSGRATEKS-----DVYSFGVLLLELVTGKRPTD 516
+APE L+ ++ D+Y+ G++L ELV+ + D
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 304 CEIIEKLEALDEEDV---VGSGGFGTVY--RMVMNDCGTFAVKRIDRS---REGSDQVFE 355
E+ ++ +D+ D+ +G G FG VY R N A+K + +S +EG +
Sbjct: 4 AEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKF-IMALKVLFKSQLEKEGVEHQLR 62
Query: 356 RELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLK 415
RE+EI ++H N++ + Y L+ ++ G L L +HG + SA
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE--QRSATFM 120
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVV 475
L A L Y H K+IHRDIK N+L+ E ++DFG + V + +
Sbjct: 121 EELADA--LHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXM 172
Query: 476 AGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTD 516
GT YL PE ++ EK D++ GVL E + G P D
Sbjct: 173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 18/205 (8%)
Query: 318 VVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQ-----VFERELEILGSIKHINLVN 371
++G GGFG VY D G +A+K +D+ R Q + ER + L S +
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 372 LRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
Y KL I D ++ G L L +HG + +I LG L ++H+
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNR 310
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+++RD+K +NILLDE+ +SD GLA ++ H + GT GY+APE LQ G
Sbjct: 311 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKG 364
Query: 491 RATEKS-DVYSFGVLLLELVTGKRP 514
A + S D +S G +L +L+ G P
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 34/269 (12%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRG 374
+G GGF + + D FA K + +S + + E+ I S+ H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL---KIALGSARGLAYLHHDC 431
+ ++ L + L H + L AR +I LG YLH +
Sbjct: 85 FFE---DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN- 136
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRD+K N+ L+E+LE + DFGLA V+ + + GT Y+APE L
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
+ + DV+S G ++ L+ GK P + + +K T L+ + E I K
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETSCLK---------ETYLRIKKNEYSIPKHINPVA 244
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVL 580
++ +L+ +P RP++N++L
Sbjct: 245 ASLIQKMLQ-------TDPTARPTINELL 266
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRID-RSREGSDQVFERELEILG 362
E+ KLE +G G FG V++ + N A+K ID E + ++E+ +L
Sbjct: 7 ELFTKLEK------IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 363 SIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA 421
+ G L TKL +I +YL GS D L E G L+ + I
Sbjct: 61 QCDSPYVTKYYG-SYLKDTKLWIIMEYLGGGSALDLL-EPGP----LDETQIATILREIL 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
+GL YLH + K IHRDIK++N+LL E+ E ++DFG+A L D + V F +
Sbjct: 115 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-W 170
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+APE ++ K+D++S G+ +EL G+ P
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 317 DVVGSGGFGTVY---RMVMNDCGTFAVKRIDRSREGSDQV-FERELEILGSIKHINLVNL 372
+++G GG V+ + ++ V R D +R+ S + F RE + ++ H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 373 --RGYCRLPATKL--LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
G PA L ++ +Y+ +L D +H G + +++ + + L + H
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH 133
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA--GTFGYLAPEY 486
+ IIHRD+K +NI++ V DFG+A+ + D VT A GT YL+PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 487 LQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ +SDVYS G +L E++TG+ P
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 10/205 (4%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINL 369
E D + +G G +G+VY+ + + G A+K++ E Q +E+ I+ ++
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV--PVESDLQEIIKEISIMQQCDSPHV 86
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
V G ++ +Y GS+ D + + L I + +GL YLH
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLHF 143
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+ IHRDIK+ NILL+ ++DFG+A L D A V+ GT ++APE +Q
Sbjct: 144 ---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-GTPFWMAPEVIQE 199
Query: 490 GRATEKSDVYSFGVLLLELVTGKRP 514
+D++S G+ +E+ GK P
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 317 DVVGSGGFGTVY---RMVMNDCGTFAVKRIDRSREGSDQV-FERELEILGSIKHINLVNL 372
+++G GG V+ + ++ V R D +R+ S + F RE + ++ H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 373 --RGYCRLPATKL--LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
G PA L ++ +Y+ +L D +H G + +++ + + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH 133
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA--GTFGYLAPEY 486
+ IIHRD+K +NI++ V DFG+A+ + D VT A GT YL+PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 487 LQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ +SDVYS G +L E++TG+ P
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 43/291 (14%)
Query: 318 VVGSGGFGTVYRMVMNDCGT------FAVKRIDRSREGSD-QVFERELEILGSI-KHINL 369
+G+G FG V G AVK + + + + EL+I+ + +H N+
Sbjct: 53 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKIA 417
VNL G C L+I +Y G L +FL E + LL++S+++
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV--- 169
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
A+G+A+L C IHRD+ + N+LL + DFGLA+ ++++ ++ A
Sbjct: 170 ---AQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 223
Query: 478 -TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE 536
++APE + T +SDV+S+G+LL E+ + GLN + L+
Sbjct: 224 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-----------LGLN--PYPGILVNS 270
Query: 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ V D + I I C P RP+ Q+ L+++
Sbjct: 271 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 321
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 34/269 (12%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRG 374
+G GGF + + D FA K + +S + + E+ I S+ H ++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL---KIALGSARGLAYLHHDC 431
+ ++ L + L H + L AR +I LG YLH +
Sbjct: 89 FFE---DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN- 140
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRD+K N+ L+E+LE + DFGLA V+ + + GT Y+APE L
Sbjct: 141 --RVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKTLCGTPNYIAPEVLSKKG 197
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
+ + DV+S G ++ L+ GK P + + +K T L+ + E I K
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFETSCLK---------ETYLRIKKNEYSIPKHINPVA 248
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVL 580
++ +L+ +P RP++N++L
Sbjct: 249 ASLIQKMLQ-------TDPTARPTINELL 270
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 34/269 (12%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRG 374
+G GGF + + D FA K + +S + + E+ I S+ H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL---KIALGSARGLAYLHHDC 431
+ ++ L + L H + L AR +I LG YLH +
Sbjct: 85 FFE---DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN- 136
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
++IHRD+K N+ L+E+LE + DFGLA V+ + + GT Y+APE L
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLAT-KVEYDGERKKTLCGTPNYIAPEVLSKKG 193
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
+ + DV+S G ++ L+ GK P + + +K T L+ + E I K
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETSCLK---------ETYLRIKKNEYSIPKHINPVA 244
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVL 580
++ +L+ +P RP++N++L
Sbjct: 245 ASLIQKMLQ-------TDPTARPTINELL 266
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRL 378
+G+G FG V A+K I D+ E E +++ ++ H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGVCTK 75
Query: 379 PATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
+I +Y++ G L ++L E + QQLL ++ + YL +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLE---SKQF 126
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
+HRD+ + N L+++ VSDFGL++ ++D+E + + PE L + + K
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 496 SDVYSFGVLLLELVT-GKRPTD 516
SD+++FGVL+ E+ + GK P +
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYE 208
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 129/296 (43%), Gaps = 47/296 (15%)
Query: 319 VGSGGFGTVYRM----VMNDCG--TFAVKRIDRSREGSD-QVFERELEILGSIKHINLVN 371
+G G FG V + + G T AVK + + S+ + E +L + H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEH---GEG-----------------QQLLNWS 411
L G C LLI +Y GSL FL E G G ++ L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 412 ARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV 471
+ A ++G+ YL K++HRD+ + NIL+ E + +SDFGL++ + +E+++V
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 472 TTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGW 529
++A E L T +SDV+SFGVLL E+VT G P +R N
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN---- 263
Query: 530 MNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
LLK + D C+ E + + +C PD RP + + LE+
Sbjct: 264 ---LLKTGHRMERPDN-CS-------EEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 132/278 (47%), Gaps = 20/278 (7%)
Query: 319 VGSGGFGTV----YRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNL 372
+G G FG V Y ++ G + + G + + ++E+EIL ++ H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 373 RGYCRLPATK--LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+G C LI ++L GSL ++L ++ + +N +LK A+ +G+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV---VAGTFGYLAPEYL 487
+ +HRD+ + N+L++ + + DFGL K + ++ T + F Y APE L
Sbjct: 134 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK-R 546
+ SDV+SFGV L EL+T +D + + L ++G + + RL + + + +
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT-YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 248
Query: 547 CADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
+ + ++ +C + P +R S +++ E
Sbjct: 249 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 286
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 317 DVVGSGGFGTVY---RMVMNDCGTFAVKRIDRSREGSDQV-FERELEILGSIKHINLVNL 372
+++G GG V+ + ++ V R D +R+ S + F RE + ++ H +V +
Sbjct: 35 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 373 --RGYCRLPATKL--LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
G PA L ++ +Y+ +L D +H G + +++ + + L + H
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSH 150
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA--GTFGYLAPEY 486
+ IIHRD+K +NI++ V DFG+A+ + D VT A GT YL+PE
Sbjct: 151 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 487 LQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ +SDVYS G +L E++TG+ P
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 318 VVGSGGFGTVYRMVMNDCGT-----FAVKRIDRSR-EGSDQVFER-ELEILGSIKHINLV 370
V+G G FG V+ +V G+ +A+K + ++ + D+V + E +IL + H +V
Sbjct: 32 VLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS-ARGLAYLHH 429
L + LI D+L G L L ++++ +K L A L +LH
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALALDHLH- 144
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
II+RD+K NILLDE ++DFGL+K +D E + GT Y+APE +
Sbjct: 145 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-CGTVEYMAPEVVNR 201
Query: 490 GRATEKSDVYSFGVLLLELVTGKRP 514
T+ +D +SFGVL+ E++TG P
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 318 VVGSGGFGTVYRMVMNDCGT-----FAVKRIDRSR-EGSDQVFER-ELEILGSIKHINLV 370
V+G G FG V+ +V G+ +A+K + ++ + D+V + E +IL + H +V
Sbjct: 31 VLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS-ARGLAYLHH 429
L + LI D+L G L L ++++ +K L A L +LH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALALDHLH- 143
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
II+RD+K NILLDE ++DFGL+K +D E + GT Y+APE +
Sbjct: 144 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-CGTVEYMAPEVVNR 200
Query: 490 GRATEKSDVYSFGVLLLELVTGKRP 514
T+ +D +SFGVL+ E++TG P
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 103/224 (45%), Gaps = 34/224 (15%)
Query: 308 EKLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQ--------VFEREL 358
E L+ L E +G G +G+V +MV G AVKRI + + +Q V R
Sbjct: 22 EDLKDLGE---IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS 78
Query: 359 EILGSIKHINLVNLRGYC----RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARL 414
+ ++ + G C L +T + LDD + E G
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG---------- 128
Query: 415 KIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV 474
KI L + + L +L + KIIHRDIK SNILLD + + DFG++ LVD A T
Sbjct: 129 KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK--TR 184
Query: 475 VAGTFGYLAPEYLQSGRATE----KSDVYSFGVLLLELVTGKRP 514
AG Y+APE + + + +SDV+S G+ L EL TG+ P
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 35/298 (11%)
Query: 307 IEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGS--DQVFERELEILGS 363
+ +E + +VG G +G V + D G A+K+ S + ++ RE+++L
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 364 IKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDF-LHEHGEGQQLLNWSARLKIALGSAR 422
++H NLVNL C+ L+++++ LDD L +G L++ K
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIIN 135
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYL 482
G+ + H IIHRDIK NIL+ ++ + DFG A+ L V T Y
Sbjct: 136 GIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA-APGEVYDDEVATRWYR 191
Query: 483 APEYL----QSGRATEKSDVYSFGVLLLELVTGKR--PTDPTFVKRGL------NVVGWM 530
APE L + G+A DV++ G L+ E+ G+ P D + N++
Sbjct: 192 APELLVGDVKYGKAV---DVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH 248
Query: 531 NTLLKEN------RLEDVIDKRCADADMETV-EAILEIAARCTDANPDDRPSMNQVLQ 581
L +N RL ++ ++ + + E ++++A +C +PD RP ++L
Sbjct: 249 QELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 132/278 (47%), Gaps = 20/278 (7%)
Query: 319 VGSGGFGTV----YRMVMNDCGTFAVKRIDRSREGSDQV--FERELEILGSIKHINLVNL 372
+G G FG V Y ++ G + + G + + ++E+EIL ++ H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 373 RGYCRLPATK--LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+G C LI ++L GSL ++L ++ + +N +LK A+ +G+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV---VAGTFGYLAPEYL 487
+ +HRD+ + N+L++ + + DFGL K + ++ T + F Y APE L
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK-R 546
+ SDV+SFGV L EL+T +D + + L ++G + + RL + + + +
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT-YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260
Query: 547 CADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
+ + ++ +C + P +R S +++ E
Sbjct: 261 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 121/269 (44%), Gaps = 30/269 (11%)
Query: 317 DVVGSGGFGTVYRMVMNDCG-TFAVKRID-RSREGSDQVFERELEILGSIKHINLVNLRG 374
D +G G FG VY+ + N A+K ID E + ++E+ +L + G
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 375 YCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
L +TKL +I +YL GS D L L + I +GL YLH +
Sbjct: 85 -SYLKSTKLWIIMEYLGGGSALDLLKPGP-----LEETYIATILREILKGLDYLHSE--- 135
Query: 434 KIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
+ IHRDIK++N+LL E + ++DFG+A L D + V F ++APE ++
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF-WMAPEVIKQSAYD 194
Query: 494 EKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADA-DM 552
K+D++S G+ +EL G+ P N+ L R+ +I K +
Sbjct: 195 FKADIWSLGITAIELAKGEPP----------------NSDLHPMRVLFLIPKNSPPTLEG 238
Query: 553 ETVEAILEIAARCTDANPDDRPSMNQVLQ 581
+ + E C + +P RP+ ++L+
Sbjct: 239 QHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G GTVY + G A+++++ ++ ++ E+ ++ K+ N+VN
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 378 LPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
+ ++ +YL+ GSL D + E EGQ +A + L + L +LH + ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQ----IAAVCRECL---QALEFLHSN---QV 138
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHR+IKS NILL + ++DFG + E++ +T+V GT ++APE + K
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPK 197
Query: 496 SDVYSFGVLLLELVTGKRP 514
D++S G++ +E++ G+ P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 19/243 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G GTVY + G A+++++ ++ ++ E+ ++ K+ N+VN
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 378 LPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
+ ++ +YL+ GSL D + E EGQ +A + L + L +LH + ++
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQ----IAAVCRECL---QALEFLHSN---QV 137
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRDIKS NILL + ++DFG + E++ + +V GT ++APE + K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPK 196
Query: 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNT--LLKENRLEDVID---KRCADA 550
D++S G++ +E++ G+ P R L ++ T L +L + RC D
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDM 256
Query: 551 DME 553
D+E
Sbjct: 257 DVE 259
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 318 VVGSGGFGTVYRMVMNDCGT-----FAVKRIDRSR-EGSDQVFER-ELEILGSIKHINLV 370
V+G G FG V+ +V G+ +A+K + ++ + D+V + E +IL + H +V
Sbjct: 31 VLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS-ARGLAYLHH 429
L + LI D+L G L L ++++ +K L A L +LH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALALDHLH- 143
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
II+RD+K NILLDE ++DFGL+K +D E + GT Y+APE +
Sbjct: 144 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-CGTVEYMAPEVVNR 200
Query: 490 GRATEKSDVYSFGVLLLELVTGKRP 514
T+ +D +SFGVL+ E++TG P
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 14/199 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G GTVY + G A+++++ ++ ++ E+ ++ K+ N+VN
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 378 LPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
+ ++ +YL+ GSL D + E EGQ +A + L + L +LH + ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQ----IAAVCRECL---QALEFLHSN---QV 138
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRDIKS NILL + ++DFG + E++ + +V GT ++APE + K
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPK 197
Query: 496 SDVYSFGVLLLELVTGKRP 514
D++S G++ +E++ G+ P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 56/300 (18%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRIDR---SREGSDQVFEREL-EILGSIKH 366
+G G FG V + N AVK + ++ SD + E E+ +++G KH
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KH 93
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH-------------EHGEGQQLLNWSAR 413
N++NL G C +I +Y S G+L ++L H +QL +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS-KDL 152
Query: 414 LKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT 473
+ A ARG+ YL C IHRD+ + N+L+ E+ ++DFGLA+ + H+
Sbjct: 153 VSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDX 205
Query: 474 VVAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVV 527
T G ++APE L T +SDV+SFGVLL E+ T G P V+
Sbjct: 206 XKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----- 260
Query: 528 GWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ LLKE D + + C A P RP+ Q+++ L++ V
Sbjct: 261 --LFKLLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 14/199 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G GTVY + G A+++++ ++ ++ E+ ++ K+ N+VN
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 378 LPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
+ ++ +YL+ GSL D + E EGQ +A + L + L +LH + ++
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQ----IAAVCRECL---QALEFLHSN---QV 137
Query: 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
IHRDIKS NILL + ++DFG + E++ + +V GT ++APE + K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPK 196
Query: 496 SDVYSFGVLLLELVTGKRP 514
D++S G++ +E++ G+ P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRI-DRSREGSDQVFERELEILGSI-KHIN 368
+G G FG V + + T AVK + D + E E+E++ I KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKI 416
++NL G C +I +Y S G+L ++L ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
ARG+ YL C IHRD+ + N+L+ EN ++DFGLA+ + + + + T
Sbjct: 163 TYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 477 G-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE L T +SDV+SFGVL+ E+ T G P G+ V L
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP------GIPVEELFKLLK 273
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +R+ D + + C A P RP+ Q+++ L++
Sbjct: 274 EGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 56/300 (18%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRIDR---SREGSDQVFEREL-EILGSIKH 366
+G G FG V + N AVK + ++ SD + E E+ +++G KH
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KH 93
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH-------------EHGEGQQLLNWSAR 413
N++NL G C +I +Y S G+L ++L H +QL +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS-KDL 152
Query: 414 LKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT 473
+ A ARG+ YL C IHRD+ + N+L+ E+ ++DFGLA+ + H+
Sbjct: 153 VSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 205
Query: 474 VVAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVV 527
T G ++APE L T +SDV+SFGVLL E+ T G P V+
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----- 260
Query: 528 GWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ LLKE D + + C A P RP+ Q+++ L++ V
Sbjct: 261 --LFKLLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 56/300 (18%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRIDR---SREGSDQVFEREL-EILGSIKH 366
+G G FG V + N AVK + ++ SD + E E+ +++G KH
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KH 78
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH-------------EHGEGQQLLNWSAR 413
N++NL G C +I +Y S G+L ++L H +QL +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS-KDL 137
Query: 414 LKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT 473
+ A ARG+ YL C IHRD+ + N+L+ E+ ++DFGLA+ + H+
Sbjct: 138 VSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 190
Query: 474 VVAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVV 527
T G ++APE L T +SDV+SFGVLL E+ T G P V+
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----- 245
Query: 528 GWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ LLKE D + + C A P RP+ Q+++ L++ V
Sbjct: 246 --LFKLLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 56/300 (18%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRIDR---SREGSDQVFEREL-EILGSIKH 366
+G G FG V + N AVK + ++ SD + E E+ +++G KH
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KH 86
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH-------------EHGEGQQLLNWSAR 413
N++NL G C +I +Y S G+L ++L H +QL +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS-KDL 145
Query: 414 LKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT 473
+ A ARG+ YL C IHRD+ + N+L+ E+ ++DFGLA+ + H+
Sbjct: 146 VSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 198
Query: 474 VVAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVV 527
T G ++APE L T +SDV+SFGVLL E+ T G P V+
Sbjct: 199 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----- 253
Query: 528 GWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ LLKE D + + C A P RP+ Q+++ L++ V
Sbjct: 254 --LFKLLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 303
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 56/300 (18%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRIDR---SREGSDQVFEREL-EILGSIKH 366
+G G FG V + N AVK + ++ SD + E E+ +++G KH
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KH 82
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH-------------EHGEGQQLLNWSAR 413
N++NL G C +I +Y S G+L ++L H +QL +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS-KDL 141
Query: 414 LKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT 473
+ A ARG+ YL C IHRD+ + N+L+ E+ ++DFGLA+ + H+
Sbjct: 142 VSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 194
Query: 474 VVAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVV 527
T G ++APE L T +SDV+SFGVLL E+ T G P V+
Sbjct: 195 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----- 249
Query: 528 GWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ LLKE D + + C A P RP+ Q+++ L++ V
Sbjct: 250 --LFKLLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 299
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRI-DRSREGSDQVFERELEILGSI-KHIN 368
+G G FG V + + T AVK + D + E E+E++ I KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKI 416
++NL G C +I +Y S G+L ++L ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
ARG+ YL C IHRD+ + N+L+ EN ++DFGLA+ + + + + T
Sbjct: 163 TYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 477 G-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE L T +SDV+SFGVL+ E+ T G P G+ V L
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP------GIPVEELFKLLK 273
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +R+ D + + C A P RP+ Q+++ L++
Sbjct: 274 EGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 125/294 (42%), Gaps = 43/294 (14%)
Query: 318 VVGSGGFGTVYRMVMNDCGT------FAVKRIDRSREGSD-QVFERELEILGSI-KHINL 369
+G+G FG V G AVK + + + + EL+I+ + +H N+
Sbjct: 53 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-------------HGEGQQLLNWSAR--L 414
VNL G C L+I +Y G L +FL H +QL S+R L
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQL---SSRDLL 169
Query: 415 KIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV 474
+ A+G+A+L C IHRD+ + N+LL + DFGLA+ ++++ ++
Sbjct: 170 HFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 475 VAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTL 533
A ++APE + T +SDV+S+G+LL E+ + GLN + L
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-----------LGLN--PYPGIL 273
Query: 534 LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ + V D + I I C P RP+ Q+ L+++
Sbjct: 274 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 327
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 56/300 (18%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRIDR---SREGSDQVFEREL-EILGSIKH 366
+G G FG V + N AVK + ++ SD + E E+ +++G KH
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KH 93
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH-------------EHGEGQQLLNWSAR 413
N++NL G C +I +Y S G+L ++L H +QL +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS-KDL 152
Query: 414 LKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT 473
+ A ARG+ YL C IHRD+ + N+L+ E+ ++DFGLA+ + H+
Sbjct: 153 VSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 205
Query: 474 VVAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVV 527
T G ++APE L T +SDV+SFGVLL E+ T G P V+
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----- 260
Query: 528 GWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ LLKE D + + C A P RP+ Q+++ L++ V
Sbjct: 261 --LFKLLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 56/300 (18%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRIDR---SREGSDQVFEREL-EILGSIKH 366
+G G FG V + N AVK + ++ SD + E E+ +++G KH
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KH 93
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH-------------EHGEGQQLLNWSAR 413
N++NL G C +I +Y S G+L ++L H +QL +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS-KDL 152
Query: 414 LKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT 473
+ A ARG+ YL C IHRD+ + N+L+ E+ ++DFGLA+ + H+
Sbjct: 153 VSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 205
Query: 474 VVAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVV 527
T G ++APE L T +SDV+SFGVLL E+ T G P V+
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----- 260
Query: 528 GWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ LLKE D + + C A P RP+ Q+++ L++ V
Sbjct: 261 --LFKLLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 128/296 (43%), Gaps = 47/296 (15%)
Query: 319 VGSGGFGTVYRM----VMNDCG--TFAVKRIDRSREGSD-QVFERELEILGSIKHINLVN 371
+G G FG V + + G T AVK + + S+ + E +L + H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEH---GEG-----------------QQLLNWS 411
L G C LLI +Y GSL FL E G G ++ L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 412 ARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV 471
+ A ++G+ YL K++HRD+ + NIL+ E + +SDFGL++ + +E++ V
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 472 TTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGW 529
++A E L T +SDV+SFGVLL E+VT G P +R N
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN---- 263
Query: 530 MNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
LLK + D C+ E + + +C PD RP + + LE+
Sbjct: 264 ---LLKTGHRMERPDN-CS-------EEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 56/300 (18%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRIDR---SREGSDQVFEREL-EILGSIKH 366
+G G FG V + N AVK + ++ SD + E E+ +++G KH
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KH 85
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH-------------EHGEGQQLLNWSAR 413
N++NL G C +I +Y S G+L ++L H +QL +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS-KDL 144
Query: 414 LKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT 473
+ A ARG+ YL C IHRD+ + N+L+ E+ ++DFGLA+ + H+
Sbjct: 145 VSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 197
Query: 474 VVAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVV 527
T G ++APE L T +SDV+SFGVLL E+ T G P V+
Sbjct: 198 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----- 252
Query: 528 GWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ LLKE D + + C A P RP+ Q+++ L++ V
Sbjct: 253 --LFKLLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 302
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRI-DRSREGSDQVFERELEILGSI-KHIN 368
+G G FG V + + T AVK + D + E E+E++ I KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKI 416
++NL G C +I +Y S G+L ++L ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD-EEAHVTTVV 475
ARG+ YL C IHRD+ + N+L+ EN ++DFGLA+ + + + TT
Sbjct: 163 TYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 476 AGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE L T +SDV+SFGVL+ E+ T G P G+ V L
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP------GIPVEELFKLLK 273
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +R+ D + + C A P RP+ Q+++ L++
Sbjct: 274 EGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRI-DRSREGSDQVFERELEILGSI-KHIN 368
+G G FG V + + T AVK + D + E E+E++ I KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKI 416
++NL G C +I +Y S G+L ++L ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD-EEAHVTTVV 475
ARG+ YL C IHRD+ + N+L+ EN ++DFGLA+ + + + TT
Sbjct: 163 TYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 476 AGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE L T +SDV+SFGVL+ E+ T G P G+ V L
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP------GIPVEELFKLLK 273
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +R+ D + + C A P RP+ Q+++ L++
Sbjct: 274 EGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 56/300 (18%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRIDR---SREGSDQVFEREL-EILGSIKH 366
+G G FG V + N AVK + ++ SD + E E+ +++G KH
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG--KH 134
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH-------------EHGEGQQLLNWSAR 413
N++NL G C +I +Y S G+L ++L H +QL +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS-KDL 193
Query: 414 LKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT 473
+ A ARG+ YL C IHRD+ + N+L+ E+ ++DFGLA+ + H+
Sbjct: 194 VSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDY 246
Query: 474 VVAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVV 527
T G ++APE L T +SDV+SFGVLL E+ T G P V+
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----- 301
Query: 528 GWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ LLKE D + + C A P RP+ Q+++ L++ V
Sbjct: 302 --LFKLLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 46/293 (15%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRI--DRSREG-SDQVFEREL-EILGSIKH 366
+G G FG V + + T AVK + D + E SD V E E+ +++G KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG--KH 100
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARL 414
N++NL G C +I +Y S G+L ++L ++ + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 415 KIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV 474
ARG+ YL C IHRD+ + N+L+ EN ++DFGLA+ + + + + T
Sbjct: 161 SCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 475 VAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNT 532
++APE L T +SDV+SFGVL+ E+ T G P G+ V
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP------GIPVEELFKL 271
Query: 533 LLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
L + +R+ D + + C A P RP+ Q+++ L++
Sbjct: 272 LKEGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 128/288 (44%), Gaps = 41/288 (14%)
Query: 303 SCEIIEKLEALDEEDVVGSGGFGTVYRMVMN----DCGTFAVKRIDR---SREGSDQVFE 355
+C I EK L E+ +G G FG V R + + AVK + S+ + F
Sbjct: 6 TCLIGEKDLRLLEK--LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI 63
Query: 356 RELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLK 415
RE+ + S+ H NL+ L G P K+ + + +GSL D L +H +G LL +R
Sbjct: 64 REVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLLGTLSRYA 121
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV- 474
+ + A G+ YL + IHRD+ + N+LL + DFGL + L + H
Sbjct: 122 VQV--AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 475 -VAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNT 532
F + APE L++ + SD + FGV L E+ T G+ P GLN ++
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI------GLNGSQILHK 230
Query: 533 LLKEN----RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSM 576
+ KE R ED C + I + +C P+DRP+
Sbjct: 231 IDKEGERLPRPED-----CP-------QDIYNVMVQCWAHKPEDRPTF 266
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 128/288 (44%), Gaps = 41/288 (14%)
Query: 303 SCEIIEKLEALDEEDVVGSGGFGTVYRMVMN----DCGTFAVKRIDR---SREGSDQVFE 355
+C I EK L E+ +G G FG V R + + AVK + S+ + F
Sbjct: 2 TCLIGEKDLRLLEK--LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI 59
Query: 356 RELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLK 415
RE+ + S+ H NL+ L G P K+ + + +GSL D L +H +G LL +R
Sbjct: 60 REVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLLGTLSRYA 117
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV- 474
+ + A G+ YL + IHRD+ + N+LL + DFGL + L + H
Sbjct: 118 VQV--AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE 172
Query: 475 -VAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNT 532
F + APE L++ + SD + FGV L E+ T G+ P GLN ++
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI------GLNGSQILHK 226
Query: 533 LLKEN----RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSM 576
+ KE R ED C + I + +C P+DRP+
Sbjct: 227 IDKEGERLPRPED-----CP-------QDIYNVMVQCWAHKPEDRPTF 262
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 128/288 (44%), Gaps = 41/288 (14%)
Query: 303 SCEIIEKLEALDEEDVVGSGGFGTVYRMVMN----DCGTFAVKRIDR---SREGSDQVFE 355
+C I EK L E+ +G G FG V R + + AVK + S+ + F
Sbjct: 6 TCLIGEKDLRLLEK--LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI 63
Query: 356 RELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLK 415
RE+ + S+ H NL+ L G P K+ + + +GSL D L +H +G LL +R
Sbjct: 64 REVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLLGTLSRYA 121
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV- 474
+ + A G+ YL + IHRD+ + N+LL + DFGL + L + H
Sbjct: 122 VQV--AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 475 -VAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNT 532
F + APE L++ + SD + FGV L E+ T G+ P GLN ++
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW------IGLNGSQILHK 230
Query: 533 LLKEN----RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSM 576
+ KE R ED C + I + +C P+DRP+
Sbjct: 231 IDKEGERLPRPED-----CP-------QDIYNVMVQCWAHKPEDRPTF 266
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 128/288 (44%), Gaps = 41/288 (14%)
Query: 303 SCEIIEKLEALDEEDVVGSGGFGTVYRMVMN----DCGTFAVKRIDR---SREGSDQVFE 355
+C I EK L E+ +G G FG V R + + AVK + S+ + F
Sbjct: 2 TCLIGEKDLRLLEK--LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI 59
Query: 356 RELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLK 415
RE+ + S+ H NL+ L G P K+ + + +GSL D L +H +G LL +R
Sbjct: 60 REVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLLGTLSRYA 117
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV- 474
+ + A G+ YL + IHRD+ + N+LL + DFGL + L + H
Sbjct: 118 VQV--AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172
Query: 475 -VAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNT 532
F + APE L++ + SD + FGV L E+ T G+ P GLN ++
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI------GLNGSQILHK 226
Query: 533 LLKEN----RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSM 576
+ KE R ED C + I + +C P+DRP+
Sbjct: 227 IDKEGERLPRPED-----CP-------QDIYNVMVQCWAHKPEDRPTF 262
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 307 IEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVK--RIDRSREGSDQVFERELEILGSI 364
+EK L++ +G G +G VY+ N TFA+K R+++ EG RE+ IL +
Sbjct: 1 MEKYHGLEK---IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL 57
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
KH N+V L +L++++L L L G + + + L L G+
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFL---LQLLNGI 113
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFGYLA 483
AY H +++HRD+K N+L++ E ++DFGLA+ + + VV T Y A
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRA 168
Query: 484 PEYLQ-SGRATEKSDVYSFGVLLLELVTG 511
P+ L S + + D++S G + E+V G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRIDRSREGSD--QVFERELEILGSIKHINLVNLRG 374
+G G F V R ++ AVK ID+++ S Q RE+ I+ + H N+V L
Sbjct: 15 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
T L+ +Y S G + D+L HG W + K A R + C K
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHG-------W-MKEKEARAKFRQIVSAVQYCHQK 125
Query: 435 -IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
I+HRD+K+ N+LLD ++ ++DFG + + G+ Y APE Q +
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 494 -EKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L LV+G P D
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRI-DRSREGSDQVFERELEILGSI-KHIN 368
+G G FG V + + T AVK + D + E E+E++ I KH N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKI 416
++NL G C +I +Y S G+L ++L ++ + + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
ARG+ YL C IHRD+ + N+L+ EN ++DFGLA+ + + + + T
Sbjct: 209 TYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 477 G-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE L T +SDV+SFGVL+ E+ T G P G+ V L
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP------GIPVEELFKLLK 319
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +R+ D + + C A P RP+ Q+++ L++
Sbjct: 320 EGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 29/212 (13%)
Query: 317 DVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSI--KHINLVNLRG 374
+ VG G +G V+R + + G +I SR+ +Q + RE EI ++ +H N++
Sbjct: 14 ECVGKGRYGEVWRGLWH--GESVAVKIFSSRD--EQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 375 ---YCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
R +T+L LI Y GSL DFL +Q L L++A+ +A GLA+LH +
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLHVE 124
Query: 431 CC-----PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV---TTVVAGTFGYL 482
P I HRD KS N+L+ NL+ ++D GLA + ++ GT Y+
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 483 APEYLQSGRATE------KSDVYSFGVLLLEL 508
APE L T+ +D+++FG++L E+
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 128/288 (44%), Gaps = 41/288 (14%)
Query: 303 SCEIIEKLEALDEEDVVGSGGFGTVYRMVMN----DCGTFAVKRIDR---SREGSDQVFE 355
+C I EK L E+ +G G FG V R + + AVK + S+ + F
Sbjct: 2 TCLIGEKDLRLLEK--LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI 59
Query: 356 RELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLK 415
RE+ + S+ H NL+ L G P K+ + + +GSL D L +H +G LL +R
Sbjct: 60 REVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLLGTLSRYA 117
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV- 474
+ + A G+ YL + IHRD+ + N+LL + DFGL + L + H
Sbjct: 118 VQV--AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172
Query: 475 -VAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNT 532
F + APE L++ + SD + FGV L E+ T G+ P GLN ++
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW------IGLNGSQILHK 226
Query: 533 LLKEN----RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSM 576
+ KE R ED C + I + +C P+DRP+
Sbjct: 227 IDKEGERLPRPED-----CP-------QDIYNVMVQCWAHKPEDRPTF 262
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 307 IEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVK--RIDRSREGSDQVFERELEILGSI 364
+EK L++ +G G +G VY+ N TFA+K R+++ EG RE+ IL +
Sbjct: 1 MEKYHGLEK---IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL 57
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
KH N+V L +L++++L L L G + + + L L G+
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFL---LQLLNGI 113
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFGYLA 483
AY H +++HRD+K N+L++ E ++DFGLA+ + + VV T Y A
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRA 168
Query: 484 PEYLQ-SGRATEKSDVYSFGVLLLELVTG 511
P+ L S + + D++S G + E+V G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRIDRSREGSD--QVFERELEILGSIKHINLVNLRG 374
+G G F V R ++ AVK ID+++ S Q RE+ I+ + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
T L+ +Y S G + D+L HG ++ K A R + C K
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKE--------KEARAKFRQIVSAVQYCHQK 132
Query: 435 -IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
I+HRD+K+ N+LLD ++ ++DFG + + G+ Y APE Q +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 494 -EKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L LV+G P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRIDRSREGSD--QVFERELEILGSIKHINLVNLRG 374
+G G F V R ++ AVK ID+++ S Q RE+ I+ + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
T L+ +Y S G + D+L HG ++ K A R + C K
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKE--------KEARAKFRQIVSAVQYCHQK 132
Query: 435 -IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
I+HRD+K+ N+LLD ++ ++DFG + + G+ Y APE Q +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 494 -EKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L LV+G P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 303 SCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG----TFAVKRIDR---SREGSDQVFE 355
+C I EK L E+ +G G FG V R + + AVK + S+ + F
Sbjct: 12 TCLIGEKDLRLLEK--LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI 69
Query: 356 RELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLK 415
RE+ + S+ H NL+ L G P K+ + + +GSL D L +H +G LL +R
Sbjct: 70 REVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLLGTLSRYA 127
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV- 474
+ + A G+ YL + IHRD+ + N+LL + DFGL + L + H
Sbjct: 128 VQV--AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 182
Query: 475 -VAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNT 532
F + APE L++ + SD + FGV L E+ T G+ P GLN ++
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW------IGLNGSQILHK 236
Query: 533 LLKE-NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSM 576
+ KE RL D C + I + +C P+DRP+
Sbjct: 237 IDKEGERLPRPED--CP-------QDIYNVMVQCWAHKPEDRPTF 272
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 303 SCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG----TFAVKRIDR---SREGSDQVFE 355
+C I EK L E+ +G G FG V R + + AVK + S+ + F
Sbjct: 12 TCLIGEKDLRLLEK--LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI 69
Query: 356 RELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLK 415
RE+ + S+ H NL+ L G P K+ + + +GSL D L +H +G LL +R
Sbjct: 70 REVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH-QGHFLLGTLSRYA 127
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV- 474
+ + A G+ YL + IHRD+ + N+LL + DFGL + L + H
Sbjct: 128 VQV--AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE 182
Query: 475 -VAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNT 532
F + APE L++ + SD + FGV L E+ T G+ P GLN ++
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW------IGLNGSQILHK 236
Query: 533 LLKE-NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSM 576
+ KE RL D C + I + +C P+DRP+
Sbjct: 237 IDKEGERLPRPED--CP-------QDIYNVMVQCWAHKPEDRPTF 272
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 39/311 (12%)
Query: 308 EKLEALDEEDVVGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEI 360
EK+ L E +G G FG VY ++ + T AVK ++ S +++ F E +
Sbjct: 17 EKITLLRE---LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH------EHGEGQQLLNWSARL 414
