Query 007455
Match_columns 603
No_of_seqs 634 out of 5969
Neff 9.4
Searched_HMMs 29240
Date Tue Mar 26 02:15:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007455.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007455hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 4E-55 1.4E-59 438.7 14.3 259 311-587 13-288 (299)
2 4aoj_A High affinity nerve gro 100.0 1.8E-54 6E-59 440.0 17.7 261 311-589 41-320 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 6.4E-54 2.2E-58 431.9 16.9 258 311-586 26-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 3.7E-53 1.3E-57 424.5 19.3 259 310-587 35-299 (307)
5 4b9d_A Serine/threonine-protei 100.0 3.5E-53 1.2E-57 430.6 14.3 251 310-581 23-276 (350)
6 4fih_A Serine/threonine-protei 100.0 8.9E-53 3.1E-57 426.9 15.5 249 311-581 74-323 (346)
7 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.9E-53 2E-57 421.9 12.0 247 311-580 32-283 (311)
8 4g3f_A NF-kappa-beta-inducing 100.0 4.8E-52 1.6E-56 420.4 15.9 252 310-586 57-314 (336)
9 3hyh_A Carbon catabolite-derep 100.0 8.5E-52 2.9E-56 408.0 16.0 246 310-581 12-262 (275)
10 4fie_A Serine/threonine-protei 100.0 1.6E-51 5.5E-56 427.9 17.3 249 311-581 151-400 (423)
11 4ase_A Vascular endothelial gr 100.0 6.2E-52 2.1E-56 424.7 13.4 272 300-588 53-347 (353)
12 3fpq_A Serine/threonine-protei 100.0 1.9E-51 6.6E-56 409.1 15.9 246 314-581 29-282 (290)
13 3hmm_A TGF-beta receptor type- 100.0 3.6E-51 1.2E-55 412.7 16.7 267 311-588 3-297 (303)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.2E-51 4.1E-56 412.5 9.6 247 311-581 24-281 (304)
15 4g31_A Eukaryotic translation 100.0 1.2E-49 4E-54 399.8 15.5 251 310-581 4-279 (299)
16 3uim_A Brassinosteroid insensi 100.0 7.7E-47 2.6E-51 386.8 21.0 299 300-598 19-321 (326)
17 2qkw_B Protein kinase; three-h 100.0 3.2E-46 1.1E-50 381.4 22.8 283 302-587 30-314 (321)
18 4b99_A Mitogen-activated prote 100.0 7.2E-47 2.5E-51 393.8 17.2 260 311-581 54-344 (398)
19 4f9c_A Cell division cycle 7-r 100.0 5E-46 1.7E-50 383.4 19.7 196 310-517 20-249 (361)
20 3v5w_A G-protein coupled recep 100.0 6.7E-46 2.3E-50 402.5 15.7 249 310-581 188-449 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 1.7E-45 5.8E-50 402.1 17.7 252 310-581 156-410 (573)
22 3fxz_A Serine/threonine-protei 100.0 2.1E-43 7.1E-48 356.4 19.9 250 310-581 19-269 (297)
23 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-43 4.5E-48 360.2 17.1 259 310-587 9-281 (310)
24 3zgw_A Maternal embryonic leuc 100.0 6.8E-44 2.3E-48 366.8 15.0 249 310-581 9-260 (347)
25 3p86_A Serine/threonine-protei 100.0 1.7E-43 5.7E-48 359.1 17.1 261 310-590 36-300 (309)
26 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.9E-43 1E-47 349.7 18.3 256 310-587 7-263 (268)
27 3fe3_A MAP/microtubule affinit 100.0 1.4E-43 4.8E-48 362.3 15.8 247 310-581 14-264 (328)
28 2nru_A Interleukin-1 receptor- 100.0 6.3E-42 2.1E-46 347.2 27.7 280 300-587 14-305 (307)
29 4hcu_A Tyrosine-protein kinase 100.0 1.5E-43 5.2E-48 352.1 15.5 255 311-587 10-265 (269)
30 3kul_A Ephrin type-A receptor 100.0 2.3E-43 7.8E-48 360.7 16.8 261 311-592 49-317 (325)
31 4eqm_A Protein kinase; transfe 100.0 4.4E-43 1.5E-47 353.5 17.1 262 311-590 11-277 (294)
32 2psq_A Fibroblast growth facto 100.0 5.1E-43 1.7E-47 364.5 17.6 260 310-587 80-363 (370)
33 2c30_A Serine/threonine-protei 100.0 2.8E-42 9.5E-47 352.0 21.2 259 301-581 25-294 (321)
34 1o6l_A RAC-beta serine/threoni 100.0 1.3E-42 4.5E-47 356.1 17.7 248 310-581 4-260 (337)
35 3gen_A Tyrosine-protein kinase 100.0 8E-43 2.8E-47 349.5 15.6 256 310-587 23-279 (283)
36 2qol_A Ephrin receptor; recept 100.0 8E-43 2.7E-47 363.3 15.2 259 310-589 44-310 (373)
37 1qcf_A Haematopoetic cell kina 100.0 6.8E-43 2.3E-47 373.6 14.9 258 310-589 187-445 (454)
38 2yab_A Death-associated protei 100.0 4.8E-42 1.6E-46 355.2 20.1 251 310-581 11-272 (361)
39 3cbl_A C-FES, proto-oncogene t 100.0 7.9E-43 2.7E-47 364.2 14.1 257 310-587 113-373 (377)
40 3soc_A Activin receptor type-2 100.0 6.3E-43 2.1E-47 357.1 13.0 266 310-587 23-317 (322)
41 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.6E-42 5.4E-47 370.4 16.0 260 311-592 184-444 (452)
42 3ugc_A Tyrosine-protein kinase 100.0 1.6E-42 5.4E-47 349.5 14.5 267 311-587 10-290 (295)
43 3t9t_A Tyrosine-protein kinase 100.0 2.4E-42 8.2E-47 342.8 15.3 255 311-587 8-263 (267)
44 1mp8_A Focal adhesion kinase 1 100.0 2E-42 6.9E-47 346.3 14.7 256 310-587 14-275 (281)
45 1luf_A Muscle-specific tyrosin 100.0 2.9E-42 9.9E-47 355.3 16.2 261 310-588 46-335 (343)
46 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.2E-42 7.5E-47 354.1 14.6 246 310-581 8-258 (336)
47 3qup_A Tyrosine-protein kinase 100.0 3.7E-42 1.3E-46 351.5 16.1 262 310-589 22-299 (323)
48 3tki_A Serine/threonine-protei 100.0 4.5E-42 1.5E-46 350.8 16.7 252 310-581 6-261 (323)
49 3tt0_A Basic fibroblast growth 100.0 4.6E-42 1.6E-46 359.1 17.1 260 310-587 68-351 (382)
50 1opk_A P150, C-ABL, proto-onco 100.0 3.3E-42 1.1E-46 371.9 16.4 259 310-589 219-479 (495)
51 3q4u_A Activin receptor type-1 100.0 1E-41 3.6E-46 344.4 19.1 259 310-586 7-300 (301)
52 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.2E-42 4.1E-47 358.7 12.3 249 309-581 21-280 (353)
53 4dc2_A Protein kinase C IOTA t 100.0 4.7E-42 1.6E-46 358.6 16.4 255 310-581 51-318 (396)
54 3c0i_A Peripheral plasma membr 100.0 5.8E-42 2E-46 354.1 16.7 254 311-581 24-286 (351)
55 1xjd_A Protein kinase C, theta 100.0 1.6E-42 5.4E-47 356.5 12.4 249 308-580 14-268 (345)
56 1tki_A Titin; serine kinase, m 100.0 1.2E-41 4.1E-46 347.2 18.6 250 311-581 5-257 (321)
57 1fot_A TPK1 delta, CAMP-depend 100.0 7.4E-42 2.5E-46 347.9 17.0 245 310-581 5-258 (318)
58 2ivs_A Proto-oncogene tyrosine 100.0 6.3E-42 2.1E-46 348.2 16.3 260 310-587 22-310 (314)
59 3niz_A Rhodanese family protei 100.0 7.1E-42 2.4E-46 347.5 16.6 261 310-581 20-300 (311)
60 1qpc_A LCK kinase; alpha beta 100.0 1E-41 3.5E-46 340.6 17.3 256 310-587 12-268 (279)
61 3poz_A Epidermal growth factor 100.0 4.7E-42 1.6E-46 351.4 15.2 255 311-587 15-277 (327)
62 3dtc_A Mitogen-activated prote 100.0 7.3E-42 2.5E-46 340.2 16.1 253 310-585 6-270 (271)
63 4euu_A Serine/threonine-protei 100.0 3.7E-41 1.3E-45 343.6 21.7 270 311-588 9-309 (319)
64 3qd2_B Eukaryotic translation 100.0 7.8E-42 2.7E-46 350.1 16.6 251 310-581 5-325 (332)
65 3lb7_A RAF proto-oncogene seri 100.0 1.2E-41 4.1E-46 345.1 17.6 260 310-588 35-300 (307)
66 1k9a_A Carboxyl-terminal SRC k 100.0 1.4E-41 4.7E-46 363.0 19.0 251 310-587 192-444 (450)
67 3l9p_A Anaplastic lymphoma kin 100.0 2.4E-42 8.2E-47 359.1 12.7 259 311-587 71-344 (367)
68 2y0a_A Death-associated protei 100.0 2E-41 6.7E-46 346.6 19.1 249 311-581 11-271 (326)
69 2zv2_A Calcium/calmodulin-depe 100.0 1.9E-41 6.6E-46 342.1 18.8 249 310-581 12-292 (298)
70 3soa_A Calcium/calmodulin-depe 100.0 1.4E-41 4.7E-46 360.9 18.5 252 310-581 10-267 (444)
71 3vhe_A Vascular endothelial gr 100.0 2.8E-42 9.7E-47 357.7 12.9 268 303-587 14-354 (359)
72 4fvq_A Tyrosine-protein kinase 100.0 2E-42 7E-47 347.5 11.3 253 311-590 8-277 (289)
73 4aw2_A Serine/threonine-protei 100.0 3.3E-42 1.1E-46 364.4 13.2 256 309-581 72-338 (437)
74 4fr4_A YANK1, serine/threonine 100.0 8E-42 2.7E-46 355.6 15.7 250 310-581 14-271 (384)
75 1csn_A Casein kinase-1; phosph 100.0 3.6E-41 1.2E-45 339.9 20.0 260 311-587 10-282 (298)
76 2izr_A Casein kinase I isoform 100.0 2.2E-41 7.7E-46 346.9 18.4 259 311-587 9-280 (330)
77 1rdq_E PKA C-alpha, CAMP-depen 100.0 1E-41 3.4E-46 351.6 15.8 245 310-581 40-293 (350)
78 3kfa_A Tyrosine-protein kinase 100.0 1E-41 3.4E-46 342.3 15.3 257 310-587 12-270 (288)
79 2bdw_A Hypothetical protein K1 100.0 1.7E-41 5.9E-46 351.8 17.3 251 310-581 28-284 (362)
80 1ob3_A PFPK5, cell division co 100.0 9.6E-42 3.3E-46 342.6 14.8 260 311-581 2-280 (288)
81 3a62_A Ribosomal protein S6 ki 100.0 1.6E-41 5.5E-46 347.4 16.7 248 310-581 16-276 (327)
82 3a8x_A Protein kinase C IOTA t 100.0 1.6E-41 5.3E-46 349.6 16.6 255 310-581 8-275 (345)
83 1kob_A Twitchin; kinase, intra 100.0 2E-41 6.8E-46 353.7 17.5 252 310-581 50-304 (387)
84 4e5w_A Tyrosine-protein kinase 100.0 3E-42 1E-46 348.6 10.8 262 311-586 21-300 (302)
85 1rjb_A FL cytokine receptor; k 100.0 1.8E-41 6.2E-46 349.6 16.4 265 310-591 44-337 (344)
86 2v62_A Serine/threonine-protei 100.0 1.6E-41 5.4E-46 350.2 15.8 275 311-598 37-338 (345)
87 2h8h_A Proto-oncogene tyrosine 100.0 7E-42 2.4E-46 372.8 13.7 258 310-589 266-524 (535)
88 2i0e_A Protein kinase C-beta I 100.0 1.6E-41 5.5E-46 350.1 15.6 249 309-581 18-276 (353)
89 3cc6_A Protein tyrosine kinase 100.0 1.6E-41 5.4E-46 339.8 15.0 256 310-587 11-272 (281)