+ ++V L G L++ + ++ G L +L E+ G+ +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 415 KIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV 474
++A A G+AYL+ K +HRD+ + N ++ + + DFG+ + + E A+
Sbjct: 134 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY-ETAYYRKG 189
Query: 475 VAGTFG--YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMN 531
G ++APE L+ G T SD++SFGV+L E+ + ++P +GL+
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY------QGLS------ 237
Query: 532 TLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPC 591
E L+ V+D D E + ++ C NP RP+ +++ LL+ ++
Sbjct: 238 ---NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 294
Query: 592 PS-DFYESHSD 601
P F+ S +
Sbjct: 295 PEVSFFHSEEN 305
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 34/265 (12%)
Query: 337 TFAVKRI-DRSREGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLLIYDYLSMGSL 394
T AVK + D + E E+E++ I KH N++NL G C +I +Y S G+L
Sbjct: 56 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 115
Query: 395 DDFLHEHGEG------------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKS 442
++L ++ + + + ARG+ YL C IHRD+ +
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLTA 172
Query: 443 SNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSF 501
N+L+ EN ++DFGLA+ + + + + T ++APE L T +SDV+SF
Sbjct: 173 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 232
Query: 502 GVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILE 560
GVL+ E+ T G P G+ V L + +R+ D +
Sbjct: 233 GVLMWEIFTLGGSPYP------GIPVEELFKLLKEGHRM---------DKPANCTNELYM 277
Query: 561 IAARCTDANPDDRPSMNQVLQLLEQ 585
+ C A P RP+ Q+++ L++
Sbjct: 278 MMRDCWHAVPSQRPTFKQLVEDLDR 302
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 34/265 (12%)
Query: 337 TFAVKRI-DRSREGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLLIYDYLSMGSL 394
T AVK + D + E E+E++ I KH N++NL G C +I +Y S G+L
Sbjct: 58 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 117
Query: 395 DDFLHEHGEG------------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKS 442
++L ++ + + + ARG+ YL C IHRD+ +
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAA 174
Query: 443 SNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSF 501
N+L+ EN ++DFGLA+ + + + + T ++APE L T +SDV+SF
Sbjct: 175 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 234
Query: 502 GVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILE 560
GVL+ E+ T G P G+ V L + +R+ D +
Sbjct: 235 GVLMWEIFTLGGSPYP------GIPVEELFKLLKEGHRM---------DKPANCTNELYM 279
Query: 561 IAARCTDANPDDRPSMNQVLQLLEQ 585
+ C A P RP+ Q+++ L++
Sbjct: 280 MMRDCWHAVPSQRPTFKQLVEDLDR 304
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 34/265 (12%)
Query: 337 TFAVKRI-DRSREGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLLIYDYLSMGSL 394
T AVK + D + E E+E++ I KH N++NL G C +I +Y S G+L
Sbjct: 61 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 395 DDFLHEHGEG------------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKS 442
++L ++ + + + ARG+ YL C IHRD+ +
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAA 177
Query: 443 SNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSF 501
N+L+ EN ++DFGLA+ + + + + T ++APE L T +SDV+SF
Sbjct: 178 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 237
Query: 502 GVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILE 560
GVL+ E+ T G P G+ V L + +R+ D +
Sbjct: 238 GVLMWEIFTLGGSPYP------GIPVEELFKLLKEGHRM---------DKPANCTNELYM 282
Query: 561 IAARCTDANPDDRPSMNQVLQLLEQ 585
+ C A P RP+ Q+++ L++
Sbjct: 283 MMRDCWHAVPSQRPTFKQLVEDLDR 307
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 15/201 (7%)
Query: 318 VVGSGGFGTVYRMVMNDCGTFAVKRIDRS----REGSDQVFERELEILGSIKHINLVNLR 373
+G+G FG V+ + G + ++ + R + E +L + H ++ +
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
G + +I DY+ G L L + Q+ N A+ A L YLH
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLRK---SQRFPNPVAKF-YAAEVCLALEYLH---SK 125
Query: 434 KIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
II+RD+K NILLD+N ++DFG AK + D VT + GT Y+APE + +
Sbjct: 126 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVVSTKPYN 181
Query: 494 EKSDVYSFGVLLLELVTGKRP 514
+ D +SFG+L+ E++ G P
Sbjct: 182 KSIDWWSFGILIYEMLAGYTP 202
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 307 IEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVK--RIDRSREGSDQVFERELEILGSI 364
+EK L++ +G G +G VY+ N TFA+K R+++ EG RE+ IL +
Sbjct: 1 MEKYHGLEK---IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKEL 57
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
KH N+V L +L++++L L L G + + + L L G+
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFL---LQLLNGI 113
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFGYLA 483
AY H +++HRD+K N+L++ E ++DFGLA+ + + +V T Y A
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV--TLWYRA 168
Query: 484 PEYLQ-SGRATEKSDVYSFGVLLLELVTG 511
P+ L S + + D++S G + E+V G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRI-DRSREGSDQVFERELEILGSI-KHIN 368
+G G FG V + + T AVK + D + E E+E++ I KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKI 416
++NL G C +I Y S G+L ++L ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
ARG+ YL C IHRD+ + N+L+ EN ++DFGLA+ + + + + T
Sbjct: 163 TYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 477 G-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE L T +SDV+SFGVL+ E+ T G P G+ V L
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP------GIPVEELFKLLK 273
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +R+ D + + C A P RP+ Q+++ L++
Sbjct: 274 EGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 8/198 (4%)
Query: 318 VVGSGGFGTVYRMVMNDCGTFAV-KRIDRSR--EGSDQVFERELEILGSIKHINLVNL-- 372
+G+G +G ++ G V K +D E Q+ E+ +L +KH N+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH--D 430
R R T ++ +Y G L + + + +Q L+ L++ L H D
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
++HRD+K +N+ LD + DFGLA++L + + T V GT Y++PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRM 191
Query: 491 RATEKSDVYSFGVLLLEL 508
EKSD++S G LL EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 319 VGSGGFGTVYRMVMNDCGTF-AVKRID-RSREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G+G + TVY+ + G + A+K + S EG+ RE+ ++ +KH N+V L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA------RGLAYLHHD 430
L+++++ D+ L ++ + + + N L++ L +GLA+ H +
Sbjct: 73 HTENKLTLVFEFM-----DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFGYLAPEYLQS 489
KI+HRD+K N+L+++ + + DFGLA+ + + VV T Y AP+ L
Sbjct: 128 ---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWYRAPDVLMG 182
Query: 490 GRATEKS-DVYSFGVLLLELVTGK 512
R S D++S G +L E++TGK
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRI-DRSREGSDQVFERELEILGSI-KHIN 368
+G G FG V + + T AVK + D + E E+E++ I KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKI 416
++NL G C +I Y S G+L ++L ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
ARG+ YL C IHRD+ + N+L+ EN ++DFGLA+ + + + + T
Sbjct: 163 TYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 477 G-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE L T +SDV+SFGVL+ E+ T G P G+ V L
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP------GIPVEELFKLLK 273
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +R+ D + + C A P RP+ Q+++ L++
Sbjct: 274 EGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRIDRSREGSD--QVFERELEILGSIKHINLVNLRG 374
+G G F V R ++ AVK ID+++ S Q RE+ I+ + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
T L+ +Y S G + D+L HG ++ K A R + C K
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKE--------KEARAKFRQIVSAVQYCHQK 132
Query: 435 -IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
I+HRD+K+ N+LLD ++ ++DFG + + G Y APE Q +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 494 -EKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L LV+G P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGT------FAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G+G FG V G AVK + + + + EL+I+ + +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGE----------GQQLLNWSARLKIALGS 420
NL G C L+I +Y G L +FL L+ L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TF 479
A+G+A+L C IHRD+ + N+LL + DFGLA+ ++++ ++ A
Sbjct: 174 AQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 480 GYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
++APE + T +SDV+S+G+LL E+ + GLN + L+
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS-----------LGLN--PYPGILVNSKFY 277
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ V D + I I C P RP+ Q+ L+++
Sbjct: 278 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 316 EDVVGSGGFGTVYRMVMNDCG----TFAVKRI--DRSREGSDQVFERELEILGSIKHINL 369
++V+GSG V C A+KRI ++ + D++ +E++ + H N+
Sbjct: 20 QEVIGSGATAVVQAAY---CAPKKEKVAIKRINLEKCQTSMDELL-KEIQAMSQCHHPNI 75
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLH------EHGEGQQLLNWSARLKIALGSARG 423
V+ + L+ LS GS+ D + EH G +L+ S I G
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG--VLDESTIATILREVLEG 133
Query: 424 LAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD----EEAHVTTVVAGTF 479
L YLH + IHRD+K+ NILL E+ ++DFG++ L V GT
Sbjct: 134 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 480 GYLAPEYLQSGRATE-KSDVYSFGVLLLELVTGKRP 514
++APE ++ R + K+D++SFG+ +EL TG P
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 37/290 (12%)
Query: 318 VVGSGGFGTVYRMVMNDCG----TFAVKRIDRS-REGSDQVFERELEILGSIKHINLVNL 372
++G G FG VY V + AVK + + + F E I+ ++ H ++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
G T +I + G L +L + ++L + +L + +AYL C
Sbjct: 75 IGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESINC 130
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
+HRDI NIL+ + DFGL++ + DE+ + +V +++PE + R
Sbjct: 131 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 187
Query: 493 TEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
T SDV+ F V + E+++ GK+ P F +V+G L K +RL D
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQ---PFFWLENKDVIG---VLEKGDRL--------PKPD 233
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSDFYESHSD 601
+ + + RC D +P DRP +++ L SD Y+ D
Sbjct: 234 L-CPPVLYTLMTRCWDYDPSDRPRFTELVCSL---------SDVYQMEKD 273
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 37/290 (12%)
Query: 318 VVGSGGFGTVYRMVMNDCG----TFAVKRIDRS-REGSDQVFERELEILGSIKHINLVNL 372
++G G FG VY V + AVK + + + F E I+ ++ H ++V L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
G T +I + G L +L + ++L + +L + +AYL C
Sbjct: 91 IGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESINC 146
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
+HRDI NIL+ + DFGL++ + DE+ + +V +++PE + R
Sbjct: 147 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 203
Query: 493 TEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
T SDV+ F V + E+++ GK+ P F +V+G L K +RL D
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQ---PFFWLENKDVIG---VLEKGDRL--------PKPD 249
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSDFYESHSD 601
+ + + RC D +P DRP +++ L SD Y+ D
Sbjct: 250 L-CPPVLYTLMTRCWDYDPSDRPRFTELVCSL---------SDVYQMEKD 289
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 47/296 (15%)
Query: 319 VGSGGFGTVYRM----VMNDCG--TFAVKRIDRSREGSD-QVFERELEILGSIKHINLVN 371
+G G FG V + + G T AVK + + S+ + E +L + H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEH---GEG-----------------QQLLNWS 411
L G C LLI +Y GSL FL E G G ++ L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 412 ARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV 471
+ A ++G+ YL ++HRD+ + NIL+ E + +SDFGL++ + +E++ V
Sbjct: 151 DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 472 TTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGW 529
++A E L T +SDV+SFGVLL E+VT G P +R N
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN---- 263
Query: 530 MNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
LLK + D C+ E + + +C PD RP + + LE+
Sbjct: 264 ---LLKTGHRMERPDN-CS-------EEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 316 EDVVGSGGFGTVYRMVMNDCG----TFAVKRI--DRSREGSDQVFERELEILGSIKHINL 369
++V+GSG V C A+KRI ++ + D++ +E++ + H N+
Sbjct: 15 QEVIGSGATAVVQAAY---CAPKKEKVAIKRINLEKCQTSMDELL-KEIQAMSQCHHPNI 70
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLH------EHGEGQQLLNWSARLKIALGSARG 423
V+ + L+ LS GS+ D + EH G +L+ S I G
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG--VLDESTIATILREVLEG 128
Query: 424 LAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD----EEAHVTTVVAGTF 479
L YLH + IHRD+K+ NILL E+ ++DFG++ L V GT
Sbjct: 129 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 480 GYLAPEYLQSGRATE-KSDVYSFGVLLLELVTGKRP 514
++APE ++ R + K+D++SFG+ +EL TG P
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 123/288 (42%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGT------FAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G+G FG V G AVK + + + + EL+I+ + +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLH------EHGEGQQLLNWSAR----LKIALGS 420
NL G C L+I +Y G L +FL E + N +A L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TF 479
A+G+A+L C IHRD+ + N+LL + DFGLA+ ++++ ++ A
Sbjct: 174 AQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 480 GYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
++APE + T +SDV+S+G+LL E+ + GLN + L+
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS-----------LGLN--PYPGILVNSKFY 277
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587
+ V D + I I C P RP+ Q+ L+++
Sbjct: 278 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 37/290 (12%)
Query: 318 VVGSGGFGTVYRMVMNDCG----TFAVKRIDRS-REGSDQVFERELEILGSIKHINLVNL 372
++G G FG VY V + AVK + + + F E I+ ++ H ++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
G T +I + G L +L + ++L + +L + +AYL C
Sbjct: 79 IGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESINC 134
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
+HRDI NIL+ + DFGL++ + DE+ + +V +++PE + R
Sbjct: 135 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 493 TEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551
T SDV+ F V + E+++ GK+ P F +V+G L K +RL D
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQ---PFFWLENKDVIG---VLEKGDRL--------PKPD 237
Query: 552 METVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSDFYESHSD 601
+ + + RC D +P DRP +++ L SD Y+ D
Sbjct: 238 L-CPPVLYTLMTRCWDYDPSDRPRFTELVCSL---------SDVYQMEKD 277
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRIDRSREGSD--QVFERELEILGSIKHINLVNLRG 374
+G G F V R ++ AV+ ID+++ S Q RE+ I+ + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
T L+ +Y S G + D+L HG ++ K A R + C K
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKE--------KEARAKFRQIVSAVQYCHQK 132
Query: 435 -IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
I+HRD+K+ N+LLD ++ ++DFG + + G+ Y APE Q +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 494 -EKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L LV+G P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 56/304 (18%)
Query: 318 VVGSGGFGTVYRMVMNDCGT------FAVKRIDRSREGSD-QVFERELEILGSI-KHINL 369
+G+G FG V G AVK + + + + EL+I+ + +H N+
Sbjct: 38 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 97
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------------------- 404
VNL G C L+I +Y G L +FL E
Sbjct: 98 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL 157
Query: 405 QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464
+ LL++S+++ A+G+A+L C IHRD+ + N+LL + DFGLA+ +
Sbjct: 158 RDLLHFSSQV------AQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDI 208
Query: 465 VDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRG 523
+++ ++ A ++APE + T +SDV+S+G+LL E+ + G
Sbjct: 209 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS-----------LG 257
Query: 524 LNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
LN + L+ + V D + I I C P RP+ Q+ L
Sbjct: 258 LNP--YPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 315
Query: 584 EQEV 587
+++
Sbjct: 316 QEQA 319
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRI-DRSREGSDQVFERELEILGSI-KHIN 368
+G G FG V + + T AVK + D + E E+E++ I KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKI 416
+++L G C +I +Y S G+L ++L ++ + + +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
ARG+ YL C IHRD+ + N+L+ EN ++DFGLA+ + + + + T
Sbjct: 163 TYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 477 G-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE L T +SDV+SFGVL+ E+ T G P G+ V L
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP------GIPVEELFKLLK 273
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +R+ D + + C A P RP+ Q+++ L++
Sbjct: 274 EGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 316 EDVVGSGGFGTVY--RMVMNDCGTFAVKRIDRSR--EGSDQVFERELEILGSIKHINLVN 371
+ +G G F V R V+ AVK ID+++ S Q RE+ I+ + H N+V
Sbjct: 20 QKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L T L+ +Y S G + D+L HG ++ K A R + C
Sbjct: 79 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE--------KEARAKFRQIVSAVQYC 130
Query: 432 CPK-IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
K I+HRD+K+ N+LLD ++ ++DFG + + G+ Y APE Q
Sbjct: 131 HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT--VGNKLDTFCGSPPYAAPELFQGK 188
Query: 491 RAT-EKSDVYSFGVLLLELVTGKRPTD 516
+ + DV+S GV+L LV+G P D
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 318 VVGSGGFGTVYRMVMNDCGTFAV-KRIDRSR--EGSDQVFERELEILGSIKHINLVNL-- 372
+G+G +G ++ G V K +D E Q+ E+ +L +KH N+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH--D 430
R R T ++ +Y G L + + + +Q L+ L++ L H D
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
++HRD+K +N+ LD + DFGLA++L +E V GT Y++PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRM 191
Query: 491 RATEKSDVYSFGVLLLEL 508
EKSD++S G LL EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 308 EKLEALDEEDVVGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEI 360
EK+ L E +G G FG VY ++ + T AVK ++ S +++ F E +
Sbjct: 17 EKITLLRE---LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH------EHGEGQQLLNWSARL 414
+ ++V L G L++ + ++ G L +L E+ G+ +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 415 KIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV 474
++A A G+AYL+ K +HRD+ + N ++ + + DFG+ + + + + +
Sbjct: 134 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK-- 188
Query: 475 VAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVG 528
G G ++APE L+ G T SD++SFGV+L E+ + ++P +GL+
Sbjct: 189 --GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY------QGLS--- 237
Query: 529 WMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588
E L+ V+D D E + ++ C NP RP+ +++ LL+ ++
Sbjct: 238 ------NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 291
Query: 589 SPCPS-DFYESHSD 601
P F+ S +
Sbjct: 292 PSFPEVSFFHSEEN 305
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 308 EKLEALDEEDVVGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEI 360
EK+ L E +G G FG VY ++ + T AVK ++ S +++ F E +
Sbjct: 17 EKITLLRE---LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH------EHGEGQQLLNWSARL 414
+ ++V L G L++ + ++ G L +L E+ G+ +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 415 KIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV 474
++A A G+AYL+ K +HRD+ + N ++ + + DFG+ + + + +
Sbjct: 134 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX----X 186
Query: 475 VAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVG 528
G G ++APE L+ G T SD++SFGV+L E+ + ++P +GL+
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY------QGLS--- 237
Query: 529 WMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588
E L+ V+D D E + ++ C NP+ RP+ +++ LL+ ++
Sbjct: 238 ------NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH 291
Query: 589 SPCPS-DFYESHSD 601
P F+ S +
Sbjct: 292 PSFPEVSFFHSEEN 305
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 318 VVGSGGFGTVYRMV----MNDCGTFAVKRIDRS---REGSDQVFER-ELEILGSIKHINL 369
V+G GG+G V+++ N FA+K + ++ R D + E IL +KH +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLN----WSARLKIALGSARGLA 425
V+L + LI +YLS G L F+ EG + + + A + +ALG
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALG------ 135
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
+LH II+RD+K NI+L+ ++DFGL K + + VT GT Y+APE
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESI-HDGTVTHTFCGTIEYMAPE 191
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
L D +S G L+ +++TG P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVY--------RMVMNDCGTFAVKRI-DRSREGSDQVFERELEILGSI-KHIN 368
+G G FG V + + T AVK + D + E E+E++ I KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKI 416
++ L G C +I +Y S G+L ++L ++ + + +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
ARG+ YL C IHRD+ + N+L+ EN ++DFGLA+ + + + + T
Sbjct: 163 TYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 477 G-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534
++APE L T +SDV+SFGVL+ E+ T G P G+ V L
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP------GIPVEELFKLLK 273
Query: 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+ +R+ D + + C A P RP+ Q+++ L++
Sbjct: 274 EGHRM---------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCGT---FAVKRI-DRSREGSDQVFERELEILGSIKHINL 369
D DV+G+G F V ++ D T A+K I ++ EG + E E+ +L IKH N+
Sbjct: 21 DFRDVLGTGAFSEV--ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNI 78
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
V L LI +S G L D + E G + ++RL + A + YLH
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE--RDASRLIFQVLDA--VKYLHD 134
Query: 430 DCCPKIIHRDIKSSNIL---LDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
I+HRD+K N+L LDE+ + +SDFGL+K+ ++ V + GT GY+APE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEV 189
Query: 487 LQSGRATEKSDVYSFGVLLLELVTGKRP 514
L ++ D +S GV+ L+ G P
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 129/304 (42%), Gaps = 36/304 (11%)
Query: 299 MPYPSCEIIEKLEALDEEDVVGSGGFGTVYR---MVMNDCGTFAVKRIDRSREGSDQVFE 355
+PY + + + L+ +G G FG V ++ T + +EG+
Sbjct: 15 LPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH 74
Query: 356 R----ELEILGSI-KHINLVNLRGYCRLPATKLL-IYDYLSMGSLDDFLHEHGEG----- 404
R EL+IL I H+N+VNL G C P L+ I ++ G+L +L
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 405 ---QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461
+ L + + A+G+ +L K IHRD+ + NILL E + DFGLA
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLA 191
Query: 462 KLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTF 519
+ + + +V A ++APE + T +SDV+SFGVLL E+ + G P
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP--- 248
Query: 520 VKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQV 579
G+ + LKE R D T E + + C P RP+ +++
Sbjct: 249 ---GVKIDEEFXRRLKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSEL 297
Query: 580 LQLL 583
++ L
Sbjct: 298 VEHL 301
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCGT---FAVKRIDR-SREGSDQVFERELEILGSIKHINL 369
D DV+G+G F V ++ D T A+K I + + EG + E E+ +L IKH N+
Sbjct: 21 DFRDVLGTGAFSEV--ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
V L LI +S G L D + E G + ++RL + A + YLH
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE--RDASRLIFQVLDA--VKYLHD 134
Query: 430 DCCPKIIHRDIKSSNIL---LDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
I+HRD+K N+L LDE+ + +SDFGL+K+ ++ V + GT GY+APE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEV 189
Query: 487 LQSGRATEKSDVYSFGVLLLELVTGKRP 514
L ++ D +S GV+ L+ G P
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 25/223 (11%)
Query: 308 EKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFE------REL 358
E + D +DV+G G V R V G FAVK + R +Q+ E RE
Sbjct: 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRET 150
Query: 359 EILGSIK-HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
IL + H +++ L + L++D + G L D+L E + L+ I
Sbjct: 151 HILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIM 206
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
+++LH + I+HRD+K NILLD+N++ +SDFG + L E + G
Sbjct: 207 RSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHL--EPGEKLRELCG 261
Query: 478 TFGYLAPEYLQSGRAT------EKSDVYSFGVLLLELVTGKRP 514
T GYLAPE L+ ++ D+++ GV+L L+ G P
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCGT---FAVKRIDR-SREGSDQVFERELEILGSIKHINL 369
D DV+G+G F V ++ D T A+K I + + EG + E E+ +L IKH N+
Sbjct: 21 DFRDVLGTGAFSEV--ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
V L LI +S G L D + E G + ++RL + A + YLH
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE--RDASRLIFQVLDA--VKYLHD 134
Query: 430 DCCPKIIHRDIKSSNIL---LDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
I+HRD+K N+L LDE+ + +SDFGL+K+ ++ V + GT GY+APE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEV 189
Query: 487 LQSGRATEKSDVYSFGVLLLELVTGKRP 514
L ++ D +S GV+ L+ G P
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRIDRSREGSD--QVFERELEILGSIKHINLVNLRG 374
+G G F V R ++ AV+ ID+++ S Q RE+ I+ + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
T L+ +Y S G + D+L HG ++ K A R + C K
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKE--------KEARAKFRQIVSAVQYCHQK 132
Query: 435 -IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
I+HRD+K+ N+LLD ++ ++DFG + + G+ Y APE Q +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDEFCGSPPYAAPELFQGKKYD 190
Query: 494 -EKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L LV+G P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 318 VVGSGGFGTVYRMV----MNDCGTFAVKRIDRS---REGSDQVFER-ELEILGSIKHINL 369
V+G GG+G V+++ N FA+K + ++ R D + E IL +KH +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLN----WSARLKIALGSARGLA 425
V+L + LI +YLS G L F+ EG + + + A + +ALG
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALG------ 135
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
+LH II+RD+K NI+L+ ++DFGL K + + VT GT Y+APE
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESI-HDGTVTHXFCGTIEYMAPE 191
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
L D +S G L+ +++TG P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 308 EKLEALDEEDVVGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEI 360
EK+ L E +G G FG VY ++ + T AVK ++ S +++ F E +
Sbjct: 16 EKITLLRE---LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 72
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH------EHGEGQQLLNWSARL 414
+ ++V L G L++ + ++ G L +L E+ G+ +
Sbjct: 73 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 132
Query: 415 KIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV 474
++A A G+AYL+ K +HRD+ + N ++ + + DFG+ + + + + +
Sbjct: 133 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK-- 187
Query: 475 VAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVG 528
G G ++APE L+ G T SD++SFGV+L E+ + ++P +GL+
Sbjct: 188 --GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY------QGLS--- 236
Query: 529 WMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588
E L+ V+D D E + ++ C NP RP+ +++ LL+ ++
Sbjct: 237 ------NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 290
Query: 589 SPCPS-DFYESHSD 601
P F+ S +
Sbjct: 291 PSFPEVSFFHSEEN 304
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCGT---FAVKRIDR-SREGSDQVFERELEILGSIKHINL 369
D DV+G+G F V ++ D T A+K I + + EG + E E+ +L IKH N+
Sbjct: 21 DFRDVLGTGAFSEV--ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
V L LI +S G L D + E G + ++RL + A + YLH
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE--RDASRLIFQVLDA--VKYLHD 134
Query: 430 DCCPKIIHRDIKSSNIL---LDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
I+HRD+K N+L LDE+ + +SDFGL+K+ ++ V + GT GY+APE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEV 189
Query: 487 LQSGRATEKSDVYSFGVLLLELVTGKRP 514
L ++ D +S GV+ L+ G P
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRIDRSR--EGSDQVFERELEILGSIKHINLVNLRG 374
+G G F V R ++ A+K ID+++ S Q RE+ I+ + H N+V L
Sbjct: 23 IGKGNFAKVKLARHILTG-REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
T LI +Y S G + D+L HG ++ S +I + Y H +
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCHQK---R 134
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT- 493
I+HRD+K+ N+LLD ++ ++DFG + G Y APE Q +
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFT--VGGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 494 EKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L LV+G P D
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRIDRSR--EGSDQVFERELEILGSIKHINLVNLRG 374
+G G F V R ++ A+K ID+++ S Q RE+ I+ + H N+V L
Sbjct: 20 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
T LI +Y S G + D+L HG ++ S +I + Y H +
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCHQK---R 131
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT- 493
I+HRD+K+ N+LLD ++ ++DFG + G+ Y APE Q +
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFT--VGGKLDTFCGSPPYAAPELFQGKKYDG 189
Query: 494 EKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L LV+G P D
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGT-FAVKRI-DRSREGSDQVFERELEILGSIKHINLVNLR 373
++ +G+G F V G FAVK I ++ +G + E E+ +L IKH N+V L
Sbjct: 27 KETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALE 86
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
P L+ +S G L D + E G + + S ++ L + + YLH
Sbjct: 87 DIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE-KDASTLIRQVLDA---VYYLHR---M 139
Query: 434 KIIHRDIKSSNILL---DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
I+HRD+K N+L DE + +SDFGL+K+ + + V + GT GY+APE L
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQK 197
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
++ D +S GV+ L+ G P
Sbjct: 198 PYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 318 VVGSGGFGTVYRMVMNDCGTFAV-KRIDRSR--EGSDQVFERELEILGSIKHINLVNL-- 372
+G+G +G ++ G V K +D E Q+ E+ +L +KH N+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH--D 430
R R T ++ +Y G L + + + +Q L+ L++ L H D
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
++HRD+K +N+ LD + DFGLA++L + + GT Y++PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 491 RATEKSDVYSFGVLLLEL 508
EKSD++S G LL EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 308 EKLEALDEEDVVGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEI 360
EK+ L E +G G FG VY ++ + T AVK ++ S +++ F E +
Sbjct: 17 EKITLLRE---LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH------EHGEGQQLLNWSARL 414
+ ++V L G L++ + ++ G L +L E+ G+ +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 415 KIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV 474
++A A G+AYL+ K +HRD+ + N ++ + + DFG+ + + + +
Sbjct: 134 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX----X 186
Query: 475 VAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVG 528
G G ++APE L+ G T SD++SFGV+L E+ + ++P +GL+
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY------QGLS--- 237
Query: 529 WMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588
E L+ V+D D E + ++ C NP RP+ +++ LL+ ++
Sbjct: 238 ------NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 291
Query: 589 SPCPS-DFYESHSD 601
P F+ S +
Sbjct: 292 PSFPEVSFFHSEEN 305
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 308 EKLEALDEEDVVGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEI 360
EK+ L E +G G FG VY ++ + T AVK ++ S +++ F E +
Sbjct: 14 EKITLLRE---LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 70
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH------EHGEGQQLLNWSARL 414
+ ++V L G L++ + ++ G L +L E+ G+ +
Sbjct: 71 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 130
Query: 415 KIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV 474
++A A G+AYL+ K +HRD+ + N ++ + + DFG+ + + + +
Sbjct: 131 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX----X 183
Query: 475 VAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVG 528
G G ++APE L+ G T SD++SFGV+L E+ + ++P +GL+
Sbjct: 184 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY------QGLS--- 234
Query: 529 WMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588
E L+ V+D D E + ++ C NP RP+ +++ LL+ ++
Sbjct: 235 ------NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 288
Query: 589 SPCPS-DFYESHSD 601
P F+ S +
Sbjct: 289 PSFPEVSFFHSEEN 302
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 142/314 (45%), Gaps = 45/314 (14%)
Query: 308 EKLEALDEEDVVGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEI 360
EK+ L E +G G FG VY ++ + T AVK ++ S +++ F E +
Sbjct: 17 EKITLLRE---LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH------EHGEGQQLLNWSARL 414
+ ++V L G L++ + ++ G L +L E+ G+ +
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 415 KIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV 474
++A A G+AYL+ K +HR++ + N ++ + + DFG+ + + + + +
Sbjct: 134 QMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR--- 187
Query: 475 VAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVG 528
G G ++APE L+ G T SD++SFGV+L E+ + ++P +GL+
Sbjct: 188 -KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY------QGLS--- 237
Query: 529 WMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588
E L+ V+D D E + ++ C NP+ RP+ +++ LL+ ++
Sbjct: 238 ------NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH 291
Query: 589 SPCPS-DFYESHSD 601
P F+ S +
Sbjct: 292 PSFPEVSFFHSEEN 305
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 142/314 (45%), Gaps = 45/314 (14%)
Query: 308 EKLEALDEEDVVGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEI 360
EK+ L E +G G FG VY ++ + T AVK ++ S +++ F E +
Sbjct: 18 EKITLLRE---LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 74
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLH------EHGEGQQLLNWSARL 414
+ ++V L G L++ + ++ G L +L E+ G+ +
Sbjct: 75 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 134
Query: 415 KIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV 474
++A A G+AYL+ K +HR++ + N ++ + + DFG+ + + + + +
Sbjct: 135 QMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK-- 189
Query: 475 VAGTFG-----YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVG 528
G G ++APE L+ G T SD++SFGV+L E+ + ++P +GL+
Sbjct: 190 --GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY------QGLS--- 238
Query: 529 WMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588
E L+ V+D D E + ++ C NP+ RP+ +++ LL+ ++
Sbjct: 239 ------NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH 292
Query: 589 SPCPS-DFYESHSD 601
P F+ S +
Sbjct: 293 PSFPEVSFFHSEEN 306
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 122/293 (41%), Gaps = 50/293 (17%)
Query: 319 VGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G G FG V C T AVK + S+ + EL+IL I H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 371 NLRGYCRLPATKLL-IYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKIA 417
NL G C P L+ I ++ G+L +L + L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
A+G+ +L C IHRD+ + NILL E + DFGLA+ + + +V A
Sbjct: 155 FQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 478 -TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP-----TDPTFVKRGLNVVGWM 530
++APE + T +SDV+SFGVLL E+ + G P D F +R
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-------- 263
Query: 531 NTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
LKE R D T E + + C P RP+ +++++ L
Sbjct: 264 ---LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 122/293 (41%), Gaps = 50/293 (17%)
Query: 319 VGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G G FG V C T AVK + S+ + EL+IL I H+N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 371 NLRGYCRLPATKLL-IYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKIA 417
NL G C P L+ I ++ G+L +L + L + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
A+G+ +L C IHRD+ + NILL E + DFGLA+ + + +V A
Sbjct: 192 FQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 478 -TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP-----TDPTFVKRGLNVVGWM 530
++APE + T +SDV+SFGVLL E+ + G P D F +R
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-------- 300
Query: 531 NTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
LKE R D T E + + C P RP+ +++++ L
Sbjct: 301 ---LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 122/293 (41%), Gaps = 50/293 (17%)
Query: 319 VGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G G FG V C T AVK + S+ + EL+IL I H+N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 371 NLRGYCRLPATKLL-IYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKIA 417
NL G C P L+ I ++ G+L +L + L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
A+G+ +L C IHRD+ + NILL E + DFGLA+ + + +V A
Sbjct: 146 FQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 478 -TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP-----TDPTFVKRGLNVVGWM 530
++APE + T +SDV+SFGVLL E+ + G P D F +R
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-------- 254
Query: 531 NTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
LKE R D T E + + C P RP+ +++++ L
Sbjct: 255 ---LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 124/293 (42%), Gaps = 50/293 (17%)
Query: 319 VGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G G FG V C T AVK + S+ + EL+IL I H+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 371 NLRGYCRLPATKLL-IYDYLSMGSLDDFLHE-------HGEG-----QQLLNWSARLKIA 417
NL G C P L+ I ++ G+L +L + E + L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
A+G+ +L C IHRD+ + NILL E + DFGLA+ + + +V A
Sbjct: 157 FQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 478 -TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP-----TDPTFVKRGLNVVGWM 530
++APE + T +SDV+SFGVLL E+ + G P D F +R
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-------- 265
Query: 531 NTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
LKE R D T E + + C P RP+ +++++ L
Sbjct: 266 ---LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 24/246 (9%)
Query: 276 RYTEVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDC 335
R ++V + D T ++ G P E+ + + V+G+G FG VY+ + D
Sbjct: 2 RGSKVSRDKDGSKVTTVVATPGQGPDRPQEV-----SYTDTKVIGNGSFGVVYQAKLCDS 56
Query: 336 GTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKL------LIYDY 388
G A+K++ + + + REL+I+ + H N+V LR + K L+ DY
Sbjct: 57 GELVAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 112
Query: 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD 448
+ H Q L +L + R LAY+H I HRDIK N+LLD
Sbjct: 113 VPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF---GICHRDIKPQNLLLD 168
Query: 449 ENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-QSGRATEKSDVYSFGVLLL 506
+ + DFG AK LV E +V+ + + Y APE + + T DV+S G +L
Sbjct: 169 PDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLA 226
Query: 507 ELVTGK 512
EL+ G+
Sbjct: 227 ELLLGQ 232
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 129/313 (41%), Gaps = 50/313 (15%)
Query: 299 MPYPSCEIIEKLEALDEEDVVGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD- 351
+PY + + + L +G G FG V C T AVK + S+
Sbjct: 6 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 65
Query: 352 QVFERELEILGSI-KHINLVNLRGYCRLPATKLL-IYDYLSMGSLDDFLHEHGEG----- 404
+ EL+IL I H+N+VNL G C P L+ I ++ G+L +L
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 405 -------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSD 457
+ L + + A+G+ +L C IHRD+ + NILL E + D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICD 182
Query: 458 FGLAKLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP- 514
FGLA+ + + +V A ++APE + T +SDV+SFGVLL E+ + G P
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Query: 515 ----TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANP 570
D F +R LKE R D T E + + C P
Sbjct: 243 PGVKIDEEFCRR-----------LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEP 283
Query: 571 DDRPSMNQVLQLL 583
RP+ +++++ L
Sbjct: 284 SQRPTFSELVEHL 296
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRIDRSREGSD--QVFERELEILGSIKHINLVNLRG 374
+G G F V R ++ AVK ID+++ S Q RE+ I + H N+V L
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
T L+ +Y S G + D+L HG ++ K A R + C K
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKE--------KEARAKFRQIVSAVQYCHQK 132
Query: 435 -IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
I+HRD+K+ N+LLD + ++DFG + + G Y APE Q +
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFT--FGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 494 -EKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L LV+G P D
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 129/312 (41%), Gaps = 49/312 (15%)
Query: 299 MPYPSCEIIEKLEALDEEDVVGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD- 351
+PY + + + L+ +G G FG V C T AVK + S+
Sbjct: 16 LPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 75
Query: 352 QVFERELEILGSI-KHINLVNLRGYCRLPATKLL-IYDYLSMGSLDDFLHEHGEG----- 404
+ EL+IL I H+N+VNL G C P L+ I ++ G+L +L
Sbjct: 76 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 135
Query: 405 ------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDF 458
+ L + + A+G+ +L C IHRD+ + NILL E + DF
Sbjct: 136 TPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDF 192
Query: 459 GLAKLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP-- 514
GLA+ + + V A ++APE + T +SDV+SFGVLL E+ + G P
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 515 ---TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPD 571
D F +R LKE R D T E + + C P
Sbjct: 253 GVKIDEEFCRR-----------LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPS 293
Query: 572 DRPSMNQVLQLL 583
RP+ +++++ L
Sbjct: 294 QRPTFSELVEHL 305
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 134/314 (42%), Gaps = 49/314 (15%)
Query: 288 TSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSR 347
+ T + D+P+ EI E ++G G FG VY + G A++ ID R
Sbjct: 19 SQTSIFLQEWDIPFEQLEIGE---------LIGKGRFGQVYHGRWH--GEVAIRLIDIER 67
Query: 348 EGSDQV--FERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQ 405
+ DQ+ F+RE+ +H N+V G C P +I +L + + +
Sbjct: 68 DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR---DAK 124
Query: 406 QLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGL----A 461
+L+ + +IA +G+ YLH I+H+D+KS N+ D N + ++DFGL
Sbjct: 125 IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180
Query: 462 KLLVDEEAHVTTVVAGTFGYLAPEYL-QSGRATEK--------SDVYSFGVLLLELVTGK 512
L + G +LAPE + Q TE+ SDV++ G + EL +
Sbjct: 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE 240
Query: 513 RPTDPTFVKRGLNVVGW-MNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPD 571
P F + + W M T +K N + + K +D I C +
Sbjct: 241 WP----FKTQPAEAIIWQMGTGMKPNLSQIGMGKEISD-----------ILLFCWAFEQE 285
Query: 572 DRPSMNQVLQLLEQ 585
+RP+ +++ +LE+
Sbjct: 286 ERPTFTKLMDMLEK 299
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 32/272 (11%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRI---DRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+GSG FG V+ + G V + DRS+ +Q+ E E+E+L S+ H N++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQI-EAEIEVLKSLDHPNIIKIFEV 88
Query: 376 CRLPATKLLIYDYLSMGSL-DDFLHEHGEGQQLLN-WSARLKIALGSARGLAYLHHDCCP 433
++ + G L + + G+ L + A L + +A LAY H
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA--LAYFH---SQ 143
Query: 434 KIIHRDIKSSNILLDENLEPH----VSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
++H+D+K NIL ++ PH + DFGLA+L +E +T AGT Y+APE +
Sbjct: 144 HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPEVFKR 200
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
T K D++S GV++ L+TG P F L V T + N + C
Sbjct: 201 D-VTFKCDIWSAGVVMYFLLTGCLP----FTGTSLEEVQQKATYKEPNYAVE-----CRP 250
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581
+ V+ + ++ + +P+ RPS QVL
Sbjct: 251 LTPQAVDLLKQMLTK----DPERRPSAAQVLH 278
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 130/309 (42%), Gaps = 46/309 (14%)
Query: 299 MPYPSCEIIEKLEALDEEDVVGSGGFGTVYR---MVMNDCGTFAVKRIDRSREGSDQVFE 355
+PY + + + L+ +G G FG V ++ T + +EG+
Sbjct: 15 LPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH 74
Query: 356 R----ELEILGSI-KHINLVNLRGYCRLPATKLL-IYDYLSMGSLDDFLHEHGEG----- 404
R EL+IL I H+N+VNL G C P L+ I ++ G+L +L
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 405 ---QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461
+ L + + A+G+ +L K IHRD+ + NILL E + DFGLA
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLA 191
Query: 462 KLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP----- 514
+ + + +V A ++APE + T +SDV+SFGVLL E+ + G P