90 3c1x_A Hepatocyte growth facto 100.0 1.8E-41 6.2E-46 352.7 16.0 266 312-598 90-365 (373)
91 3v8s_A RHO-associated protein 100.0 3.1E-42 1.1E-46 361.8 10.3 253 309-581 67-329 (410)
92 3kmu_A ILK, integrin-linked ki 100.0 4E-41 1.4E-45 334.6 17.3 252 310-587 9-269 (271)
93 3kex_A Receptor tyrosine-prote 100.0 7.6E-42 2.6E-46 349.6 12.4 256 311-588 13-276 (325)
94 2eue_A Carbon catabolite derep 100.0 2.6E-41 8.7E-46 337.1 15.8 246 310-581 12-262 (275)
95 3f66_A Hepatocyte growth facto 100.0 5.2E-41 1.8E-45 338.9 18.2 258 311-589 25-292 (298)
96 3f3z_A Calcium/calmodulin-depe 100.0 5.1E-41 1.7E-45 335.3 17.5 246 310-581 8-261 (277)
97 3og7_A AKAP9-BRAF fusion prote 100.0 2.9E-41 1E-45 339.3 15.9 258 311-587 24-287 (289)
98 2h34_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 342.2 16.5 262 309-590 32-298 (309)
99 3o0g_A Cell division protein k 100.0 5.9E-41 2E-45 337.6 18.1 258 311-581 2-282 (292)
100 2buj_A Serine/threonine-protei 100.0 3.6E-41 1.2E-45 343.2 16.6 265 311-591 29-309 (317)
101 2pvf_A Fibroblast growth facto 100.0 2.4E-41 8.3E-46 347.2 15.4 261 310-588 34-318 (334)
102 2vgo_A Serine/threonine-protei 100.0 5.2E-41 1.8E-45 336.5 17.4 265 310-600 13-283 (284)
103 4f0f_A Serine/threonine-protei 100.0 6.3E-41 2.1E-45 336.4 18.0 252 311-586 19-287 (287)
104 1t46_A HOMO sapiens V-KIT hard 100.0 3E-41 1E-45 343.0 15.8 261 310-587 22-306 (313)
105 2eva_A TAK1 kinase - TAB1 chim 100.0 4.5E-41 1.5E-45 341.0 17.0 254 311-587 8-262 (307)
106 3lxl_A Tyrosine-protein kinase 100.0 6E-42 2.1E-46 350.6 10.6 271 311-588 23-303 (327)
107 3lzb_A Epidermal growth factor 100.0 3.8E-41 1.3E-45 344.6 16.3 257 311-589 15-279 (327)
108 2y94_A 5'-AMP-activated protei 100.0 3.4E-41 1.2E-45 360.3 16.6 251 310-585 15-272 (476)
109 3fdn_A Serine/threonine-protei 100.0 2.8E-41 9.6E-46 337.6 14.4 246 310-581 8-257 (279)
110 3op5_A Serine/threonine-protei 100.0 2.3E-41 7.9E-46 351.6 14.1 266 310-587 34-328 (364)
111 3hko_A Calcium/calmodulin-depe 100.0 4.6E-41 1.6E-45 346.7 15.9 262 305-581 20-330 (345)
112 4ejn_A RAC-alpha serine/threon 100.0 1.4E-41 4.8E-46 362.8 12.4 248 310-581 147-404 (446)
113 1mqb_A Ephrin type-A receptor 100.0 5.3E-41 1.8E-45 344.5 16.1 257 311-588 44-309 (333)
114 1u59_A Tyrosine-protein kinase 100.0 3.8E-41 1.3E-45 338.0 14.8 257 311-589 9-273 (287)
115 2w4o_A Calcium/calmodulin-depe 100.0 4.4E-41 1.5E-45 347.1 15.6 250 310-581 52-305 (349)
116 2pmi_A Negative RE, cyclin-dep 100.0 4.6E-41 1.6E-45 342.5 15.5 264 310-581 4-293 (317)
117 3lxp_A Non-receptor tyrosine-p 100.0 3E-41 1E-45 344.0 14.1 266 313-587 33-309 (318)
118 3ork_A Serine/threonine protei 100.0 7.9E-41 2.7E-45 339.8 16.9 256 311-585 12-278 (311)
119 2ac3_A MAP kinase-interacting 100.0 8.2E-41 2.8E-45 340.4 17.0 262 311-581 12-295 (316)
120 3uc3_A Serine/threonine-protei 100.0 1.1E-40 3.7E-45 345.8 18.1 252 310-581 19-274 (361)
121 2vd5_A DMPK protein; serine/th 100.0 2E-41 6.9E-46 355.9 12.7 255 309-581 59-327 (412)
122 2x4f_A Myosin light chain kina 100.0 4.9E-41 1.7E-45 349.6 15.6 247 315-581 93-342 (373)
123 3kn6_A Ribosomal protein S6 ki 100.0 3.7E-41 1.3E-45 344.3 14.0 248 316-581 16-270 (325)
124 3pls_A Macrophage-stimulating 100.0 1.2E-40 4.2E-45 336.0 17.5 258 312-589 22-288 (298)
125 2a2a_A Death-associated protei 100.0 1.5E-40 5.1E-45 339.4 18.2 251 310-581 11-272 (321)
126 3gni_B Strad alpha; kinase fol 100.0 1.6E-40 5.6E-45 348.4 19.0 265 310-581 24-333 (389)
127 2r5t_A Serine/threonine-protei 100.0 2E-41 6.8E-46 351.9 11.9 245 310-578 37-286 (373)
128 1p4o_A Insulin-like growth fac 100.0 5.2E-41 1.8E-45 342.8 14.7 262 309-588 23-299 (322)
129 3cok_A Serine/threonine-protei 100.0 8.6E-41 2.9E-45 333.8 15.9 250 309-581 9-262 (278)
130 2w5a_A Serine/threonine-protei 100.0 2.3E-41 7.9E-46 338.1 11.5 257 310-585 5-271 (279)
131 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-40 4.1E-45 338.5 16.9 244 311-581 57-304 (311)
132 1fvr_A Tyrosine-protein kinase 100.0 6.5E-41 2.2E-45 343.0 14.7 259 310-588 24-300 (327)
133 4agu_A Cyclin-dependent kinase 100.0 2.7E-40 9.3E-45 335.8 19.1 261 310-581 2-284 (311)
134 1xbb_A Tyrosine-protein kinase 100.0 1.1E-40 3.7E-45 335.5 15.9 254 311-587 16-278 (291)
135 2wqm_A Serine/threonine-protei 100.0 1E-40 3.4E-45 338.9 15.8 262 310-587 31-296 (310)
136 3dbq_A Dual specificity protei 100.0 5.8E-41 2E-45 345.6 14.2 249 311-581 9-273 (343)
137 3kk8_A Calcium/calmodulin depe 100.0 2.1E-40 7.2E-45 332.0 17.8 250 311-581 6-261 (284)
138 4hgt_A Casein kinase I isoform 100.0 4.9E-40 1.7E-44 331.2 20.4 261 310-587 8-279 (296)
139 3is5_A Calcium-dependent prote 100.0 8.6E-41 2.9E-45 335.2 14.7 253 310-581 21-278 (285)
140 2acx_A G protein-coupled recep 100.0 7.6E-41 2.6E-45 362.4 15.4 253 310-581 183-444 (576)
141 3dls_A PAS domain-containing s 100.0 8.2E-41 2.8E-45 343.1 14.8 242 309-581 22-274 (335)
142 1vzo_A Ribosomal protein S6 ki 100.0 2.9E-41 1E-45 349.4 11.6 253 310-581 53-321 (355)
143 1x8b_A WEE1HU, WEE1-like prote 100.0 8.6E-41 3E-45 335.1 14.4 246 310-581 10-279 (289)
144 3brb_A Proto-oncogene tyrosine 100.0 1.8E-40 6.1E-45 337.5 16.9 260 310-587 33-307 (313)
145 2xir_A Vascular endothelial gr 100.0 6.6E-41 2.3E-45 340.9 13.7 263 308-587 24-309 (316)
146 3uzp_A CKI-delta, CKID, casein 100.0 6.4E-40 2.2E-44 330.4 20.8 260 311-587 9-279 (296)
147 2yex_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44 329.1 18.3 252 310-581 6-261 (276)
148 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-40 4E-45 360.2 16.0 256 310-581 184-448 (543)
149 2ozo_A Tyrosine-protein kinase 100.0 1.5E-40 5.2E-45 367.4 17.1 248 318-587 343-597 (613)
150 3ttj_A Mitogen-activated prote 100.0 4.4E-40 1.5E-44 352.0 19.6 255 310-581 61-355 (464)
151 2qr7_A Ribosomal protein S6 ki 100.0 1.1E-40 3.8E-45 342.8 14.4 251 310-581 21-277 (342)
152 2i1m_A Macrophage colony-stimu 100.0 4.9E-41 1.7E-45 344.7 11.7 261 310-587 45-325 (333)
153 1byg_A CSK, protein (C-termina 100.0 8.9E-41 3.1E-45 333.7 13.2 251 310-587 20-272 (278)
154 2zmd_A Dual specificity protei 100.0 1.7E-40 5.7E-45 347.9 15.8 249 311-581 56-320 (390)
155 3gxj_A TGF-beta receptor type- 100.0 5.7E-42 1.9E-46 346.6 4.2 264 311-590 3-299 (303)
156 2w1i_A JAK2; chromosomal rearr 100.0 2.3E-40 7.9E-45 338.7 16.2 266 311-587 41-321 (326)
157 3mdy_A Bone morphogenetic prot 100.0 1.2E-39 4.3E-44 334.7 21.7 267 308-589 34-332 (337)
158 3bhy_A Death-associated protei 100.0 7.3E-40 2.5E-44 327.9 19.4 250 311-581 5-265 (283)
159 2rku_A Serine/threonine-protei 100.0 1.5E-40 5.1E-45 335.0 14.3 253 310-586 14-272 (294)
160 3llt_A Serine/threonine kinase 100.0 6.2E-40 2.1E-44 340.3 19.3 198 310-518 34-262 (360)
161 2h6d_A 5'-AMP-activated protei 100.0 2.3E-40 8E-45 330.2 15.4 247 310-581 10-261 (276)
162 1nxk_A MAP kinase-activated pr 100.0 3.4E-40 1.2E-44 346.6 17.3 251 310-581 60-321 (400)
163 4eut_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44 346.4 17.5 271 311-589 9-310 (396)
164 3g2f_A Bone morphogenetic prot 100.0 1.4E-40 4.8E-45 341.7 13.9 272 310-591 12-321 (336)
165 1b6c_B TGF-B superfamily recep 100.0 1.4E-39 4.7E-44 335.1 21.3 264 307-588 38-336 (342)
166 3i6u_A CDS1, serine/threonine- 100.0 5.5E-40 1.9E-44 347.3 18.7 252 309-581 133-399 (419)
167 3g33_A Cell division protein k 100.0 2.1E-40 7.1E-45 336.2 14.8 261 310-581 8-296 (308)
168 2jam_A Calcium/calmodulin-depe 100.0 2.3E-40 7.9E-45 335.2 15.1 250 310-581 8-261 (304)
169 1u5q_A Serine/threonine protei 100.0 2.9E-40 9.9E-45 340.7 15.8 245 311-581 54-305 (348)
170 2owb_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45 341.4 13.4 253 310-586 40-298 (335)
171 4fl3_A Tyrosine-protein kinase 100.0 2.6E-40 8.8E-45 366.4 16.1 247 317-586 375-629 (635)
172 3a7i_A MST3 kinase, serine/thr 100.0 5.2E-40 1.8E-44 332.5 16.9 247 311-581 22-270 (303)
173 3byv_A Rhoptry kinase; malaria 100.0 1.2E-40 4E-45 347.9 12.4 243 310-581 72-359 (377)
174 2clq_A Mitogen-activated prote 100.0 8.7E-40 3E-44 329.3 18.0 253 311-581 22-278 (295)
175 3oz6_A Mitogen-activated prote 100.0 3.7E-40 1.2E-44 345.6 15.6 261 309-581 7-328 (388)
176 3mtl_A Cell division protein k 100.0 5E-41 1.7E-45 343.3 8.8 260 311-581 2-281 (324)
177 2yfx_A Tyrosine-protein kinase 100.0 3.2E-40 1.1E-44 337.8 14.4 260 310-587 29-303 (327)
178 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.3E-40 8E-45 339.1 13.2 258 309-581 32-318 (329)
179 3nsz_A CK II alpha, casein kin 100.0 1.4E-39 4.9E-44 333.3 18.9 254 311-581 36-319 (330)
180 2jii_A Serine/threonine-protei 100.0 2.5E-40 8.7E-45 342.1 13.4 261 311-587 42-335 (352)
181 2a19_B Interferon-induced, dou 100.0 2.8E-40 9.5E-45 330.9 13.2 252 310-592 10-278 (284)
182 2pml_X PFPK7, Ser/Thr protein 100.0 5.9E-40 2E-44 338.8 16.0 257 310-581 30-322 (348)
183 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.8E-40 2.3E-44 340.7 16.5 252 310-587 64-338 (365)
184 1u46_A ACK-1, activated CDC42 100.0 2.3E-40 7.8E-45 332.9 12.4 262 311-593 18-289 (291)
185 3n9x_A Phosphotransferase; mal 100.0 1.1E-39 3.7E-44 346.6 18.3 198 311-516 26-253 (432)
186 3rp9_A Mitogen-activated prote 100.0 3.9E-40 1.3E-44 353.1 14.8 193 311-511 53-280 (458)
187 3pfq_A PKC-B, PKC-beta, protei 100.0 3.9E-40 1.3E-44 367.5 15.2 249 309-581 339-597 (674)
188 2y7j_A Phosphorylase B kinase 100.0 3.4E-39 1.2E-43 335.1 21.2 253 308-581 91-359 (365)
189 3eqc_A Dual specificity mitoge 100.0 7.3E-40 2.5E-44 339.8 15.7 262 311-581 33-324 (360)
190 3sv0_A Casein kinase I-like; t 100.0 2.9E-39 1E-43 345.9 20.8 262 311-589 7-279 (483)
191 1cm8_A Phosphorylated MAP kina 100.0 1.9E-39 6.6E-44 337.1 18.8 252 311-581 25-307 (367)
192 2wtk_C Serine/threonine-protei 100.0 2.1E-39 7E-44 328.3 18.5 254 310-585 4-269 (305)
193 1ua2_A CAK, cell division prot 100.0 1.9E-39 6.4E-44 334.8 18.1 260 308-581 7-291 (346)
194 3nyv_A Calmodulin-domain prote 100.0 6.7E-40 2.3E-44 353.8 15.0 250 310-581 25-281 (484)
195 4aaa_A Cyclin-dependent kinase 100.0 1E-39 3.5E-44 334.6 15.4 262 310-581 24-306 (331)
196 3lm5_A Serine/threonine-protei 100.0 1.7E-39 5.9E-44 332.3 16.9 253 310-581 27-287 (327)
197 3mwu_A Calmodulin-domain prote 100.0 1.3E-39 4.6E-44 351.4 16.9 250 310-581 21-276 (486)
198 3q5i_A Protein kinase; CDPK, m 100.0 2E-39 6.8E-44 351.6 18.0 250 310-581 35-301 (504)
199 3lij_A Calcium/calmodulin depe 100.0 1.4E-39 4.8E-44 351.9 16.7 250 310-581 36-291 (494)
200 1t4h_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43 323.4 19.1 246 312-581 27-282 (290)
201 3ll6_A Cyclin G-associated kin 100.0 5.1E-40 1.7E-44 337.4 12.3 254 311-587 28-307 (337)
202 3mi9_A Cell division protein k 100.0 1.4E-39 4.8E-44 336.5 15.6 262 310-581 16-311 (351)
203 2ycf_A Serine/threonine-protei 100.0 3E-39 1E-43 329.8 17.8 251 310-581 9-274 (322)
204 2j7t_A Serine/threonine-protei 100.0 1.6E-39 5.4E-44 328.6 15.4 252 310-581 18-275 (302)
205 2j0j_A Focal adhesion kinase 1 100.0 1.3E-39 4.6E-44 362.1 15.9 256 310-587 389-650 (656)
206 3com_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 328.4 17.0 250 310-581 28-278 (314)
207 2xrw_A Mitogen-activated prote 100.0 3.6E-39 1.2E-43 335.9 17.8 255 310-581 24-318 (371)
208 3pg1_A Mitogen-activated prote 100.0 1.5E-39 5.2E-44 337.7 14.9 265 305-581 16-316 (362)
209 2r3i_A Cell division protein k 100.0 4.5E-39 1.5E-43 324.8 17.6 259 310-581 2-283 (299)
210 2vwi_A Serine/threonine-protei 100.0 6E-40 2.1E-44 331.7 11.0 263 310-581 14-287 (303)
211 3fme_A Dual specificity mitoge 100.0 1.2E-39 4.2E-44 327.3 13.2 254 310-581 6-266 (290)
212 3qyz_A Mitogen-activated prote 100.0 7.1E-39 2.4E-43 332.9 19.0 259 311-581 27-313 (364)
213 2y4i_B KSR2, HKSR2, kinase sup 100.0 7.4E-40 2.5E-44 333.7 11.0 266 310-598 32-316 (319)
214 3kvw_A DYRK2, dual specificity 100.0 5.4E-39 1.8E-43 340.6 18.0 197 311-518 97-302 (429)
215 1phk_A Phosphorylase kinase; g 100.0 4.3E-39 1.5E-43 324.8 16.3 251 310-581 16-283 (298)
216 3an0_A Dual specificity mitoge 100.0 1.6E-39 5.6E-44 334.4 13.4 253 310-581 50-310 (340)
217 2fst_X Mitogen-activated prote 100.0 7.9E-40 2.7E-44 339.8 11.0 255 311-581 29-311 (367)
218 3eb0_A Putative uncharacterize 100.0 2.4E-39 8.3E-44 338.7 14.6 260 309-581 5-321 (383)
219 1wak_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 335.2 19.2 261 311-581 37-391 (397)
220 3q60_A ROP5B; pseudokinase, tr 100.0 1.5E-39 5E-44 338.9 12.3 252 311-581 62-352 (371)
221 4e7w_A Glycogen synthase kinas 100.0 1.2E-39 3.9E-44 342.1 11.6 258 311-581 40-321 (394)
222 2i6l_A Mitogen-activated prote 100.0 4.1E-39 1.4E-43 328.1 14.7 264 311-589 11-315 (320)
223 3e3p_A Protein kinase, putativ 100.0 2.5E-39 8.6E-44 335.7 12.6 269 304-581 16-314 (360)
224 3rgf_A Cyclin-dependent kinase 100.0 2.5E-39 8.5E-44 341.2 12.5 264 312-581 21-333 (405)
225 2x7f_A TRAF2 and NCK-interacti 100.0 8.9E-39 3.1E-43 326.8 15.9 252 309-581 22-286 (326)
226 1z57_A Dual specificity protei 100.0 9.7E-39 3.3E-43 328.0 16.1 257 311-581 14-328 (339)
227 1j1b_A Glycogen synthase kinas 100.0 1.9E-39 6.3E-44 343.4 11.0 258 311-581 54-336 (420)
228 4exu_A Mitogen-activated prote 100.0 2.7E-38 9.1E-43 329.3 19.1 254 311-581 42-323 (371)
229 1zy4_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 322.1 15.2 251 310-581 5-283 (303)
230 2wei_A Calmodulin-domain prote 100.0 1.5E-38 5.2E-43 319.1 16.0 251 309-581 20-276 (287)
231 3coi_A Mitogen-activated prote 100.0 6.5E-38 2.2E-42 324.2 21.0 251 311-581 24-305 (353)
232 1blx_A Cyclin-dependent kinase 100.0 2.1E-38 7.3E-43 323.9 16.6 261 310-581 10-296 (326)
233 3cek_A Dual specificity protei 100.0 1.4E-38 4.8E-43 323.5 14.7 250 310-581 27-292 (313)
234 2b9h_A MAP kinase FUS3, mitoge 100.0 9.7E-39 3.3E-43 330.3 13.6 259 311-581 11-305 (353)
235 1q8y_A SR protein kinase; tran 100.0 3.9E-38 1.3E-42 328.3 17.6 260 311-581 19-333 (373)
236 2iwi_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 323.6 13.0 240 310-581 30-283 (312)
237 2vx3_A Dual specificity tyrosi 100.0 7.6E-38 2.6E-42 327.2 17.9 200 310-518 53-261 (382)
238 3a99_A Proto-oncogene serine/t 100.0 8.8E-39 3E-43 326.1 10.1 240 310-581 42-293 (320)
239 2eu9_A Dual specificity protei 100.0 9.6E-38 3.3E-42 322.8 17.5 257 311-581 19-333 (355)
240 3fhr_A MAP kinase-activated pr 100.0 5.1E-38 1.7E-42 322.6 14.8 258 310-587 27-295 (336)
241 2rio_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42 334.6 13.7 250 314-581 18-295 (434)
242 3aln_A Dual specificity mitoge 100.0 5.4E-38 1.8E-42 321.2 13.7 252 311-581 22-285 (327)
243 3p23_A Serine/threonine-protei 100.0 6.7E-38 2.3E-42 332.0 13.9 248 311-581 24-283 (432)
244 2dyl_A Dual specificity mitoge 100.0 6E-37 2.1E-41 312.0 16.6 252 310-581 24-283 (318)
245 3qa8_A MGC80376 protein; kinas 100.0 1.6E-37 5.5E-42 339.6 11.1 260 309-579 12-295 (676)
246 3uqc_A Probable conserved tran 100.0 8.6E-37 2.9E-41 305.9 14.8 231 311-591 31-268 (286)
247 2pzi_A Probable serine/threoni 100.0 1.8E-36 6.3E-41 339.9 17.0 237 311-585 80-325 (681)
248 3m2w_A MAP kinase-activated pr 100.0 1.1E-35 3.6E-40 300.2 17.3 233 310-587 16-264 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 2.8E-36 9.5E-41 318.3 12.8 241 311-580 78-362 (413)
250 2vuw_A Serine/threonine-protei 100.0 3.3E-36 1.1E-40 309.2 11.8 240 310-580 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.3E-29 4.4E-34 276.7 5.8 184 319-514 242-437 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 3.5E-27 1.2E-31 239.3 12.6 173 25-199 3-184 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 6.3E-27 2.1E-31 254.1 9.8 184 314-515 339-538 (540)
254 3rgz_A Protein brassinosteroid 99.9 5.3E-24 1.8E-28 242.2 9.5 172 23-199 7-188 (768)
255 1zar_A RIO2 kinase; serine kin 99.9 3.8E-23 1.3E-27 205.8 11.3 146 310-488 89-252 (282)
256 4ecn_A Leucine-rich repeat pro 99.9 7.7E-24 2.6E-28 240.2 5.9 167 27-199 268-558 (876)
257 4fcg_A Uncharacterized protein 99.9 2.8E-23 9.5E-28 211.9 6.1 174 23-199 22-216 (328)
258 4eco_A Uncharacterized protein 99.9 6.1E-23 2.1E-27 228.2 8.5 170 27-199 29-315 (636)
259 3e6j_A Variable lymphocyte rec 99.9 8.2E-22 2.8E-26 190.2 13.4 152 54-212 15-176 (229)
260 2v9t_B SLIT homolog 2 protein 99.9 1.4E-21 4.6E-26 187.4 12.0 152 55-212 8-169 (220)
261 2o6s_A Variable lymphocyte rec 99.8 8.4E-21 2.9E-25 180.3 13.7 147 55-201 4-160 (208)
262 2v70_A SLIT-2, SLIT homolog 2 99.8 4.9E-21 1.7E-25 183.5 11.6 152 55-212 8-170 (220)
263 3m19_A Variable lymphocyte rec 99.8 1.1E-20 3.9E-25 184.9 13.8 130 70-199 35-165 (251)
264 2o6q_A Variable lymphocyte rec 99.8 7.1E-20 2.4E-24 181.3 14.8 130 70-199 37-167 (270)
265 2xot_A Amphoterin-induced prot 99.8 2.4E-20 8.2E-25 192.8 10.1 157 56-212 16-206 (361)
266 1zth_A RIO1 serine protein kin 99.8 1.4E-19 4.8E-24 177.8 9.5 136 313-464 49-219 (258)
267 1w8a_A SLIT protein; signaling 99.8 1.6E-19 5.5E-24 169.1 7.7 128 55-182 5-142 (192)
268 3rgz_A Protein brassinosteroid 99.8 2.5E-19 8.7E-24 203.6 9.4 141 73-214 611-751 (768)
269 1p9a_G Platelet glycoprotein I 99.8 1.9E-18 6.5E-23 172.8 12.4 139 70-211 55-211 (290)
270 3m19_A Variable lymphocyte rec 99.8 3.2E-18 1.1E-22 167.4 12.8 136 69-210 58-194 (251)
271 3rfs_A Internalin B, repeat mo 99.8 3.8E-18 1.3E-22 169.0 13.5 131 69-199 84-215 (272)
272 1ogq_A PGIP-2, polygalacturona 99.8 4.6E-19 1.6E-23 179.4 6.7 138 71-211 175-312 (313)