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 251
Query: 515 TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRP 574
D F +R LKE R D T E + + C P RP
Sbjct: 252 IDEEFCRR-----------LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRP 292
Query: 575 SMNQVLQLL 583
+ +++++ L
Sbjct: 293 TFSELVEHL 301
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 30/267 (11%)
Query: 319 VGSGGFGTVYRMV-MNDCGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRG 374
+G GGF Y + M+ FA K + +S + + E+ I S+ + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +Y L + L H + + AR + +G+ YLH++ +
Sbjct: 110 FFE---DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---R 162
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLA-KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
+IHRD+K N+ L+++++ + DFGLA K+ D E T + GT Y+APE L +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHS 220
Query: 494 EKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADME 553
+ D++S G +L L+ GK P + + LKE + ++ +
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP--------------FETSCLKETYIRIKKNEYSVPRHIN 266
Query: 554 TVEAILEIAARCTDANPDDRPSMNQVL 580
V + L R A+P RPS+ ++L
Sbjct: 267 PVASAL--IRRMLHADPTLRPSVAELL 291
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 315 EEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+ V+G+G FG VY+ + D G A+K++ + + + REL+I+ + H N+V LR
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN----RELQIMRKLDHCNIVRLR 79
Query: 374 GYCRLPATKL------LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
+ K L+ DY+ H Q L +L + R LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 138
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H I HRDIK N+LLD + + DFG AK LV E +V+ + + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPEL 193
Query: 487 L-QSGRATEKSDVYSFGVLLLELVTGK 512
+ + T DV+S G +L EL+ G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 128/313 (40%), Gaps = 50/313 (15%)
Query: 299 MPYPSCEIIEKLEALDEEDVVGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD- 351
+PY + + + L +G G FG V C T AVK + S+
Sbjct: 6 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 65
Query: 352 QVFERELEILGSI-KHINLVNLRGYCRLPATKLL-IYDYLSMGSLDDFLHEHGEG----- 404
+ EL+IL I H+N+VNL G C P L+ I ++ G+L +L
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 405 -------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSD 457
+ L + + A+G+ +L C IHRD+ + NILL E + D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICD 182
Query: 458 FGLAKLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP- 514
FGLA+ + + V A ++APE + T +SDV+SFGVLL E+ + G P
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Query: 515 ----TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANP 570
D F +R LKE R D T E + + C P
Sbjct: 243 PGVKIDEEFCRR-----------LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEP 283
Query: 571 DDRPSMNQVLQLL 583
RP+ +++++ L
Sbjct: 284 SQRPTFSELVEHL 296
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 315 EEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+ V+G+G FG VY+ + D G A+K++ + + + REL+I+ + H N+V LR
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLR 79
Query: 374 GYCRLPATKL------LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
+ K L+ DY+ H Q L +L + R LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 138
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H I HRDIK N+LLD + + DFG AK LV E +V+ + + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPEL 193
Query: 487 L-QSGRATEKSDVYSFGVLLLELVTGK 512
+ + T DV+S G +L EL+ G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 307 IEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRS--REGSDQVFERELEILGS 363
I LE L E +GSG G V++M G AVK++ RS +E + ++ +L S
Sbjct: 24 INDLENLGE---MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS 80
Query: 364 IKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARG 423
+V G + T + I L MG+ + L + +G ++ +A+ +
Sbjct: 81 HDCPYIVQCFGTF-ITNTDVFIAMEL-MGTCAEKLKKRMQGPIPERILGKMTVAI--VKA 136
Query: 424 LAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLA 483
L YL +IHRD+K SNILLDE + + DFG++ LVD++A + AG Y+A
Sbjct: 137 LYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS--AGCAAYMA 192
Query: 484 PEYLQSGRATE-----KSDVYSFGVLLLELVTGKRP 514
PE + T+ ++DV+S G+ L+EL TG+ P
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 315 EEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+ V+G+G FG VY+ + D G A+K++ + + + REL+I+ + H N+V LR
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLR 79
Query: 374 GYCRLPATKL------LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
+ K L+ DY+ H Q L +L + R LAY+
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 138
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H I HRDIK N+LLD + + DFG AK LV E +V+ + + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPEL 193
Query: 487 L-QSGRATEKSDVYSFGVLLLELVTGK 512
+ + T DV+S G +L EL+ G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 24/243 (9%)
Query: 279 EVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF 338
+V + D T ++ G P E+ + + V+G+G FG VY+ + D G
Sbjct: 27 KVSRDKDGSKVTTVVATPGQGPDRPQEV-----SYTDTKVIGNGSFGVVYQAKLCDSGEL 81
Query: 339 -AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKL------LIYDYLSM 391
A+K++ + + + REL+I+ + H N+V LR + K L+ DY+
Sbjct: 82 VAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 137
Query: 392 GSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451
H Q L +L + R LAY+H I HRDIK N+LLD +
Sbjct: 138 TVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 193
Query: 452 EP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-QSGRATEKSDVYSFGVLLLELV 509
+ DFG AK LV E +V+ + + Y APE + + T DV+S G +L EL+
Sbjct: 194 AVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELL 251
Query: 510 TGK 512
G+
Sbjct: 252 LGQ 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 121/293 (41%), Gaps = 50/293 (17%)
Query: 319 VGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G G FG V C T AVK + S+ + EL+IL I H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 371 NLRGYCRLPATKLL-IYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKIA 417
NL G C P L+ I ++ G+L +L + L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
A+G+ +L C IHRD+ + NILL E + DFGLA+ + + V A
Sbjct: 155 FQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 478 -TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP-----TDPTFVKRGLNVVGWM 530
++APE + T +SDV+SFGVLL E+ + G P D F +R
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-------- 263
Query: 531 NTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
LKE R D T E + + C P RP+ +++++ L
Sbjct: 264 ---LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G G V G AVK++D ++ ++ E+ I+ H N+V++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 378 LPATKLLIYDYLSMGSLDDFL-HEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
+ ++ ++L G+L D + H +Q+ + L R L+YLH+ +I
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLRALSYLHNQG---VI 163
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS 496
HRDIKS +ILL + +SDFG V +E + GT ++APE + +
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCA-QVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 497 DVYSFGVLLLELVTGKRP 514
D++S G++++E++ G+ P
Sbjct: 223 DIWSLGIMVIEMIDGEPP 240
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 24/243 (9%)
Query: 279 EVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF 338
+V + D T ++ G P E+ + + V+G+G FG VY+ + D G
Sbjct: 5 KVSRDKDGSKVTTVVATPGQGPDRPQEV-----SYTDTKVIGNGSFGVVYQAKLCDSGEL 59
Query: 339 -AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKL------LIYDYLSM 391
A+K++ + + + REL+I+ + H N+V LR + K L+ DY+
Sbjct: 60 VAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 115
Query: 392 GSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451
H Q L +L + R LAY+H I HRDIK N+LLD +
Sbjct: 116 TVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 171
Query: 452 EP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-QSGRATEKSDVYSFGVLLLELV 509
+ DFG AK LV E +V+ + + Y APE + + T DV+S G +L EL+
Sbjct: 172 AVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELL 229
Query: 510 TGK 512
G+
Sbjct: 230 LGQ 232
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 315 EEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+ V+G+G FG VY+ + D G A+K++ + + + REL+I+ + H N+V LR
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLR 79
Query: 374 GYCRLPATKL------LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
+ K L+ DY+ H Q L +L + R LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 138
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H I HRDIK N+LLD + + DFG AK LV E +V+ + + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPEL 193
Query: 487 L-QSGRATEKSDVYSFGVLLLELVTGK 512
+ + T DV+S G +L EL+ G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 24/243 (9%)
Query: 279 EVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF 338
+V + D T ++ G P E+ + + V+G+G FG VY+ + D G
Sbjct: 12 KVSRDKDGSKVTTVVATPGQGPDRPQEV-----SYTDTKVIGNGSFGVVYQAKLCDSGEL 66
Query: 339 -AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKL------LIYDYLSM 391
A+K++ + + + REL+I+ + H N+V LR + K L+ DY+
Sbjct: 67 VAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 122
Query: 392 GSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451
H Q L +L + R LAY+H I HRDIK N+LLD +
Sbjct: 123 TVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 178
Query: 452 EP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-QSGRATEKSDVYSFGVLLLELV 509
+ DFG AK LV E +V+ + + Y APE + + T DV+S G +L EL+
Sbjct: 179 AVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELL 236
Query: 510 TGK 512
G+
Sbjct: 237 LGQ 239
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 128/313 (40%), Gaps = 50/313 (15%)
Query: 299 MPYPSCEIIEKLEALDEEDVVGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD- 351
+PY + + + L +G G FG V C T AVK + S+
Sbjct: 6 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 65
Query: 352 QVFERELEILGSI-KHINLVNLRGYCRLPATKLL-IYDYLSMGSLDDFLHEHGEG----- 404
+ EL+IL I H+N+VNL G C P L+ I ++ G+L +L
Sbjct: 66 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 405 -------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSD 457
+ L + + A+G+ +L C IHRD+ + NILL E + D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICD 182
Query: 458 FGLAKLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP- 514
FGLA+ + + V A ++APE + T +SDV+SFGVLL E+ + G P
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Query: 515 ----TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANP 570
D F +R LKE R D T E + + C P
Sbjct: 243 PGVKIDEEFCRR-----------LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEP 283
Query: 571 DDRPSMNQVLQLL 583
RP+ +++++ L
Sbjct: 284 SQRPTFSELVEHL 296
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 24/243 (9%)
Query: 279 EVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF 338
+V + D T ++ G P E+ + + V+G+G FG VY+ + D G
Sbjct: 1 KVSRDKDGSKVTTVVATPGQGPDRPQEV-----SYTDTKVIGNGSFGVVYQAKLCDSGEL 55
Query: 339 -AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKL------LIYDYLSM 391
A+K++ + + + REL+I+ + H N+V LR + K L+ DY+
Sbjct: 56 VAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 111
Query: 392 GSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451
H Q L +L + R LAY+H I HRDIK N+LLD +
Sbjct: 112 TVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 167
Query: 452 EP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-QSGRATEKSDVYSFGVLLLELV 509
+ DFG AK LV E +V+ + + Y APE + + T DV+S G +L EL+
Sbjct: 168 AVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELL 225
Query: 510 TGK 512
G+
Sbjct: 226 LGQ 228
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 121/293 (41%), Gaps = 50/293 (17%)
Query: 319 VGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G G FG V C T AVK + S+ + EL+IL I H+N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 371 NLRGYCRLPATKLL-IYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKIA 417
NL G C P L+ I ++ G+L +L + L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 418 LGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG 477
A+G+ +L C IHRD+ + NILL E + DFGLA+ + + V A
Sbjct: 155 FQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 478 -TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP-----TDPTFVKRGLNVVGWM 530
++APE + T +SDV+SFGVLL E+ + G P D F +R
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-------- 263
Query: 531 NTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
LKE R D T E + + C P RP+ +++++ L
Sbjct: 264 ---LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 317 DVVGSGGFGTV-----YRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVN 371
+ +G G FG V Y+ F +++ + + +V ERE+ L ++H +++
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRV-EREISYLKLLRHPHIIK 73
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L P +++ +Y + G L D++ E K + G +
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVE--------------KKRMTEDEGRRFFQQII 118
Query: 432 CP-------KIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
C KI+HRD+K N+LLD+NL ++DFGL+ ++ D + G+ Y AP
Sbjct: 119 CAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAP 176
Query: 485 EYLQSG-RATEKSDVYSFGVLLLELVTGKRPTDPTFV 520
E + A + DV+S G++L ++ G+ P D F+
Sbjct: 177 EVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI 213
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 315 EEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+ V+G+G FG VY+ + D G A+K++ + + + REL+I+ + H N+V LR
Sbjct: 25 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLR 80
Query: 374 GYCRLPATKL------LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
+ K L+ DY+ H Q L +L + R LAY+
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 139
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H I HRDIK N+LLD + + DFG AK LV E +V+ + + Y APE
Sbjct: 140 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPEL 194
Query: 487 L-QSGRATEKSDVYSFGVLLLELVTGK 512
+ + T DV+S G +L EL+ G+
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 24/243 (9%)
Query: 279 EVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF 338
+V + D T ++ G P E+ + + V+G+G FG VY+ + D G
Sbjct: 27 KVSRDKDGSKVTTVVATPGQGPDRPQEV-----SYTDTKVIGNGSFGVVYQAKLCDSGEL 81
Query: 339 -AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKL------LIYDYLSM 391
A+K++ + + + REL+I+ + H N+V LR + K L+ DY+
Sbjct: 82 VAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 137
Query: 392 GSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451
H Q L +L + R LAY+H I HRDIK N+LLD +
Sbjct: 138 TVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 193
Query: 452 EP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-QSGRATEKSDVYSFGVLLLELV 509
+ DFG AK LV E +V+ + + Y APE + + T DV+S G +L EL+
Sbjct: 194 AVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELL 251
Query: 510 TGK 512
G+
Sbjct: 252 LGQ 254
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 315 EEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+ V+G+G FG VY+ + D G A+K++ + + + REL+I+ + H N+V LR
Sbjct: 28 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLR 83
Query: 374 GYCRLPATKL------LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
+ K L+ DY+ H Q L +L + R LAY+
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 142
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H I HRDIK N+LLD + + DFG AK LV E +V+ + + Y APE
Sbjct: 143 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--YRAPEL 197
Query: 487 L-QSGRATEKSDVYSFGVLLLELVTGK 512
+ + T DV+S G +L EL+ G+
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 315 EEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+ V+G+G FG VY+ + D G A+K++ + + + REL+I+ + H N+V LR
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLR 79
Query: 374 GYCRLPATKL------LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
+ K L+ DY+ H Q L +L + R LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 138
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H I HRDIK N+LLD + + DFG AK LV E +V+ + + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPEL 193
Query: 487 L-QSGRATEKSDVYSFGVLLLELVTGK 512
+ + T DV+S G +L EL+ G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 24/243 (9%)
Query: 279 EVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF 338
+V + D T ++ G P E+ + + V+G+G FG VY+ + D G
Sbjct: 29 KVSRDKDGSKVTTVVATPGQGPDRPQEV-----SYTDTKVIGNGSFGVVYQAKLCDSGEL 83
Query: 339 -AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKL------LIYDYLSM 391
A+K++ + + + REL+I+ + H N+V LR + K L+ DY+
Sbjct: 84 VAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 139
Query: 392 GSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451
H Q L +L + R LAY+H I HRDIK N+LLD +
Sbjct: 140 TVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 195
Query: 452 EP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-QSGRATEKSDVYSFGVLLLELV 509
+ DFG AK LV E +V+ + + Y APE + + T DV+S G +L EL+
Sbjct: 196 AVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELL 253
Query: 510 TGK 512
G+
Sbjct: 254 LGQ 256
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 24/243 (9%)
Query: 279 EVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF 338
+V + D T ++ G P E+ + + V+G+G FG VY+ + D G
Sbjct: 72 KVSRDKDGSKVTTVVATPGQGPDRPQEV-----SYTDTKVIGNGSFGVVYQAKLCDSGEL 126
Query: 339 -AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKL------LIYDYLSM 391
A+K++ + + + REL+I+ + H N+V LR + K L+ DY+
Sbjct: 127 VAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 182
Query: 392 GSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451
H Q L +L + R LAY+H I HRDIK N+LLD +
Sbjct: 183 TVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 238
Query: 452 EP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-QSGRATEKSDVYSFGVLLLELV 509
+ DFG AK LV E +V+ + + Y APE + + T DV+S G +L EL+
Sbjct: 239 AVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELL 296
Query: 510 TGK 512
G+
Sbjct: 297 LGQ 299
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 315 EEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+ V+G+G FG VY+ + D G A+K++ + + + REL+I+ + H N+V LR
Sbjct: 29 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLR 84
Query: 374 GYCRLPATKL------LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
+ K L+ DY+ H Q L +L + R LAY+
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 143
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H I HRDIK N+LLD + + DFG AK LV E +V+ + + Y APE
Sbjct: 144 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPEL 198
Query: 487 L-QSGRATEKSDVYSFGVLLLELVTGK 512
+ + T DV+S G +L EL+ G+
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 113/244 (46%), Gaps = 26/244 (10%)
Query: 279 EVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF 338
+V + D T ++ G P E+ + + V+G+G FG VY+ + D G
Sbjct: 31 KVSRDKDGSKVTTVVATPGQGPDRPQEV-----SYTDTKVIGNGSFGVVYQAKLCDSGEL 85
Query: 339 -AVKRIDRSREGSDQVFE-RELEILGSIKHINLVNLRGYCRLPATKL------LIYDYLS 390
A+K++ + D+ F+ REL+I+ + H N+V LR + K L+ DY+
Sbjct: 86 VAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP 140
Query: 391 MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDEN 450
H Q L +L + R LAY+H I HRDIK N+LLD +
Sbjct: 141 ETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF---GICHRDIKPQNLLLDPD 196
Query: 451 LEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-QSGRATEKSDVYSFGVLLLEL 508
+ DFG AK LV E +V+ + + Y APE + + T DV+S G +L EL
Sbjct: 197 TAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAEL 254
Query: 509 VTGK 512
+ G+
Sbjct: 255 LLGQ 258
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 24/243 (9%)
Query: 279 EVRKQVDQETSTKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF 338
+V + D T ++ G P E+ + + V+G+G FG VY+ + D G
Sbjct: 21 KVSRDKDGSKVTTVVATPGQGPDRPQEV-----SYTDTKVIGNGSFGVVYQAKLCDSGEL 75
Query: 339 -AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKL------LIYDYLSM 391
A+K++ + + + REL+I+ + H N+V LR + K L+ DY+
Sbjct: 76 VAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 131
Query: 392 GSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451
H Q L +L + R LAY+H I HRDIK N+LLD +
Sbjct: 132 TVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF---GICHRDIKPQNLLLDPDT 187
Query: 452 EP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-QSGRATEKSDVYSFGVLLLELV 509
+ DFG AK LV E +V+ + + Y APE + + T DV+S G +L EL+
Sbjct: 188 AVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELL 245
Query: 510 TGK 512
G+
Sbjct: 246 LGQ 248
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY +V ++ T A+K ++ + +++ F E ++ ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLL---NWSARLKIALGSARGLA 425
L G L+I + ++ G L +L E +L + S +++A A G+A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG----- 480
YL+ + K +HRD+ + N ++ E+ + DFG+ + + + + G G
Sbjct: 138 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK----GGKGLLPVR 190
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
+++PE L+ G T SDV+SFGV+L E+ T ++P +GL+ E L
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY------QGLS---------NEQVL 235
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
V++ D + +LE+ C NP RPS +++ +++E M P
Sbjct: 236 RFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEE-MEP 285
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 319 VGSGGFGTV----YRMVMNDCGTFAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLR 373
+G G FG+V YRM A+K + + E +D + RE +I+ + + +V L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDV-AIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
G C+ A +L+ + G L FL E + N + L + G+ YL
Sbjct: 77 GVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV---SMGMKYLEEK--- 129
Query: 434 KIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAPEYLQSGR 491
+HRD+ + N+LL +SDFGL+K L ++++ T AG + + APE + +
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 492 ATEKSDVYSFGVLLLE-LVTGKRP 514
+ +SDV+S+GV + E L G++P
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 315 EEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+ V+G+G FG VY+ + D G A+K++ + + + REL+I+ + H N+V LR
Sbjct: 37 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLR 92
Query: 374 GYCRLPATKL------LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
+ K L+ DY+ H Q L +L + R LAY+
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 151
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H I HRDIK N+LLD + + DFG AK LV E +V+ + + Y APE
Sbjct: 152 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPEL 206
Query: 487 L-QSGRATEKSDVYSFGVLLLELVTGK 512
+ + T DV+S G +L EL+ G+
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY +V ++ T A+K ++ + +++ F E ++ ++V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLL---NWSARLKIALGSARGLA 425
L G L+I + ++ G L +L E +L + S +++A A G+A
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG----- 480
YL+ + K +HRD+ + N ++ E+ + DFG+ + + + + + G G
Sbjct: 144 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 196
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
+++PE L+ G T SDV+SFGV+L E+ T ++P +GL+ E L
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY------QGLS---------NEQVL 241
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
V++ D + + E+ C NP RPS +++ +++E M P
Sbjct: 242 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE-MEP 291
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 315 EEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+ V+G+G FG VY+ + D G A+K++ + + + REL+I+ + H N+V LR
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN----RELQIMRKLDHCNIVRLR 79
Query: 374 GYCRLPATKL------LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
+ K L+ DY+ H Q L +L + R LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 138
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H I HRDIK N+LLD + + DFG AK LV E +V+ + + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPEL 193
Query: 487 L-QSGRATEKSDVYSFGVLLLELVTGK 512
+ + T DV+S G +L EL+ G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 315 EEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
+ V+G+G FG VY+ + D G A+K++ + + + REL+I+ + H N+V LR
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN----RELQIMRKLDHCNIVRLR 79
Query: 374 GYCRLPATKL------LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
+ K L+ DY+ H Q L +L + R LAY+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYI 138
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H I HRDIK N+LLD + + DFG AK LV E +V+ + + Y APE
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--YRAPEL 193
Query: 487 L-QSGRATEKSDVYSFGVLLLELVTGK 512
+ + T DV+S G +L EL+ G+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY +V ++ T A+K ++ + +++ F E ++ ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLL---NWSARLKIALGSARGLA 425
L G L+I + ++ G L +L E +L + S +++A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG----- 480
YL+ + K +HRD+ + N ++ E+ + DFG+ + + + + + G G
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 198
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
+++PE L+ G T SDV+SFGV+L E+ T ++P +GL+ E L
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY------QGLS---------NEQVL 243
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
V++ D + + E+ C NP RPS +++ +++E M P
Sbjct: 244 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE-MEP 293
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY +V ++ T A+K ++ + +++ F E ++ ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLL---NWSARLKIALGSARGLA 425
L G L+I + ++ G L +L E +L + S +++A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG----- 480
YL+ + K +HRD+ + N ++ E+ + DFG+ + + + + + G G
Sbjct: 140 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 192
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
+++PE L+ G T SDV+SFGV+L E+ T ++P +GL+ E L
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY------QGLS---------NEQVL 237
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
V++ D + + E+ C NP RPS +++ +++E M P
Sbjct: 238 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE-MEP 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY +V ++ T A+K ++ + +++ F E ++ ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLL---NWSARLKIALGSARGLA 425
L G L+I + ++ G L +L E +L + S +++A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG----- 480
YL+ + K +HRD+ + N ++ E+ + DFG+ + + + + + G G
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 199
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
+++PE L+ G T SDV+SFGV+L E+ T ++P +GL+ E L
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY------QGLS---------NEQVL 244
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
V++ D + + E+ C NP RPS +++ +++E M P
Sbjct: 245 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE-MEP 294
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 44 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 101
Query: 372 LRGYCRLPATKLLI-YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L +C KL Y G L ++ + G + +I L YLH
Sbjct: 102 LY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 156
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQS 489
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 157 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 490 GRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY +V ++ T A+K ++ + +++ F E ++ ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLL---NWSARLKIALGSARGLA 425
L G L+I + ++ G L +L E +L + S +++A A G+A
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG----- 480
YL+ + K +HRD+ + N ++ E+ + DFG+ + + + + + G G
Sbjct: 175 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 227
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
+++PE L+ G T SDV+SFGV+L E+ T ++P +GL+ E L
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY------QGLS---------NEQVL 272
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
V++ D + + E+ C NP RPS +++ +++E M P
Sbjct: 273 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE-MEP 322
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY +V ++ T A+K ++ + +++ F E ++ ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLL---NWSARLKIALGSARGLA 425
L G L+I + ++ G L +L E +L + S +++A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG----- 480
YL+ + K +HRD+ + N ++ E+ + DFG+ + + + + + G G
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 198
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
+++PE L+ G T SDV+SFGV+L E+ T ++P +GL+ E L
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY------QGLS---------NEQVL 243
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
V++ D + + E+ C NP RPS +++ +++E M P
Sbjct: 244 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE-MEP 293
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY +V ++ T A+K ++ + +++ F E ++ ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLL---NWSARLKIALGSARGLA 425
L G L+I + ++ G L +L E +L + S +++A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG----- 480
YL+ + K +HRD+ + N ++ E+ + DFG+ + + + + + G G
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 205
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
+++PE L+ G T SDV+SFGV+L E+ T ++P +GL+ E L
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY------QGLS---------NEQVL 250
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
V++ D + + E+ C NP RPS +++ +++E M P
Sbjct: 251 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE-MEP 300
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY +V ++ T A+K ++ + +++ F E ++ ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLL---NWSARLKIALGSARGLA 425
L G L+I + ++ G L +L E +L + S +++A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG----- 480
YL+ + K +HRD+ + N + E+ + DFG+ + + + + + G G
Sbjct: 140 YLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 192
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
+++PE L+ G T SDV+SFGV+L E+ T ++P +GL+ E L
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY------QGLS---------NEQVL 237
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
V++ D + +LE+ C NP RPS +++ +++E M P
Sbjct: 238 RFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEE-MEP 287
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 307 IEKLEALDEEDVVGSGGFGTVY---RMVMNDCGT-FAVKRIDRS----REGSDQVFEREL 358
IE E L V+G+G +G V+ ++ +D G +A+K + ++ + + + E
Sbjct: 53 IENFELLK---VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 359 EILGSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIA 417
++L I+ + Y TKL LI DY++ G L F H Q+ ++I
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL--FTHL---SQRERFTEHEVQIY 164
Query: 418 LGS-ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA 476
+G L +LH II+RDIK NILLD N ++DFGL+K V +E
Sbjct: 165 VGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC 221
Query: 477 GTFGYLAPEYLQSGRATEKS--DVYSFGVLLLELVTGKRP 514
GT Y+AP+ ++ G + D +S GVL+ EL+TG P
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 30/267 (11%)
Query: 319 VGSGGFGTVYRMV-MNDCGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRG 374
+G GGF Y + M+ FA K + +S + + E+ I S+ + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +Y L + L H + + AR + +G+ YLH++ +
Sbjct: 110 FFE---DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---R 162
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLA-KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
+IHRD+K N+ L+++++ + DFGLA K+ D E + GT Y+APE L +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIAPEVLCKKGHS 220
Query: 494 EKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADME 553
+ D++S G +L L+ GK P + + LKE + ++ +
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP--------------FETSCLKETYIRIKKNEYSVPRHIN 266
Query: 554 TVEAILEIAARCTDANPDDRPSMNQVL 580
V + L R A+P RPS+ ++L
Sbjct: 267 PVASAL--IRRMLHADPTLRPSVAELL 291
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHIN---LVNLRG 374
+G G +G V +M G AVKRI R+ S + +++ S++ ++ V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ + + SLD F + + Q + KIA+ + L +LH
Sbjct: 118 ALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 174
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-----QS 489
+IHRD+K SN+L++ + + DFG++ LVD A T+ AG Y+APE + Q
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK--TIDAGCKPYMAPERINPELNQK 232
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
G + KSD++S G+ ++EL + P D W +L+ V+++
Sbjct: 233 GYSV-KSDIWSLGITMIELAILRFPYD-----------SWGTPF---QQLKQVVEEPSPQ 277
Query: 550 ADMETVEA-ILEIAARCTDANPDDRPSMNQVLQ 581
+ A ++ ++C N +RP+ +++Q
Sbjct: 278 LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 35/225 (15%)
Query: 313 LDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHI---- 367
+E V+G G FG V + D +A+K+I + E + E+ +L S+ H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVR 66
Query: 368 ---------NLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
N V + +T + +Y G+L D +H QQ + + L
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK--------LLVDEE-- 468
L+Y+H IIHRD+K NI +DE+ + DFGLAK L +D +
Sbjct: 127 ---EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 469 ---AHVTTVVAGTFGYLAPEYLQ-SGRATEKSDVYSFGVLLLELV 509
+ T GT Y+A E L +G EK D+YS G++ E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 138/310 (44%), Gaps = 63/310 (20%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSI--KHINLVNLR 373
++ +G G FG V+R G +I SRE ++ + RE EI ++ +H N++
Sbjct: 14 QESIGKGRFGEVWRGKWR--GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFI 69
Query: 374 GYCRL---PATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
T+L L+ DY GSL D+L+ + + +K+AL +A GLA+LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHM 124
Query: 430 DCC-----PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA-----GTF 479
+ P I HRD+KS NIL+ +N ++D GLA + + A T +A GT
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 182
Query: 480 GYLAPEYLQSG------RATEKSDVYSFGVLLLELVTGKR------------------PT 515
Y+APE L + +++D+Y+ G++ E+ +R P+
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDLVPS 240
Query: 516 DPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPS 575
DP+ + M ++ E +L I R E + + +I C AN R +
Sbjct: 241 DPSVEE--------MRKVVCEQKLRPNIPNRWQSC--EALRVMAKIMRECWYANGAARLT 290
Query: 576 MNQVLQLLEQ 585
++ + L Q
Sbjct: 291 ALRIKKTLSQ 300
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSD--QVFERELEILGSIKHINLV 370
D ++ +G G F V R V G FA K I+ + + Q ERE I ++H N+V
Sbjct: 32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV 91
Query: 371 NLRGYCRLPATKLLIYDYLSMGSL------DDFLHEHGEG---QQLLNWSARLKIALGSA 421
L + + L++D ++ G L +F E QQ+L
Sbjct: 92 RLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL------------- 138
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEP---HVSDFGLAKLLVDEEAHVTTVVAGT 478
+AY H + I+HR++K N+LL + ++DFGLA + D EA AGT
Sbjct: 139 ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG--FAGT 193
Query: 479 FGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
GYL+PE L+ ++ D+++ GV+L L+ G P
Sbjct: 194 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 115
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 116 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 33/216 (15%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSI--KHINLVNLR 373
++ +G G FG V+R G +I SRE ++ + RE EI ++ +H N++
Sbjct: 34 QESIGKGRFGEVWRGKWR--GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFI 89
Query: 374 GYCRL---PATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
T+L L+ DY GSL D+L+ + + +K+AL +A GLA+LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHM 144
Query: 430 DCC-----PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA-----GTF 479
+ P I HRD+KS NIL+ +N ++D GLA + + A T +A GT
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 202
Query: 480 GYLAPEYLQSG------RATEKSDVYSFGVLLLELV 509
Y+APE L + +++D+Y+ G++ E+
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 33/216 (15%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSI--KHINLVNLR 373
++ +G G FG V+R G +I SRE ++ + RE EI ++ +H N++
Sbjct: 9 QESIGKGRFGEVWRGKWR--GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFI 64
Query: 374 GYCRL---PATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
T+L L+ DY GSL D+L+ + + +K+AL +A GLA+LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHM 119
Query: 430 DCC-----PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA-----GTF 479
+ P I HRD+KS NIL+ +N ++D GLA + + A T +A GT
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 177
Query: 480 GYLAPEYLQSG------RATEKSDVYSFGVLLLELV 509
Y+APE L + +++D+Y+ G++ E+
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 138/310 (44%), Gaps = 63/310 (20%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSI--KHINLVNLR 373
++ +G G FG V+R G +I SRE ++ + RE EI ++ +H N++
Sbjct: 11 QESIGKGRFGEVWRGKWR--GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFI 66
Query: 374 GYCRL---PATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
T+L L+ DY GSL D+L+ + + +K+AL +A GLA+LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHM 121
Query: 430 DCC-----PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA-----GTF 479
+ P I HRD+KS NIL+ +N ++D GLA + + A T +A GT
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 179
Query: 480 GYLAPEYLQSG------RATEKSDVYSFGVLLLELVTGKR------------------PT 515
Y+APE L + +++D+Y+ G++ E+ +R P+
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDLVPS 237
Query: 516 DPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPS 575
DP+ + M ++ E +L I R E + + +I C AN R +
Sbjct: 238 DPSVEE--------MRKVVCEQKLRPNIPNRWQSC--EALRVMAKIMRECWYANGAARLT 287
Query: 576 MNQVLQLLEQ 585
++ + L Q
Sbjct: 288 ALRIKKTLSQ 297
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSD--QVFERELEILGSIKHINLV 370
D ++ +G G F V R V G FA K I+ + + Q ERE I ++H N+V
Sbjct: 8 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV 67
Query: 371 NLRGYCRLPATKLLIYDYLSMGSL------DDFLHEHGEG---QQLLNWSARLKIALGSA 421
L + + L++D ++ G L +F E QQ+L
Sbjct: 68 RLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE------------ 115
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEP---HVSDFGLAKLLVDEEAHVTTVVAGT 478
+AY H + I+HR++K N+LL + ++DFGLA + D EA AGT
Sbjct: 116 -SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHGFAGT 169
Query: 479 FGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
GYL+PE L+ ++ D+++ GV+L L+ G P
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 33/216 (15%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSI--KHINLVNLR 373
++ +G G FG V+R G +I SRE ++ + RE EI ++ +H N++
Sbjct: 47 QESIGKGRFGEVWRGKWR--GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFI 102
Query: 374 GYCRL---PATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
T+L L+ DY GSL D+L+ + + +K+AL +A GLA+LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHM 157
Query: 430 DCC-----PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA-----GTF 479
+ P I HRD+KS NIL+ +N ++D GLA + + A T +A GT
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 215
Query: 480 GYLAPEYLQSG------RATEKSDVYSFGVLLLELV 509
Y+APE L + +++D+Y+ G++ E+
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 121/291 (41%), Gaps = 48/291 (16%)
Query: 319 VGSGGFGTVYR---MVMNDCGTFAVKRIDRSREGSDQVFER----ELEILGSI-KHINLV 370
+G G FG V ++ T + +EG+ R EL+IL I H+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 371 NLRGYCRLPATKLL-IYDYLSMGSLDDFLHEHGEG----------QQLLNWSARLKIALG 419
NL G C P L+ I ++ G+L +L + L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 420 SARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG-T 478
A+G+ +L K IHRD+ + NILL E + DFGLA+ + + V A
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 479 FGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP-----TDPTFVKRGLNVVGWMNT 532
++APE + T +SDV+SFGVLL E+ + G P D F +R
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR---------- 263
Query: 533 LLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
LKE R D T E + + C P RP+ +++++ L
Sbjct: 264 -LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 33/215 (15%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSI--KHINLVNLR 373
++ +G G FG V+R G +I SRE ++ + RE EI ++ +H N++
Sbjct: 8 QESIGKGRFGEVWRGKWR--GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFI 63
Query: 374 GYCRL---PATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
T+L L+ DY GSL D+L+ + + +K+AL +A GLA+LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHM 118
Query: 430 DCC-----PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVA-----GTF 479
+ P I HRD+KS NIL+ +N ++D GLA + + A T +A GT
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 176
Query: 480 GYLAPEYLQSG------RATEKSDVYSFGVLLLEL 508
Y+APE L + +++D+Y+ G++ E+
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 134/291 (46%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY +V ++ T A+K ++ + +++ F E ++ ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLL---NWSARLKIALGSARGLA 425
L G L+I + ++ G L +L E +L + S +++A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG----- 480
YL+ + K +HRD+ + N ++ E+ + DFG+ + + + + G G
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK----GGKGLLPVR 199
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
+++PE L+ G T SDV+SFGV+L E+ T ++P +GL+ E L
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY------QGLS---------NEQVL 244
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
V++ D + + E+ C NP RPS +++ +++E M P
Sbjct: 245 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE-MEP 294
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSD--QVFERELEILGSIKHINLV 370
D ++ +G G F V R V G FA K I+ + + Q ERE I ++H N+V
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV 68
Query: 371 NLRGYCRLPATKLLIYDYLSMGSL------DDFLHEHGEG---QQLLNWSARLKIALGSA 421
L + + L++D ++ G L +F E QQ+L
Sbjct: 69 RLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE------------ 116
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEP---HVSDFGLAKLLVDEEAHVTTVVAGT 478
+AY H + I+HR++K N+LL + ++DFGLA + D EA AGT
Sbjct: 117 -SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHGFAGT 170
Query: 479 FGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
GYL+PE L+ ++ D+++ GV+L L+ G P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSD--QVFERELEILGSIKHINLV 370
D ++ +G G F V R V G FA K I+ + + Q ERE I ++H N+V
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV 68
Query: 371 NLRGYCRLPATKLLIYDYLSMGSL------DDFLHEHGEG---QQLLNWSARLKIALGSA 421
L + + L++D ++ G L +F E QQ+L
Sbjct: 69 RLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE------------ 116
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEP---HVSDFGLAKLLVDEEAHVTTVVAGT 478
+AY H + I+HR++K N+LL + ++DFGLA + D EA AGT
Sbjct: 117 -SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHGFAGT 170
Query: 479 FGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
GYL+PE L+ ++ D+++ GV+L L+ G P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 115
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 116 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 30/267 (11%)
Query: 319 VGSGGFGTVYRMV-MNDCGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRG 374
+G GGF Y + M+ FA K + +S + + E+ I S+ + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +Y L + L H + + AR + +G+ YLH++ +
Sbjct: 110 FFE---DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---R 162
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLA-KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
+IHRD+K N+ L+++++ + DFGLA K+ D E + GT Y+APE L +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD--LCGTPNYIAPEVLCKKGHS 220
Query: 494 EKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADME 553
+ D++S G +L L+ GK P + + LKE + ++ +
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP--------------FETSCLKETYIRIKKNEYSVPRHIN 266
Query: 554 TVEAILEIAARCTDANPDDRPSMNQVL 580
V + L R A+P RPS+ ++L
Sbjct: 267 PVASAL--IRRMLHADPTLRPSVAELL 291
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 10/203 (4%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVN 371
LD +G G G V G AVK +D ++ ++ E+ I+ +H N+V
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
+ + ++ ++L G+L D + Q LN + + LAYLH
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAVLQALAYLH--- 158
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+IHRDIKS +ILL + +SDFG + ++ + GT ++APE +