273 2o6r_A Variable lymphocyte rec 99.7 3E-18 1E-22 158.2 10.6 129 55-183 4-141 (177)
274 3e6j_A Variable lymphocyte rec 99.7 9.5E-18 3.2E-22 161.6 13.1 132 60-199 14-145 (229)
275 3rfs_A Internalin B, repeat mo 99.7 8.4E-18 2.9E-22 166.6 13.0 129 69-199 62-191 (272)
276 2v9t_B SLIT homolog 2 protein 99.7 4.9E-18 1.7E-22 162.6 10.8 125 73-200 14-139 (220)
277 4g8a_A TOLL-like receptor 4; l 99.7 4.7E-18 1.6E-22 188.9 11.7 138 62-199 35-183 (635)
278 1w8a_A SLIT protein; signaling 99.7 6.3E-18 2.1E-22 158.2 10.5 131 73-212 11-143 (192)
279 2wfh_A SLIT homolog 2 protein 99.7 1E-17 3.6E-22 156.7 11.8 129 74-212 14-143 (193)
280 1p9a_G Platelet glycoprotein I 99.7 1.5E-17 5.2E-22 166.2 13.7 140 67-207 74-213 (290)
281 1ozn_A Reticulon 4 receptor; N 99.7 8E-18 2.7E-22 167.9 11.4 130 70-199 56-187 (285)
282 2o6q_A Variable lymphocyte rec 99.7 2.5E-17 8.5E-22 162.9 13.2 130 70-199 61-191 (270)
283 2v70_A SLIT-2, SLIT homolog 2 99.7 1.5E-17 5.1E-22 159.2 9.7 124 73-199 14-139 (220)
284 2wfh_A SLIT homolog 2 protein 99.7 2.5E-17 8.5E-22 154.2 10.4 126 55-181 7-141 (193)
285 2ell_A Acidic leucine-rich nuc 99.7 1.5E-17 5.1E-22 152.0 8.3 129 70-200 24-158 (168)
286 1ozn_A Reticulon 4 receptor; N 99.7 1.9E-17 6.4E-22 165.2 8.9 130 70-199 80-211 (285)
287 2z62_A TOLL-like receptor 4, v 99.7 2.9E-17 9.9E-22 163.0 10.0 123 70-192 52-176 (276)
288 2je0_A Acidic leucine-rich nuc 99.7 1.4E-17 4.7E-22 149.0 6.4 126 70-197 17-148 (149)
289 3v47_A TOLL-like receptor 5B a 99.7 2.1E-17 7.2E-22 176.2 8.8 144 57-200 7-165 (455)
290 3v47_A TOLL-like receptor 5B a 99.7 4.3E-17 1.5E-21 173.9 10.6 137 70-212 275-412 (455)
291 2z62_A TOLL-like receptor 4, v 99.7 6.5E-17 2.2E-21 160.5 11.1 130 70-199 28-159 (276)
292 2z66_A Variable lymphocyte rec 99.7 2.2E-17 7.4E-22 166.5 7.6 129 70-199 78-209 (306)
293 3zyi_A Leucine-rich repeat-con 99.7 5.4E-17 1.8E-21 173.0 10.9 140 60-199 56-206 (452)
294 3vq2_A TLR4, TOLL-like recepto 99.7 6.1E-17 2.1E-21 179.2 11.5 145 55-199 4-163 (606)
295 4gyi_A RIO2 kinase; protein ki 99.7 4E-17 1.4E-21 166.6 8.9 141 312-465 96-266 (397)
296 2id5_A Lingo-1, leucine rich r 99.7 7.2E-17 2.5E-21 173.2 10.2 141 59-199 12-162 (477)
297 2z80_A TOLL-like receptor 2, v 99.7 5.8E-17 2E-21 166.9 9.0 143 55-199 27-184 (353)
298 2z81_A CD282 antigen, TOLL-lik 99.7 5.1E-17 1.8E-21 177.6 8.8 142 57-199 3-158 (549)
299 4fcg_A Uncharacterized protein 99.7 5.4E-17 1.9E-21 165.2 8.2 130 70-202 104-242 (328)
300 3zyj_A Leucine-rich repeat-con 99.7 9.5E-17 3.2E-21 170.5 10.4 142 69-212 111-296 (440)
301 2o6r_A Variable lymphocyte rec 99.7 2.9E-16 9.9E-21 144.8 12.1 132 72-212 9-141 (177)
302 3o6n_A APL1; leucine-rich repe 99.7 4.7E-17 1.6E-21 169.9 7.0 130 70-199 45-175 (390)
303 2xwt_C Thyrotropin receptor; s 99.7 8.8E-17 3E-21 155.9 8.4 142 56-199 8-166 (239)
304 2xot_A Amphoterin-induced prot 99.7 4.8E-17 1.7E-21 168.0 6.2 139 69-207 63-207 (361)
305 2z66_A Variable lymphocyte rec 99.7 1.2E-16 4.2E-21 161.0 8.3 131 69-199 100-233 (306)
306 4b8c_D Glucose-repressible alc 99.6 8.3E-17 2.9E-21 180.8 7.6 169 27-200 131-327 (727)
307 3oja_B Anopheles plasmodium-re 99.6 1.2E-16 3.9E-21 176.5 8.2 130 70-199 51-181 (597)
308 2o6s_A Variable lymphocyte rec 99.6 1.1E-15 3.7E-20 144.8 13.5 124 73-199 10-134 (208)
309 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 1.7E-16 6E-21 173.9 9.2 130 68-199 351-483 (562)
310 2z7x_B TOLL-like receptor 1, v 99.6 1E-16 3.5E-21 174.1 7.1 130 68-199 322-454 (520)
311 3t6q_A CD180 antigen; protein- 99.6 2.8E-16 9.7E-21 173.8 10.8 140 60-199 14-163 (606)
312 3vq2_A TLR4, TOLL-like recepto 99.6 1.6E-16 5.6E-21 175.8 7.8 129 71-199 400-531 (606)
313 3zyj_A Leucine-rich repeat-con 99.6 5.4E-16 1.8E-20 164.6 11.1 136 70-207 136-297 (440)
314 1ziw_A TOLL-like receptor 3; i 99.6 4.6E-16 1.6E-20 174.6 11.0 144 56-199 2-155 (680)
315 3oja_A Leucine-rich immune mol 99.6 2.1E-16 7.1E-21 169.8 7.3 30 351-380 323-352 (487)
316 3g39_A Variable lymphocyte rec 99.6 7.2E-16 2.5E-20 141.1 9.7 113 73-188 12-124 (170)
317 3j0a_A TOLL-like receptor 5; m 99.6 6.1E-16 2.1E-20 177.6 11.3 131 71-205 427-563 (844)
318 3zyi_A Leucine-rich repeat-con 99.6 9.3E-16 3.2E-20 163.4 11.2 135 70-212 147-307 (452)
319 3j0a_A TOLL-like receptor 5; m 99.6 5.3E-16 1.8E-20 178.1 9.8 140 58-199 14-158 (844)
320 4g8a_A TOLL-like receptor 4; l 99.6 4.4E-16 1.5E-20 173.0 8.8 137 70-212 445-584 (635)
321 3t6q_A CD180 antigen; protein- 99.6 6.4E-16 2.2E-20 171.0 9.7 130 70-199 376-510 (606)
322 2ft3_A Biglycan; proteoglycan, 99.6 1.3E-15 4.4E-20 155.4 11.0 140 56-199 31-182 (332)
323 2r9u_A Variable lymphocyte rec 99.6 9.6E-16 3.3E-20 140.7 9.0 114 73-189 15-128 (174)
324 1a9n_A U2A', U2A'; complex (nu 99.6 4.3E-16 1.5E-20 143.5 6.3 126 70-200 19-151 (176)
325 1ziw_A TOLL-like receptor 3; i 99.6 1.8E-15 6E-20 169.9 12.4 142 72-213 456-627 (680)
326 1xku_A Decorin; proteoglycan, 99.6 1E-15 3.5E-20 156.0 9.5 141 56-199 29-181 (330)
327 4ezg_A Putative uncharacterize 99.6 6.3E-16 2.1E-20 145.2 7.1 124 71-199 67-191 (197)
328 4eco_A Uncharacterized protein 99.6 5.8E-16 2E-20 172.0 6.2 130 69-199 205-363 (636)
329 1dce_A Protein (RAB geranylger 99.6 1.9E-15 6.4E-20 164.7 9.5 120 71-195 442-566 (567)
330 2z63_A TOLL-like receptor 4, v 99.6 3.1E-15 1.1E-19 164.1 10.7 130 70-199 28-159 (570)
331 4ezg_A Putative uncharacterize 99.6 1.1E-15 3.7E-20 143.5 6.0 125 70-199 44-169 (197)
332 2z63_A TOLL-like receptor 4, v 99.6 1.9E-15 6.6E-20 165.8 8.9 129 70-199 373-504 (570)
333 4glp_A Monocyte differentiatio 99.6 2.6E-15 8.7E-20 151.6 8.4 128 69-199 144-282 (310)
334 1wwl_A Monocyte differentiatio 99.6 1.2E-15 4E-20 154.3 5.6 129 70-199 121-263 (312)
335 3o53_A Protein LRIM1, AGAP0063 99.6 2.2E-15 7.4E-20 152.7 7.3 125 70-199 99-224 (317)
336 2id5_A Lingo-1, leucine rich r 99.6 2.4E-15 8.1E-20 161.4 8.0 132 68-199 54-186 (477)
337 3oja_A Leucine-rich immune mol 99.6 9.7E-16 3.3E-20 164.5 5.0 123 72-199 101-224 (487)
338 3g39_A Variable lymphocyte rec 99.6 8.1E-15 2.8E-19 134.0 10.2 109 95-212 10-119 (170)
339 3o6n_A APL1; leucine-rich repe 99.6 8.5E-15 2.9E-19 152.8 11.7 128 70-199 69-196 (390)
340 3oja_B Anopheles plasmodium-re 99.6 7.2E-15 2.5E-19 162.1 11.6 128 70-199 75-202 (597)
341 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 4.3E-15 1.5E-19 162.8 9.4 135 69-212 376-514 (562)
342 2xwt_C Thyrotropin receptor; s 99.6 3.7E-15 1.3E-19 144.4 7.3 130 69-200 54-190 (239)
343 4ecn_A Leucine-rich repeat pro 99.5 2.3E-15 7.8E-20 170.9 6.3 130 69-200 447-606 (876)
344 2z80_A TOLL-like receptor 2, v 99.5 3.1E-15 1.1E-19 153.9 6.4 131 68-199 74-208 (353)
345 2z7x_B TOLL-like receptor 1, v 99.5 3.7E-15 1.3E-19 161.7 7.1 135 69-212 347-485 (520)
346 1wwl_A Monocyte differentiatio 99.5 8E-16 2.7E-20 155.5 1.6 128 71-199 96-238 (312)
347 2r9u_A Variable lymphocyte rec 99.5 1.7E-14 5.8E-19 132.4 10.3 107 97-212 15-122 (174)
348 2ifg_A High affinity nerve gro 99.5 7.8E-15 2.7E-19 150.5 8.8 112 57-182 7-119 (347)
349 2ft3_A Biglycan; proteoglycan, 99.5 1.3E-14 4.6E-19 147.8 10.2 124 72-199 125-251 (332)
350 1xku_A Decorin; proteoglycan, 99.5 2.5E-14 8.6E-19 145.6 11.9 129 71-199 122-273 (330)
351 3o53_A Protein LRIM1, AGAP0063 99.5 3.4E-15 1.2E-19 151.2 5.0 127 70-199 120-247 (317)
352 1h6t_A Internalin B; cell adhe 99.5 1.4E-14 4.7E-19 144.8 9.4 121 70-199 68-188 (291)
353 2z81_A CD282 antigen, TOLL-lik 99.5 1.3E-14 4.3E-19 158.5 9.5 133 70-212 361-514 (549)
354 4glp_A Monocyte differentiatio 99.5 8.3E-15 2.8E-19 147.8 7.2 128 68-200 167-305 (310)
355 2ell_A Acidic leucine-rich nuc 99.5 9.2E-15 3.1E-19 133.4 6.1 113 70-184 49-165 (168)
356 1xeu_A Internalin C; cellular 99.5 2.4E-14 8.3E-19 140.7 9.5 121 70-200 63-183 (263)
357 3cvr_A Invasion plasmid antige 99.5 8.7E-15 3E-19 158.8 6.8 132 47-199 33-170 (571)
358 1h6u_A Internalin H; cell adhe 99.5 3.4E-14 1.2E-18 143.2 9.6 121 70-199 63-183 (308)
359 1h6u_A Internalin H; cell adhe 99.5 3.7E-14 1.2E-18 142.9 9.6 123 68-199 83-205 (308)
360 4b8c_D Glucose-repressible alc 99.5 1.9E-14 6.5E-19 161.7 7.9 113 68-184 222-334 (727)
361 1h6t_A Internalin B; cell adhe 99.5 4.2E-14 1.5E-18 141.2 9.2 124 68-200 88-211 (291)
362 1xeu_A Internalin C; cellular 99.5 6.2E-14 2.1E-18 137.8 9.1 120 70-199 41-160 (263)
363 1m9s_A Internalin B; cell inva 99.5 7.4E-14 2.5E-18 153.1 10.0 121 70-199 65-185 (605)
364 2je0_A Acidic leucine-rich nuc 99.5 2.3E-14 7.8E-19 127.9 4.9 106 92-199 15-123 (149)
365 1ds9_A Outer arm dynein; leuci 99.5 4.4E-16 1.5E-20 146.4 -6.8 124 71-199 19-150 (198)