Sbjct: 159 AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQ-ISKDVPKRKXLVGTPYWMAPEVISRSL 217
Query: 492 ATEKSDVYSFGVLLLELVTGKRP 514
+ D++S G++++E+V G+ P
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 30/267 (11%)
Query: 319 VGSGGFGTVYRMV-MNDCGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRG 374
+G GGF Y + M+ FA K + +S + + E+ I S+ + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +Y L + L H + + AR + +G+ YLH++ +
Sbjct: 94 FFE---DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLHNN---R 146
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLA-KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
+IHRD+K N+ L+++++ + DFGLA K+ D E + GT Y+APE L +
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD--LCGTPNYIAPEVLCKKGHS 204
Query: 494 EKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADME 553
+ D++S G +L L+ GK P + + LKE + ++ +
Sbjct: 205 FEVDIWSLGCILYTLLVGKPP--------------FETSCLKETYIRIKKNEYSVPRHIN 250
Query: 554 TVEAILEIAARCTDANPDDRPSMNQVL 580
V + L R A+P RPS+ ++L
Sbjct: 251 PVASAL--IRRMLHADPTLRPSVAELL 275
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 319 VGSGGFGTV----YRMVMNDCGTFAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLR 373
+G G FG+V YRM A+K + + E +D + RE +I+ + + +V L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDV-AIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
G C+ A +L+ + G L FL E + N + L + G+ YL
Sbjct: 403 GVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV---SMGMKYLEEK--- 455
Query: 434 KIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAPEYLQSGR 491
+HR++ + N+LL +SDFGL+K L ++++ T AG + + APE + +
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 492 ATEKSDVYSFGVLLLE-LVTGKRP 514
+ +SDV+S+GV + E L G++P
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 115
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 116 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 115 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVN 371
LD +G G G V + G AVK++D ++ ++ E+ I+ +H N+V
Sbjct: 22 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFL-HEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+ + ++ ++L G+L D + H +Q+ + L + L+ LH
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLHAQ 135
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+IHRDIKS +ILL + +SDFG V +E + GT ++APE +
Sbjct: 136 G---VIHRDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPELISRL 191
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
+ D++S G++++E+V G+ P
Sbjct: 192 PYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 317 DVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRG-- 374
+ VG G +G V+R G +I SR+ E EL ++H N++
Sbjct: 14 ECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 375 -YCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
R +T+L LI Y MGSL D+L L+ + L+I L A GLA+LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 433 -----PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV---TTVVAGTFGYLAP 484
P I HRD+KS NIL+ +N + ++D GLA + + GT Y+AP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 485 EYLQSG------RATEKSDVYSFGVLLLEL 508
E L + ++ D+++FG++L E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 317 DVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRG-- 374
+ VG G +G V+R G +I SR+ E EL ++H N++
Sbjct: 14 ECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 375 -YCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
R +T+L LI Y MGSL D+L L+ + L+I L A GLA+LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 433 -----PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV---TTVVAGTFGYLAP 484
P I HRD+KS NIL+ +N + ++D GLA + + GT Y+AP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 485 EYLQSG------RATEKSDVYSFGVLLLEL 508
E L + ++ D+++FG++L E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 39 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 150
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE--EAHVTTVVAGTFGYLAPEYL 487
IIHRD+K NILL+E++ ++DFG AK+L E +A + V GT Y++PE L
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELL 206
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
A++ SD+++ G ++ +LV G P
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 115 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 317 DVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRG-- 374
+ VG G +G V+R G +I SR+ E EL ++H N++
Sbjct: 43 ECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 375 -YCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
R +T+L LI Y MGSL D+L L+ + L+I L A GLA+LH +
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 433 -----PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV---TTVVAGTFGYLAP 484
P I HRD+KS NIL+ +N + ++D GLA + + GT Y+AP
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 485 EYLQSG------RATEKSDVYSFGVLLLEL 508
E L + ++ D+++FG++L E+
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 115
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 116 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVN 371
LD +G G G V + G AVK++D ++ ++ E+ I+ +H N+V
Sbjct: 31 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFL-HEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+ + ++ ++L G+L D + H +Q+ + L + L+ LH
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLHAQ 144
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+IHRDIKS +ILL + +SDFG V +E + GT ++APE +
Sbjct: 145 G---VIHRDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPELISRL 200
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
+ D++S G++++E+V G+ P
Sbjct: 201 PYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 115 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVN 371
LD +G G G V + G AVK++D ++ ++ E+ I+ +H N+V
Sbjct: 26 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFL-HEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+ + ++ ++L G+L D + H +Q+ + L + L+ LH
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLH-- 137
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+IHRDIKS +ILL + +SDFG V +E + GT ++APE +
Sbjct: 138 -AQGVIHRDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPELISRL 195
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
+ D++S G++++E+V G+ P
Sbjct: 196 PYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 17 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 74
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 75 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 128
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 129 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 115 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 301 YPSCEIIEKLEALDEEDV---VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER 356
YP I+ LD D+ +G+G FG V+R+ G FA K + E + +
Sbjct: 144 YPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK 203
Query: 357 ELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSL-DDFLHEHGEGQQLLNWSARLK 415
E++ + ++H LVNL ++IY+++S G L + EH + ++ ++
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVE 259
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILL--DENLEPHVSDFGLAKLLVDEEAHVTT 473
+GL ++H + +H D+K NI+ + E + DFGL L +++
Sbjct: 260 YMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--VK 314
Query: 474 VVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
V GT + APE + +D++S GVL L++G P
Sbjct: 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 115 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVN 371
LD +G G G V + G AVK++D ++ ++ E+ I+ +H N+V
Sbjct: 33 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFL-HEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+ + ++ ++L G+L D + H +Q+ + L + L+ LH
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLHAQ 146
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+IHRDIKS +ILL + +SDFG V +E + GT ++APE +
Sbjct: 147 G---VIHRDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPELISRL 202
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
+ D++S G++++E+V G+ P
Sbjct: 203 PYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 4 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 62
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 113
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 114 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 37 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 95 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 148
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 16 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 73
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 74 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 127
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 128 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 301 YPSCEIIEKLEALDEEDV---VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER 356
YP I+ LD D+ +G+G FG V+R+ G FA K + E + +
Sbjct: 38 YPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK 97
Query: 357 ELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSL-DDFLHEHGEGQQLLNWSARLK 415
E++ + ++H LVNL ++IY+++S G L + EH + ++ ++
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK----MSEDEAVE 153
Query: 416 IALGSARGLAYLHHDCCPKIIHRDIKSSNILL--DENLEPHVSDFGLAKLLVDEEAHVTT 473
+GL ++H + +H D+K NI+ + E + DFGL L +++
Sbjct: 154 YMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--VK 208
Query: 474 VVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
V GT + APE + +D++S GVL L++G P
Sbjct: 209 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 115 AGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 115
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 116 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 14 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 71
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 72 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 125
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 126 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 115
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 116 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 115
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 116 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 115
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 116 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G +G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 115 AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 39 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 150
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 15 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 72
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 73 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 126
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 127 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 39 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 150
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 40 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 98 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 151
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE--EAHVTTVVAGTFGYLAPEYL 487
IIHRD+K NILL+E++ ++DFG AK+L E +A + V GT Y++PE L
Sbjct: 152 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELL 207
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 37 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 95 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 148
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 37 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 95 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 148
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 149 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 39 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 150
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 42 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 99
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 100 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 153
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 154 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 39 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 150
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 40 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 98 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 151
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 152 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 319 VGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHIN---LVNLRG 374
+G G +G V +M G AVKRI R+ S + +++ S++ ++ V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ + + SLD F + + Q + KIA+ + L +LH
Sbjct: 74 ALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-- 130
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-----QS 489
+IHRD+K SN+L++ + + DFG++ LVD+ A + AG Y+APE + Q
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK--DIDAGCKPYMAPERINPELNQK 188
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
G + KSD++S G+ ++EL + P D W +L+ V+++
Sbjct: 189 GYSV-KSDIWSLGITMIELAILRFPYD-----------SWGTPF---QQLKQVVEEPSPQ 233
Query: 550 ADMETVEA-ILEIAARCTDANPDDRPSMNQVLQ 581
+ A ++ ++C N +RP+ +++Q
Sbjct: 234 LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVN 371
LD +G G G V + G AVK++D ++ ++ E+ I+ +H N+V
Sbjct: 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFL-HEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+ + ++ ++L G+L D + H +Q+ + L + L+ LH
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLHAQ 189
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+IHRDIKS +ILL + +SDFG V +E + GT ++APE +
Sbjct: 190 G---VIHRDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPELISRL 245
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
+ D++S G++++E+V G+ P
Sbjct: 246 PYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVN 371
LD +G G G V + G AVK++D ++ ++ E+ I+ +H N+V
Sbjct: 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFL-HEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+ + ++ ++L G+L D + H +Q+ + L + L+ LH
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA------AVCLAVLQALSVLHAQ 266
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+IHRDIKS +ILL + +SDFG V +E + GT ++APE +
Sbjct: 267 G---VIHRDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPELISRL 322
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
+ D++S G++++E+V G+ P
Sbjct: 323 PYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 39 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 150
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 151 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 21 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 78
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 79 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 132
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 133 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 36 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 94 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 147
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQ 488
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 148 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 143/317 (45%), Gaps = 39/317 (12%)
Query: 297 GDMPYPSCEIIEKLE--ALDEE-----DVVGSGGFGTVYR-MVMNDCGT---FAVK--RI 343
G +P S E+ KLE +D ++G G FG+V + + GT AVK ++
Sbjct: 13 GLVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKL 72
Query: 344 DRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATK-----LLIYDYLSMGSLDDFL 398
D S + + F E + H N++ L G C +++ ++I ++ G L +L
Sbjct: 73 DNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132
Query: 399 --HEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVS 456
G + + LK + A G+ YL + +HRD+ + N +L +++ V+
Sbjct: 133 LYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVA 189
Query: 457 DFGLAKLLVDEEAHVTTVVAGT-FGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPT 515
DFGL+K + + + +A ++A E L T KSDV++FGV + E+ T
Sbjct: 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
Query: 516 DPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPS 575
P G+ + LL +RL+ D C D + EI C +P DRP+
Sbjct: 250 YP-----GVQNHEMYDYLLHGHRLKQPED--CLD-------ELYEIMYSCWRTDPLDRPT 295
Query: 576 MNQVLQLLEQEVMSPCP 592
+ VL+L ++++ P
Sbjct: 296 FS-VLRLQLEKLLESLP 311
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRS---REGSDQVFERELEILGSIKHINLVN 371
++G G F TV ++ + T +A+K +++ +E RE +++ + H V
Sbjct: 36 ILGEGSFSTV--VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 372 LRGYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
L Y + L + Y G L ++ + G + +I L YLH
Sbjct: 94 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHG 147
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE--EAHVTTVVAGTFGYLAPEYL 487
IIHRD+K NILL+E++ ++DFG AK+L E +A + V GT Y++PE L
Sbjct: 148 KG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELL 203
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 306 IIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGS--DQVFERELEILG 362
++EK E + + +G G +G V++ D G A+K+ S + ++ RE+ +L
Sbjct: 1 MMEKYEKIGK---IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLK 57
Query: 363 SIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR 422
+KH NLVNL R L+++Y LHE Q+ + I + +
Sbjct: 58 QLKHPNLVNLLEVFRRKRRLHLVFEYCDHT----VLHELDRYQRGVPEHLVKSITWQTLQ 113
Query: 423 GLAYLH-HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
+ + H H+C IHRD+K NIL+ ++ + DFG A+LL + VA T Y
Sbjct: 114 AVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWY 168
Query: 482 LAPEYL----QSGRATEKSDVYSFGVLLLELVTG 511
+PE L Q G DV++ G + EL++G
Sbjct: 169 RSPELLVGDTQYGPPV---DVWAIGCVFAELLSG 199
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY +V ++ T A+K ++ + +++ F E ++ ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE------HGEGQQLLNWSARLKIALGSARGLA 425
L G L+I + ++ G L +L + + S +++A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG----- 480
YL+ + K +HRD+ + N ++ E+ + DFG+ + + + + + G G
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 205
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
+++PE L+ G T SDV+SFGV+L E+ T ++P +GL+ E L
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY------QGLS---------NEQVL 250
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
V++ D + + E+ C NP RPS +++ +++E M P
Sbjct: 251 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE-MEP 300
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 42/291 (14%)
Query: 319 VGSGGFGTVYR-----MVMNDCGT-FAVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY +V ++ T A+K ++ + +++ F E ++ ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE------HGEGQQLLNWSARLKIALGSARGLA 425
L G L+I + ++ G L +L + + S +++A A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG----- 480
YL+ + K +HRD+ + N ++ E+ + DFG+ + + + + + G G
Sbjct: 143 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 195
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRL 539
+++PE L+ G T SDV+SFGV+L E+ T ++P +GL+ E L
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY------QGLS---------NEQVL 240
Query: 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
V++ D + + E+ C NP RPS +++ +++E M P
Sbjct: 241 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE-MEP 290
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 96 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 150
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLNWMH 206
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 96 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 150
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLNWMH 206
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 17/220 (7%)
Query: 302 PSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFE---RE 357
PS +I K+E + ++G G FG V+ F A+K + + D E E
Sbjct: 9 PSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVE 68
Query: 358 LEILG-SIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
+L + +H L ++ + + +YL+ G L H + + S
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL----MYHIQSCHKFDLSRATFY 124
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK--LLVDEEAHVTTV 474
A GL +LH I++RD+K NILLD++ ++DFG+ K +L D + T
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNE 178
Query: 475 VAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
GT Y+APE L + D +SFGVLL E++ G+ P
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 96 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 150
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLNWMH 206
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNAMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 17/215 (7%)
Query: 303 SCEIIEKLEALDEEDVVGSGGFGTVYRMV-MNDCGTFAVKRI-----DRSREGSDQVFER 356
+ ++ + + ++ D +G G F TVY+ N A+K+I +++G ++ R
Sbjct: 2 ALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 357 ELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
E+++L + H N++ L + L++D++ L+ + ++ +L S
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNS---LVLTPSHIKAY 117
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVV 475
L + +GL YLH I+HRD+K +N+LLDEN ++DFGLAK A+ VV
Sbjct: 118 MLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 476 AGTFGYLAPEYLQSGRATEKS-DVYSFGVLLLELV 509
T Y APE L R D+++ G +L EL+
Sbjct: 175 --TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 318 VVGSGGFGT-VYRMVMNDCGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
++G G F T V + +A+K +++ +E RE +++ + H V L
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL- 95
Query: 374 GYCRLPATKLLIY--DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
Y + L + Y G L ++ + G + +I L YLH
Sbjct: 96 -YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGKG 150
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQSG 490
IIHRD+K NILL+E++ ++DFG AK+L E GT Y++PE L
Sbjct: 151 ---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
A + SD+++ G ++ +LV G P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 317 DVVGSGGFGTVYR--MVMNDCGTFAVKRID-RSREGSDQVFERELEILGSIKHINLVNLR 373
D +G G + TVY+ + D A+K I EG+ RE+ +L +KH N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
+ L+++YL L +L + G ++N RGLAY H
Sbjct: 67 DIIHTEKSLTLVFEYLD-KDLKQYLDDCG---NIINMHNVKLFLFQLLRGLAYCHRQ--- 119
Query: 434 KIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
K++HRD+K N+L++E E ++DFGLA+ + + + VV T Y P+ L S
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTD 177
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTDP 517
+ + D++ G + E+ TG RP P
Sbjct: 178 YSTQIDMWGVGCIFYEMATG-RPLFP 202
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 48 EVPERYQTLSP---VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRL 103
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PAT L ++ YL + L+ + Q+L + + I
Sbjct: 104 LKHMKHENVIGLLD-VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 161
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T
Sbjct: 162 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 214
Query: 479 FGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
Y APE + + + D++S G ++ EL+TG+
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA--------RGLAY 426
PA L ++ D +L H G L N K+ RGL Y
Sbjct: 89 -VFTPARSLEEFN-------DVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE- 485
+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGK 512
L + D++S G ++ EL+TG+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 150
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 211 KSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL + +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 148
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 209 KSIDIWSVGCILAEMLSN-RPIFP 231
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--AVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
+G G FG VY + F A+K + +S +EG + RE+EI + H N++ L
Sbjct: 31 LGKGKFGNVY-LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLY 89
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS--ARGLAYLHHDC 431
Y LI +Y G L + E Q+ + + + A L Y H
Sbjct: 90 NYFYDRRRIYLILEYAPRGEL------YKELQKSCTFDEQRTATIMEELADALMYCHGK- 142
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
K+IHRDIK N+LL E ++DFG + V + + GT YL PE ++
Sbjct: 143 --KVIHRDIKPENLLLGLKGELKIADFGWS---VHAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 492 ATEKSDVYSFGVLLLELVTGKRPTD 516
EK D++ GVL EL+ G P +
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVKRIDRSRE-GSDQVFERELEILGSIKH 366
+E D +G G G V ++ +N AVK +D R + ++E+ I + H
Sbjct: 5 VEDWDLVQTLGEGAAGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE-----HGEGQQLLNWSARLKIALGSA 421
N+V G+ R + L +Y S G L D + + Q+ +
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---------QLM 114
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFG 480
G+ YLH I HRDIK N+LLDE +SDFGLA + + + + GT
Sbjct: 115 AGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 481 YLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ E DV+S G++L ++ G+ P D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 317 DVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKH-INLVNLRG- 374
++VG+G +G VY+ G A ++ ++ ++E+ +L H N+ G
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 375 YCRLPATKL-----LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
+ + + L+ ++ GS+ D + W A I RGL++LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQ 147
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
K+IHRDIK N+LL EN E + DFG++ L D GT ++APE +
Sbjct: 148 H---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL-DRTVGRRNTFIGTPYWMAPEVIAC 203
Query: 490 GRATE-----KSDVYSFGVLLLELVTGKRP 514
+ KSD++S G+ +E+ G P
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 318 VVGSGGFGTVY------RMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVN 371
V+G G FG V V K I + +E + ER + +L ++KH LV
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV-LLKNVKHPFLVG 103
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L + + DY++ G L F H E + L AR A A L YLH
Sbjct: 104 LHFSFQTADKLYFVLDYINGGEL--FYHLQRE-RCFLEPRARF-YAAEIASALGYLH--- 156
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
I++RD+K NILLD ++DFGL K ++ + T+ GT YLAPE L
Sbjct: 157 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS-TTSTFCGTPEYLAPEVLHKQP 215
Query: 492 ATEKSDVYSFGVLLLELVTGKRP 514
D + G +L E++ G P
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 313 LDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHI---- 367
+E V+G G FG V + D +A+K+I + E + E+ +L S+ H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVR 66
Query: 368 ---------NLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
N V + +T + +Y +L D +H QQ + + L
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK--------LLVDEE-- 468
L+Y+H IIHRD+K NI +DE+ + DFGLAK L +D +
Sbjct: 127 ---EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 469 ---AHVTTVVAGTFGYLAPEYLQ-SGRATEKSDVYSFGVLLLELV 509
+ T GT Y+A E L +G EK D+YS G++ E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA--------RGLAY 426
PA L ++ D +L H G L N K+ RGL Y
Sbjct: 89 -VFTPARSLEEFN-------DVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE- 485
+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGK 512
L + D++S G ++ EL+TG+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 273
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 274 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 321
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS---DQVFE------RELEI 360
E + ++++G G V R + C +AVK ID + GS ++V E +E++I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 361 LGSIK-HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALG 419
L + H N++ L+ L++D + G L D+L E + L+ KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 132
Query: 420 SARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF 479
+ LH I+HRD+K NILLD+++ ++DFG + L + V GT
Sbjct: 133 LLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLRSVCGTP 187
Query: 480 GYLAPEYLQSGRAT------EKSDVYSFGVLLLELVTGKRP 514
YLAPE ++ ++ D++S GV++ L+ G P
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS---DQVFE------RELEI 360
E + ++++G G V R + C +AVK ID + GS ++V E +E++I
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 361 LGSIK-HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALG 419
L + H N++ L+ L++D + G L D+L E + L+ KI
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 119
Query: 420 SARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF 479
+ LH I+HRD+K NILLD+++ ++DFG + L + V GT
Sbjct: 120 LLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTP 174
Query: 480 GYLAPEYLQSGRAT------EKSDVYSFGVLLLELVTGKRP 514
YLAPE ++ ++ D++S GV++ L+ G P
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 17/220 (7%)
Query: 302 PSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFE---RE 357
PS +I K+E ++G G FG V+ F A+K + + D E E
Sbjct: 8 PSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVE 67
Query: 358 LEILG-SIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
+L + +H L ++ + + +YL+ G L H + + S
Sbjct: 68 KRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL----MYHIQSCHKFDLSRATFY 123
Query: 417 ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK--LLVDEEAHVTTV 474
A GL +LH I++RD+K NILLD++ ++DFG+ K +L D + T
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNX 177
Query: 475 VAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
GT Y+APE L + D +SFGVLL E++ G+ P
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 318 VVGSGGFGTVY--RMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGY 375
V+G G +G VY R + N A+K I Q E+ + +KH N+V G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQV-RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEH----GEGQQLLNWSARLKIALGSARGLAYLHHDC 431
+ + + GSL L + +Q + + + + GL YLH +
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDN- 141
Query: 432 CPKIIHRDIKSSNILLDENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+I+HRDIK N+L++ +SDFG +K L T GT Y+APE + G
Sbjct: 142 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKG 198
Query: 491 -RATEK-SDVYSFGVLLLELVTGKRP 514
R K +D++S G ++E+ TGK P
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 36/284 (12%)
Query: 318 VVGSGGFGTVYR-MVMNDCGTF---AVKRIDRSREGSDQV--FERELEILGSIKHINLVN 371
++G G FG+V + + G+F AVK + S + F RE + H ++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 372 L-------RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSAR--LKIALGSAR 422
L R RLP ++I ++ G L FL G+ N + ++ + A
Sbjct: 90 LVGVSLRSRAKGRLP-IPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGY 481
G+ YL IHRD+ + N +L E++ V+DFGL++ + + + + +
Sbjct: 149 GMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKW 205
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLE 540
LA E L T SDV++FGV + E++T G+ P G+ N L+ NRL+
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY------AGIENAEIYNYLIGGNRLK 259
Query: 541 DVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584
E +E + ++ +C A+P RPS + LE
Sbjct: 260 Q---------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ H N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 250
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 251 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 298
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 308 EKLEALDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSD-QVFERELEILGSIK 365
E L+ + + +G+GGF V G A+K +D++ GSD + E+E L +++
Sbjct: 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLR 66
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
H ++ L ++ +Y G L D++ Q L+ + +A
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYI----ISQDRLSEEETRVVFRQIVSAVA 122
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGL-AKLLVDEEAHVTTVVAGTFGYLAP 484
Y+H HRD+K N+L DE + + DFGL AK +++ H+ T G+ Y AP
Sbjct: 123 YVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAP 178
Query: 485 EYLQSGRAT--EKSDVYSFGVLLLELVTGKRPTD 516
E +Q G++ ++DV+S G+LL L+ G P D
Sbjct: 179 ELIQ-GKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLRGYC 376
+G G +G V + T A+K+I + Q RE++IL +H N++ +R
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R + + Y+ ++ L++ + QQL N RGL Y+H ++
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN-DHICYFLYQILRGLKYIH---SANVL 166
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+L++ + + DFGLA++ E H T T Y APE + + +
Sbjct: 167 HRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYT 226
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 227 KSIDIWSVGCILAEMLSN-RPIFP 249
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS---DQVFE------RELEI 360
E + ++++G G V R + C +AVK ID + GS ++V E +E++I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 361 LGSIK-HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALG 419
L + H N++ L+ L++D + G L D+L E + L+ KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 132
Query: 420 SARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF 479
+ LH I+HRD+K NILLD+++ ++DFG + L + V GT
Sbjct: 133 LLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTP 187
Query: 480 GYLAPEYLQSGRAT------EKSDVYSFGVLLLELVTGKRP 514
YLAPE ++ ++ D++S GV++ L+ G P
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 258
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 259 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 112/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ + H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 273
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 274 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 321
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 94 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 148
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 204
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 273
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 274 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 321
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 318 VVGSGGFGTVY--RMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGY 375
V+G G +G VY R + N A+K I Q E+ + +KH N+V G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQV-RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEH----GEGQQLLNWSARLKIALGSARGLAYLHHDC 431
+ + + GSL L + +Q + + + + GL YLH +
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDN- 127
Query: 432 CPKIIHRDIKSSNILLDE-NLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
+I+HRDIK N+L++ + +SDFG +K L T GT Y+APE + G
Sbjct: 128 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKG 184
Query: 491 -RATEK-SDVYSFGVLLLELVTGKRP 514
R K +D++S G ++E+ TGK P
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 317 DVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+ +G+G +G V G A+K+I + + REL+IL KH N++ ++
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 374 GYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
R P + Y+ + ++ LH+ Q L RGL Y+H
Sbjct: 121 DILR-PTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH--- 176
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD---EEAHVTTVVAGTFGYLAPEYLQ 488
++IHRD+K SN+L++EN E + DFG+A+ L E + T T Y APE +
Sbjct: 177 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 489 S-GRATEKSDVYSFGVLLLELVTGKR 513
S T+ D++S G + E++ ++
Sbjct: 237 SLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 16 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 71
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 72 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 129
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T
Sbjct: 130 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 182
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 28 EDGMTLLEIKSSLNDSRNLLGNWQATEESPCK--WTGISCHTHDQRVRSINLPYMQLGGI 85
+D LL+IK L + L +W T + C W G+ C T Q R NL L G+
Sbjct: 6 QDKQALLQIKKDLGNPTTL-SSWLPTTDC-CNRTWLGVLCDTDTQTYRVNNL---DLSGL 60
Query: 86 -------ISPSIGRLDKLQRLALHQ-NSLHGSIPNEITNCTELRALYLRANYLQGGIPAN 137
I S+ L L L + N+L G IP I T+L LY+ + G IP
Sbjct: 61 NLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF 120
Query: 138 IGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALS 189
+ + L LD S N+L G +P S+ L +L + N SG IPD +G+ S
Sbjct: 121 LSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFS 173
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 69/178 (38%), Gaps = 47/178 (26%)
Query: 74 SINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTEL-RALYLRANYLQG 132
+++ Y L G + PSI L L + N + G+IP+ + ++L ++ + N L G
Sbjct: 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG 188
Query: 133 GIPANIGNL------------------LF----------------------------LTI 146
IP NL LF L
Sbjct: 189 KIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNG 248
Query: 147 LDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNLDLCG 204
LDL +N + G +P L +L LH LN+S N GEIP G L F ++ N LCG
Sbjct: 249 LDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 258
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 259 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 96 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 150
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 206
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 95 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 149
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 205
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 112/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ + H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 259
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 260 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 307
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 146
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 207 KSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 146
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 147 HRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 207 KSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHG-EGQQLLNWSARLKIALGSARGLA 425
N+V L L++++LSM L DF+ G L + L L +GLA
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLL---QGLA 120
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFGYLAP 484
+ H +++HRD+K N+L++ ++DFGLA+ V + VV T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 485 EYLQSGRATEKS-DVYSFGVLLLELVTGK 512
E L + + D++S G + E+VT +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 146
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 207 KSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 317 DVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVN-LRGY 375
+++G G +G VY+ + D AVK + + + E+ + + ++H N+ + G
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFANR-QNFINEKNIYRVPLMEHDNIARFIVGD 76
Query: 376 CRLPA----TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
R+ A LL+ +Y GSL +L H +W + ++A RGLAYLH +
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTEL 131
Query: 432 C------PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV-------DEEAHVTTVVAGT 478
P I HRD+ S N+L+ + +SDFGL+ L EE + GT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 479 FGYLAPEYLQSG-------RATEKSDVYSFGVLLLEL 508
Y+APE L+ A ++ D+Y+ G++ E+
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 144
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 205 KSIDIWSVGCILAEMLSN-RPIFP 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 148
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 209 KSIDIWSVGCILAEMLSN-RPIFP 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 70
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 71 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 128
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 181
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 144
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 205 KSIDIWSVGCILAEMLSN-RPIFP 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 150
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 211 KSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 95 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 149
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 205
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 70
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 71 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 128
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 181
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 146
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 207 KSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 151
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 211
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 212 KSIDIWSVGCILAEMLSN-RPIFP 234
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 152
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 153 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 212
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 213 KSIDIWSVGCILAEMLSN-RPIFP 235
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 143
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 144 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 203
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 204 KSIDIWSVGCILAEMLSN-RPIFP 226
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 150
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 211 KSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL + +H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 148
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 149 HRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 209 KSIDIWSVGCILAEMLSN-RPIFP 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 94 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 148
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 204
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 87
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 88 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 142
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 143 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 198
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 199 YNQTVDIWSVGCIMAELLTGR 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 74
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 75 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 132
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGXVAT 185
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 100 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 154
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 155 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 210
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 211 YNQTVDIWSVGCIMAELLTGR 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 91 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 145
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 201
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 74
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 75 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 132
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 185
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 94 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 148
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 204
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ H N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 275
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 276 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 323
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 17 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 72
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 73 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 130
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T
Sbjct: 131 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 183
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHG-EGQQLLNWSARLKIALGSARGLA 425
N+V L L++++LSM L DF+ G L + L L +GLA
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLL---QGLA 119
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFGYLAP 484
+ H +++HRD+K N+L++ ++DFGLA+ V + VV T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 485 EYLQSGRATEKS-DVYSFGVLLLELVTGK 512
E L + + D++S G + E+VT +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 95 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 149
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 205
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 91 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 145
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 201
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 16 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 71
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 72 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 129
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T
Sbjct: 130 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 182
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 317 DVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+ +G+G +G V G A+K+I + + REL+IL KH N++ ++
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 374 GYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
R P + Y+ + ++ LH+ Q L RGL Y+H
Sbjct: 120 DILR-PTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH--- 175
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD---EEAHVTTVVAGTFGYLAPEYLQ 488
++IHRD+K SN+L++EN E + DFG+A+ L E + T T Y APE +
Sbjct: 176 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 489 S-GRATEKSDVYSFGVLLLELVTGKR 513
S T+ D++S G + E++ ++
Sbjct: 236 SLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 98
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 99 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 153
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 209
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 210 YNQTVDIWSVGCIMAELLTGR 230
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 91 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 145
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 201
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ H N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 265
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 266 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 313
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 166
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 227 KSIDIWSVGCILAEMLSN-RPIFP 249
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVK-----RIDRSREG-SDQVFERELEILGSIKHINLVN 371
+GSG F V + G +A K R+ SR G S + ERE+ IL I+H N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L +LI + +S G L DFL E ++ L + G+ YLH
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLH--- 132
Query: 432 CPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
+I H D+K NI LLD+N+ P + DFG+A + E + + GT ++APE +
Sbjct: 133 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIV 190
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
++D++S GV+ L++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 154
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 214
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 215 KSIDIWSVGCILAEMLSN-RPIFP 237
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 146
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 207 KSIDIWSVGCILAEMLSN-RPIFP 229
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSN-DHICYFLYQILRGLKYIH---SANVL 150
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 211 KSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 38 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 93
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 94 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 151
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T
Sbjct: 152 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 204
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 259
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 260 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 307
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 39 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRL 94
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 95 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 152
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 205
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 112 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 166
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 222
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 223 YNQTVDIWSVGCIMAELLTGR 243
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 32/221 (14%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 70
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS 420
L +KH N++ L PA L ++ D +L H G L N K+
Sbjct: 71 LKHMKHENVIGLLD-VFTPARSLEEFN-------DVYLVTHLMGADLNNIVKCAKLTDDH 122
Query: 421 A--------RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVT 472
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE
Sbjct: 123 VQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----M 175
Query: 473 TVVAGTFGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
T T Y APE L + D++S G ++ EL+TG+
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 39 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 94
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 95 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 152
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 205
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVK-----RIDRSREG-SDQVFERELEILGSIKHINLVN 371
+GSG F V + G +A K R+ SR G S + ERE+ IL I+H N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L +LI + +S G L DFL E ++ L + G+ YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLH--- 125
Query: 432 CPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
+I H D+K NI LLD+N+ P + DFG+A + E + + GT ++APE +
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIV 183
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
++D++S GV+ L++G P
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 101 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 155
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 211
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 212 YNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 101 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 155
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 211
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 212 YNQTVDIWSVGCIMAELLTGR 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 100 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 154
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 210
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 211 YNQTVDIWSVGCIMAELLTGR 231
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 38 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 93
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 94 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 151
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T T
Sbjct: 152 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 204
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
+GSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 94 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 148
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 204
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 70
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 71 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 128
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE A T
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----AT 181
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE A T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE A T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 259
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 260 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 307
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 91 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 145
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 146 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 201
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ H N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 299
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 300 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 95 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 149
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 150 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 205
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ H N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 285
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 286 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 333
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 35/288 (12%)
Query: 319 VGSGGFGTVYRM----VMNDCGTF--AVKRIDRSREGSDQV-FERELEILGSIKHINLVN 371
+G G FG VY + ND AVK + D++ F E I+ H N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIALGSARGLAYLH 428
G + ++ + ++ G L FL E L L +A A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 429 HDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TFGYLAP 484
+ IHRDI + N LL + DFG+A+ + + A ++ P
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--LEDV 542
E G T K+D +SFGVLL E+ + +G+M K N+ LE V
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS----------------LGYMPYPSKSNQEVLEFV 276
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590
D + I +C P+DRP+ +L+ +E P
Sbjct: 277 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 324
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSI--KHINLV-----N 371
+G G +G V+ M AVK + E S + RE EI ++ +H N++ +
Sbjct: 45 IGKGRYGEVW-MGKWRGEKVAVKVFFTTEEAS---WFRETEIYQTVLMRHENILGFIAAD 100
Query: 372 LRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
++G T+L LI DY GSL D+L L+ + LK+A S GL +LH +
Sbjct: 101 IKGTGSW--TQLYLITDYHENGSLYDYLK-----STTLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 431 CC-----PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV---TTVVAGTFGYL 482
P I HRD+KS NIL+ +N ++D GLA + + V GT Y+
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 483 APEYLQSG------RATEKSDVYSFGVLLLEL 508
PE L ++ +D+YSFG++L E+
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 37/220 (16%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRID-RSREGSDQVFERELEILGSIKHINLVN-LRG 374
+G GGFG V+ + ++DC +A+KRI +RE + + RE++ L ++H +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCN-YAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 71
Query: 375 YCRLPATKLL------IYDYLSMG-----SLDDFLHEHGEGQQLLNWSAR---LKIALGS 420
+ T+ L +Y Y+ M +L D+++ G+ + R L I L
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN----GRCTIEERERSVCLHIFLQI 127
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVV----- 475
A + +LH ++HRD+K SNI + V DFGL + +E T +
Sbjct: 128 AEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 476 ------AGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELV 509
GT Y++PE + + K D++S G++L EL+
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 300 PYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFER 356
P S E +E + +++ +G G +G VY+ G A+K R+D EG R
Sbjct: 2 PLGSPEFMENFQKVEK---IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR 58
Query: 357 ELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
E+ +L + H N+V L L++++L H + ++ ++ SA I
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGI 107
Query: 417 ALGSAR--------GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDE 467
L + GLA+ H +++HRD+K N+L++ ++DFGLA+ V
Sbjct: 108 PLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 164
Query: 468 EAHVTTVVAGTFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
+ VV T Y APE L + + D++S G + E+VT +
Sbjct: 165 RTYTHEVV--TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVK-----RIDRSREG-SDQVFERELEILGSIKHINLVN 371
+GSG F V + G +A K R+ SR G S + ERE+ IL I+H N++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L +LI + +S G L DFL E ++ L + G+ YLH
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLH--- 146
Query: 432 CPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
+I H D+K NI LLD+N+ P + DFG+A + E + + GT ++APE +
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIV 204
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
++D++S GV+ L++G P
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 315 EEDVVGSGGFGTVYR--MVMNDCGTFAVKRIDRSREGSDQVFEREL----EILGSIKHIN 368
E+ +GSG FGTV + M +I ++ E +D + EL ++ + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPY 79
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAY 426
+V + G C + +L+ + +G L+ +L + H + + ++ ++ + G+ Y
Sbjct: 80 IVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 132
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAP 484
L +HRD+ + N+LL +SDFGL+K L +E + G + + AP
Sbjct: 133 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 189
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
E + + + KSDV+SFGVL+ E + G++P
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 315 EEDVVGSGGFGTVYR--MVMNDCGTFAVKRIDRSREGSDQVFEREL----EILGSIKHIN 368
E+ +GSG FGTV + M +I ++ E +D + EL ++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPY 89
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAY 426
+V + G C + +L+ + +G L+ +L + H + + ++ ++ + G+ Y
Sbjct: 90 IVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 142
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAP 484
L +HRD+ + N+LL +SDFGL+K L +E + G + + AP
Sbjct: 143 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 199
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
E + + + KSDV+SFGVL+ E + G++P
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 315 EEDVVGSGGFGTVYR--MVMNDCGTFAVKRIDRSREGSDQVFEREL----EILGSIKHIN 368
E+ +GSG FGTV + M +I ++ E +D + EL ++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPY 89
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAY 426
+V + G C + +L+ + +G L+ +L + H + + ++ ++ + G+ Y
Sbjct: 90 IVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 142
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAP 484
L +HRD+ + N+LL +SDFGL+K L +E + G + + AP
Sbjct: 143 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 199
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
E + + + KSDV+SFGVL+ E + G++P
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 315 EEDVVGSGGFGTVYR--MVMNDCGTFAVKRIDRSREGSDQVFEREL----EILGSIKHIN 368
E+ +GSG FGTV + M +I ++ E +D + EL ++ + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPY 69
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAY 426
+V + G C + +L+ + +G L+ +L + H + + ++ ++ + G+ Y
Sbjct: 70 IVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 122
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAP 484
L +HRD+ + N+LL +SDFGL+K L +E + G + + AP
Sbjct: 123 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 179
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
E + + + KSDV+SFGVL+ E + G++P
Sbjct: 180 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 315 EEDVVGSGGFGTVYR--MVMNDCGTFAVKRIDRSREGSDQVFEREL----EILGSIKHIN 368
E+ +GSG FGTV + M +I ++ E +D + EL ++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPY 73
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAY 426
+V + G C + +L+ + +G L+ +L + H + + ++ ++ + G+ Y
Sbjct: 74 IVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 126
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAP 484
L +HRD+ + N+LL +SDFGL+K L +E + G + + AP
Sbjct: 127 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 183
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
E + + + KSDV+SFGVL+ E + G++P
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+++I + Q RE++IL +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 150
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 211 KSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 315 EEDVVGSGGFGTVYR--MVMNDCGTFAVKRIDRSREGSDQVFEREL----EILGSIKHIN 368
E+ +GSG FGTV + M +I ++ E +D + EL ++ + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPY 87
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAY 426
+V + G C + +L+ + +G L+ +L + H + + ++ ++ + G+ Y
Sbjct: 88 IVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 140
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAP 484
L +HRD+ + N+LL +SDFGL+K L +E + G + + AP
Sbjct: 141 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 197
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
E + + + KSDV+SFGVL+ E + G++P
Sbjct: 198 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + D+GLA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + YL + L++ + Q L N RGL Y+H ++
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 166
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV--TTVVAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H T T Y APE + + +
Sbjct: 167 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 227 KSIDIWSVGCILAEMLSN-RPIFP 249
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 319 VGSGGFGTVYRMVMNDCGTF-AVK--RIDRSREGSDQVFERELEILG---SIKHINLVNL 372
+G G +GTVY+ G F A+K R+ EG RE+ +L + +H N+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA--RGLAYLHHD 430
C T I L +D L + + A L RGL +LH +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
C I+HRD+K NIL+ ++DFGLA++ + A VV T Y APE L
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TLWYRAPEVLLQS 186
Query: 491 RATEKSDVYSFGVLLLELVTGK 512
D++S G + E+ K
Sbjct: 187 TYATPVDMWSVGCIFAEMFRRK 208
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 315 EEDVVGSGGFGTVYR--MVMNDCGTFAVKRIDRSREGSDQVFEREL----EILGSIKHIN 368
E+ +GSG FGTV + M +I ++ E +D + EL ++ + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPY 67
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAY 426
+V + G C + +L+ + +G L+ +L + H + + ++ ++ + G+ Y
Sbjct: 68 IVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 120
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAP 484
L +HRD+ + N+LL +SDFGL+K L +E + G + + AP
Sbjct: 121 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 177
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
E + + + KSDV+SFGVL+ E + G++P
Sbjct: 178 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 300 PYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFER 356
P S E +E + +++ +G G +G VY+ G A+K R+D EG R
Sbjct: 2 PLGSPEFMENFQKVEK---IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR 58
Query: 357 ELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKI 416
E+ +L + H N+V L L++++L H + ++ ++ SA I
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGI 107
Query: 417 ALGSAR--------GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDE 467
L + GLA+ H +++HRD+K N+L++ ++DFGLA+ V
Sbjct: 108 PLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 164
Query: 468 EAHVTTVVAGTFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
+ VV T Y APE L + + D++S G + E+VT +
Sbjct: 165 RTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 29/235 (12%)
Query: 298 DMPYPSCEIIEKLEA-LD------EEDVVGSGGFGTVYR--MVMNDCGTFAVKRIDRSRE 348
+ PY E I E LD E+ +GSG FGTV + M +I ++ E
Sbjct: 350 ESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-E 408
Query: 349 GSDQVFEREL----EILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE--HG 402
+D + EL ++ + + +V + G C + +L+ + +G L+ +L + H
Sbjct: 409 ANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHV 467
Query: 403 EGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462
+ + ++ ++ + G+ YL +HRD+ + N+LL +SDFGL+K
Sbjct: 468 KDKNIIELVHQVSM------GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 518
Query: 463 LLVDEEAHVTTVVAGTF--GYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
L +E + G + + APE + + + KSDV+SFGVL+ E + G++P
Sbjct: 519 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 315 EEDVVGSGGFGTVYR--MVMNDCGTFAVKRIDRSREGSDQVFEREL----EILGSIKHIN 368
E+ +GSG FGTV + M +I ++ E +D + EL ++ + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPY 431
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAY 426
+V + G C + +L+ + +G L+ +L + H + + ++ ++ + G+ Y
Sbjct: 432 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKY 484
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAP 484
L +HRD+ + N+LL +SDFGL+K L +E + G + + AP
Sbjct: 485 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 541
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
E + + + KSDV+SFGVL+ E + G++P
Sbjct: 542 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 317 DVVGS-GGFGTVYRMVMNDCGTFAV-KRIDRSREGSDQVFERELEILGSIKHINLVNLRG 374
+++G G FG VY+ + A K ID E + + E++IL S H N+V L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
++ ++ + G++D + E ++ L S + + L YLH + K
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---K 128
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
IIHRD+K+ NIL + + ++DFG++ GT ++APE + + +
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKD 188
Query: 495 -----KSDVYSFGVLLLELVTGKRP 514
K+DV+S G+ L+E+ + P
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 318 VVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
V+G+G FG V++ + + A+K++ + + + REL+I+ +KH N+V+L+ +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN----RELQIMRIVKHPNVVDLKAFFY 102
Query: 378 LPATKL------LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
K L+ +Y+ H Q + +L + R LAY+H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM-YQLLRSLAYIHSIG 161
Query: 432 CPKIIHRDIKSSNILLDENLEP----HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
I HRDIK N+LLD P + DFG AK+L+ E +V+ + + Y APE +
Sbjct: 162 ---ICHRDIKPQNLLLD---PPSGVLKLIDFGSAKILIAGEPNVSXICSRY--YRAPELI 213
Query: 488 -QSGRATEKSDVYSFGVLLLELVTGK 512
+ T D++S G ++ EL+ G+
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 35/225 (15%)
Query: 313 LDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHI---- 367
+E V+G G FG V + D +A+K+I + E + E+ +L S+ H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVXLLASLNHQYVVR 66
Query: 368 ---------NLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
N V + +T + +Y +L D +H QQ + + L
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK--------LLVDEE-- 468
L+Y+H IIHR++K NI +DE+ + DFGLAK L +D +
Sbjct: 127 ---EALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 469 ---AHVTTVVAGTFGYLAPEYLQ-SGRATEKSDVYSFGVLLLELV 509
+ T GT Y+A E L +G EK D YS G++ E +
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 13/202 (6%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAV-KRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G FG VY+ + A K ID E + + E++IL S H N+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIH 437
++ ++ + G++D + E ++ L S + + L YLH + KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 438 RDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE--- 494
RD+K+ NIL + + ++DFG++ + + GT ++APE + + +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSKDRPY 217
Query: 495 --KSDVYSFGVLLLELVTGKRP 514
K+DV+S G+ L+E+ + P
Sbjct: 218 DYKADVWSLGITLIEMAEIEPP 239
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 150
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV--VAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H + T Y APE + + +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 210
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 211 KSIDIWSVGCILAEMLSN-RPIFP 233
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRGYC 376
+G G +G V N + A+K+I + Q RE++IL +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
R P + + Y+ ++ L++ + Q L N RGL Y+H ++
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH---SANVL 151
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTV--VAGTFGYLAPEYLQSGRATE 494
HRD+K SN+LL+ + + DFGLA++ + H + T Y APE + + +
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 211
Query: 495 KS-DVYSFGVLLLELVTGKRPTDP 517
KS D++S G +L E+++ RP P
Sbjct: 212 KSIDIWSVGCILAEMLSN-RPIFP 234
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGL + DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 13/202 (6%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAV-KRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G FG VY+ + A K ID E + + E++IL S H N+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIH 437
++ ++ + G++D + E ++ L S + + L YLH + KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 438 RDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE--- 494
RD+K+ NIL + + ++DFG++ + + GT ++APE + + +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKDRPY 217
Query: 495 --KSDVYSFGVLLLELVTGKRP 514
K+DV+S G+ L+E+ + P
Sbjct: 218 DYKADVWSLGITLIEMAEIEPP 239
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 319 VGSGGFGTVYRMVMNDCGTF-AVK--RIDRSREGSDQVFERELEIL---GSIKHINLVNL 372
+G G +GTVY+ G F A+K R+ EG RE+ +L + +H N+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA--RGLAYLHHD 430
C T I L +D L + + A L RGL +LH +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
C I+HRD+K NIL+ ++DFGLA++ + A VV T Y APE L
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLWYRAPEVLLQS 186
Query: 491 RATEKSDVYSFGVLLLELVTGK 512
D++S G + E+ K
Sbjct: 187 TYATPVDMWSVGCIFAEMFRRK 208
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 319 VGSGGFGTVYRMVMNDCG-----TFAVKRIDR-SREG-SDQVFERELEILGSIKHINLVN 371
+GSG F V + G F KR R SR G S + ERE+ IL + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L +LI + +S G L DFL + ++ L+ G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLH--- 132
Query: 432 CPKIIHRDIKSSNI-LLDENLE-PHVS--DFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
KI H D+K NI LLD+N+ PH+ DFGLA + E+ + GT ++APE +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIV 190
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
++D++S GV+ L++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ + + + + + REL +L +KH N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 101 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 155
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T T Y APE L
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 211
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 212 YNQTVDIWSVGCIMAELLTGR 232
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 319 VGSGGFGTVYRMVMNDCG-----TFAVKRIDR-SREG-SDQVFERELEILGSIKHINLVN 371
+GSG F V + G F KR R SR G S + ERE+ IL + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L +LI + +S G L DFL + ++ L+ G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLH--- 132
Query: 432 CPKIIHRDIKSSNI-LLDENLE-PHVS--DFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
KI H D+K NI LLD+N+ PH+ DFGLA + E+ + GT ++APE +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIV 190
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
++D++S GV+ L++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 319 VGSGGFGTVYRMVMNDCG-----TFAVKRIDR-SREG-SDQVFERELEILGSIKHINLVN 371
+GSG F V + G F KR R SR G S + ERE+ IL + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L +LI + +S G L DFL + ++ L+ G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLH--- 132
Query: 432 CPKIIHRDIKSSNI-LLDENLE-PHVS--DFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
KI H D+K NI LLD+N+ PH+ DFGLA + E+ + GT ++APE +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIV 190
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
++D++S GV+ L++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 319 VGSGGFGTVYRMVMNDCG-----TFAVKRIDR-SREG-SDQVFERELEILGSIKHINLVN 371
+GSG F V + G F KR R SR G S + ERE+ IL + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L +LI + +S G L DFL + ++ L+ G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLH--- 132
Query: 432 CPKIIHRDIKSSNI-LLDENLE-PHVS--DFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
KI H D+K NI LLD+N+ PH+ DFGLA + E+ + GT ++APE +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIV 190
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
++D++S GV+ L++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 319 VGSGGFGTVYRMVMNDCG-----TFAVKRIDR-SREG-SDQVFERELEILGSIKHINLVN 371
+GSG F V + G F KR R SR G S + ERE+ IL + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L +LI + +S G L DFL + ++ L+ G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLH--- 132
Query: 432 CPKIIHRDIKSSNI-LLDENLE-PHVS--DFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
KI H D+K NI LLD+N+ PH+ DFGLA + E+ + GT ++APE +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIV 190
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
++D++S GV+ L++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++LSM + ++ ++ SA I L +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSM-----------DLKKFMDASALTGIPLPLIKSYLF 113
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++LSM + ++ ++ SA I L +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSM-----------DLKKFMDASALTGIPLPLIKSYLF 111
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 302 PSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRI--DRSREGSDQVFEREL 358
P C+ + K E L + +G G FG V++ G A+K++ + +EG RE+
Sbjct: 12 PFCDEVSKYEKLAK---IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 68
Query: 359 EILGSIKHINLVNLRGYCRLPATKL--------LIYDYLS---MGSLDDFLHEHGEGQQL 407
+IL +KH N+VNL CR A+ L++D+ G L + L +
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------- 121
Query: 408 LNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK---LL 464
S ++ GL Y+H + KI+HRD+K++N+L+ + ++DFGLA+ L
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLA 178
Query: 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVT 510
+ + + T Y PE L R D++ G ++ E+ T
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 318 VVGSGGFGTVYRMVMNDCG-TFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLR 373
V+G G FG V + + + FA+K +++ + F E ++L + + L
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQLLNWSARLKIALGSARGLAYLHHD 430
+ L+ DY G L L + + + + A + IA+ S L Y
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY---- 196
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS- 489
+HRDIK NIL+D N ++DFG L+++ ++V GT Y++PE LQ+
Sbjct: 197 -----VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 490 ----GRATEKSDVYSFGVLLLELVTGKRP 514
GR + D +S GV + E++ G+ P
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAV-KRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G FG VY+ + A K ID E + + E++IL S H N+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIH 437
++ ++ + G++D + E ++ L S + + L YLH + KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 438 RDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE--- 494
RD+K+ NIL + + ++DFG++ GT ++APE + + +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNT-RXIQRRDXFIGTPYWMAPEVVMCETSKDRPY 217
Query: 495 --KSDVYSFGVLLLELVTGKRP 514
K+DV+S G+ L+E+ + P
Sbjct: 218 DYKADVWSLGITLIEMAEIEPP 239
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 112 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 166
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DFGLA+ DE T Y APE L
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGYVATRWYRAPEIMLNWMH 222
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 223 YNQTVDIWSVGCIMAELLTGR 243
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 302 PSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRI--DRSREGSDQVFEREL 358
P C+ + K E L + +G G FG V++ G A+K++ + +EG RE+
Sbjct: 12 PFCDEVSKYEKLAK---IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 68
Query: 359 EILGSIKHINLVNLRGYCRLPATKL--------LIYDYLSMGSLDDFLHEHGEGQQLLNW 410
+IL +KH N+VNL CR A+ L++D+ EH L N
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFC----------EHDLAGLLSN- 117
Query: 411 SARLKIALGSAR--------GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462
+K L + GL Y+H + KI+HRD+K++N+L+ + ++DFGLA+
Sbjct: 118 -VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
Query: 463 ---LLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVT 510
L + + + T Y PE L R D++ G ++ E+ T
Sbjct: 174 AFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 302 PSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRI--DRSREGSDQVFEREL 358
P C+ + K E L + +G G FG V++ G A+K++ + +EG RE+
Sbjct: 11 PFCDEVSKYEKLAK---IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 67
Query: 359 EILGSIKHINLVNLRGYCRLPATKL--------LIYDYLSMGSLDDFLHEHGEGQQLLNW 410
+IL +KH N+VNL CR A+ L++D+ EH L N
Sbjct: 68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC----------EHDLAGLLSN- 116
Query: 411 SARLKIALGSAR--------GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462
+K L + GL Y+H + KI+HRD+K++N+L+ + ++DFGLA+
Sbjct: 117 -VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
Query: 463 ---LLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVT 510
L + + + T Y PE L R D++ G ++ E+ T
Sbjct: 173 AFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 415 KIALGSARGLAYLHHDCC-------PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE 467
+ AR + Y CC +I++RD+K NILLD++ +SD GLA +
Sbjct: 280 QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV--P 337
Query: 468 EAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E GT GY+APE +++ R T D ++ G LL E++ G+ P
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 415 KIALGSARGLAYLHHDCC-------PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE 467
+ AR + Y CC +I++RD+K NILLD++ +SD GLA +
Sbjct: 280 QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV--P 337
Query: 468 EAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E GT GY+APE +++ R T D ++ G LL E++ G+ P
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEI 360
E+ E+ + L VGSG +G+V G AVK++ R + + + + REL +
Sbjct: 39 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRL 94
Query: 361 LGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
L +KH N++ L PA L ++ YL + L+ + Q+L + + I
Sbjct: 95 LKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-Y 152
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DE T
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGXVAT 205
Query: 479 FGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
Y APE L + D++S G ++ EL+TG+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 302 PSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRI--DRSREGSDQVFEREL 358
P C+ + K E L + +G G FG V++ G A+K++ + +EG RE+
Sbjct: 12 PFCDEVSKYEKLAK---IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 68
Query: 359 EILGSIKHINLVNLRGYCRLPATKL--------LIYDYLSMGSLDDFLHEHGEGQQLLNW 410
+IL +KH N+VNL CR A+ L++D+ EH L N
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC----------EHDLAGLLSN- 117
Query: 411 SARLKIALGSAR--------GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462
+K L + GL Y+H + KI+HRD+K++N+L+ + ++DFGLA+
Sbjct: 118 -VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
Query: 463 ---LLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVT 510
L + + + T Y PE L R D++ G ++ E+ T
Sbjct: 174 AFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 315 EEDVVGSGGFGTVYR--MVMNDCGTFAVKRIDRSREGSDQVFEREL----EILGSIKHIN 368
E+ +GSG FGTV + M +I ++ E +D + EL ++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-EANDPALKDELLAEANVMQQLDNPY 73
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLAY 426
+V + G C + +L+ + +G L+ +L + H + + ++ ++ + G+ Y
Sbjct: 74 IVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKY 126
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF--GYLAP 484
L +HRD+ + N+LL +SDFGL+K L +E G + + AP
Sbjct: 127 LEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAP 183
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVT-GKRP 514
E + + + KSDV+SFGVL+ E + G++P
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 165
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 13/202 (6%)
Query: 319 VGSGGFGTVYRMVMNDCGTF-AVK--RIDRSREGSDQVFERELEIL---GSIKHINLVNL 372
+G G +GTVY+ G F A+K R+ EG RE+ +L + +H N+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA--RGLAYLHHD 430
C T I L +D L + + A L RGL +LH +
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
C I+HRD+K NIL+ ++DFGLA++ + A VV T Y APE L
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--TLWYRAPEVLLQS 186
Query: 491 RATEKSDVYSFGVLLLELVTGK 512
D++S G + E+ K
Sbjct: 187 TYATPVDMWSVGCIFAEMFRRK 208
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T +AGT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + + L DF+ E G Q+ L S ++ L + R
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 130
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 131 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 184
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 165
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 110 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 164
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 166
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 165
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 319 VGSGGFGTVYRMVMNDCG-----TFAVKRIDR-SREGS-DQVFERELEILGSIKHINLVN 371
+GSG F V + G F KR R SR G + ERE+ IL + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L +LI + +S G L DFL + E ++ +K L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILD---GVNYLH--- 132
Query: 432 CPKIIHRDIKSSNI-LLDENLE-PHVS--DFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
KI H D+K NI LLD+N+ PH+ DFGLA + E+ + GT ++APE +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIV 190
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
++D++S GV+ L++G P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 110 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 164
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 115 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 169
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+GSG FG V+R V G F K I+ + E+ I+ + H L+NL
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIH 437
+LI ++LS G L D + ++ + + + GL ++H I+H
Sbjct: 119 DKYEMVLILEFLSGGELFDRI---AAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVH 172
Query: 438 RDIKSSNILLDENLEPHVS--DFGLA-KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
DIK NI+ + V DFGLA KL DE VTT A + APE +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA---EFAAPEIVDREPVGF 229
Query: 495 KSDVYSFGVLLLELVTGKRP 514
+D+++ GVL L++G P
Sbjct: 230 YTDMWAIGVLGYVLLSGLSP 249
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 110 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 164
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 97/215 (45%), Gaps = 37/215 (17%)
Query: 319 VGSGGFGTVYRMVMNDCGT---FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGY 375
+GSG FG +M D T AVK I+R D+ +RE+ S++H N+V +
Sbjct: 28 IGSGNFGVA--RLMRDKLTKELVAVKYIERG-AAIDENVQREIINHRSLRHPNIVRFKEV 84
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGE---------GQQLLNWSARLKIALGSARGLAY 426
P +I +Y S G L + + G QQLL+ G++Y
Sbjct: 85 ILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS-------------GVSY 131
Query: 427 LHHDCCPKIIHRDIKSSNILLDENLEPH--VSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
H +I HRD+K N LLD + P + DFG +K V +TV GT Y+AP
Sbjct: 132 CH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAP 186
Query: 485 EYLQSGRATEK-SDVYSFGVLLLELVTGKRP-TDP 517
E L K +DV+S GV L ++ G P DP
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDP 221
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + FGLA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 34/222 (15%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF--------AVKRIDRSREG---SDQV 353
E+ ++L+ L VGSG +G+V C + AVK++ R + + +
Sbjct: 25 EVPQRLQGLRP---VGSGAYGSV-------CSAYDARLRQKVAVKKLSRPFQSLIHARRT 74
Query: 354 FERELEILGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWS 411
+ REL +L +KH N++ L PAT + + YL + L+ + Q L +
Sbjct: 75 Y-RELRLLKHLKHENVIGLLD-VFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEH 132
Query: 412 ARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV 471
+ + RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DEE +
Sbjct: 133 VQF-LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-QADEE--M 185
Query: 472 TTVVAGTFGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
T VA T Y APE L + D++S G ++ EL+ GK
Sbjct: 186 TGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVK-----RIDRSREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K R SR G S + ERE+ IL I+H
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSAR--LKIALGSARGL 424
N++ L +LI + ++ G L DFL E + L A LK L G+
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILN---GV 127
Query: 425 AYLHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFG 480
YLH +I H D+K NI LLD N+ +P + DFGLA + + + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPA 182
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
++APE + ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + DF LA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 115 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 169
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 26 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 85
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 86 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 141
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+DE V+DFG AK + T + GT YLAP
Sbjct: 142 EYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 194
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 195 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 393 SLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE 452
SLD F + + Q + KIA+ + L +LH +IHRD+K SN+L++ +
Sbjct: 118 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQ 175
Query: 453 PHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL-----QSGRATEKSDVYSFGVLLLE 507
DFG++ LVD+ A + AG Y APE + Q G + KSD++S G+ +E
Sbjct: 176 VKXCDFGISGYLVDDVAK--DIDAGCKPYXAPERINPELNQKGYSV-KSDIWSLGITXIE 232
Query: 508 LVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEA-ILEIAARCT 566
L + P D W +L+ V+++ + A ++ ++C
Sbjct: 233 LAILRFPYD-----------SWGTPF---QQLKQVVEEPSPQLPADKFSAEFVDFTSQCL 278
Query: 567 DANPDDRPSMNQVLQ 581
N +RP+ ++ Q
Sbjct: 279 KKNSKERPTYPELXQ 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + D GLA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 29/215 (13%)
Query: 311 EALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKHI 367
E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 368 NLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR----- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 423 ---GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGT 478
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV T
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--T 165
Query: 479 FGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
Y APE L + + D++S G + E+VT +
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 34/222 (15%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF--------AVKRIDRSREG---SDQV 353
E+ ++L+ L VGSG +G+V C + AVK++ R + + +
Sbjct: 17 EVPQRLQGLRP---VGSGAYGSV-------CSAYDARLRQKVAVKKLSRPFQSLIHARRT 66
Query: 354 FERELEILGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWS 411
+ REL +L +KH N++ L PAT + + YL + L+ + Q L +
Sbjct: 67 Y-RELRLLKHLKHENVIGLLD-VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH 124
Query: 412 ARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV 471
+ + RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DEE
Sbjct: 125 VQF-LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR-QADEE--- 176
Query: 472 TTVVAGTFGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
T T Y APE L + D++S G ++ EL+ GK
Sbjct: 177 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRM---VMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ + + R+D EG RE+ +L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 165
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRM---VMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ + + R+D EG RE+ +L + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 110 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 164
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRG 374
E +G G VYR +A+K + ++ + ++ E+ +L + H N++ L+
Sbjct: 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD--KKIVRTEIGVLLRLSHPNIIKLKE 115
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
P L+ + ++ G L D + E G + A +I +AYLH +
Sbjct: 116 IFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL----EAVAYLHEN---G 168
Query: 435 IIHRDIKSSNILL-----DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
I+HRD+K N+L D L+ ++DFGL+K++ E + V GT GY APE L+
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLK--IADFGLSKIV--EHQVLMKTVCGTPGYCAPEILRG 224
Query: 490 GRATEKSDVYSFGVLLLELVTGKRP 514
+ D++S G++ L+ G P