366 4fmz_A Internalin; leucine ric 99.5 4.1E-14 1.4E-18 145.0 7.3 122 71-199 222-343 (347)
367 4ay9_X Follicle-stimulating ho 99.4 8.4E-14 2.9E-18 143.0 8.2 144 56-199 7-164 (350)
368 1m9s_A Internalin B; cell inva 99.4 1E-13 3.6E-18 151.9 9.1 123 69-200 86-208 (605)
369 1a9n_A U2A', U2A'; complex (nu 99.4 5.8E-14 2E-18 129.1 3.9 108 70-181 42-155 (176)
370 2ifg_A High affinity nerve gro 99.4 3.2E-13 1.1E-17 138.4 8.3 108 97-212 11-120 (347)
371 1o6v_A Internalin A; bacterial 99.4 3.7E-13 1.3E-17 143.8 8.9 121 70-199 243-363 (466)
372 1dce_A Protein (RAB geranylger 99.4 4.4E-14 1.5E-18 153.9 1.5 116 74-200 427-544 (567)
373 1ds9_A Outer arm dynein; leuci 99.4 3.1E-15 1E-19 140.6 -7.1 121 70-195 48-180 (198)
374 3cvr_A Invasion plasmid antige 99.4 5.5E-13 1.9E-17 144.7 9.6 112 69-199 99-217 (571)
375 1o6v_A Internalin A; bacterial 99.4 6.1E-13 2.1E-17 142.1 8.6 122 69-199 220-341 (466)
376 3bz5_A Internalin-J, INLJ; leu 99.4 1.3E-12 4.4E-17 138.9 10.8 117 70-199 42-158 (457)
377 3tm0_A Aminoglycoside 3'-phosp 99.3 3.3E-12 1.1E-16 125.3 10.2 148 305-462 8-212 (263)
378 3g06_A SSPH2 (leucine-rich rep 99.3 4.4E-13 1.5E-17 147.2 4.2 135 46-199 11-151 (622)
379 4fmz_A Internalin; leucine ric 99.3 2.9E-12 1E-16 131.1 9.4 122 70-199 66-187 (347)
380 3bz5_A Internalin-J, INLJ; leu 99.3 5.4E-12 1.8E-16 134.1 10.4 117 70-199 64-180 (457)
381 2ast_B S-phase kinase-associat 99.3 4.8E-14 1.6E-18 143.8 -6.0 108 71-179 71-182 (336)
382 1jl5_A Outer protein YOPM; leu 99.3 1.3E-11 4.4E-16 131.1 11.4 115 70-199 111-225 (454)
383 3g06_A SSPH2 (leucine-rich rep 99.3 9.5E-12 3.3E-16 136.6 10.4 54 142-199 241-294 (622)
384 2ca6_A RAN GTPase-activating p 99.2 2.1E-13 7.1E-18 142.0 -5.0 130 70-199 122-284 (386)
385 2ast_B S-phase kinase-associat 99.2 2.8E-13 9.6E-18 138.1 -4.3 133 70-202 93-235 (336)
386 1jl5_A Outer protein YOPM; leu 99.2 3.1E-11 1E-15 128.2 11.0 115 70-199 91-205 (454)
387 3goz_A Leucine-rich repeat-con 99.2 5.4E-13 1.8E-17 137.6 -2.9 130 70-199 22-177 (362)
388 2ca6_A RAN GTPase-activating p 99.2 4.2E-13 1.4E-17 139.7 -4.7 130 70-199 94-254 (386)
389 3goz_A Leucine-rich repeat-con 99.2 2.3E-12 7.9E-17 132.9 -1.2 126 74-199 2-148 (362)
390 1nd4_A Aminoglycoside 3'-phosp 99.1 4.1E-11 1.4E-15 117.1 7.3 137 312-463 21-214 (264)
391 4ay9_X Follicle-stimulating ho 99.1 8.1E-11 2.8E-15 120.6 8.6 130 69-199 53-212 (350)
392 3dxp_A Putative acyl-COA dehyd 99.1 3.6E-10 1.2E-14 116.2 11.5 141 316-463 43-248 (359)
393 1z7x_W Ribonuclease inhibitor; 99.0 3.4E-12 1.2E-16 136.0 -8.3 130 70-199 227-380 (461)
394 3rw6_A Nuclear RNA export fact 99.0 1.3E-11 4.4E-16 120.0 -3.8 124 57-183 77-237 (267)
395 3sg8_A APH(2'')-ID; antibiotic 99.0 3.5E-10 1.2E-14 113.4 5.7 185 316-515 25-287 (304)
396 1z7x_W Ribonuclease inhibitor; 98.9 1.7E-11 5.7E-16 130.6 -6.8 129 71-199 86-237 (461)
397 3sb4_A Hypothetical leucine ri 98.9 1.8E-09 6.3E-14 109.4 6.5 59 141-200 225-285 (329)
398 3un9_A NLR family member X1; l 98.8 4.5E-11 1.5E-15 123.2 -7.0 130 70-199 101-249 (372)
399 3un9_A NLR family member X1; l 98.7 5.8E-10 2E-14 114.9 -3.5 111 71-181 127-254 (372)
400 3rw6_A Nuclear RNA export fact 98.7 2.1E-09 7.2E-14 104.4 0.0 80 91-172 167-257 (267)
401 3r70_A Aminoglycoside phosphot 98.7 1.1E-07 3.7E-12 95.9 12.1 136 312-463 38-237 (320)
402 3sb4_A Hypothetical leucine ri 98.7 2.2E-08 7.6E-13 101.4 6.8 100 93-194 225-326 (329)
403 3d1u_A Putative fructosamine-3 98.6 3.8E-07 1.3E-11 90.2 12.3 76 316-395 20-98 (288)
404 3ogk_B Coronatine-insensitive 98.5 9.7E-09 3.3E-13 112.8 -0.1 104 71-175 139-252 (592)
405 1io0_A Tropomodulin; LRR prote 98.5 3.9E-09 1.3E-13 97.4 -3.7 111 69-179 35-164 (185)
406 3tdw_A Gentamicin resistance p 98.4 9.6E-07 3.3E-11 88.3 11.1 136 316-463 24-224 (306)
407 3ogk_B Coronatine-insensitive 98.4 4.5E-08 1.5E-12 107.4 -0.1 129 70-199 164-303 (592)
408 1io0_A Tropomodulin; LRR prote 98.4 7.2E-09 2.5E-13 95.6 -5.5 116 84-199 26-161 (185)
409 4gkh_A Aminoglycoside 3'-phosp 98.4 9.7E-07 3.3E-11 86.5 9.4 136 317-463 30-223 (272)
410 3ovc_A Hygromycin-B 4-O-kinase 98.3 1.5E-06 5.2E-11 88.9 10.3 142 316-463 46-243 (362)
411 3ats_A Putative uncharacterize 98.3 9.2E-07 3.1E-11 90.4 8.1 80 317-396 26-122 (357)
412 2p1m_B Transport inhibitor res 98.2 3E-08 1E-12 108.9 -5.4 63 116-179 430-494 (594)
413 2p1m_B Transport inhibitor res 98.2 3.1E-08 1.1E-12 108.7 -5.7 83 71-153 106-195 (594)
414 4fdw_A Leucine rich hypothetic 98.2 1.9E-06 6.6E-11 89.4 7.8 126 70-200 203-334 (401)
415 4fdw_A Leucine rich hypothetic 98.2 3.2E-06 1.1E-10 87.7 9.0 123 71-199 158-281 (401)
416 2ra8_A Uncharacterized protein 98.1 2.8E-07 9.6E-12 94.1 -1.2 128 69-199 171-317 (362)
417 2ra8_A Uncharacterized protein 98.1 3.7E-07 1.3E-11 93.2 -1.1 127 70-199 139-289 (362)
418 2q83_A YTAA protein; 2635576, 98.0 1.2E-05 4.2E-10 81.3 10.0 141 317-462 38-251 (346)
419 2olc_A MTR kinase, methylthior 97.9 2.2E-05 7.6E-10 81.4 9.6 75 316-392 35-120 (397)
420 3jr1_A Putative fructosamine-3 97.9 4E-05 1.4E-09 76.3 10.3 139 316-459 41-232 (312)
421 3f7w_A Putative fructosamine-3 97.8 0.00014 4.7E-09 71.7 11.5 76 316-395 20-98 (288)
422 3e4g_A ATP synthase subunit S, 97.7 5.8E-06 2E-10 74.4 -0.1 82 95-176 62-149 (176)
423 3e4g_A ATP synthase subunit S, 97.6 9.6E-06 3.3E-10 73.0 0.1 86 70-155 61-153 (176)
424 2pyw_A Uncharacterized protein 97.6 0.00018 6.1E-09 75.1 9.5 78 433-512 232-313 (420)
425 2ppq_A HSK, HK, homoserine kin 97.5 0.00031 1.1E-08 70.2 10.1 158 302-462 8-216 (322)
426 3dxq_A Choline/ethanolamine ki 97.4 0.00066 2.3E-08 67.2 10.5 72 316-395 23-96 (301)
427 4h09_A Hypothetical leucine ri 97.3 0.00095 3.3E-08 68.4 10.5 127 71-201 218-345 (379)
428 3rfe_A Platelet glycoprotein I 97.2 0.00039 1.3E-08 59.4 6.0 56 74-131 12-68 (130)
429 1zyl_A Hypothetical protein YI 97.2 0.0036 1.2E-07 62.6 14.1 157 303-463 13-223 (328)
430 1nw1_A Choline kinase (49.2 KD 97.2 0.00051 1.8E-08 71.7 7.9 73 317-395 79-160 (429)
431 1pgv_A TMD-1, tropomodulin TMD 97.2 1.6E-05 5.3E-10 73.0 -3.6 83 70-152 41-136 (197)
432 4fs7_A Uncharacterized protein 97.2 0.001 3.4E-08 68.7 9.2 125 70-200 71-196 (394)
433 3csv_A Aminoglycoside phosphot 97.1 0.0017 5.8E-08 65.2 10.6 142 317-463 24-217 (333)
434 4gt6_A Cell surface protein; l 97.1 0.00076 2.6E-08 69.6 7.4 116 82-201 253-369 (394)
435 4gt6_A Cell surface protein; l 97.1 0.00047 1.6E-08 71.2 5.6 124 70-199 265-388 (394)
436 3feg_A Choline/ethanolamine ki 97.0 0.0017 5.8E-08 66.3 9.5 142 317-463 56-254 (379)
437 3rfe_A Platelet glycoprotein I 97.0 0.00089 3E-08 57.2 6.2 57 97-155 11-68 (130)
438 4fs7_A Uncharacterized protein 97.0 0.0015 5.1E-08 67.3 8.3 85 113-200 292-377 (394)
439 3i1a_A Spectinomycin phosphotr 96.9 0.0039 1.3E-07 62.8 10.7 67 321-394 33-108 (339)
440 2qg7_A Ethanolamine kinase PV0 96.9 0.0033 1.1E-07 66.0 10.1 74 317-395 114-189 (458)
441 4h09_A Hypothetical leucine ri 96.9 0.0014 4.9E-08 67.0 7.3 108 70-181 240-347 (379)
442 2yle_A Protein spire homolog 1 96.8 0.0033 1.1E-07 57.9 8.3 102 393-514 34-135 (229)
443 3c5i_A Choline kinase; choline 96.7 0.0026 8.9E-08 64.9 8.0 73 317-394 39-121 (369)
444 1pgv_A TMD-1, tropomodulin TMD 96.5 0.00034 1.2E-08 64.0 -0.7 89 89-177 36-137 (197)
445 3f2s_A CK, chetk-alpha, cholin 96.0 0.011 3.7E-07 60.7 7.6 143 317-463 58-280 (401)
446 3mes_A Choline kinase; malaria 94.9 0.13 4.4E-06 53.1 10.8 74 317-395 76-158 (424)
447 2k1k_A Ephrin type-A receptor 92.1 0.18 6.2E-06 32.1 3.8 29 238-266 7-35 (38)
448 3g15_A CK, chetk-alpha, cholin 91.1 0.19 6.5E-06 51.6 5.1 30 434-463 245-280 (401)
449 2l2t_A Receptor tyrosine-prote 90.0 0.38 1.3E-05 31.6 3.8 27 244-270 12-38 (44)
450 2ks1_B Epidermal growth factor 89.6 0.48 1.6E-05 31.2 4.2 27 244-270 13-39 (44)
451 4ann_A ESSB; membrane protein, 83.5 1.5 5.3E-05 40.1 5.7 117 365-517 43-159 (215)
452 2jwa_A Receptor tyrosine-prote 82.5 1.5 5.1E-05 28.7 3.6 7 244-250 14-20 (44)
453 4ano_A ESSB; membrane protein, 81.4 2.4 8.4E-05 38.9 6.1 116 365-517 48-164 (219)
454 3cxl_A N-chimerin; SH2, RHO-GA 75.1 0.35 1.2E-05 50.6 -1.8 60 315-377 146-214 (463)
455 2l8s_A Integrin alpha-1; trans 63.0 10 0.00035 25.9 4.1 32 240-271 8-39 (54)
456 2knc_A Integrin alpha-IIB; tra 62.1 8.6 0.00029 26.4 3.6 33 240-272 11-43 (54)
457 2lz0_A Uncharacterized protein 53.7 24 0.00082 27.7 5.6 46 81-127 7-52 (100)
458 3ls8_A Phosphatidylinositol 3- 52.0 1E+02 0.0035 32.8 11.7 85 370-462 402-501 (614)
459 2lz0_A Uncharacterized protein 50.9 30 0.001 27.1 5.8 47 105-152 7-53 (100)
460 2k1a_A Integrin alpha-IIB; sin 47.6 25 0.00086 22.7 3.8 31 240-270 9-39 (42)
461 2klu_A T-cell surface glycopro 46.9 26 0.0009 24.9 4.1 15 268-282 35-49 (70)