Sbjct: 225 CAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G GG G V+ V NDC A+K+I + S + RE++I+ + H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 378 LPATKLLIYDYLSMGSLDD--FLHEHGEGQ--------QLLNWSARLKIALGSARGLAYL 427
P+ L D S+ L+ + E+ E LL ARL RGL Y+
Sbjct: 79 -PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQLLRGLKYI 136
Query: 428 HHDCCPKIIHRDIKSSNILLD-ENLEPHVSDFGLAKLLVDEEAHVTTVVAG--TFGYLAP 484
H ++HRD+K +N+ ++ E+L + DFGLA+++ +H + G T Y +P
Sbjct: 137 H---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSP 193
Query: 485 EYLQS-GRATEKSDVYSFGVLLLELVTGK 512
L S T+ D+++ G + E++TGK
Sbjct: 194 RLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDR---SREGSDQVFERELEILGSIKHINLVNLRG 374
+G G FG V G A+K I++ ++ ERE+ L ++H +++ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ +Y D + +Q + R + SA + H K
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ---EARRFFQQIISAVEYCHRH-----K 123
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR--A 492
I+HRD+K N+LLDE+L ++DFGL+ ++ D T+ G+ Y APE + SG+ A
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-SGKLYA 180
Query: 493 TEKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L ++ + P D
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDR---SREGSDQVFERELEILGSIKHINLVNLRG 374
+G G FG V G A+K I++ ++ ERE+ L ++H +++ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ +Y D + +Q + R + SA + H K
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ---EARRFFQQIISAVEYCHRH-----K 133
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR--A 492
I+HRD+K N+LLDE+L ++DFGL+ ++ D T+ G+ Y APE + SG+ A
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-SGKLYA 190
Query: 493 TEKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L ++ + P D
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + D GLA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 33/213 (15%)
Query: 319 VGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+GSG FG M AVK I+R E D+ +RE+ S++H N+V +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERG-EKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGE---------GQQLLNWSARLKIALGSARGLAYLH 428
P ++ +Y S G L + + G QQL++ G++Y H
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------------GVSYCH 131
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPH--VSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
++ HRD+K N LLD + P + DFG +K V +TV GT Y+APE
Sbjct: 132 ---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEV 186
Query: 487 LQSGRATEK-SDVYSFGVLLLELVTGKRP-TDP 517
L K +DV+S GV L ++ G P DP
Sbjct: 187 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 219
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 159
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 160 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 213
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 158
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 159 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 212
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDR---SREGSDQVFERELEILGSIKHINLVNLRG 374
+G G FG V G A+K I++ ++ ERE+ L ++H +++ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ +Y D + +Q + R + SA + H K
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ---EARRFFQQIISAVEYCHRH-----K 132
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR--A 492
I+HRD+K N+LLDE+L ++DFGL+ ++ D T+ G+ Y APE + SG+ A
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-SGKLYA 189
Query: 493 TEKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L ++ + P D
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 173
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 174 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 227
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 158
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 159 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 212
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 60 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + +I L
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----F 175
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 176 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTPEYLAP 228
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 159
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 160 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 213
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 159
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 160 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 213
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 158
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 159 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 212
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDR---SREGSDQVFERELEILGSIKHINLVNLRG 374
+G G FG V G A+K I++ ++ ERE+ L ++H +++ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +++ +Y D + +Q + R + SA + H K
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ---EARRFFQQIISAVEYCHRH-----K 127
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR--A 492
I+HRD+K N+LLDE+L ++DFGL+ ++ D T+ G+ Y APE + SG+ A
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-SGKLYA 184
Query: 493 TEKSDVYSFGVLLLELVTGKRPTD 516
+ DV+S GV+L ++ + P D
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 307 IEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRI--DRSREGSDQVFERELEILGS 363
++K E L++ +G G +GTV++ + A+KR+ D EG RE+ +L
Sbjct: 1 MQKYEKLEK---IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE 57
Query: 364 IKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARG 423
+KH N+V L L++++ F +G+ + S ++ +G
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL----KG 113
Query: 424 LAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFGYL 482
L + H ++HRD+K N+L++ N E ++DFGLA+ + + VV T Y
Sbjct: 114 LGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYR 168
Query: 483 APEYLQSGRATEKS-DVYSFGVLLLELVTGKRPTDP 517
P+ L + S D++S G + EL RP P
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFP 204
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 145
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 146 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 199
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 145
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 146 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 199
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 158
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 159 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 212
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 159
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 160 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 213
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + + ++ SA I L +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKDFMDASALTGIPLPLIKSYLF 110
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 165
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + ++ ++ SA I L +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GL++ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 111 QLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 165
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 173
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 174 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 227
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 178
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 179 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 232
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L++++L H + + ++ SA I L +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-----------HQDLKTFMDASALTGIPLPLIKSYLF 113
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 146
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 147 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 200
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRG 374
VGSG +G+V G AVK++ R + + + + REL +L +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 375 YCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
PA L ++ YL + L+ + Q+L + + I RGL Y+H
Sbjct: 89 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE-YLQSGR 491
IIHRD+K SN+ ++E+ E + D GLA+ DE T T Y APE L
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE----MTGYVATRWYRAPEIMLNWMH 199
Query: 492 ATEKSDVYSFGVLLLELVTGK 512
+ D++S G ++ EL+TG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 146
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 147 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 200
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 146
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 147 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 200
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 33/290 (11%)
Query: 319 VGSGGFGTVYRMV-MNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYC- 376
+G GGF V + ++D +A+KRI + + +RE ++ H N++ L YC
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 377 RLPATK---LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
R K L+ + G+L + + + L L + LG RGL +H
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AK 153
Query: 434 KIIHRDIKSSNILLDENLEPHVSDFG---LAKLLVDEEAHVTTVVAG-----TFGYLAPE 485
HRD+K +NILL + +P + D G A + V+ T+ T Y APE
Sbjct: 154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213
Query: 486 YLQSGR---ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542
E++DV+S G +L ++ G+ P D F ++G +V L +N+L
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF-QKGDSV-----ALAVQNQLSIP 267
Query: 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCP 592
R + A + + +++ + +P RP + +L LE + P P
Sbjct: 268 QSPRHSSALWQLLNSMMTV-------DPHQRPHIPLLLSQLE-ALQPPAP 309
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 131
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 132 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 185
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 24/214 (11%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDR-----SREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K I + SR G S + ERE+ IL I+H
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSAR--LKIALGSARGL 424
N++ L +LI + ++ G L DFL E + L A LK L G+
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILN---GV 127
Query: 425 AYLHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFG 480
YLH +I H D+K NI LLD N+ +P + DFGLA + + + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
++APE + ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDR-----SREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K I + SR G S + ERE+ IL I+H
Sbjct: 14 DTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N++ L +LI + ++ G L DFL E ++ L + G+ Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYY 129
Query: 427 LHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYL 482
LH +I H D+K NI LLD N+ +P + DFGLA + + + + GT ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 184
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE + ++D++S GV+ L++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 165
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 166 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 219
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 131
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 132 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 185
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 131
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 132 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 185
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 34/222 (15%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF--------AVKRIDRSREG---SDQV 353
E+ ++L+ L VGSG +G+V C + AVK++ R + + +
Sbjct: 25 EVPQRLQGLRP---VGSGAYGSV-------CSAYDARLRQKVAVKKLSRPFQSLIHARRT 74
Query: 354 FERELEILGSIKHINLVNLRGYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWS 411
+ REL +L +KH N++ L PAT + + YL + L+ + Q L +
Sbjct: 75 Y-RELRLLKHLKHENVIGLLD-VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH 132
Query: 412 ARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHV 471
+ + RGL Y+H IIHRD+K SN+ ++E+ E + DFGLA+ DEE +
Sbjct: 133 VQF-LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-QADEE--M 185
Query: 472 TTVVAGTFGYLAPE-YLQSGRATEKSDVYSFGVLLLELVTGK 512
T VA T Y APE L + D++S G ++ EL+ GK
Sbjct: 186 TGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 33/213 (15%)
Query: 319 VGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G+G FG M AVK I+R E D+ +RE+ S++H N+V +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERG-EKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGE---------GQQLLNWSARLKIALGSARGLAYLH 428
P ++ +Y S G L + + G QQL++ G++Y H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------------GVSYAH 132
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPH--VSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
++ HRD+K N LLD + P ++DFG +K V + V GT Y+APE
Sbjct: 133 ---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV--GTPAYIAPEV 187
Query: 487 LQSGRATEK-SDVYSFGVLLLELVTGKRP-TDP 517
L K +DV+S GV L ++ G P DP
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDR-----SREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K I + SR G S + ERE+ IL I+H
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N++ L +LI + ++ G L DFL E ++ L + G+ Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYY 129
Query: 427 LHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYL 482
LH +I H D+K NI LLD N+ +P + DFGLA + + + + GT ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 184
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE + ++D++S GV+ L++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 60 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARF-YAAQIVLTF 175
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 176 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 228
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 126
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 127 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 180
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDR-----SREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K I + SR G S + ERE+ IL I+H
Sbjct: 13 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 72
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N++ L +LI + ++ G L DFL E ++ L + G+ Y
Sbjct: 73 PNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYY 128
Query: 427 LHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYL 482
LH +I H D+K NI LLD N+ +P + DFGLA + + + + GT ++
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 183
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE + ++D++S GV+ L++G P
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 34 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 93
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 94 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARF-YAAQIVLTF 149
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 150 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 202
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 203 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDR-----SREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K I + SR G S + ERE+ IL I+H
Sbjct: 13 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 72
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N++ L +LI + ++ G L DFL E ++ L + G+ Y
Sbjct: 73 PNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYY 128
Query: 427 LHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYL 482
LH +I H D+K NI LLD N+ +P + DFGLA + + + + GT ++
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 183
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE + ++D++S GV+ L++G P
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L+++ H H + + ++ SA I L +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFE-----------HVHQDLKTFMDASALTGIPLPLIKSYLF 109
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 110 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 164
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 126
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 127 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 180
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDR-----SREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K I + SR G S + ERE+ IL I+H
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N++ L +LI + ++ G L DFL E ++ L + G+ Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYY 129
Query: 427 LHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYL 482
LH +I H D+K NI LLD N+ +P + DFGLA + + + + GT ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 184
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE + ++D++S GV+ L++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 130
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 131 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 184
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 129
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 130 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 183
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDR-----SREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K I + SR G S + ERE+ IL I+H
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N++ L +LI + ++ G L DFL E ++ L + G+ Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYY 129
Query: 427 LHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYL 482
LH +I H D+K NI LLD N+ +P + DFGLA + + + + GT ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 184
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE + ++D++S GV+ L++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 24/214 (11%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDR-----SREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K I + SR G S + ERE+ IL I+H
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSAR--LKIALGSARGL 424
N++ L +LI + ++ G L DFL E + L A LK L G+
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILN---GV 127
Query: 425 AYLHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFG 480
YLH +I H D+K NI LLD N+ +P + DFGLA + + + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
++APE + ++D++S GV+ L++G P
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 155
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 208
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFAEPHARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDR-----SREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K I + SR G S + ERE+ IL I+H
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N++ L +LI + ++ G L DFL E ++ L + G+ Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYY 129
Query: 427 LHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYL 482
LH +I H D+K NI LLD N+ +P + DFGLA + + + + GT ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 184
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE + ++D++S GV+ L++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVK-----RIDRSREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K R SR G S + ERE+ IL I+H
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N++ L +LI + ++ G L DFL E ++ L + G+ Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYY 129
Query: 427 LHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYL 482
LH +I H D+K NI LLD N+ +P + DFGLA + + + + GT ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 184
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE + ++D++S GV+ L++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 289 STKLITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVM----NDCGTFAVKRID 344
+T+ + F G M + + + E ++ +G G FG V++ + N A+K
Sbjct: 16 TTENLYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK 75
Query: 345 RSREGSDQVFERELE---ILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEH 401
SD V E+ L+ + H ++V L G +I + ++G L FL
Sbjct: 76 NC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR 132
Query: 402 GEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461
+ L+ ++ + A + LAYL + +HRDI + N+L+ N + DFGL+
Sbjct: 133 ---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 186
Query: 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLE-LVTGKRP 514
+ + D + + ++APE + R T SDV+ FGV + E L+ G +P
Sbjct: 187 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 22/211 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 153
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 154 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 207
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRPTD 516
++ R +S V+S G+LL ++V G P +
Sbjct: 208 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDR-----SREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K I + SR G S + ERE+ IL I+H
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N++ L +LI + ++ G L DFL E ++ L + G+ Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYY 129
Query: 427 LHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYL 482
LH +I H D+K NI LLD N+ +P + DFGLA + + + + GT ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 184
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE + ++D++S GV+ L++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 34/273 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAV-KRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G FG VY+ + G A K I+ E + + E+EIL + H +V L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIH 437
++ ++ G++D + E G L + L +LH +IIH
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLH---SKRIIH 132
Query: 438 RDIKSSNILLDENLEPHVSDFGLA----KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
RD+K+ N+L+ + ++DFG++ K L ++ + GT ++APE +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETMK 187
Query: 494 E-----KSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548
+ K+D++S G+ L+E+ + P LN M LLK + + +
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPP------HHELNP---MRVLLKIAKSDPPTLLTPS 238
Query: 549 DADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581
+E L+IA D NP+ RPS Q+L+
Sbjct: 239 KWSVE-FRDFLKIA---LDKNPETRPSAAQLLE 267
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 114/274 (41%), Gaps = 38/274 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAV--KRIDRSREGSD-QVFERELEILGSIKHINLVNLRGY 375
+G G F TVY+ + + + DR S+ Q F+ E E L ++H N+V R Y
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV--RFY 91
Query: 376 CRLPATK------LLIYDYLSMGSLDDFLHEHG--EGQQLLNWSARLKIALGSARGLAYL 427
+T +L+ + + G+L +L + + L +W ++ +GL +L
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFL 145
Query: 428 HHDCCPKIIHRDIKSSNILLD-ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H P IIHRD+K NI + + D GLA L + A V GT + APE
Sbjct: 146 HTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEX 201
Query: 487 LQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKR 546
+ + E DVY+FG LE T + P N R+ + +
Sbjct: 202 YEE-KYDESVDVYAFGXCXLEXATSEYPYSEC-----------QNAAQIYRRVTSGV--K 247
Query: 547 CADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
A D + + EI C N D+R S+ +L
Sbjct: 248 PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 316 EDVVGSGGFGTVY----RMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVN 371
+ V+G G FG V ++ +C + + ++ + RE+++L + H N++
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L + L+ + + G L D + ++ +AR+ + S G+ Y+H +
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD--AARIIRQVLS--GITYMHKN- 151
Query: 432 CPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
KI+HRD+K N+LL+ ++ + DFGL+ E + GT Y+APE L
Sbjct: 152 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVLH 207
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
G EK DV+S GV+L L++G P
Sbjct: 208 -GTYDEKCDVWSTGVILYILLSGCPP 232
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGS--DQVFERELEILGSIKHINLVNLRGY 375
+G G F V R V G +A K I+ + + Q ERE I +KH N+V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 376 CRLPATKLLIYDYLSMGSL-DDFLHE--HGEG------QQLLNWSARLKIALGSARGLAY 426
LI+D ++ G L +D + + E QQ+L A
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE---------------AV 134
Query: 427 LHHDCCPK--IIHRDIKSSNILLDENLEP---HVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
LH C + ++HRD+K N+LL L+ ++DFGLA + V+ E AGT GY
Sbjct: 135 LH---CHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGY 190
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
L+PE L+ + D+++ GV+L L+ G P
Sbjct: 191 LSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 307 IEKLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSI- 364
I+ + + ++ +G G + R + FAVK ID+S+ + E+EIL
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE----EIEILLRYG 73
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
+H N++ L+ ++ + + G L D + Q+ + + + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR----QKFFSEREASAVLFTITKTV 129
Query: 425 AYLHHDCCPKIIHRDIKSSNIL-LDENLEP---HVSDFGLAKLLVDEEAHVTTVVAGTFG 480
YLH ++HRD+K SNIL +DE+ P + DFG AK L E + T T
Sbjct: 130 EYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TAN 185
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
++APE L+ D++S GVLL ++TG P
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDR-----SREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K I + SR G S + ERE+ IL I+H
Sbjct: 14 DTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N++ L +LI + ++ G L DFL E ++ L + G+ Y
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYY 129
Query: 427 LHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYL 482
LH +I H D+K NI LLD N+ +P + DFGLA + + + + GT ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 184
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE + ++D++S GV+ L++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 24/204 (11%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFE----RELEILGSIKHINLVNLR 373
VGSG +G+V + G A+K++ SR ++F REL +L ++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL--SRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 374 GYCRLPATKLL-IYD-YLSMGSLDDFLHEHGEGQQLLNWSAR--LKIALGSARGLAYLHH 429
PA+ L YD YL M F+ + L +S + +GL Y+H
Sbjct: 90 D-VFTPASSLRNFYDFYLVMP----FMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH- 143
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
++HRD+K N+ ++E+ E + DFGLA+ +A +T V T Y APE + S
Sbjct: 144 --SAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV-TRWYRAPEVILS 197
Query: 490 GRATEKS-DVYSFGVLLLELVTGK 512
++ D++S G ++ E++TGK
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 34/273 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAV-KRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+G G FG VY+ + G A K I+ E + + E+EIL + H +V L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIH 437
++ ++ G++D + E G L + L +LH +IIH
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLH---SKRIIH 140
Query: 438 RDIKSSNILLDENLEPHVSDFGLA----KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
RD+K+ N+L+ + ++DFG++ K L ++ + GT ++APE +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETMK 195
Query: 494 E-----KSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548
+ K+D++S G+ L+E+ + P LN M LLK + + +
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPP------HHELNP---MRVLLKIAKSDPPTLLTPS 246
Query: 549 DADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581
+E L+IA D NP+ RPS Q+L+
Sbjct: 247 KWSVE-FRDFLKIA---LDKNPETRPSAAQLLE 275
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 314 DEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDR-----SREG-SDQVFERELEILGSIKH 366
D + +GSG F V + G +A K I + SR G S + ERE+ IL I+H
Sbjct: 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAY 426
N++ L +LI + ++ G L DFL E ++ L + G+ Y
Sbjct: 74 PNVITLHEVYENKTDVILIGELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYY 129
Query: 427 LHHDCCPKIIHRDIKSSNI-LLDENL-EPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYL 482
LH +I H D+K NI LLD N+ +P + DFGLA + + + + GT ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 184
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE + ++D++S GV+ L++G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 318 VVGSGGFGTVY----RMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
V+G G FG V ++ +C + + ++ + RE+++L + H N++ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
+ L+ + + G L D + ++ +AR+ + S G+ Y+H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD--AARIIRQVLS--GITYMHKN--- 145
Query: 434 KIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
KI+HRD+K N+LL+ ++ + DFGL+ E + GT Y+APE L G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVLH-G 202
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
EK DV+S GV+L L++G P
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPP 226
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 118/248 (47%), Gaps = 30/248 (12%)
Query: 292 LITFHGDMPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVM--NDCGTFAVKRIDRS--- 346
+++ + ++ Y + + EK + +++ ++ + G ++++ D +A+K+ ++S
Sbjct: 9 ILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLE 68
Query: 347 ------REGSDQV--------FERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMG 392
+ +D++ F+ EL+I+ IK+ + G +IY+Y+
Sbjct: 69 KKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMEND 128
Query: 393 SL---DDFLHEHGEGQQLLNWSARLKIALGSA-RGLAYLHHDCCPKIIHRDIKSSNILLD 448
S+ D++ + +K + S +Y+H++ I HRD+K SNIL+D
Sbjct: 129 SILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMD 186
Query: 449 ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL--QSGRATEKSDVYSFGVLLL 506
+N +SDFG ++ +VD++ + GT+ ++ PE+ +S K D++S G+ L
Sbjct: 187 KNGRVKLSDFGESEYMVDKKIKGS---RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
Query: 507 ELVTGKRP 514
+ P
Sbjct: 244 VMFYNVVP 251
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFE----RELEILGSIKHINLVNLR 373
VGSG +G V V G A+K++ R + ++F REL +L ++H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS--ELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 374 GYCRLPATKLLIYDYL----SMGS-LDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
T D+ MG+ L + G+ + + + +GL Y+H
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-----LVYQMLKGLRYIH 145
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY-L 487
IIHRD+K N+ ++E+ E + DFGLA+ D E V T Y APE L
Sbjct: 146 ---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-QADSEMXGXVV---TRWYRAPEVIL 198
Query: 488 QSGRATEKSDVYSFGVLLLELVTGK 512
R T+ D++S G ++ E++TGK
Sbjct: 199 NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 318 VVGSGGFGTVYRMV-MNDCGTFAVKRIDRSR--------EGSDQVFERELEILGSIKHIN 368
++GSGGFG+VY + ++D A+K +++ R G+ E L S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 123
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 180
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 32/208 (15%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFE----RELEILGSIKHINLVNLR 373
VGSG +G+V + G A+K++ SR ++F REL +L ++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL--SRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 374 GYCRLPATKLL-IYD-YLSMGSLDDFLHE------HGEGQQLLNWSARLKIALGSARGLA 425
PA+ L YD YL M + L + E Q L + +GL
Sbjct: 108 D-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQM--------LKGLK 158
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
Y+H ++HRD+K N+ ++E+ E + DFGLA+ +A +T V T Y APE
Sbjct: 159 YIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV-TRWYRAPE 211
Query: 486 YLQSGRATEKS-DVYSFGVLLLELVTGK 512
+ S ++ D++S G ++ E++TGK
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+++D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 318 VVGSGGFGTVY----RMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
V+G G FG V ++ +C + + ++ + RE+++L + H N++ L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
+ L+ + + G L D + ++ +AR+ + S G+ Y+H +
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD--AARIIRQVLS--GITYMHKN--- 168
Query: 434 KIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
KI+HRD+K N+LL+ ++ + DFGL+ E + GT Y+APE L G
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVLH-G 225
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
EK DV+S GV+L L++G P
Sbjct: 226 TYDEKCDVWSTGVILYILLSGCPP 249
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 318 VVGSGGFGTVY----RMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
V+G G FG V ++ +C + + ++ + RE+++L + H N++ L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
+ L+ + + G L D + ++ +AR+ + S G+ Y+H +
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD--AARIIRQVLS--GITYMHKN--- 169
Query: 434 KIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
KI+HRD+K N+LL+ ++ + DFGL+ E + GT Y+APE L G
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVLH-G 226
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
EK DV+S GV+L L++G P
Sbjct: 227 TYDEKCDVWSTGVILYILLSGCPP 250
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ ++ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVM----NDCGTFAVKRIDRSREGSDQVFERELE---ILGSIKHINLVN 371
+G G FG V++ + N A+K SD V E+ L+ + H ++V
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L G +I + ++G L FL + L+ ++ + A + LAYL
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK- 130
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+ +HRDI + N+L+ N + DFGL++ + D + + ++APE + R
Sbjct: 131 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 492 ATEKSDVYSFGVLLLE-LVTGKRP 514
T SDV+ FGV + E L+ G +P
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 307 IEKLEALDEEDVVGSGGFGTVYRMVMNDCGTF-AVKRI--DRSREGSDQVFERELEILGS 363
++K E L++ +G G +GTV++ + A+KR+ D EG RE+ +L
Sbjct: 1 MQKYEKLEK---IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE 57
Query: 364 IKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARG 423
+KH N+V L L++++ F +G+ + S ++ +G
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL----KG 113
Query: 424 LAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAGTFGYL 482
L + H ++HRD+K N+L++ N E +++FGLA+ + + VV T Y
Sbjct: 114 LGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYR 168
Query: 483 APEYLQSGRATEKS-DVYSFGVLLLELVTGKRPTDP 517
P+ L + S D++S G + EL RP P
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 33/213 (15%)
Query: 319 VGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+GSG FG M AVK I+R + + V +RE+ S++H N+V +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANV-KREIINHRSLRHPNIVRFKEVIL 85
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEG---------QQLLNWSARLKIALGSARGLAYLH 428
P ++ +Y S G L + + G QQL++ G++Y H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------------GVSYCH 132
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPH--VSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
++ HRD+K N LLD + P + DFG +K V +TV GT Y+APE
Sbjct: 133 ---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEV 187
Query: 487 LQSGRATEK-SDVYSFGVLLLELVTGKRP-TDP 517
L K +DV+S GV L ++ G P DP
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G FA+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVM----NDCGTFAVKRIDRSREGSDQVFERELE---ILGSIKHINLVN 371
+G G FG V++ + N A+K SD V E+ L+ + H ++V
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L G +I + ++G L FL + L+ ++ + A + LAYL
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK- 130
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+ +HRDI + N+L+ N + DFGL++ + D + + ++APE + R
Sbjct: 131 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 492 ATEKSDVYSFGVLLLE-LVTGKRP 514
T SDV+ FGV + E L+ G +P
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 31/259 (11%)
Query: 333 NDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATK--LLIYDYLS 390
ND +K D S S F E L H N++ + G C+ P LI ++
Sbjct: 34 NDIVVKVLKVRDWSTRKSRD-FNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 391 MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDEN 450
GSL + LHE +++ S +K AL ARG+A+L H P I + S ++++DE+
Sbjct: 93 YGSLYNVLHEGTNF--VVDQSQAVKFALDMARGMAFL-HTLEPLIPRHALNSRSVMIDED 149
Query: 451 LEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA---TEKSDVYSFGVLLLE 507
+ +S K + ++APE LQ +D++SF VLL E
Sbjct: 150 MTARIS-MADVKFSFQSPGRMYAP-----AWVAPEALQKKPEDTNRRSADMWSFAVLLWE 203
Query: 508 LVTGKRP-TDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCT 566
LVT + P D + ++ G+ V LE + V +++I C
Sbjct: 204 LVTREVPFADLSNMEIGMKVA-----------LEG-LRPTIPPGISPHVSKLMKI---CM 248
Query: 567 DANPDDRPSMNQVLQLLEQ 585
+ +P RP + ++ +LE+
Sbjct: 249 NEDPAKRPKFDMIVPILEK 267
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G FA+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 319 VGSGGFGTVYRMVMND-CGTFAVKRIDRSREGS--DQVFERELEILGSIKHINLVNLRGY 375
+G G F V R V +A K I+ + + Q ERE I +KH N+V L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 376 CRLPATKLLIYDYLSMGSL-DDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
L++D ++ G L +D + E + S + L S + HD
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIHQILESVNHIH--QHD---- 150
Query: 435 IIHRDIKSSNILLDENLEP---HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
I+HRD+K N+LL + ++DFGLA + V E AGT GYL+PE L+
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 492 ATEKSDVYSFGVLLLELVTGKRP 514
+ D+++ GV+L L+ G P
Sbjct: 210 YGKPVDIWACGVILYILLVGYPP 232
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G FA+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVM----NDCGTFAVKRIDRSREGSDQVFERELE---ILGSIKHINLVN 371
+G G FG V++ + N A+K SD V E+ L+ + H ++V
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L G +I + ++G L FL + L+ ++ + A + LAYL
Sbjct: 81 LIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK- 135
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+ +HRDI + N+L+ N + DFGL++ + D + + ++APE + R
Sbjct: 136 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 492 ATEKSDVYSFGVLLLE-LVTGKRP 514
T SDV+ FGV + E L+ G +P
Sbjct: 194 FTSASDVWMFGVCMWEILMHGVKP 217
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVM----NDCGTFAVKRIDRSREGSDQVFERELE---ILGSIKHINLVN 371
+G G FG V++ + N A+K SD V E+ L+ + H ++V
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L G +I + ++G L FL + L+ ++ + A + LAYL
Sbjct: 73 LIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK- 127
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+ +HRDI + N+L+ N + DFGL++ + D + + ++APE + R
Sbjct: 128 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 492 ATEKSDVYSFGVLLLE-LVTGKRP 514
T SDV+ FGV + E L+ G +P
Sbjct: 186 FTSASDVWMFGVCMWEILMHGVKP 209
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 345 RSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATK--LLIYDYLSMGSLDDF--LHE 400
+ R +QV++ E+ IL + H N+V L P ++++ ++ G + + L
Sbjct: 75 QPRGPIEQVYQ-EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133
Query: 401 HGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGL 460
E Q + +K G+ YLH+ KIIHRDIK SN+L+ E+ ++DFG+
Sbjct: 134 LSEDQARFYFQDLIK-------GIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGV 183
Query: 461 AKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR---ATEKSDVYSFGVLLLELVTGKRP 514
+ +A ++ V GT ++APE L R + + DV++ GV L V G+ P
Sbjct: 184 SNEFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVM----NDCGTFAVKRIDRSREGSDQVFERELE---ILGSIKHINLVN 371
+G G FG V++ + N A+K SD V E+ L+ + H ++V
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L G +I + ++G L FL + L+ ++ + A + LAYL
Sbjct: 79 LIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK- 133
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+ +HRDI + N+L+ N + DFGL++ + D + + ++APE + R
Sbjct: 134 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 492 ATEKSDVYSFGVLLLE-LVTGKRP 514
T SDV+ FGV + E L+ G +P
Sbjct: 192 FTSASDVWMFGVCMWEILMHGVKP 215
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVM----NDCGTFAVKRIDRSREGSDQVFERELE---ILGSIKHINLVN 371
+G G FG V++ + N A+K SD V E+ L+ + H ++V
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L G +I + ++G L FL + L+ ++ + A + LAYL
Sbjct: 78 LIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK- 132
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+ +HRDI + N+L+ N + DFGL++ + D + + ++APE + R
Sbjct: 133 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 190
Query: 492 ATEKSDVYSFGVLLLE-LVTGKRP 514
T SDV+ FGV + E L+ G +P
Sbjct: 191 FTSASDVWMFGVCMWEILMHGVKP 214
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSI-KHINLVNLR 373
++ +G G + R V +AVK ID+S+ + E+EIL +H N++ L+
Sbjct: 32 KETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE----EIEILLRYGQHPNIITLK 87
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
L+ + + G L D + Q+ + + + + YLH
Sbjct: 88 DVYDDGKHVYLVTELMRGGELLDKILR----QKFFSEREASFVLHTIGKTVEYLHSQ--- 140
Query: 434 KIIHRDIKSSNIL-LDENLEPH---VSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
++HRD+K SNIL +DE+ P + DFG AK L E + T T ++APE L+
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKR 199
Query: 490 GRATEKSDVYSFGVLLLELVTGKRP 514
E D++S G+LL ++ G P
Sbjct: 200 QGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 318 VVGSGGFGTVY----RMVMNDCGTFAVKRIDRS--REGSDQVFERELEILGSIKHINLVN 371
++G G FG V R+ + +AVK I+++ + RE+E+L + H N++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQE---YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L ++ ++ + + G L D + + + + +AR+ + S G+ Y+H
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE--HDAARIIKQVFS--GITYMHKH- 140
Query: 432 CPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
I+HRD+K NILL+ ++ + + DFGL+ + GT Y+APE L+
Sbjct: 141 --NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVLR 196
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
G EK DV+S GV+L L++G P
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 318 VVGSGGFGTVY----RMVMNDCGTFAVKRIDRS--REGSDQVFERELEILGSIKHINLVN 371
++G G FG V R+ + +AVK I+++ + RE+E+L + H N++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQE---YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L ++ ++ + + G L D + + + + +AR+ + S G+ Y+H
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE--HDAARIIKQVFS--GITYMHKH- 140
Query: 432 CPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
I+HRD+K NILL+ ++ + + DFGL+ + GT Y+APE L+
Sbjct: 141 --NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVLR 196
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
G EK DV+S GV+L L++G P
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 36/221 (16%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRI-DRSREGSD-QVFERELEILGSIK-HINLVNLRG 374
+G G +G V++ + G AVK+I D + +D Q RE+ IL + H N+VNL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 375 YCRLPATK--LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
R + L++DY+ LH +L + + + + YLH
Sbjct: 77 VLRADNDRDVYLVFDYMETD-----LHAVIRAN-ILEPVHKQYVVYQLIKVIKYLH---S 127
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV--------------------DEEAHVT 472
++HRD+K SNILL+ V+DFGL++ V D++ +
Sbjct: 128 GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 473 TVVAGTFGYLAPEY-LQSGRATEKSDVYSFGVLLLELVTGK 512
T T Y APE L S + T+ D++S G +L E++ GK
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 304 CEIIEKLEALDEEDVVGSGGFGTVYRMV-MNDCGTF-AVKRI--DRSREGSDQVFERELE 359
C ++ E + E +G G +G V++ + + G F A+KR+ EG RE+
Sbjct: 7 CRADQQYECVAE---IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 360 IL---GSIKHINLVNLRGYCRLP----ATKL-LIYDYLS--MGSLDDFLHEHGEGQQLLN 409
+L + +H N+V L C + TKL L+++++ + + D + E G + +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 410 WSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA 469
+ RGL +LH +++HRD+K NIL+ + + ++DFGLA++ + A
Sbjct: 124 -----DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 470 HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGK 512
+ VV T Y APE L D++S G + E+ K
Sbjct: 176 LTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSI-KHINLVNLR 373
++ +G G + R V +AVK ID+S+ + E+EIL +H N++ L+
Sbjct: 32 KETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE----EIEILLRYGQHPNIITLK 87
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
L+ + + G L D + Q+ + + + + YLH
Sbjct: 88 DVYDDGKHVYLVTELMRGGELLDKILR----QKFFSEREASFVLHTIGKTVEYLHSQ--- 140
Query: 434 KIIHRDIKSSNIL-LDENLEPH---VSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
++HRD+K SNIL +DE+ P + DFG AK L E + T T ++APE L+
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKR 199
Query: 490 GRATEKSDVYSFGVLLLELVTGKRP 514
E D++S G+LL ++ G P
Sbjct: 200 QGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYL 482
GL +LH II+RD+K N+LLD++ +SD GLA L + T AGT G++
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFM 356
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542
APE L D ++ GV L E++ + P F RG V N LK+ LE
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGP----FRARGEKV---ENKELKQRVLEQA 409
Query: 543 ID--KRCADADMETVEAILE 560
+ + + A + EA+L+
Sbjct: 410 VTYPDKFSPASKDFCEALLQ 429
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYL 482
GL +LH II+RD+K N+LLD++ +SD GLA L + T AGT G++
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFM 356
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542
APE L D ++ GV L E++ + P F RG V N LK+ LE
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGP----FRARGEKV---ENKELKQRVLEQA 409
Query: 543 ID--KRCADADMETVEAILE 560
+ + + A + EA+L+
Sbjct: 410 VTYPDKFSPASKDFCEALLQ 429
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 47/284 (16%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVF---ERELEIL-GSIKHINLVN 371
+DV+G G GT+ M D AVKRI + F +RE+++L S +H N++
Sbjct: 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRI------LPECFSFADREVQLLRESDEHPNVI- 81
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSAR-LKIALGSARGLAYLHHD 430
R +C K + Y+++ L E+ E + + + + + GLA+LH
Sbjct: 82 -RYFC---TEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH-- 135
Query: 431 CCPKIIHRDIKSSNILLD-----ENLEPHVSDFGLAKLLVDEEAHVT--TVVAGTFGYLA 483
I+HRD+K NIL+ ++ +SDFGL K L + + V GT G++A
Sbjct: 136 -SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 484 PEYLQSG---RATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTL--LKEN 537
PE L T D++S G + +++ G P + ++R N++ +L L
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS-LQRQANILLGACSLDCLHPE 253
Query: 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581
+ EDVI + E +E ++ + +P RPS VL+
Sbjct: 254 KHEDVIAR-------ELIEKMIAM-------DPQKRPSAKHVLK 283
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYL 482
GL +LH II+RD+K N+LLD++ +SD GLA L + T AGT G++
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFM 356
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542
APE L D ++ GV L E++ + P F RG V N LK+ LE
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGP----FRARGEKV---ENKELKQRVLEQA 409
Query: 543 ID--KRCADADMETVEAILE 560
+ + + A + EA+L+
Sbjct: 410 VTYPDKFSPASKDFCEALLQ 429
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 318 VVGSGGFGTVY----RMVMNDCGTFAVKRIDRS--REGSDQVFERELEILGSIKHINLVN 371
++G G FG V R+ + +AVK I+++ + RE+E+L + H N++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQE---YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L ++ ++ + + G L D + + + + +AR+ + S G+ Y+H
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE--HDAARIIKQVFS--GITYMHK-- 139
Query: 432 CPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
I+HRD+K NILL+ ++ + + DFGL+ + GT Y+APE L+
Sbjct: 140 -HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVLR 196
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
G EK DV+S GV+L L++G P
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 208 AIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYL 482
GL +LH II+RD+K N+LLD++ +SD GLA L + T AGT G++
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFM 356
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542
APE L D ++ GV L E++ + P F RG V N LK+ LE
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGP----FRARGEKV---ENKELKQRVLEQA 409
Query: 543 ID--KRCADADMETVEAILE 560
+ + + A + EA+L+
Sbjct: 410 VTYPDKFSPASKDFCEALLQ 429
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVM----NDCGTFAVKRIDRSREGSDQVFERELE---ILGSIKHINLVN 371
+G G FG V++ + N A+K SD V E+ L+ + H ++V
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L G +I + ++G L FL L+ ++ + A + LAYL
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLESK- 130
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+ +HRDI + N+L+ N + DFGL++ + D + ++APE + R
Sbjct: 131 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRR 188
Query: 492 ATEKSDVYSFGVLLLE-LVTGKRP 514
T SDV+ FGV + E L+ G +P
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 94/213 (44%), Gaps = 33/213 (15%)
Query: 319 VGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+GSG FG M AVK I+R E D+ +RE+ S++H N+V +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERG-EKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGE---------GQQLLNWSARLKIALGSARGLAYLH 428
P ++ +Y S G L + + G QQL++ G++Y H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-------------GVSYCH 132
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPH--VSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
++ HRD+K N LLD + P + FG +K V +TV GT Y+APE
Sbjct: 133 ---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV--GTPAYIAPEV 187
Query: 487 LQSGRATEK-SDVYSFGVLLLELVTGKRP-TDP 517
L K +DV+S GV L ++ G P DP
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 156
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 28/220 (12%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCG--TFAVK---RIDRSREGSDQVFERELEILGS 363
K E D V+G G FG V ++V + +A+K + + + F E +I+
Sbjct: 73 KAEDYDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 131
Query: 364 IKHINLVNLRGYCRLPATKLL--IYDYLSMGSLDDFLHEHGEGQQLLN-WSARLKIALGS 420
+V L +C K L + +Y+ G L + + + ++ ++A + +AL +
Sbjct: 132 ANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDA 189
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA--HVTTVVAGT 478
+ +IHRD+K N+LLD++ ++DFG + +DE H T V GT
Sbjct: 190 IHSMG---------LIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCDTAV-GT 238
Query: 479 FGYLAPEYLQS----GRATEKSDVYSFGVLLLELVTGKRP 514
Y++PE L+S G + D +S GV L E++ G P
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 148
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 149 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 201
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARF-YAAQIVLTFE 148
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 149 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 201
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 304 CEIIEKLEALDEEDVVGSGGFGTVYRMV-MNDCGTF-AVKRI--DRSREGSDQVFERELE 359
C ++ E + E +G G +G V++ + + G F A+KR+ EG RE+
Sbjct: 7 CRADQQYECVAE---IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 360 ILG---SIKHINLVNLRGYCRLP----ATKL-LIYDYLS--MGSLDDFLHEHGEGQQLLN 409
+L + +H N+V L C + TKL L+++++ + + D + E G + +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 410 WSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA 469
+ RGL +LH +++HRD+K NIL+ + + ++DFGLA++ + A
Sbjct: 124 -----DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 470 HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGK 512
+ VV T Y APE L D++S G + E+ K
Sbjct: 176 LTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 156
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 307 IEKLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFERELEILGSI- 364
I+ + + ++ +G G + R + FAVK ID+S+ + E+EIL
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTE----EIEILLRYG 73
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
+H N++ L+ ++ + G L D + Q+ + + + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILR----QKFFSEREASAVLFTITKTV 129
Query: 425 AYLHHDCCPKIIHRDIKSSNIL-LDENLEPH---VSDFGLAKLLVDEEAHVTTVVAGTFG 480
YLH ++HRD+K SNIL +DE+ P + DFG AK L E + T T
Sbjct: 130 EYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TAN 185
Query: 481 YLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
++APE L+ D++S GVLL +TG P
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 304 CEIIEKLEALDEEDVVGSGGFGTVYRMV-MNDCGTF-AVKRI--DRSREGSDQVFERELE 359
C ++ E + E +G G +G V++ + + G F A+KR+ EG RE+
Sbjct: 7 CRADQQYECVAE---IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 360 ILG---SIKHINLVNLRGYCRLP----ATKL-LIYDYLS--MGSLDDFLHEHGEGQQLLN 409
+L + +H N+V L C + TKL L+++++ + + D + E G + +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 410 WSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA 469
+ RGL +LH +++HRD+K NIL+ + + ++DFGLA++ + A
Sbjct: 124 -----DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 470 HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGK 512
+ VV T Y APE L D++S G + E+ K
Sbjct: 176 LTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 156
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVM----NDCGTFAVKRIDRSREGSDQVFERELE---ILGSIKHINLVN 371
+G G FG V++ + N A+K SD V E+ L+ + H ++V
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L G +I + ++G L FL L+ ++ + A + LAYL
Sbjct: 456 LIGVITENPV-WIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLESK- 510
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+ +HRDI + N+L+ N + DFGL++ + D + + ++APE + R
Sbjct: 511 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 492 ATEKSDVYSFGVLLLE-LVTGKRP 514
T SDV+ FGV + E L+ G +P
Sbjct: 569 FTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + +I L
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 176
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 177 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 229
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVK--RIDRSREGSDQVFERELEILGSIKH 366
+E + + +G G +G VY+ G A+K R+D EG RE+ +L + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 367 INLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR---- 422
N+V L L+++ H + ++ ++ SA I L +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFE-----------HVDQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 423 ----GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL-VDEEAHVTTVVAG 477
GLA+ H +++HRD+K N+L++ ++DFGLA+ V + VV
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 478 TFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGK 512
T Y APE L + + D++S G + E+VT +
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFE----RELEILGSIKHINLV 370
+ ++G G +G V G A+K+I+ +F RE++IL KH N++
Sbjct: 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKILKHFKHENII 72
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+ R + + Y+ + LH Q L + + I + R + LH
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVLHGS 131
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG----------TFG 480
+IHRD+K SN+L++ N + V DFGLA+ ++DE A + G T
Sbjct: 132 ---NVIHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGMTEXVATRW 187
Query: 481 YLAPE-YLQSGRATEKSDVYSFGVLLLELVTGKRPTDP 517
Y APE L S + + DV+S G +L EL +RP P
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFP 224
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 318 VVGSGGFGTVY----RMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLR 373
V+G G FG V ++ +C + + ++ + RE+++L + H N+ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
+ L+ + + G L D + ++ +AR+ + S G+ Y H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD--AARIIRQVLS--GITYXHKN--- 145
Query: 434 KIIHRDIKSSNILLD---ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG 490
KI+HRD+K N+LL+ ++ + DFGL+ E + GT Y+APE L G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKIGTAYYIAPEVLH-G 202
Query: 491 RATEKSDVYSFGVLLLELVTGKRP 514
EK DV+S GV+L L++G P
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPP 226
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFE----RELEILGSIKHINLV 370
+ ++G G +G V G A+K+I+ +F RE++IL KH N++
Sbjct: 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKILKHFKHENII 72
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+ R + + Y+ + LH Q L + + I + R + LH
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVLHGS 131
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG----------TFG 480
+IHRD+K SN+L++ N + V DFGLA+ ++DE A + G T
Sbjct: 132 ---NVIHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGMVEFVATRW 187
Query: 481 YLAPE-YLQSGRATEKSDVYSFGVLLLELVTGKRPTDP 517
Y APE L S + + DV+S G +L EL +RP P
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFP 224
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFE----RELEILGSIKHINLV 370
+ ++G G +G V G A+K+I+ +F RE++IL KH N++
Sbjct: 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKILKHFKHENII 72
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
+ R + + Y+ + LH Q L + + I + R + LH
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI-YQTLRAVKVLHGS 131
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG----------TFG 480
+IHRD+K SN+L++ N + V DFGLA+ ++DE A + G T
Sbjct: 132 ---NVIHRDLKPSNLLINSNCDLKVCDFGLAR-IIDESAADNSEPTGQQSGMTEYVATRW 187
Query: 481 YLAPE-YLQSGRATEKSDVYSFGVLLLELVTGKRPTDP 517
Y APE L S + + DV+S G +L EL +RP P
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFP 224
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 317 DVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSD-----QVFERELEILGSIKHINLV 370
+V+G G F V R + + G FAVK +D ++ S + +RE I +KH ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L ++++++ L + + + + + + L Y H +
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 431 CCPKIIHRDIKSSNILL--DENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
IIHRD+K N+LL EN P + DFG+A + + E V GT ++APE +
Sbjct: 150 ---NIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
+ + DV+ GV+L L++G P
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 141
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 142 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPE 194
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 156
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPE 209
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGS--DQVFERELEILGSIKHINLVNLRGY 375
+G G F V R + G +A K I+ + + Q ERE I +KH N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 376 CRLPATKLLIYDYLSMGSL-DDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
L++D ++ G L +D + + + + + L ++H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAR--------EYYSEADASHCIQQILESVNHCHLNG 123
Query: 435 IIHRDIKSSNILL---DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
I+HRD+K N+LL + ++DFGLA + V + AGT GYL+PE L+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 492 ATEKSDVYSFGVLLLELVTGKRP 514
+ D+++ GV+L L+ G P
Sbjct: 183 YGKPVDMWACGVILYILLVGYPP 205
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGTF-AVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR 377
+GSG FG M AVK I+R E D+ +RE+ S++H N+V +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERG-EKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIH 437
P ++ +Y S G L + + G + AR G++Y H ++ H
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAG---RFSEDEARFFFQ-QLISGVSYCH---AMQVCH 138
Query: 438 RDIKSSNILLDENLEPH--VSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEK 495
RD+K N LLD + P + FG +K V TV GT Y+APE L K
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV--GTPAYIAPEVLLKKEYDGK 196
Query: 496 -SDVYSFGVLLLELVTGKRP-TDP 517
+DV+S GV L ++ G P DP
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDP 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARF-YAAQIVLTFE 156
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 36/213 (16%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGS--DQVFERELEILGSIKHINLVNLRGY 375
+G G F V R V G +A K I+ + + Q ERE I +KH N+V L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 376 CRLPATKLLIYDYLSMGSL-DDFLHE--HGEG------QQLLNWSARLKIALGSARGLAY 426
L++D ++ G L +D + + E QQ+L A
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE---------------AV 116
Query: 427 LHHDCCPK--IIHRDIKSSNILLDENLEP---HVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
LH C + ++HRD+K N+LL + ++DFGLA + V + AGT GY
Sbjct: 117 LH---CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGY 172
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
L+PE L+ + D+++ GV+L L+ G P
Sbjct: 173 LSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGS--DQVFERELEILGSIKHINLVNLRGY 375
+G G F V R + G +A K I+ + + Q ERE I +KH N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 376 CRLPATKLLIYDYLSMGSL-DDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
L++D ++ G L +D + + + + + L ++H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAR--------EYYSEADASHCIQQILESVNHCHLNG 123
Query: 435 IIHRDIKSSNILL---DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
I+HRD+K N+LL + ++DFGLA + V + AGT GYL+PE L+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 492 ATEKSDVYSFGVLLLELVTGKRP 514
+ D+++ GV+L L+ G P
Sbjct: 183 YGKPVDMWACGVILYILLVGYPP 205
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 309 KLEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSI 364
+L+ D +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGL 424
LV L + + ++ +Y++ G + L G + AR A
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTF 154
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT LAP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEALAP 207
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
E + S + D ++ GVL+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 84/205 (40%), Gaps = 16/205 (7%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFE------RELEILG---SIKHINL 369
+G G +GTVY+ G F + R G RE+ +L + +H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA--RGLAYL 427
V L C T I L +D L + + A L RGL +L
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 136
Query: 428 HHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
H +C I+HRD+K NIL+ ++DFGLA++ + A VV T Y APE L
Sbjct: 137 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV--TLWYRAPEVL 191
Query: 488 QSGRATEKSDVYSFGVLLLELVTGK 512
D++S G + E+ K
Sbjct: 192 LQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 156
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 36/213 (16%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGS---DQVFERELEILGSIKHINLVNLRGY 375
+G G F V R V G I +++ S Q ERE I +KH N+V L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 376 CRLPATKLLIYDYLSMGSL-DDFLHE--HGEG------QQLLNWSARLKIALGSARGLAY 426
LI+D ++ G L +D + + E QQ+L A
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE---------------AV 123
Query: 427 LHHDCCPK--IIHRDIKSSNILLDENLEP---HVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
LH C + ++HR++K N+LL L+ ++DFGLA + V+ E AGT GY
Sbjct: 124 LH---CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGY 179
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
L+PE L+ + D+++ GV+L L+ G P
Sbjct: 180 LSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y+ G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVM----NDCGTFAVKRIDRSREGSDQVFERELE---ILGSIKHINLVN 371
+G G FG V++ + N A+K SD V E+ L+ + H ++V
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L G +I + ++G L FL L+ ++ + A + LAYL
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLESK- 130
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+ +HRDI + N+L+ + DFGL++ + D + + ++APE + R
Sbjct: 131 --RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 492 ATEKSDVYSFGVLLLE-LVTGKRP 514
T SDV+ FGV + E L+ G +P
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE--GSDQVFER--ELEILGSIKHIN 368
D ++G G FG V + G + +I R D+V E +L + +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
L L+ + + +Y + G L F H E + AR A L YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRE-RVFTEERARFYGA-EIVSALEYLH 122
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
+++RDIK N++LD++ ++DFGL K + + A + T GT YLAPE L+
Sbjct: 123 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLE 178
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
D + GV++ E++ G+ P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE--GSDQVFER--ELEILGSIKHIN 368
D ++G G FG V + G + +I R D+V E +L + +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
L L+ + + +Y + G L F H E + AR A L YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRE-RVFTEERARFYGA-EIVSALEYLH 122
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
+++RDIK N++LD++ ++DFGL K + + A + T GT YLAPE L+
Sbjct: 123 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLE 178
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
D + GV++ E++ G+ P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 37/235 (15%)
Query: 302 PSCEIIEKLEALDEED-----VVGSGGFGTVYRMVM-NDCGTFAVKRIDRS---REGSDQ 352
P +++++++ L ED V+G G FG V + M N +A+K +++ +
Sbjct: 61 PFTQLVKEMQ-LHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 119
Query: 353 VFERELEIL--GSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLN 409
F E ++L G + I ++ Y L L+ DY G L L + + +L
Sbjct: 120 CFREERDVLVNGDCQWITALH---YAFQDENHLYLVMDYYVGGDLLTLLSKFED--KLPE 174
Query: 410 WSARLKI-----ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464
AR I A+ S L Y +HRDIK N+LLD N ++DFG +
Sbjct: 175 DMARFYIGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKM 225
Query: 465 VDEEAHVTTVVAGTFGYLAPEYLQS-----GRATEKSDVYSFGVLLLELVTGKRP 514
D+ ++V GT Y++PE LQ+ G+ + D +S GV + E++ G+ P
Sbjct: 226 NDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 116/276 (42%), Gaps = 24/276 (8%)
Query: 316 EDVVGSGGFGTVYRMV-MNDCGTFAVKRID-----RSREGSDQVFERELEILGSIKHINL 369
E +G G F VYR + D A+K++ ++ +D + +E+++L + H N+
Sbjct: 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI--KEIDLLKQLNHPNV 94
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429
+ ++ + G L + + ++L+ K + L ++H
Sbjct: 95 IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154
Query: 430 DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+++HRDIK +N+ + + D GL + + ++V GT Y++PE +
Sbjct: 155 R---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHE 210
Query: 490 GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549
KSD++S G LL E+ + P F +N+ + + D
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSP----FYGDKMNLYSLCKKI-------EQCDYPPLP 259
Query: 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585
+D + E + ++ C + +P+ RP + V + ++
Sbjct: 260 SDHYS-EELRQLVNMCINPDPEKRPDVTYVYDVAKR 294
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 37/235 (15%)
Query: 302 PSCEIIEKLEALDEED-----VVGSGGFGTVYRMVM-NDCGTFAVKRIDRS---REGSDQ 352
P +++++++ L ED V+G G FG V + M N +A+K +++ +
Sbjct: 77 PFTQLVKEMQ-LHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 135
Query: 353 VFERELEIL--GSIKHINLVNLRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQQLLN 409
F E ++L G + I ++ Y L L+ DY G L L + + +L
Sbjct: 136 CFREERDVLVNGDCQWITALH---YAFQDENHLYLVMDYYVGGDLLTLLSKFED--KLPE 190
Query: 410 WSARLKI-----ALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464
AR I A+ S L Y +HRDIK N+LLD N ++DFG +
Sbjct: 191 DMARFYIGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKM 241
Query: 465 VDEEAHVTTVVAGTFGYLAPEYLQS-----GRATEKSDVYSFGVLLLELVTGKRP 514
D+ ++V GT Y++PE LQ+ G+ + D +S GV + E++ G+ P
Sbjct: 242 NDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE--GSDQVFER--ELEILGSIKHIN 368
D ++G G FG V + G + +I R D+V E +L + +H
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
L L+ + + +Y + G L F H E + AR A L YLH
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRE-RVFTEERARFYGA-EIVSALEYLH 125
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
+++RDIK N++LD++ ++DFGL K + + A + T GT YLAPE L+
Sbjct: 126 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLE 181
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
D + GV++ E++ G+ P
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+++D+ V+DFGLAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRSREGSDQVFE---RELEILGSIKHINLVN 371
V+G G FG V M+ + GT +A+K + + D E E +L + +
Sbjct: 26 VLGKGSFGKV--MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 372 LRGYCRLPATKL-LIYDYLSMGSLDDFLHEHGEGQ--QLLNWSARLKIALGSARGLAYLH 428
C +L + +Y++ G L + + G+ + Q + ++A + I GL +LH
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------GLFFLH 137
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
II+RD+K N++LD ++DFG+ K + + T GT Y+APE +
Sbjct: 138 KR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM-MDGVTTREFCGTPDYIAPEIIA 193
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRPTD 516
+ D +++GVLL E++ G+ P D
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y G + L G + AR A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 156
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+++D+ V+DFG AK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+++D+ V+DFGLAK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 25/191 (13%)
Query: 395 DDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPH 454
D F E + L+++S ++ ARG+ +L C IHRD+ + NILL EN
Sbjct: 189 DGFYKEPITMEDLISYSFQV------ARGMEFLSSRKC---IHRDLAARNILLSENNVVK 239
Query: 455 VSDFGLAKLLVDEEAHVTTVVAG-TFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GK 512
+ DFGLA+ + +V ++APE + + KSDV+S+GVLL E+ + G
Sbjct: 240 ICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGG 299
Query: 513 RPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDD 572
P G+ + + L+E R + T E I +I C +P +
Sbjct: 300 SPYP------GVQMDEDFCSRLREGM-------RMRAPEYSTPE-IYQIMLDCWHRDPKE 345
Query: 573 RPSMNQVLQLL 583
RP ++++ L
Sbjct: 346 RPRFAELVEKL 356
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 299 MPYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVM------NDCGTFAVKRIDRSREGSD- 351
+PY + + E L +G G FG V + C T AVK + S+
Sbjct: 15 LPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEY 74
Query: 352 QVFERELEILGSI-KHINLVNLRGYCRLPATKLL-IYDYLSMGSLDDFL 398
+ EL+IL I H+N+VNL G C L+ I +Y G+L ++L
Sbjct: 75 KALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+++D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 319 VGSGGFGTVYRMVM----NDCGTFAVKRIDRSREGSDQVFERELE---ILGSIKHINLVN 371
+G G FG V++ + N A+K SD V E+ L+ + H ++V
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC 431
L G +I + ++G L FL L+ ++ + A + LAYL
Sbjct: 456 LIGVITENPV-WIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLESK- 510
Query: 432 CPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
+ +HRDI + N+L+ + DFGL++ + D + + ++APE + R
Sbjct: 511 --RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 492 ATEKSDVYSFGVLLLE-LVTGKRP 514
T SDV+ FGV + E L+ G +P
Sbjct: 569 FTSASDVWMFGVCMWEILMHGVKP 592
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFXEPHARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+++D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 319 VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIK-HINLVNLRGYC 376
+G G F + V FAVK I + E + Q +E+ L + H N+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ---KEITALKLCEGHPNIVKLHEVF 75
Query: 377 RLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436
L+ + L+ G L E + ++ + + I ++++H ++
Sbjct: 76 HDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVV 128
Query: 437 HRDIKSSNILL---DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
HRD+K N+L ++NLE + DFG A+L + + T T Y APE L
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYD 187
Query: 494 EKSDVYSFGVLLLELVTGKRP 514
E D++S GV+L +++G+ P
Sbjct: 188 ESCDLWSLGVILYTMLSGQVP 208
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y G + L G + AR A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 155
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+++D+ V+DFG AK + T + GT YLAPE
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 208
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TF 479
A+G+ +L C IHRD+ + NILL E + DFGLA+ + + +V A
Sbjct: 201 AKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 480 GYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP-----TDPTFVKRGLNVVGWMNTL 533
++APE + T +SDV+SFGVLL E+ + G P D F +R
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----------- 306
Query: 534 LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
LKE R D T E + + C P RP+ +++++ L
Sbjct: 307 LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 348
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 319 VGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G G FG V C T AVK + S+ + EL+IL I H+N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 371 NLRGYCRLPATKLL-IYDYLSMGSLDDFL 398
NL G C P L+ I ++ G+L +L
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TF 479
A+G+ +L C IHRD+ + NILL E + DFGLA+ + + +V A
Sbjct: 203 AKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 480 GYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP-----TDPTFVKRGLNVVGWMNTL 533
++APE + T +SDV+SFGVLL E+ + G P D F +R
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----------- 308
Query: 534 LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
LKE R D T E + + C P RP+ +++++ L
Sbjct: 309 LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 350
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 319 VGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G G FG V C T AVK + S+ + EL+IL I H+N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 371 NLRGYCRLPATKLL-IYDYLSMGSLDDFL 398
NL G C P L+ I ++ G+L +L
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 318 VVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE--GSDQVFER--ELEILGSIKHINLVNLR 373
++G G FG V + G + +I R D+V E +L + +H L L+
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 76
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
+ + +Y + G L F H E + AR A L YLH
Sbjct: 77 YAFQTHDRLCFVMEYANGGEL--FFHLSRE-RVFTEERARFYGA-EIVSALEYLH---SR 129
Query: 434 KIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
+++RDIK N++LD++ ++DFGL K + + A GT YLAPE L+
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYG 188
Query: 494 EKSDVYSFGVLLLELVTGKRP 514
D + GV++ E++ G+ P
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLP 209
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 12/206 (5%)
Query: 313 LDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE--GSDQVFER--ELEILGSIKHIN 368
D ++G G FG V + G + +I R D+V E +L + +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
L L+ + + +Y + G L F H E + AR A L YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRE-RVFTEERARFYGA-EIVSALEYLH 122
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
+++RDIK N++LD++ ++DFGL K + + A GT YLAPE L+
Sbjct: 123 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLE 178
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRP 514
D + GV++ E++ G+ P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 318 VVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE--GSDQVFER--ELEILGSIKHINLVNLR 373
++G G FG V + G + +I R D+V E +L + +H L L+
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
+ + +Y + G L F H E + AR A L YLH
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL--FFHLSRE-RVFTEERARFYGA-EIVSALEYLH---SR 124
Query: 434 KIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
+++RDIK N++LD++ ++DFGL K + + A GT YLAPE L+
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYG 183
Query: 494 EKSDVYSFGVLLLELVTGKRP 514
D + GV++ E++ G+ P
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLP 204
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TF 479
A+G+ +L C IHRD+ + NILL E + DFGLA+ + + +V A
Sbjct: 210 AKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 480 GYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP-----TDPTFVKRGLNVVGWMNTL 533
++APE + T +SDV+SFGVLL E+ + G P D F +R
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----------- 315
Query: 534 LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
LKE R D T E + + C P RP+ +++++ L
Sbjct: 316 LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 357
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 319 VGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSD-QVFERELEILGSI-KHINLV 370
+G G FG V C T AVK + S+ + EL+IL I H+N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 371 NLRGYCRLPATKLL-IYDYLSMGSLDDFL 398
NL G C P L+ I ++ G+L +L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 318 VVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE--GSDQVFER--ELEILGSIKHINLVNLR 373
++G G FG V + G + +I R D+V E +L + +H L L+
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP 433
+ + +Y + G L F H E + AR A L YLH
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL--FFHLSRE-RVFTEERARFYGA-EIVSALEYLH---SR 124
Query: 434 KIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
+++RDIK N++LD++ ++DFGL K + + A GT YLAPE L+
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYG 183
Query: 494 EKSDVYSFGVLLLELVTGKRP 514
D + GV++ E++ G+ P
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLP 204
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAG-TF 479
A+G+ +L C IHRD+ + NILL E + DFGLA+ + + +V A
Sbjct: 208 AKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 480 GYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRP-----TDPTFVKRGLNVVGWMNTL 533
++APE + T +SDV+SFGVLL E+ + G P D F +R
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----------- 313
Query: 534 LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
LKE R D T E + + C P RP+ +++++ L
Sbjct: 314 LKEG-------TRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 355
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 319 VGSGGFGTVYRM------VMNDCGTFAVKRIDRSREGSDQVFER----ELEILGSI-KHI 367
+G G FG V C T AVK + +EG+ R EL+IL I H+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 91
Query: 368 NLVNLRGYCRLPATKLL-IYDYLSMGSLDDFL 398
N+VNL G C P L+ I ++ G+L +L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 74/261 (28%)
Query: 319 VGSGGFGTVY--RMVMNDCGTFAVKRID-RSREGSDQVFERELEILGSIKHINLVN-LRG 374
+G GGFG V+ + ++DC +A+KRI +RE + + RE++ L ++H +V
Sbjct: 14 MGRGGFGVVFEAKNKVDDCN-YAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 72
Query: 375 YCRLPATK-------LLIYD----------------YLSMGSLDDFLHEHGEGQ------ 405
+ P K + + D + + +D F ++ GQ
Sbjct: 73 WLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSP 132
Query: 406 --------------QLLNWSAR------------LKIALGSARGLAYLHHDCCPKIIHRD 439
L +W R L I + A + +LH ++HRD
Sbjct: 133 KVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRD 189
Query: 440 IKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVV-----------AGTFGYLAPEYLQ 488
+K SNI + V DFGL + +E T + GT Y++PE +
Sbjct: 190 LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIH 249
Query: 489 SGRATEKSDVYSFGVLLLELV 509
+ K D++S G++L EL+
Sbjct: 250 GNNYSHKVDIFSLGLILFELL 270
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHIN- 368
L+ D V+G G + V + + R+ + +D + +++ + + KH+
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND---DEDIDWVQTEKHVFE 107
Query: 369 -------LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA 421
LV L + + + +Y++ G D + ++L AR A S
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAEISL 164
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
L YLH II+RD+K N+LLD ++D+G+ K + T+ GT Y
Sbjct: 165 -ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGDTTSTFCGTPNY 219
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTD 516
+APE L+ D ++ GVL+ E++ G+ P D
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 23/211 (10%)
Query: 318 VVGSGGFGTVYRMVMNDCG-TFAVK---RIDRSREGSDQVFERELEILGSIKHINLVNLR 373
V+G G F V + M G +A+K + D + G F E ++L + + L
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH 127
Query: 374 GYCRLPATKLLIYDYLSMGSLDDFLHEHGE---GQQLLNWSARLKIALGSARGLAYLHHD 430
+ L+ +Y G L L + GE + + A + +A+ S L Y
Sbjct: 128 FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY---- 183
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS- 489
+HRDIK NILLD ++DFG L + + V GT YL+PE LQ+
Sbjct: 184 -----VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAV 238
Query: 490 ------GRATEKSDVYSFGVLLLELVTGKRP 514
G + D ++ GV E+ G+ P
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSRE-----GSDQVFERELEILGSIKHINLVNLR 373
+GSG +G V ++ D T + I R+ S+ E+ +L + H N++ L
Sbjct: 45 LGSGAYGEV--LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 374 GYCRLPATKLLIYDYLSMGSL-DDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
+ L+ + G L D+ +H + ++ + +K L G+ YLH
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNE--VDAAVIIKQVLS---GVTYLHK--- 154
Query: 433 PKIIHRDIKSSNILLDENLEP---HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
I+HRD+K N+LL+ + + DFGL+ + +++ + GT Y+APE L+
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL--GTAYYIAPEVLRK 212
Query: 490 GRATEKSDVYSFGVLLLELVTGKRP 514
+ EK DV+S GV+L L+ G P
Sbjct: 213 -KYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%)
Query: 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS 496
HRD+K NIL+ + ++ DFG+A DE+ GT Y APE AT ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 497 DVYSFGVLLLELVTGKRP 514
D+Y+ +L E +TG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQ----------VFEREL 358
L+ D V+G G + V + + +A+K + + D+ VFE+
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ-- 76
Query: 359 EILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
+ H LV L + + + +Y++ G D + ++L AR A
Sbjct: 77 ----ASNHPFLVGLHSCFQTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE 129
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
S L YLH II+RD+K N+LLD ++D+G+ K + T+ GT
Sbjct: 130 ISL-ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGDTTSXFCGT 184
Query: 479 FGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ D ++ GVL+ E++ G+ P D
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYL 482
L YLH + +++RD+K N++LD++ ++DFGL K + + A + T GT YL
Sbjct: 260 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYL 316
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE L+ D + GV++ E++ G+ P
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYL 482
L YLH + +++RD+K N++LD++ ++DFGL K + + A + T GT YL
Sbjct: 263 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYL 319
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514
APE L+ D + GV++ E++ G+ P
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E I ++
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
LV L + + ++ +Y G + L G + AR A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 156
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+L+D+ V+DFG AK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 118/279 (42%), Gaps = 38/279 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTFA--------VKRIDRSREGSDQVFERELEILGSIKHINLV 370
+G G F +++ V + G + +K +D++ + F ++ + H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
G C +L+ +++ GSLD +L ++ + +N +L++A A + +L +
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAWAMHFLEEN 132
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT----VVAGTFGYLAPEY 486
+IH ++ + NILL + + K L D +T ++ ++ PE
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIK-LSDPGISITVLPKDILQERIPWVPPEC 188
Query: 487 LQSGRATE-KSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544
+++ + +D +SFG L E+ + G +P ++ L + +L+ D
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSGGDKP---------------LSALDSQRKLQFYED 233
Query: 545 KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
+ A + + C D PD RPS +++ L
Sbjct: 234 RHQLPA--PKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
L L + + ++ +Y G + L G + AR A
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFXEPHARF-YAAQIVLTFE 156
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+++D+ V+DFG AK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQ----------VFEREL 358
L+ D V+G G + V + + +A+K + + D+ VFE+
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ-- 61
Query: 359 EILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
+ H LV L + + + +Y++ G D + ++L AR A
Sbjct: 62 ----ASNHPFLVGLHSCFQTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE 114
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
S L YLH II+RD+K N+LLD ++D+G+ K + T+ GT
Sbjct: 115 ISL-ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGDTTSXFCGT 169
Query: 479 FGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ D ++ GVL+ E++ G+ P D
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 22/217 (10%)
Query: 317 DVVGSGGFGTVYRMVMNDCGT-FAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRG 374
D++G G V+R G FA+K + S V RE E+L + H N+V L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 375 YCRLPAT--KLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T K+LI ++ GSL L E L S L + G+ +L +
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE-SEFLIVLRDVVGGMNHLRENG- 132
Query: 433 PKIIHRDIKSSNILL----DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
I+HR+IK NI+ D ++DFG A+ L D+E V+ + GT YL P+ +
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMYE 188
Query: 489 SG--------RATEKSDVYSFGVLLLELVTGKRPTDP 517
+ D++S GV TG P P
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQ----------VFEREL 358
L+ D V+G G + V + + +A+K + + D+ VFE+
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ-- 65
Query: 359 EILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIAL 418
+ H LV L + + + +Y++ G D + ++L AR A
Sbjct: 66 ----ASNHPFLVGLHSCFQTESRLFFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE 118
Query: 419 GSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGT 478
S L YLH II+RD+K N+LLD ++D+G+ K + T+ GT
Sbjct: 119 ISL-ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGDTTSXFCGT 173
Query: 479 FGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTD 516
Y+APE L+ D ++ GVL+ E++ G+ P D
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
L L + + ++ +Y G + L G + AR A
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 156
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+++D+ V+DFG AK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER---ELEILGSIK 365
L+ + +G+G FG V + + G +A+K +D+ + + E E IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 366 HINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA 425
L L + + ++ +Y G + L G + AR A
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFE 156
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
YLH +I+RD+K N+++D+ V+DFG AK + T + GT YLAPE
Sbjct: 157 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPE 209
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTGKRP 514
+ S + D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 118/279 (42%), Gaps = 38/279 (13%)
Query: 319 VGSGGFGTVYRMVMNDCGTFA--------VKRIDRSREGSDQVFERELEILGSIKHINLV 370
+G G F +++ V + G + +K +D++ + F ++ + H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
G C +L+ +++ GSLD +L ++ + +N +L++A A + +L +
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN 132
Query: 431 CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTT----VVAGTFGYLAPEY 486
+IH ++ + NILL + + K L D +T ++ ++ PE
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIK-LSDPGISITVLPKDILQERIPWVPPEC 188
Query: 487 LQSGRATE-KSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544
+++ + +D +SFG L E+ + G +P ++ L + +L+ D
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSGGDKP---------------LSALDSQRKLQFYED 233
Query: 545 KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLL 583
+ A + + C D PD RPS +++ L
Sbjct: 234 RHQLPA--PKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 13/202 (6%)
Query: 318 VVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFE---RELEILGSIK-HINLVNL 372
V+G G FG V + + G +AVK + + D E E IL + H L L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
+ P + ++++ G D + + ++ AR A L +LH
Sbjct: 90 FCCFQTPDRLFFVMEFVNGG---DLMFHIQKSRRFDEARARF-YAAEIISALMFLHDK-- 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
II+RD+K N+LLD ++DFG+ K + T GT Y+APE LQ
Sbjct: 144 -GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV-TTATFCGTPDYIAPEILQEMLY 201
Query: 493 TEKSDVYSFGVLLLELVTGKRP 514
D ++ GVLL E++ G P
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 38/185 (20%)
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLD-------------ENLEPHVSDFGLAKLLVDE 467
A G+A+LH KIIHRD+K NIL+ ENL +SDFGL K L
Sbjct: 125 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 468 EAHVTTVV---AGTFGYLAPEYLQSG-------RATEKSDVYSFG-VLLLELVTGKRPTD 516
++ T + +GT G+ APE L+ R T D++S G V L GK P
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
Query: 517 PTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSM 576
+ R N++ + +L D+ D + ++ ++ D +P RP+
Sbjct: 242 DKY-SRESNIIRGIFSL----------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Query: 577 NQVLQ 581
+VL+
Sbjct: 291 MKVLR 295
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 22/217 (10%)
Query: 317 DVVGSGGFGTVYRMVMNDCGT-FAVKRIDR-SREGSDQVFERELEILGSIKHINLVNLRG 374
D++G G V+R G FA+K + S V RE E+L + H N+V L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 375 YCRLPAT--KLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T K+LI ++ GSL L E L S L + G+ +L +
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE-SEFLIVLRDVVGGMNHLRENG- 132
Query: 433 PKIIHRDIKSSNILL----DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
I+HR+IK NI+ D ++DFG A+ L D+E V + GT YL P+ +