462 1cja_A Protein (actin-fragmin 40.9 92 0.0032 30.4 8.5 139 316-463 74-237 (342)
463 2l34_A TYRO protein tyrosine k 27.4 60 0.002 19.7 3.0 19 241-259 6-24 (33)
464 3ox7_P MH027; urokinase-type p 22.9 27 0.00092 18.3 0.7 9 56-64 6-14 (23)
465 2fq3_A Transcription regulator 22.1 88 0.003 24.7 3.9 46 539-584 33-78 (104)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4e-55 Score=438.73 Aligned_cols=259 Identities=25% Similarity=0.431 Sum_probs=214.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC------CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND------CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
++|.+.+.||+|+||+||+|.+.+ +..||||+++.......+.|.+|++++++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 467778999999999999998752 45699999987665566789999999999999999999999999999999
Q ss_pred EEEecCCCCccccccccC---------CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEE
Q 007455 385 IYDYLSMGSLDDFLHEHG---------EGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHV 455 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 455 (603)
||||+++|+|.++++..+ .....+++.+++.++.||++||+|||++ +|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 999999999999997643 2234599999999999999999999998 8999999999999999999999
Q ss_pred eecccccccCCCCcce-eecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHH
Q 007455 456 SDFGLAKLLVDEEAHV-TTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTL 533 (603)
Q Consensus 456 ~DfG~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 533 (603)
+|||+|+......... .....||+.|||||++.+..++.++|||||||++|||+| |+.||..... .+.....
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~~~i 243 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN------NEVIECI 243 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHH
Confidence 9999998765443322 234569999999999999999999999999999999999 8999975321 1111111
Q ss_pred hhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 534 LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.. ......+...+.++.+|+.+||+.||++|||++|+.+.|+++.
T Consensus 244 ~~---------~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 244 TQ---------GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HH---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred Hc---------CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 11 1112234456678999999999999999999999999998865
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.8e-54 Score=440.05 Aligned_cols=261 Identities=26% Similarity=0.428 Sum_probs=209.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC------CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND------CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
++|.+.++||+|+||+||+|.+.+ +..||||+++.......+.|.+|+++|++++|||||+++|+|.+++..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 456677899999999999998753 45699999987665566789999999999999999999999999999999
Q ss_pred EEEecCCCCccccccccCCC-----------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCe
Q 007455 385 IYDYLSMGSLDDFLHEHGEG-----------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEP 453 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 453 (603)
||||+++|+|.++++..... ...++|.+++.++.|+++||+|||++ +||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 99999999999999865421 23589999999999999999999998 89999999999999999999
Q ss_pred EEeecccccccCCCCc-ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHH
Q 007455 454 HVSDFGLAKLLVDEEA-HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMN 531 (603)
Q Consensus 454 kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 531 (603)
||+|||+++.....+. .......||+.|||||++.+..++.++|||||||++|||+| |+.||..... .....
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~~ 271 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN------TEAID 271 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH------HHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH------HHHHH
Confidence 9999999987654332 23345679999999999999999999999999999999999 8999875321 11111
Q ss_pred HHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 532 TLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
.+... .....+...+.++.+|+.+||+.||++||||+||++.|+.+...
T Consensus 272 ~i~~g---------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 272 CITQG---------RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHT---------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHcC---------CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 11111 11223345567899999999999999999999999999987643
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.4e-54 Score=431.85 Aligned_cols=258 Identities=21% Similarity=0.357 Sum_probs=210.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC------CCCEEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN------DCGTFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRLPATKL 383 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 383 (603)
.++++.+.||+|+||+||+|.+. ++..||||+++.... ...+.|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34566789999999999999874 345699999965433 34567999999999999999999999999999999
Q ss_pred EEEEecCCCCccccccccCCC------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC
Q 007455 384 LIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 451 (603)
+||||+++|+|.+++...... ...+++.+++.++.|||+||+|||++ +||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence 999999999999999654321 23589999999999999999999998 899999999999999999
Q ss_pred CeEEeecccccccCCCCc-ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHH
Q 007455 452 EPHVSDFGLAKLLVDEEA-HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGW 529 (603)
Q Consensus 452 ~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 529 (603)
++||+|||+++.....+. .......||++|||||++.++.++.++|||||||++|||+| |+.||..... ...
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~------~~~ 256 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------QDV 256 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH------HHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH------HHH
Confidence 999999999987644332 22345679999999999999999999999999999999999 8999865321 111
Q ss_pred HHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 007455 530 MNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQE 586 (603)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~ 586 (603)
...+.. ......+...+.++.+|+.+||+.||++||||+||++.|+..
T Consensus 257 ~~~i~~---------~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 257 VEMIRN---------RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHT---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHc---------CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 111111 111223445667899999999999999999999999999864
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-53 Score=424.51 Aligned_cols=259 Identities=27% Similarity=0.412 Sum_probs=203.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
.+++++.+.||+|+||+||+|.+++ .||||+++..... ..+.|.+|++++++++|||||++++++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3577888999999999999998764 6999998754333 33579999999999999999999998864 57899999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCC
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE 467 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~ 467 (603)
|+++|+|.+++.... ..+++.++..++.||++||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 112 y~~gGsL~~~l~~~~---~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 112 WCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred cCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 999999999997543 2389999999999999999999998 8999999999999999999999999999876543
Q ss_pred C-cceeecccccccccCcccccc---CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 468 E-AHVTTVVAGTFGYLAPEYLQS---GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 468 ~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
. ........||+.|||||++.+ +.|+.++|||||||++|||+||+.||..... ............ .
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~------~~~~~~~~~~~~----~ 255 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN------RDQIIFMVGRGY----A 255 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHHHTTC----C
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh------HHHHHHHHhcCC----C
Confidence 2 223445679999999999864 4589999999999999999999999964321 111111111111 1
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.+.....+...+.++.+|+.+||+.||++||||+||++.|+.+.
T Consensus 256 ~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 256 SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp CCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred CCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 11222233455678999999999999999999999999987654
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.5e-53 Score=430.61 Aligned_cols=251 Identities=25% Similarity=0.395 Sum_probs=204.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
+++|++.+.||+|+||+||+|++.. ++.||||++...... ..+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 4689999999999999999999874 567999999754333 3457899999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||++||+|.+++...+. ..+++.+++.++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+....
T Consensus 103 Ey~~gg~L~~~i~~~~~--~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKG--VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp ECCTTCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred eCCCCCcHHHHHHHcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 99999999999976432 3378999999999999999999999 899999999999999999999999999987643
Q ss_pred CCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhccc
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKR 546 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (603)
.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.... .......+.. ..
T Consensus 178 ~~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~---------~~ 241 (350)
T 4b9d_A 178 TV-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKIIS---------GS 241 (350)
T ss_dssp HH-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHH---------TC
T ss_pred Cc-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHc---------CC
Confidence 21 22345679999999999999999999999999999999999999997532 1122222221 11
Q ss_pred CCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 547 CADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.+..+...+.++.+|+.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 242 FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22233345678999999999999999999999985
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8.9e-53 Score=426.93 Aligned_cols=249 Identities=23% Similarity=0.341 Sum_probs=209.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEec
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYL 389 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 389 (603)
+.|+..+.||+|+||+||+|.+.. +..||||++........+.+.+|+++|++++|||||++++++.+++..|+||||+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 457888999999999999999875 5679999997665555667899999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCc
Q 007455 390 SMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA 469 (603)
Q Consensus 390 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~ 469 (603)
+||+|.+++... .+++.++..++.||+.||+|||++ +|+||||||+|||++.+|++||+|||+|+.+.....
T Consensus 154 ~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 154 EGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp TTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 999999998753 289999999999999999999999 899999999999999999999999999987754332
Q ss_pred ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCC
Q 007455 470 HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549 (603)
Q Consensus 470 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (603)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ........... ... ..
T Consensus 226 -~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~~~i~~~~------~~~-~~ 291 (346)
T 4fih_A 226 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAMKMIRDNL------PPR-LK 291 (346)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSS------CCC-CS
T ss_pred -cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHHcCC------CCC-CC
Confidence 34457899999999999999999999999999999999999999975321 11111111110 001 11
Q ss_pred cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 550 ~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.....+.++.+|+.+||+.||++|||++|+++
T Consensus 292 ~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 292 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22345678999999999999999999999986
No 7
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.9e-53 Score=421.91 Aligned_cols=247 Identities=23% Similarity=0.341 Sum_probs=208.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCC---CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
++|++.+.||+|+||+||+|++.. ++.||||++.+. .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 578999999999999999999875 557999999643 2334567899999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||++||+|.+++...+. +++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~~~----l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999987644 89999999999999999999999 899999999999999999999999999998754
Q ss_pred CC-cceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 467 EE-AHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 467 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.. .......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+...
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~~~i~~~--------- 249 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE------GLIFAKIIKL--------- 249 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHT---------
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcC---------
Confidence 33 2334567899999999999999999999999999999999999999975321 1111111111
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVL 580 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl 580 (603)
....+...+.++.+|+.+||+.||++|||++|++
T Consensus 250 -~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 250 -EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -CCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -CCCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1122334567899999999999999999999864
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.8e-52 Score=420.36 Aligned_cols=252 Identities=23% Similarity=0.279 Sum_probs=205.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
.+.|+..++||+|+||.||+|++.. +..||||+++.... ..+|+.++++++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 3567778899999999999999875 56799999965432 24799999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC-CeEEeecccccccCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLVDE 467 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfG~~~~~~~~ 467 (603)
++||+|.++++..+. +++..+..++.||+.||+|||++ +||||||||+|||++.+| ++||+|||+|+.+...
T Consensus 132 ~~gg~L~~~l~~~~~----l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 132 LEGGSLGQLIKQMGC----LPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred cCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 999999999987544 99999999999999999999999 899999999999999988 6999999999887543
Q ss_pred Ccc----eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 468 EAH----VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 468 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||....... +. ..+.....
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~~---~~i~~~~~----- 273 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP---LC---LKIASEPP----- 273 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC---CH---HHHHHSCC-----
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---HH---HHHHcCCC-----
Confidence 322 1234579999999999999999999999999999999999999997643221 11 11111110
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQE 586 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~ 586 (603)
.....+...+.++.+++.+||+.||++|||++|+++.|...
T Consensus 274 --~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 274 --PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp --GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 01112334567899999999999999999999999887654
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.5e-52 Score=408.01 Aligned_cols=246 Identities=22% Similarity=0.364 Sum_probs=192.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC---CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR---EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||+||+|.+. .++.||||++.+.. ....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 578999999999999999999986 45679999996542 23346789999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+ +|+|.+++...+. +++.++..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+|+...
T Consensus 92 mEy~-~g~L~~~l~~~~~----l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EECC-CEEHHHHHHHSCS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred EeCC-CCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 9999 5799999987543 99999999999999999999999 89999999999999999999999999998764
Q ss_pred CCCcceeecccccccccCccccccCCC-CcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRA-TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
+.. ......||+.|||||++.+..+ +.++||||+||++|||+||+.||.... ..........
T Consensus 164 ~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~------~~~~~~~i~~--------- 226 (275)
T 3hyh_A 164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISN--------- 226 (275)
T ss_dssp -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH---------
T ss_pred CCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHc---------
Confidence 432 2345679999999999988776 579999999999999999999997532 1111111111
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.....+...+.++.+|+.+||+.||++|||++|+++
T Consensus 227 -~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 227 -GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111223345577999999999999999999999987
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.6e-51 Score=427.91 Aligned_cols=249 Identities=23% Similarity=0.342 Sum_probs=209.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEec
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYL 389 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 389 (603)
+.|+..+.||+|+||.||+|.+.. +..||||++........+.+.+|+.+|++++|||||++++++.+++..|+||||+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 568889999999999999999875 5679999997666666677999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCc
Q 007455 390 SMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA 469 (603)
Q Consensus 390 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~ 469 (603)
+||+|.++++... +++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+.....
T Consensus 231 ~gG~L~~~i~~~~-----l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 231 EGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp TTEEHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred CCCcHHHHHhccC-----CCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 9999999987532 89999999999999999999999 899999999999999999999999999987754332
Q ss_pred ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCC
Q 007455 470 HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549 (603)
Q Consensus 470 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (603)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+.... .... .
T Consensus 303 -~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~~~i~~~~------~~~~-~ 368 (423)
T 4fie_A 303 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAMKMIRDNL------PPRL-K 368 (423)
T ss_dssp -CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSC------CCCC-S
T ss_pred -cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHHcCC------CCCC-c
Confidence 34456899999999999999999999999999999999999999965321 11111111110 0111 1
Q ss_pred cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 550 ~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.....+.++.+|+.+||..||++|||++|+++
T Consensus 369 ~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 369 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22344568999999999999999999999986
No 11
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6.2e-52 Score=424.68 Aligned_cols=272 Identities=27% Similarity=0.415 Sum_probs=216.8
Q ss_pred CCChHHHHHHhhCCCCCCeeeecCCeEEEEEEECCC------CEEEEEEeCCCCCC-hHHHHHHHHHHHhhCCC-Ceeee
Q 007455 300 PYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDC------GTFAVKRIDRSREG-SDQVFERELEILGSIKH-INLVN 371 (603)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~------~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h-~niv~ 371 (603)
++...++....++|++.+.||+|+||+||+|.+.+. +.||||++...... ..+.|.+|+++|.+++| ||||+
T Consensus 53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 333333333457899999999999999999997643 35999999765433 34569999999999965 89999
Q ss_pred cceeeecC-CccEEEEEecCCCCccccccccCC------------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEe
Q 007455 372 LRGYCRLP-ATKLLIYDYLSMGSLDDFLHEHGE------------GQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHR 438 (603)
Q Consensus 372 l~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 438 (603)
++|+|.++ +..++||||+++|+|.++++.... ....+++.++..++.|||+||+|||++ +||||
T Consensus 133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHR 209 (353)
T 4ase_A 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 209 (353)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecC
Confidence 99998764 568999999999999999976432 124489999999999999999999999 89999
Q ss_pred cCCCCCeEECCCCCeEEeecccccccCCCCc-ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCC
Q 007455 439 DIKSSNILLDENLEPHVSDFGLAKLLVDEEA-HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTD 516 (603)
Q Consensus 439 Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~ 516 (603)
||||+|||+++++.+||+|||+|+....... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||.
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999987654433 33445679999999999999999999999999999999998 899996
Q ss_pred cccccCCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhccc
Q 007455 517 PTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588 (603)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 588 (603)
..... ..+...+..+ .....+...+.++.+++.+||+.||++|||++|+++.|+++..
T Consensus 290 ~~~~~------~~~~~~i~~g--------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 290 GVKID------EEFCRRLKEG--------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp TCCCS------HHHHHHHHHT--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCHH------HHHHHHHHcC--------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 53211 1111111111 1112233456789999999999999999999999999987653
No 12
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-51 Score=409.06 Aligned_cols=246 Identities=26% Similarity=0.409 Sum_probs=195.5
Q ss_pred CCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCC--ChHHHHHHHHHHHhhCCCCeeeecceeeec----CCccEEEE
Q 007455 314 DEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSRE--GSDQVFERELEILGSIKHINLVNLRGYCRL----PATKLLIY 386 (603)
Q Consensus 314 ~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 386 (603)
.+.++||+|+||+||+|.+.. +..||+|++..... ...+.|.+|++++++++|||||++++++.. +...|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 445689999999999999875 45799999965432 234568999999999999999999999865 34579999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC-CCCeEEeecccccccC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE-NLEPHVSDFGLAKLLV 465 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~~~~~~ 465 (603)
||+++|+|.+++...+. +++..+..++.||+.||+|||+++ ++|+||||||+|||++. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~~~----l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKV----MKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999987543 899999999999999999999981 23999999999999984 7999999999998643
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.. .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||.... .......... ......
T Consensus 184 ~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~-----~~~~~~~~i~-~~~~~~---- 249 (290)
T 3fpq_A 184 AS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVT-SGVKPA---- 249 (290)
T ss_dssp TT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHT-TTCCCG----
T ss_pred CC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----cHHHHHHHHH-cCCCCC----
Confidence 32 2345689999999999875 69999999999999999999999996421 1111111111 111100
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..+...+.++.+|+.+||+.||++|||++|+++
T Consensus 250 ---~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 250 ---SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111223457899999999999999999999986
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.6e-51 Score=412.69 Aligned_cols=267 Identities=25% Similarity=0.320 Sum_probs=201.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCC----ccEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPA----TKLLIY 386 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 386 (603)
++|.+.+.||+|+||+||+|.++ ++.||||++.... .....++.|+..+.+++|||||++++++.+++ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 35667789999999999999985 5789999996432 22223455666677899999999999997654 479999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEecCCCCCeEECCCCCeEEeecccc
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD-----CCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~ 461 (603)
||+++|+|.++++... +++..+.+++.|+++||+|||++ ..++|+||||||+|||++.++++||+|||++
T Consensus 81 Ey~~~gsL~~~l~~~~-----l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp ECCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCCCcHHHHHHhCC-----CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 9999999999998643 89999999999999999999986 2458999999999999999999999999999
Q ss_pred cccCCCCcc---eeecccccccccCccccccC------CCCcccchHhHHHHHHHHHhCCCCCCcccccCC--------c
Q 007455 462 KLLVDEEAH---VTTVVAGTFGYLAPEYLQSG------RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRG--------L 524 (603)
Q Consensus 462 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~--------~ 524 (603)
+........ ......||+.|||||++.+. .++.++|||||||++|||+||+.|+........ .