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMYE 188
Query: 489 SG--------RATEKSDVYSFGVLLLELVTGKRPTDP 517
+ D++S GV TG P P
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 31/225 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVM------NDCGTFAVKRIDRSREGS-DQVFERELEILG 362
L A+ + +G FG VY+ + A+K + EG + F E +
Sbjct: 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRA 84
Query: 363 SIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFL---HEHGEG---------QQLLNW 410
++H N+V L G +I+ Y S G L +FL H + + L
Sbjct: 85 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 144
Query: 411 SARLKIALGSARGLAYL--HHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468
+ + A G+ YL HH ++H+D+ + N+L+ + L +SD GL + +
Sbjct: 145 PDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVY--A 197
Query: 469 AHVTTVVAGTF---GYLAPEYLQSGRATEKSDVYSFGVLLLELVT 510
A ++ + ++APE + G+ + SD++S+GV+L E+ +
Sbjct: 198 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 89/216 (41%), Gaps = 38/216 (17%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFER--------ELEILGSIKHINL 369
+GSG FG V+ V + VK I + + D E E+ IL ++H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNW---SARLKIALGS------ 420
+ + L I++ + G + +HG G L + RL L S
Sbjct: 92 IKV----------LDIFE--NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG 480
+ YL IIHRDIK NI++ E+ + DFG A L E + GT
Sbjct: 140 VSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKLFYTFCGTIE 194
Query: 481 YLAPEYLQSG--RATEKSDVYSFGVLLLELVTGKRP 514
Y APE L R E +++S GV L LV + P
Sbjct: 195 YCAPEVLMGNPYRGPE-LEMWSLGVTLYTLVFEENP 229
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 309 KLEALDEE--DVVGSGGFGTVYRMVMNDC--GTFAVK---RIDRSREGSDQVFERELEIL 361
+++A D E V+G G FG V ++V + +A+K + + + F E +I+
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 128
Query: 362 GSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLN-WSARLKIALGS 420
+V L + ++ +Y+ G L + + + ++ ++A + +AL +
Sbjct: 129 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA 188
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG 480
+ + IHRD+K N+LLD++ ++DFG + E GT
Sbjct: 189 IHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 481 YLAPEYLQS----GRATEKSDVYSFGVLLLELVTGKRP 514
Y++PE L+S G + D +S GV L E++ G P
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 309 KLEALDEE--DVVGSGGFGTVYRMVMNDC--GTFAVK---RIDRSREGSDQVFERELEIL 361
+++A D E V+G G FG V ++V + +A+K + + + F E +I+
Sbjct: 65 RMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 123
Query: 362 GSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLN-WSARLKIALGS 420
+V L + ++ +Y+ G L + + + ++ ++A + +AL +
Sbjct: 124 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA 183
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG 480
+ + IHRD+K N+LLD++ ++DFG + E GT
Sbjct: 184 IHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 234
Query: 481 YLAPEYLQS----GRATEKSDVYSFGVLLLELVTGKRP 514
Y++PE L+S G + D +S GV L E++ G P
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 309 KLEALDEE--DVVGSGGFGTVYRMVMNDC--GTFAVK---RIDRSREGSDQVFERELEIL 361
+++A D E V+G G FG V ++V + +A+K + + + F E +I+
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 128
Query: 362 GSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLN-WSARLKIALGS 420
+V L + ++ +Y+ G L + + + ++ ++A + +AL +
Sbjct: 129 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA 188
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG 480
+ + IHRD+K N+LLD++ ++DFG + E GT
Sbjct: 189 IHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 481 YLAPEYLQS----GRATEKSDVYSFGVLLLELVTGKRP 514
Y++PE L+S G + D +S GV L E++ G P
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 40/271 (14%)
Query: 319 VGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSDQVFE--RELEILGSIKHI-NLVNLRG 374
+G G F V + + G +A K + + R G D E E+ +L K ++NL
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ +LI +Y + G + F E ++++ + +++ G+ YLH +
Sbjct: 97 VYENTSEIILILEYAAGGEI--FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---N 151
Query: 435 IIHRDIKSSNILLDENLEP----HVSDFGLAKLLVDEEAHVTTV--VAGTFGYLAPEYLQ 488
I+H D+K NILL ++ P + DFG+++ + H + + GT YLAPE L
Sbjct: 152 IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSRKI----GHACELREIMGTPEYLAPEILN 206
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548
T +D+++ G++ L+T P FV N ++N I +
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSP----FVGED-NQETYLN-----------ISQVNV 250
Query: 549 DADMETVEAILEIAARCTDA----NPDDRPS 575
D ET ++ ++A + NP+ RP+
Sbjct: 251 DYSEETFSSVSQLATDFIQSLLVKNPEKRPT 281
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 31/225 (13%)
Query: 310 LEALDEEDVVGSGGFGTVYRMVM------NDCGTFAVKRIDRSREGS-DQVFERELEILG 362
L A+ + +G FG VY+ + A+K + EG + F E +
Sbjct: 8 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRA 67
Query: 363 SIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFL---HEHGEG---------QQLLNW 410
++H N+V L G +I+ Y S G L +FL H + + L
Sbjct: 68 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 127
Query: 411 SARLKIALGSARGLAYL--HHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468
+ + A G+ YL HH ++H+D+ + N+L+ + L +SD GL + +
Sbjct: 128 PDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVY--A 180
Query: 469 AHVTTVVAGTF---GYLAPEYLQSGRATEKSDVYSFGVLLLELVT 510
A ++ + ++APE + G+ + SD++S+GV+L E+ +
Sbjct: 181 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 81/191 (42%), Gaps = 15/191 (7%)
Query: 329 RMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATK--LLIY 386
R ND +K D S S + F E L H N++ + G C+ P LI
Sbjct: 30 RWQGNDIVVKVLKVRDWSTRKS-RDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88
Query: 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNIL 446
+ GSL + LHE +++ S +K AL ARG A+LH P I + S ++
Sbjct: 89 HWXPYGSLYNVLHEGTNF--VVDQSQAVKFALDXARGXAFLH-TLEPLIPRHALNSRSVX 145
Query: 447 LDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA---TEKSDVYSFGV 503
+DE+ +S + K ++APE LQ +D +SF V
Sbjct: 146 IDEDXTARISXADV-KFSFQSPGRXYAP-----AWVAPEALQKKPEDTNRRSADXWSFAV 199
Query: 504 LLLELVTGKRP 514
LL ELVT + P
Sbjct: 200 LLWELVTREVP 210
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 22/223 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFE-RELEILG 362
E E++ + + VG G FG V+RM G AVK++ +VF EL
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL------EVFRVEELVACA 105
Query: 363 SIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA- 421
+ +V L G R + + L GSL + + G + R LG A
Sbjct: 106 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE-----DRALYYLGQAL 160
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLD-ENLEPHVSDFGLAKLL----VDEEAHVTTVVA 476
GL YLH +I+H D+K+ N+LL + + DFG A L + + +
Sbjct: 161 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTF 519
GT ++APE + K D++S ++L ++ G P F
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 260
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
II+RD+K N++LD ++DFG+ K + + T GT Y+APE + +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENI-WDGVTTKXFCGTPDYIAPEIIAYQPYGK 521
Query: 495 KSDVYSFGVLLLELVTGKRP 514
D ++FGVLL E++ G+ P
Sbjct: 522 SVDWWAFGVLLYEMLAGQAP 541
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 34/181 (18%)
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLD-------------ENLEPHVSDFGLAKLLVDE 467
A G+A+LH KIIHRD+K NIL+ ENL +SDFGL K L
Sbjct: 143 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 468 EAHVTTVV---AGTFGYLAPEYLQSG---RATEKSDVYSFG-VLLLELVTGKRPTDPTFV 520
+ + +GT G+ APE L+ R T D++S G V L GK P +
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY- 258
Query: 521 KRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
R N++ + +L D+ D + ++ ++ D +P RP+ +VL
Sbjct: 259 SRESNIIRGIFSL----------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 308
Query: 581 Q 581
+
Sbjct: 309 R 309
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 397 FLHEHGEGQQLLNWSARLKI-ALGSAR--------GLAYLHHDCCPKIIHRDIKSSNILL 447
F+ E+ G +L +R ++ + AR L YLH + +++RD+K N++L
Sbjct: 87 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLML 144
Query: 448 DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLE 507
D++ ++DFGL K + + A GT YLAPE L+ D + GV++ E
Sbjct: 145 DKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 203
Query: 508 LVTGKRP 514
++ G+ P
Sbjct: 204 MMCGRLP 210
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATE 494
II+RD+K N++LD ++DFG+ K + + T GT Y+APE + +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENI-WDGVTTKXFCGTPDYIAPEIIAYQPYGK 200
Query: 495 KSDVYSFGVLLLELVTGKRP 514
D ++FGVLL E++ G+ P
Sbjct: 201 SVDWWAFGVLLYEMLAGQAP 220
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 34/181 (18%)
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLD-------------ENLEPHVSDFGLAKLLVDE 467
A G+A+LH KIIHRD+K NIL+ ENL +SDFGL K L
Sbjct: 143 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 468 EAHVTTVV---AGTFGYLAPEYLQSG---RATEKSDVYSFG-VLLLELVTGKRPTDPTFV 520
+ + +GT G+ APE L+ R T D++S G V L GK P +
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY- 258
Query: 521 KRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVL 580
R N++ + +L D+ D + ++ ++ D +P RP+ +VL
Sbjct: 259 SRESNIIRGIFSL----------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 308
Query: 581 Q 581
+
Sbjct: 309 R 309
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 397 FLHEHGEGQQLLNWSARLKI-ALGSAR--------GLAYLHHDCCPKIIHRDIKSSNILL 447
F+ E+ G +L +R ++ + AR L YLH + +++RD+K N++L
Sbjct: 85 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLML 142
Query: 448 DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLE 507
D++ ++DFGL K + + A GT YLAPE L+ D + GV++ E
Sbjct: 143 DKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 201
Query: 508 LVTGKRP 514
++ G+ P
Sbjct: 202 MMCGRLP 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 397 FLHEHGEGQQLLNWSARLKI-ALGSAR--------GLAYLHHDCCPKIIHRDIKSSNILL 447
F+ E+ G +L +R ++ + AR L YLH + +++RD+K N++L
Sbjct: 86 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLML 143
Query: 448 DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLE 507
D++ ++DFGL K + + A GT YLAPE L+ D + GV++ E
Sbjct: 144 DKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 202
Query: 508 LVTGKRP 514
++ G+ P
Sbjct: 203 MMCGRLP 209
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 22/223 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFE-RELEILG 362
E E++ + + VG G FG V+RM G AVK++ +VF EL
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL------EVFRVEELVACA 121
Query: 363 SIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA- 421
+ +V L G R + + L GSL + + G + R LG A
Sbjct: 122 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE-----DRALYYLGQAL 176
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLD-ENLEPHVSDFGLAKLL----VDEEAHVTTVVA 476
GL YLH +I+H D+K+ N+LL + + DFG A L + + +
Sbjct: 177 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTF 519
GT ++APE + K D++S ++L ++ G P F
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 276
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 27/241 (11%)
Query: 308 EKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFE-RELEI---LG 362
++++ E + G G FGTV G + A+K++ + D F REL+I L
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-----DPRFRNRELQIMQDLA 74
Query: 363 SIKHINLVNLRGYCRL--PATKLLIYDYLSMGSLDDFLHE---HGEGQQLLNWSARLKIA 417
+ H N+V L+ Y + IY + M + D LH + +Q+ +K+
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVF 134
Query: 418 LGS-ARGLAYLHHDCCPKIIHRDIKSSNILLDE-NLEPHVSDFGLAKLLVDEEAHVTTVV 475
L R + LH + HRDIK N+L++E + + DFG AK L E +V +
Sbjct: 135 LFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC 193
Query: 476 AGTFGYLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLL 534
+ Y APE + + T D++S G + E++ G +P F RG N G ++ ++
Sbjct: 194 SRY--YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG----EPIF--RGDNSAGQLHEIV 245
Query: 535 K 535
+
Sbjct: 246 R 246
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 11/201 (5%)
Query: 317 DVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSD-QVFERELEILGSIKHINLVNLRGY 375
+++G G FG V++ G +I ++R D + + E+ ++ + H NL+ L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435
+L+ +Y+ G L D + + L+ +K G+ ++H I
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI---CEGIRHMHQ---MYI 208
Query: 436 IHRDIKSSNILL--DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT 493
+H D+K NIL + + + DFGLA+ E V GT +LAPE + +
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVNFGTPEFLAPEVVNYDFVS 266
Query: 494 EKSDVYSFGVLLLELVTGKRP 514
+D++S GV+ L++G P
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSP 287
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 317 DVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSD-----QVFERELEILGSIKHINLV 370
+V+G G F V R + + G FAVK +D ++ S + +RE I +KH ++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L ++++++ L + + + + + + L Y H +
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 431 CCPKIIHRDIKSSNILL--DENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
IIHRD+K +LL EN P + FG+A + + E V GT ++APE +
Sbjct: 150 ---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
+ + DV+ GV+L L++G P
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 317 DVVGSGGFGTVYRMVMNDCGT-FAVKRIDRSREGSD-----QVFERELEILGSIKHINLV 370
+V+G G F V R + + G FAVK +D ++ S + +RE I +KH ++V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 371 NLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD 430
L ++++++ L + + + + + + L Y H +
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 151
Query: 431 CCPKIIHRDIKSSNILL--DENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL 487
IIHRD+K +LL EN P + FG+A + + E V GT ++APE +
Sbjct: 152 ---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 488 QSGRATEKSDVYSFGVLLLELVTGKRP 514
+ + DV+ GV+L L++G P
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 369 LVNLRGYCRLPATKLLIYDYLS-MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYL 427
++ L + P + +LI + + L DF+ E G Q+ L S ++ L + R
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV-LEAVRHC--- 173
Query: 428 HHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEY 486
H+C ++HRDIK NIL+D N E + DFG LL D V T GT Y PE+
Sbjct: 174 -HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 227
Query: 487 LQSGRATEKS-DVYSFGVLLLELVTGKRP 514
++ R +S V+S G+LL ++V G P
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 22/223 (9%)
Query: 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFE-RELEILG 362
E E++ + + +G G FG V+RM G AVK++ +VF EL
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRL------EVFRVEELVACA 119
Query: 363 SIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSA- 421
+ +V L G R + + L GSL + + G + R LG A
Sbjct: 120 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE-----DRALYYLGQAL 174
Query: 422 RGLAYLHHDCCPKIIHRDIKSSNILLD-ENLEPHVSDFGLAKLL----VDEEAHVTTVVA 476
GL YLH +I+H D+K+ N+LL + + DFG A L + + +
Sbjct: 175 EGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 477 GTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTF 519
GT ++APE + K D++S ++L ++ G P F
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 274
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 33/233 (14%)
Query: 306 IIEKLEALD---EEDV--------VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV 353
+ EKL+ +D E+V +G G FG V+RM G AVK++ +V
Sbjct: 58 LTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRL------EV 111
Query: 354 FE-RELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSA 412
F EL + +V L G R + + L GSL + E G +
Sbjct: 112 FRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE-----D 166
Query: 413 RLKIALGSA-RGLAYLHHDCCPKIIHRDIKSSNILLD-ENLEPHVSDFGLAKLL----VD 466
R LG A GL YLH +I+H D+K+ N+LL + + DFG A L +
Sbjct: 167 RALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 223
Query: 467 EEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTF 519
++ + GT ++APE + K DV+S ++L ++ G P F
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFF 276
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 13/107 (12%)
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDEN---LEPHVSDFGLAKLLVDEEAHVTTVVAGTF 479
G+ YLH I+HRDIK NILL+ L + DFGL+ + + GT
Sbjct: 158 GICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YKLRDRLGTA 212
Query: 480 GYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP----TDPTFVKR 522
Y+APE L+ + EK DV+S GV++ L+ G P D +K+
Sbjct: 213 YYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKK 258
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 319 VGSGGFGTV-YRMVMNDCGTFAVKRIDR-------SREGSDQV-FERELEILGSIKHINL 369
+GSG G V C A+K I + +RE + E E+EIL + H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR------G 423
+ ++ + DY + L E GE + + RLK A
Sbjct: 78 IKIKNF-------FDAEDYYIVLEL----MEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 424 LAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG 480
+ YLH + IIHRD+K N+LL +E+ ++DFG +K+L E + + GT
Sbjct: 127 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 181
Query: 481 YLAPEYLQS-GRA--TEKSDVYSFGVLLLELVTGKRP 514
YLAPE L S G A D +S GV+L ++G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 50/239 (20%)
Query: 302 PSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRI--DRSREGSDQVFEREL 358
PS I++ + + +G G +G VY+ + T A+KRI + EG RE+
Sbjct: 28 PSATSIDRYRRITK---LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREV 84
Query: 359 EILGSIKHINLVNLRGYCRLPATKLLIYDY--------------LSMGSLDDFLHEHGEG 404
+L ++H N++ L+ LI++Y +SM + FL+
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLY----- 139
Query: 405 QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL---DENLEP--HVSDFG 459
QL+N G+ + H C +HRD+K N+LL D + P + DFG
Sbjct: 140 -QLIN-------------GVNFCHSRRC---LHRDLKPQNLLLSVSDASETPVLKIGDFG 182
Query: 460 LAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGKRPTDP 517
LA+ T + T Y PE L R S D++S + E++ K P P
Sbjct: 183 LARAFGIPIRQFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM-KTPLFP 239
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 38/185 (20%)
Query: 421 ARGLAYLHHDCCPKIIHRDIKSSNILLD-------------ENLEPHVSDFGLAKLLVDE 467
A G+A+LH KIIHRD+K NIL+ ENL +SDFGL K L
Sbjct: 125 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 468 EAHVTTVV---AGTFGYLAPEYLQSG-------RATEKSDVYSFG-VLLLELVTGKRPTD 516
+ + +GT G+ APE L+ R T D++S G V L GK P
Sbjct: 182 QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
Query: 517 PTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSM 576
+ R N++ + +L D+ D + ++ ++ D +P RP+
Sbjct: 242 DKY-SRESNIIRGIFSL----------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Query: 577 NQVLQ 581
+VL+
Sbjct: 291 MKVLR 295
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 319 VGSGGFGTV-YRMVMNDCGTFAVKRIDR-------SREGSDQV-FERELEILGSIKHINL 369
+GSG G V C A+K I + +RE + E E+EIL + H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR------G 423
+ ++ + DY + L E GE + + RLK A
Sbjct: 78 IKIKNF-------FDAEDYYIVLEL----MEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 424 LAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG 480
+ YLH + IIHRD+K N+LL +E+ ++DFG +K+L E + + GT
Sbjct: 127 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 181
Query: 481 YLAPEYLQS-GRA--TEKSDVYSFGVLLLELVTGKRP 514
YLAPE L S G A D +S GV+L ++G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 98/233 (42%), Gaps = 33/233 (14%)
Query: 306 IIEKLEALD---EEDV--------VGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQV 353
+ EKL+ +D E+V +G G FG V+RM G AVK++ +V
Sbjct: 77 LTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRL------EV 130
Query: 354 FE-RELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSA 412
F EL + +V L G R + + L GSL + E G +
Sbjct: 131 FRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE-----D 185
Query: 413 RLKIALGSA-RGLAYLHHDCCPKIIHRDIKSSNILLD-ENLEPHVSDFGLAKLL----VD 466
R LG A GL YLH +I+H D+K+ N+LL + + DFG A L +
Sbjct: 186 RALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 242
Query: 467 EEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTF 519
+ + GT ++APE + K DV+S ++L ++ G P F
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFF 295
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 319 VGSGGFGTV-YRMVMNDCGTFAVKRIDR-------SREGSDQV-FERELEILGSIKHINL 369
+GSG G V C A+K I + +RE + E E+EIL + H +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR------G 423
+ ++ + DY + L E GE + + RLK A
Sbjct: 77 IKIKNF-------FDAEDYYIVLEL----MEGGELFDKVVGNKRLKEATCKLYFYQMLLA 125
Query: 424 LAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG 480
+ YLH + IIHRD+K N+LL +E+ ++DFG +K+L E + + GT
Sbjct: 126 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 180
Query: 481 YLAPEYLQS-GRA--TEKSDVYSFGVLLLELVTGKRP 514
YLAPE L S G A D +S GV+L ++G P
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 319 VGSGGFGTV-YRMVMNDCGTFAVKRIDR-------SREGSDQV-FERELEILGSIKHINL 369
+GSG G V C A+K I + +RE + E E+EIL + H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR------G 423
+ ++ + DY + L E GE + + RLK A
Sbjct: 78 IKIKNF-------FDAEDYYIVLEL----MEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 424 LAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG 480
+ YLH + IIHRD+K N+LL +E+ ++DFG +K+L E + + GT
Sbjct: 127 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 181
Query: 481 YLAPEYLQS-GRA--TEKSDVYSFGVLLLELVTGKRP 514
YLAPE L S G A D +S GV+L ++G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 319 VGSGGFGTV-YRMVMNDCGTFAVKRIDR-------SREGSDQV-FERELEILGSIKHINL 369
+GSG G V C A+K I + +RE + E E+EIL + H +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR------G 423
+ ++ + +++ L E GE + + RLK A
Sbjct: 84 IKIKNFFDAEDYYIVLE-----------LMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 132
Query: 424 LAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFG 480
+ YLH + IIHRD+K N+LL +E+ ++DFG +K+L E + + GT
Sbjct: 133 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 187
Query: 481 YLAPEYLQS-GRA--TEKSDVYSFGVLLLELVTGKRP 514
YLAPE L S G A D +S GV+L ++G P
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 31/232 (13%)
Query: 308 EKLEALDEED--VVGSGGFGTVYRMVMNDCGT---FAVKRIDRSREGSDQVFERELEILG 362
E++E L E + VG G +G VY+ D +A+K+I+ + G RE+ +L
Sbjct: 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLR 73
Query: 363 SIKHINLVNLRGYCRLPATK--LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGS 420
+KH N+++L+ A + L++DY D H + +++ G
Sbjct: 74 ELKHPNVISLQKVFLSHADRKVWLLFDYAEH----DLWHIIKFHRASKANKKPVQLPRGM 129
Query: 421 ARGLAY-----LHHDCCPKIIHRDIKSSNILL----DENLEPHVSDFGLAKLL---VDEE 468
+ L Y +H+ ++HRD+K +NIL+ E ++D G A+L +
Sbjct: 130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL 189
Query: 469 AHVTTVVAGTFGYLAPEYLQSGRATEKS-DVYSFGVLLLELVTGKRPTDPTF 519
A + VV TF Y APE L R K+ D+++ G + EL+T ++P F
Sbjct: 190 ADLDPVVV-TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT----SEPIF 236
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 43/229 (18%)
Query: 318 VVGSGGFGTVYRMVMNDCGT---FAVKRIDRSREGSDQVFERELEILGSIK-HINLVNLR 373
V+ GGF VY D G+ +A+KR+ + E ++ +E+ + + H N+V
Sbjct: 35 VLAEGGFAFVYEA--QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 374 GYCRLPA----------TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARG 423
+C + + L+ L G L +FL + E + L+ LKI + R
Sbjct: 91 -FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKM-ESRGPLSCDTVLKIFYQTCRA 148
Query: 424 LAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA---------------KLLVDEE 468
+ ++H P IIHRD+K N+LL + DFG A + LV+EE
Sbjct: 149 VQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEE 207
Query: 469 AHVTTVVAGTFGYLAPEYL---QSGRATEKSDVYSFGVLLLELVTGKRP 514
T T Y PE + + EK D+++ G +L L + P
Sbjct: 208 ITRNT----TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 318 VVGSGGFGTV-YRMVMNDCGTFAVKRIDR-------SREGSDQV-FERELEILGSIKHIN 368
+GSG G V C A++ I + +RE + E E+EIL + H
Sbjct: 156 TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 215
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR------ 422
++ ++ + +++ L E GE + + RLK A
Sbjct: 216 IIKIKNFFDAEDYYIVLE-----------LMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF 479
+ YLH + IIHRD+K N+LL +E+ ++DFG +K+L E + + GT
Sbjct: 265 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 319
Query: 480 GYLAPEYLQS-GRA--TEKSDVYSFGVLLLELVTGKRP 514
YLAPE L S G A D +S GV+L ++G P
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 86/206 (41%), Gaps = 29/206 (14%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--------AVKRIDRSREGSDQVFE--RELEILGSIKHIN 368
+GSG G V C F AVK++ R + REL +L + H N
Sbjct: 30 IGSGAQGIV-------CAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKN 82
Query: 369 LVNLRGYCRLPATKLLIYD-YLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSARGLA 425
+++L T D YL M +D L + H E L+ + G+
Sbjct: 83 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME----LDHERMSYLLYQMLCGIK 138
Query: 426 YLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPE 485
+LH IIHRD+K SNI++ + + DFGLA+ VV T Y APE
Sbjct: 139 HLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVV--TRYYRAPE 193
Query: 486 YLQSGRATEKSDVYSFGVLLLELVTG 511
+ E D++S G ++ ELV G
Sbjct: 194 VILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 318 VVGSGGFGTV-YRMVMNDCGTFAVKRIDR-------SREGSDQV-FERELEILGSIKHIN 368
+GSG G V C A++ I + +RE + E E+EIL + H
Sbjct: 142 TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 201
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR------ 422
++ ++ + +++ L E GE + + RLK A
Sbjct: 202 IIKIKNFFDAEDYYIVLE-----------LMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTF 479
+ YLH + IIHRD+K N+LL +E+ ++DFG +K+L E + + GT
Sbjct: 251 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 305
Query: 480 GYLAPEYLQS-GRA--TEKSDVYSFGVLLLELVTGKRP 514
YLAPE L S G A D +S GV+L ++G P
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQ--VIQMELDHERMSYLLYQMLXGIKHLH---S 144
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 203 KENVDIWSVGCIMGEMVRHK 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQ--VIQMELDHERMSYLLYQMLXGIKHLH---S 144
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 203 KENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLXQ--VIQMELDHERMSYLLYQMLXGIKHLH---S 137
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 138 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 196 KENVDIWSVGCIMGEMVRHK 215
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 33/290 (11%)
Query: 319 VGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVF-ERELEILGSIKHINLVNLRGYCR 377
+G G FG V+R V + + + + G+DQV ++E+ IL +H N+++L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFE 71
Query: 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC------ 431
++I++++S LD F + +N SA L ++Y+H C
Sbjct: 72 SMEELVMIFEFIS--GLDIF--------ERINTSA---FELNEREIVSYVHQVCEALQFL 118
Query: 432 -CPKIIHRDIKSSNILLDENLEPHVS--DFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488
I H DI+ NI+ + +FG A+ L + A Y APE Q
Sbjct: 119 HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE--YYAPEVHQ 176
Query: 489 SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548
+ +D++S G L+ L++G +P + ++ N + E ++ K +
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSG---INPFLAETNQQIIE--NIMNAEYTFDEEAFKEIS 231
Query: 549 DADMETVEAIL--EIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSDFY 596
M+ V+ +L E +R T + P + Q ++ + +V+ Y
Sbjct: 232 IEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRY 281
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDEN--LEPHVSDFGLAK---LLVDEEAHVTTVVAG 477
L YLH+ I HRDIK N L N E + DFGL+K L + E + T AG
Sbjct: 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236
Query: 478 TFGYLAPEYLQSGRAT--EKSDVYSFGVLLLELVTGKRP 514
T ++APE L + + K D +S GVLL L+ G P
Sbjct: 237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 85/207 (41%), Gaps = 31/207 (14%)
Query: 319 VGSGGFGTVYRMVMNDCGTF--------AVKRIDRSREGSDQVFE--RELEILGSIKHIN 368
+GSG G V C F AVK++ R + REL +L + H N
Sbjct: 32 IGSGAQGIV-------CAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKN 84
Query: 369 LVNLRGYCRLPATKLLIYD-YLSMGSLDDFLHE--HGEGQQLLNWSARLKIALGSAR-GL 424
+++L T D YL M +D L + H E R+ L G+
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH-----ERMSYLLYQMLCGI 139
Query: 425 AYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAP 484
+LH IIHRD+K SNI++ + + DFGLA+ VV T Y AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV--TRYYRAP 194
Query: 485 EYLQSGRATEKSDVYSFGVLLLELVTG 511
E + D++S G ++ ELV G
Sbjct: 195 EVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 37/210 (17%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y ++ A+K++ R + REL ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 374 GYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR--------- 422
P L + Y+ M +D N S +++ L R
Sbjct: 90 N-VFTPQKSLEEFQDVYIVMELMD------------ANLSQVIQMELDHERMSYLLYQML 136
Query: 423 -GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
G+ +LH IIHRD+K SNI++ + + DFGLA+ + + T T Y
Sbjct: 137 VGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTG 511
APE + E D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQ--VIQMELDHERMSYLLYQMLCGIKHLH---S 144
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 203 KENVDIWSVGCIMGEMVRHK 222
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 37/210 (17%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y ++ A+K++ R + REL ++ + H N++ L
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 374 GYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR--------- 422
P L + Y+ M +D N S +++ L R
Sbjct: 90 N-VFTPQKSLEEFQDVYIVMELMD------------ANLSQVIQMELDHERMSYLLYQML 136
Query: 423 -GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
G+ +LH IIHRD+K SNI++ + + DFGLA+ + + T T Y
Sbjct: 137 VGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTG 511
APE + E D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 44/293 (15%)
Query: 317 DVVGSGGFGTVYRMV-MNDCGTFAVKRIDRSREGSDQVFERELEILGSIK-HINLVNLRG 374
+++G G + V V + + +AVK I++ S RE+E L + + N++ L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ L+++ L GS+ H + Q+ N ++ A L +LH
Sbjct: 79 FFEDDTRFYLVFEKLQGGSI----LAHIQKQKHFNEREASRVVRDVAAALDFLH---TKG 131
Query: 435 IIHRDIKSSNILLD--ENLEP-HVSDFGLAK--LLVDEEAHVT----TVVAGTFGYLAPE 485
I HRD+K NIL + E + P + DF L L + +T T G+ Y+APE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 486 YLQ--SGRAT---EKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGW---------MN 531
++ + +AT ++ D++S GV+L +++G P FV GW N
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGY----PPFVGHCGADCGWDRGEVCRVCQN 247
Query: 532 TL---LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581
L ++E + E DK A E + I ++ R + R S QVLQ
Sbjct: 248 KLFESIQEGKYE-FPDKDWAHISSEAKDLISKLLVR----DAKQRLSAAQVLQ 295
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 27/231 (11%)
Query: 315 EEDVVGSGGFGTVYRMV-MNDCGTFAVKRIDRSREGSDQVFERELEILGSIK-HINLVNL 372
+EDV+G G V + + +AVK I++ RE+E+L + H N++ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
+ L+++ + GS+ +H+ ++ N + A L +LH+
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNK-- 130
Query: 433 PKIIHRDIKSSNILLDE--NLEP-HVSDFGLAK--LLVDEEAHVTT----VVAGTFGYLA 483
I HRD+K NIL + + P + DFGL L + + ++T G+ Y+A
Sbjct: 131 -GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 484 PEYLQ--SGRAT---EKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGW 529
PE ++ S A+ ++ D++S GV+L L++G P FV R + GW
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY----PPFVGRCGSDCGW 236
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSYLLYQMLCGIKHLH---S 182
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 183 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 241 KENVDIWSVGCIMGEMVRHK 260
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSYLLYQMLCGIKHLH---S 138
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 139 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 197 KENVDIWSVGCIMGEMVRHK 216
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSYLLYQMLCGIKHLH---S 144
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 203 KENVDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 31 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSYLLYQMLCGIKHLH---S 143
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 144 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 201
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 202 KENVDIWSVGCIMGEMVRHK 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSYLLYQMLCGIKHLH---S 145
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 204 KENVDIWSVGCIMGEMVRHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSYLLYQMLCGIKHLH---S 138
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 139 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 197 KENVDIWSVGCIMGEMVRHK 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSYLLYQMLCGIKHLH---S 145
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 204 KENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSYLLYQMLCGIKHLH---S 144
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 203 KENVDIWSVGCIMGEMVRHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSYLLYQMLCGIKHLH---S 137
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 138 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 196 KENVDIWSVGCIMGEMVRHK 215
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 21/215 (9%)
Query: 319 VGSGGFGTVY----RMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRG 374
+GSG +G V ++ + +K+ + + E+ +L + H N++ L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 375 YCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK 434
+ L+ + G L D + + ++ + + +K L G YLH
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMKQVLS---GTTYLHKH---N 141
Query: 435 IIHRDIKSSNILLDENLEP---HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR 491
I+HRD+K N+LL+ + DFGL+ E GT Y+APE L+ +
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAPEVLRK-K 198
Query: 492 ATEKSDVYSFGVLLLELVTGKRP----TDPTFVKR 522
EK DV+S GV+L L+ G P TD +KR
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKR 233
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSYLLYQMLCGIKHLH---S 144
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 203 KENVDIWSVGCIMGEMVRHK 222
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 111/291 (38%), Gaps = 74/291 (25%)
Query: 318 VVGSGGFGTVYR-MVMNDCGTFAVKRIDRSR-----EGSDQVF-ERELEILGSIK----H 366
++G GGFGTV+ + D A+K I R+R SD V E+ +L + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 367 INLVNLRGYCRLPATKLLIYDY-LSMGSLDDFLHEHG---EGQQLLNWSARLKIALGSAR 422
++ L + +L+ + L L D++ E G EG + G
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS--------RCFFGQV- 148
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLE-PHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
+A + H ++HRDIK NIL+D + DFG LL DE T GT Y
Sbjct: 149 -VAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---YTDFDGTRVY 204
Query: 482 LAPEYLQSGRATE-KSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLE 540
PE++ + + V+S G+LL ++V G P
Sbjct: 205 SPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF------------------------- 239
Query: 541 DVIDKRCADADMETVEAILEIAA-----------RCTDANPDDRPSMNQVL 580
+ D E +EA L A RC P RPS+ ++L
Sbjct: 240 --------ERDQEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y V++ A+K++ R + REL ++ + H N+++L
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 374 GYCRLPATKLLIYD-YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
T D YL M +D L + Q L+ + G+ +LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQ--VIQMELDHERMSYLLYQMLCGIKHLH---S 182
Query: 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA 492
IIHRD+K SNI++ + + DFGLA+ + + T T Y APE +
Sbjct: 183 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 493 TEKSDVYSFGVLLLELVTGK 512
E D++S G ++ E+V K
Sbjct: 241 KENVDIWSVGCIMGEMVRHK 260
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEP---HVSDFGLAKLLVDEEAHVTTVVAGTF 479
G YLH I+HRD+K N+LL+ + DFGL+ E GT
Sbjct: 116 GTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTA 170
Query: 480 GYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP----TDPTFVKR 522
Y+APE L+ + EK DV+S GV+L L+ G P TD +KR
Sbjct: 171 YYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKR 216
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 315 EEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS--DQVFEREL---EILGSIKHIN 368
E + +GSG FG+V++ V D +A+KR + GS +Q RE+ +LG +H +
Sbjct: 13 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG--QHSH 70
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
+V L+ +Y + GSL D + E+ + + L RGL Y+H
Sbjct: 71 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 130
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVS-------DFGLAKLL--VDEEAHVTTVVA--- 476
++H DIK SNI + P+ + D+ K++ + + HVT + +
Sbjct: 131 ---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 187
Query: 477 --GTFGYLAPEYLQSGRA-TEKSDVYSFGVLLL 506
G +LA E LQ K+D+++ + ++
Sbjct: 188 EEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 315 EEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS--DQVFEREL---EILGSIKHIN 368
E + +GSG FG+V++ V D +A+KR + GS +Q RE+ +LG +H +
Sbjct: 11 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG--QHSH 68
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
+V L+ +Y + GSL D + E+ + + L RGL Y+H
Sbjct: 69 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 128
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVS-------DFGLAKLL--VDEEAHVTTVVA--- 476
++H DIK SNI + P+ + D+ K++ + + HVT + +
Sbjct: 129 ---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 185
Query: 477 --GTFGYLAPEYLQSGRA-TEKSDVYSFGVLLLELVTGKRP 514
G +LA E LQ K+D+++ + ++ G P
Sbjct: 186 EEGDSRFLANEVLQENYTHLPKADIFALALTVV-XAAGAEP 225
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 315 EEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS--DQVFEREL---EILGSIKHIN 368
E + +GSG FG+V++ V D +A+KR + GS +Q RE+ +LG +H +
Sbjct: 13 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG--QHSH 70
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
+V L+ +Y + GSL D + E+ + + L RGL Y+H
Sbjct: 71 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 130
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVS-------DFGLAKLL--VDEEAHVTTVVA--- 476
++H DIK SNI + P+ + D+ K++ + + HVT + +
Sbjct: 131 ---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 187
Query: 477 --GTFGYLAPEYLQSGRA-TEKSDVYSFGVLLL 506
G +LA E LQ K+D+++ + ++
Sbjct: 188 EEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 315 EEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS--DQVFEREL---EILGSIKHIN 368
E + +GSG FG+V++ V D +A+KR + GS +Q RE+ +LG +H +
Sbjct: 15 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG--QHSH 72
Query: 369 LVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH 428
+V L+ +Y + GSL D + E+ + + L RGL Y+H
Sbjct: 73 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 132
Query: 429 HDCCPKIIHRDIKSSNILLDENLEPHVS-------DFGLAKLL--VDEEAHVTTVVA--- 476
++H DIK SNI + P+ + D+ K++ + + HVT + +
Sbjct: 133 ---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV 189
Query: 477 --GTFGYLAPEYLQSGRA-TEKSDVYSFGVLLL 506
G +LA E LQ K+D+++ + ++
Sbjct: 190 EEGDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTF---AVKRIDRSREGSDQVFERELEILGSIKHINLVNL 372
E+ +G G +G V V GT A K+I + F++E+EI+ S+ H N++ L
Sbjct: 14 ENTIGRGSWGEVKIAVQK--GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 71
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
L+ + + G L E +++ S +I +AY H
Sbjct: 72 YETFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHK--- 124
Query: 433 PKIIHRDIKSSNILL--DENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+ HRD+K N L D P + DFGLA + T V GT Y++P+ L+
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVLE- 181
Query: 490 GRATEKSDVYSFGVLLLELVTGKRP 514
G + D +S GV++ L+ G P
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPP 206
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 37/210 (17%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y ++ A+K++ R + REL ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 374 GYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR--------- 422
P L + Y+ M +D N S +++ L R
Sbjct: 90 N-VFTPQKSLEEFQDVYIVMELMD------------ANLSQVIQMELDHERMSYLLYQML 136
Query: 423 -GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
G+ +LH IIHRD+K SNI++ + + DFGLA+ + + T T Y
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTG 511
APE + E D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 37/210 (17%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y ++ A+K++ R + REL ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 374 GYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR--------- 422
P L + Y+ M +D N S +++ L R
Sbjct: 90 N-VFTPQKSLEEFQDVYIVMELMD------------ANLSQVIQMELDHERMSYLLYQML 136
Query: 423 -GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
G+ +LH IIHRD+K SNI++ + + DFGLA+ + + T T Y
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTG 511
APE + E D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 37/210 (17%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y ++ A+K++ R + REL ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILER--NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 374 GYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR--------- 422
P L + Y+ M +D N S +++ L R
Sbjct: 90 N-VFTPQKSLEEFQDVYIVMELMD------------ANLSQVIQMELDHERMSYLLYQML 136
Query: 423 -GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
G+ +LH IIHRD+K SNI++ + + DFGLA+ + + T T Y
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTG 511
APE + E D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 423 GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYL 482
G+ +LH IIHRD+K SNI++ + + DFGLA+ V VV T Y
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TRYYR 194
Query: 483 APEYLQSGRATEKSDVYSFGVLLLELVTG 511
APE + E D++S G ++ E++ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 37/210 (17%)
Query: 319 VGSGGFGTV---YRMVMNDCGTFAVKRIDRSREGSDQVFE--RELEILGSIKHINLVNLR 373
+GSG G V Y ++ A+K++ R + REL ++ + H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 374 GYCRLPATKLLIYD--YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR--------- 422
P L + Y+ M +D N S +++ L R
Sbjct: 90 N-VFTPQKSLEEFQDVYIVMELMD------------ANLSQVIQMELDHERMSYLLYQML 136
Query: 423 -GLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481
G+ +LH IIHRD+K SNI++ + + DFGLA+ + + T T Y
Sbjct: 137 VGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 482 LAPEYLQSGRATEKSDVYSFGVLLLELVTG 511
APE + E D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 316 EDVVGSGGFGTVYRMVMNDCGTF---AVKRIDRSREGSDQVFERELEILGSIKHINLVNL 372
E+ +G G +G V V GT A K+I + F++E+EI+ S+ H N++ L
Sbjct: 31 ENTIGRGSWGEVKIAVQK--GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 88
Query: 373 RGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC 432
L+ + + G L E +++ S +I +AY H
Sbjct: 89 YETFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHK--- 141
Query: 433 PKIIHRDIKSSNILL--DENLEP-HVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS 489
+ HRD+K N L D P + DFGLA + T V GT Y++P+ L+
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVLE- 198
Query: 490 GRATEKSDVYSFGVLLLELVTGKRP 514
G + D +S GV++ L+ G P
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 13/161 (8%)
Query: 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKS 442
L++ + L G L + + G+ ++ + ++G A + YLH I HRD+K
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA--IQYLH---SINIAHRDVKP 159
Query: 443 SNILLDE---NLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVY 499
N+L N ++DFG AK + T T Y+APE L + + D++
Sbjct: 160 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMW 217
Query: 500 SFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLE 540
S GV++ L+ G P + GL + M T ++ + E
Sbjct: 218 SLGVIMYILLCG---YPPFYSNHGLAISPGMKTRIRMGQYE 255
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,780,946
Number of Sequences: 62578
Number of extensions: 748967
Number of successful extensions: 4583
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 1774
Number of HSP's gapped (non-prelim): 1308
length of query: 603
length of database: 14,973,337
effective HSP length: 104
effective length of query: 499
effective length of database: 8,465,225
effective search space: 4224147275
effective search space used: 4224147275
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)