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 876544322 12345799999999998754 467799999999999999999887754321100 0
Q ss_pred cHhHHHHHHhhhCcchhhhcccCCC--cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhccc
Q 007455 525 NVVGWMNTLLKENRLEDVIDKRCAD--ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588 (603)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 588 (603)
............... ++..+. ...+.+..+.+|+.+||+.||++||||+||++.|+++..
T Consensus 236 ~~~~~~~~~~~~~~~----rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 236 PSVEEMRKVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCHHHHHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhcccC----CCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 111112222211111 112221 123556789999999999999999999999999988653
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.2e-51 Score=412.48 Aligned_cols=247 Identities=27% Similarity=0.315 Sum_probs=197.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC----CCCEEEEEEeCCCCC--ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN----DCGTFAVKRIDRSRE--GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
++|++.+.||+|+||+||+|++. .++.||||+++.... .....+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57899999999999999999873 245799999965321 223358899999999999999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||++||+|.+++.+.+. +++.++..++.|++.||+|||++ +|+||||||+|||++.+|++||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~~~----l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVM----FTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999987554 89999999999999999999999 8999999999999999999999999999865
Q ss_pred CCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
..... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .........
T Consensus 177 ~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~i~~--------- 240 (304)
T 3ubd_A 177 IDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR------KETMTMILK--------- 240 (304)
T ss_dssp ----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH---------
T ss_pred cCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH------HHHHHHHHc---------
Confidence 44322 23456799999999999999999999999999999999999999975321 111111111
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRPSM-----NQVLQ 581 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~-----~evl~ 581 (603)
.....+...+.++.+|+.+||+.||++|||+ +|+++
T Consensus 241 -~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 241 -AKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred -CCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1112233456789999999999999999984 67764
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.2e-49 Score=399.76 Aligned_cols=251 Identities=23% Similarity=0.361 Sum_probs=189.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC-hHHHHHHHHHHHhhCCCCeeeecceeeecCC-------
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG-SDQVFERELEILGSIKHINLVNLRGYCRLPA------- 380 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 380 (603)
..+|++.+.||+|+||+||+|.+. ++..||||+++..... ..+.+.+|++++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 356888999999999999999987 4567999999654332 3457899999999999999999999986544
Q ss_pred -----ccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEE
Q 007455 381 -----TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHV 455 (603)
Q Consensus 381 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 455 (603)
..|+||||+++|+|.+++..... ....++..++.++.||++||+|||++ +|+||||||+|||++.++.+||
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence 36899999999999999986543 22356777899999999999999999 8999999999999999999999
Q ss_pred eecccccccCCCCcc-----------eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCc
Q 007455 456 SDFGLAKLLVDEEAH-----------VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGL 524 (603)
Q Consensus 456 ~DfG~~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~ 524 (603)
+|||+|+........ .....+||+.|||||++.+..|+.++||||+||++|||++ ||.....
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---- 232 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---- 232 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH----
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH----
Confidence 999999877543221 1234579999999999999999999999999999999996 7653210
Q ss_pred cHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 525 NVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
....... ......+......+....+|+.+||+.||++|||+.|+++
T Consensus 233 -~~~~~~~---------~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 -RVRTLTD---------VRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -HHHHHHH---------HHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHHH---------HhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000010 1111111112233456788999999999999999999987
No 16
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.7e-47 Score=386.78 Aligned_cols=299 Identities=41% Similarity=0.757 Sum_probs=250.0
Q ss_pred CCChHHHHHHhhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCC-hHHHHHHHHHHHhhCCCCeeeecceeeec
Q 007455 300 PYPSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREG-SDQVFERELEILGSIKHINLVNLRGYCRL 378 (603)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 378 (603)
.++..++....++|+..+.||+|+||.||+|.+.++..||||++...... ....+.+|+++++.++||||+++++++..
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 98 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 98 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECC
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEec
Confidence 36777888889999999999999999999999888888999998654322 23368999999999999999999999999
Q ss_pred CCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeec
Q 007455 379 PATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDF 458 (603)
Q Consensus 379 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 458 (603)
++..++||||+++|+|.+++.........+++..+..++.|++.||+|||+++.++|+||||||+||+++.++.+||+||
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Df 178 (326)
T 3uim_A 99 PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 178 (326)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCC
T ss_pred CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccC
Confidence 99999999999999999999887666667999999999999999999999986668999999999999999999999999
Q ss_pred ccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccc--cCCccHhHHHHHHhhh
Q 007455 459 GLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFV--KRGLNVVGWMNTLLKE 536 (603)
Q Consensus 459 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~ 536 (603)
|+++..............||+.|+|||++.+..++.++||||+|+++|||++|+.||+.... ........|.......
T Consensus 179 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 258 (326)
T 3uim_A 179 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258 (326)
T ss_dssp SSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSS
T ss_pred ccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhc
Confidence 99988765555555566799999999999888899999999999999999999999974322 2234455666555555
Q ss_pred CcchhhhcccCC-CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCCCCcccccc
Q 007455 537 NRLEDVIDKRCA-DADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSDFYES 598 (603)
Q Consensus 537 ~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~~~~~ 598 (603)
.......+.... ......+..+.+++.+||+.+|++|||++|+++.|++.......++|...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 321 (326)
T 3uim_A 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKE 321 (326)
T ss_dssp CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSCC-----
T ss_pred hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhhhhhhHH
Confidence 555555444433 35677888999999999999999999999999999998888777776543
No 17
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.2e-46 Score=381.41 Aligned_cols=283 Identities=38% Similarity=0.659 Sum_probs=241.4
Q ss_pred ChHHHHHHhhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCc
Q 007455 302 PSCEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPAT 381 (603)
Q Consensus 302 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 381 (603)
+..++...+++|+..+.||+|+||.||+|.+.++..||||++........+.+.+|+++++.++||||+++++++...+.
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 33344556789999999999999999999988888999999877666667789999999999999999999999999999
Q ss_pred cEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccc
Q 007455 382 KLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461 (603)
Q Consensus 382 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~ 461 (603)
.++||||+++|+|.+++.........+++..++.++.|+++||+|||++ +++||||||+||+++.++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccc
Confidence 9999999999999999987654445689999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCC-cceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcch
Q 007455 462 KLLVDEE-AHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLE 540 (603)
Q Consensus 462 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (603)
+...... ........||+.|+|||++.+..++.++||||||+++|||++|+.||.............|.........+.
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCC
T ss_pred cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHH
Confidence 8654322 222334568999999999988899999999999999999999999998766555566667766655555555
Q ss_pred hhhcccCCC-cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 541 DVIDKRCAD-ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 541 ~~~~~~~~~-~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
..+++.... .....+..+.+++.+||+.||++|||++|+++.|+...
T Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp SSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 555544332 45678889999999999999999999999999998765
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-47 Score=393.83 Aligned_cols=260 Identities=24% Similarity=0.331 Sum_probs=198.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeec------CCc
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRL------PAT 381 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 381 (603)
++|++.+.||+|+||+||+|.+.. ++.||||+++..... ..+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 468889999999999999999874 567999999755433 23568899999999999999999998754 357
Q ss_pred cEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccc
Q 007455 382 KLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461 (603)
Q Consensus 382 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~ 461 (603)
.|+||||++ |+|.+++...+. +++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~----l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQP----LTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSC----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 899999996 589999876543 99999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCC---cceeecccccccccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhC
Q 007455 462 KLLVDEE---AHVTTVVAGTFGYLAPEYLQSG-RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537 (603)
Q Consensus 462 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 537 (603)
+.+.... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.... .....+.......
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~---~~l~~I~~~~g~p 282 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV---HQLQLIMMVLGTP 282 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH---HHHHHHHHHHCCC
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH---HHHHHHHHhcCCC
Confidence 8764322 2233457899999999998765 4689999999999999999999999754211 1110000000000
Q ss_pred -----------cchhhhccc--CCCcC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 538 -----------RLEDVIDKR--CADAD-----METVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 538 -----------~~~~~~~~~--~~~~~-----~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.....+... ....+ ...+.++.+|+.+||..||++|||++|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000000000 00000 123467899999999999999999999986
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5e-46 Score=383.43 Aligned_cols=196 Identities=28% Similarity=0.383 Sum_probs=168.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC----CCCEEEEEEeCCCCCChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN----DCGTFAVKRIDRSREGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 384 (603)
.+.|++.+.||+|+||+||+|+++ .+..||+|++.... ...++.+|+++++.+ +||||+++++++.+.++.|+
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l 97 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI 97 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence 367999999999999999999864 23469999986543 345688999999998 69999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCC-CCeEEeecccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDEN-LEPHVSDFGLAKL 463 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG~~~~ 463 (603)
||||+++|+|.++++. +++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 98 vmE~~~g~~L~~~~~~-------l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 98 AMPYLEHESFLDILNS-------LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEECCCCCCHHHHHTT-------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeCCCcccHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 9999999999999852 88999999999999999999999 89999999999999876 7999999999986
Q ss_pred cCCCCc---------------------------ceeecccccccccCccccccC-CCCcccchHhHHHHHHHHHhCCCCC
Q 007455 464 LVDEEA---------------------------HVTTVVAGTFGYLAPEYLQSG-RATEKSDVYSFGVLLLELVTGKRPT 515 (603)
Q Consensus 464 ~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~p~ 515 (603)
..+... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 543221 112345799999999998765 5899999999999999999999999
Q ss_pred Cc
Q 007455 516 DP 517 (603)
Q Consensus 516 ~~ 517 (603)
..
T Consensus 248 ~~ 249 (361)
T 4f9c_A 248 YK 249 (361)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.7e-46 Score=402.51 Aligned_cols=249 Identities=24% Similarity=0.340 Sum_probs=202.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCC---CChHHHHH---HHHHHHhhCCCCeeeecceeeecCCcc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSR---EGSDQVFE---RELEILGSIKHINLVNLRGYCRLPATK 382 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~ 382 (603)
+++|++.++||+|+||.||+|++.. +..||||++.+.. ......+. +++.+++.++|||||+++++|.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 5779999999999999999999875 4569999995421 12222333 346677788999999999999999999
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
|+||||++||+|.+++...+. +++..+..++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~----l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGV----FSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 999999999999999987654 89999999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCCcceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchh
Q 007455 463 LLVDEEAHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541 (603)
Q Consensus 463 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (603)
.+.... ....+||+.|||||++.. ..|+.++|+||+||++|||++|+.||....... .........
T Consensus 341 ~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~---~~~i~~~i~------- 407 (689)
T 3v5w_A 341 DFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTL------- 407 (689)
T ss_dssp ECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC---HHHHHHHHH-------
T ss_pred ecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHhhc-------
Confidence 765432 345689999999999964 579999999999999999999999997543221 111111111
Q ss_pred hhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 007455 542 VIDKRCADADMETVEAILEIAARCTDANPDDRPS-----MNQVLQ 581 (603)
Q Consensus 542 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~evl~ 581 (603)
......+...+.++.+|+.+||+.||++|++ ++|+++
T Consensus 408 ---~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 408 ---TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ---HCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ---CCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1111233345678999999999999999998 788874
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.7e-45 Score=402.10 Aligned_cols=252 Identities=23% Similarity=0.360 Sum_probs=208.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
+++|++.+.||+|+||.||+|.++. +..||+|.+........+.+.+|+.+|+.++|||||++++++.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 4689999999999999999999875 557999999766555567789999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCC--CCeEEeecccccccCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDEN--LEPHVSDFGLAKLLVD 466 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DfG~~~~~~~ 466 (603)
++||+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+++.+..
T Consensus 236 ~~gg~L~~~i~~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 236 MSGGELFEKVADEH---NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCBHHHHHTCTT---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred cCCCcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 99999999886532 2389999999999999999999999 89999999999999854 8999999999998754
Q ss_pred CCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhccc
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKR 546 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (603)
.. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ........... .. +.
T Consensus 310 ~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~------~~~~~~i~~~~-~~--~~-- 376 (573)
T 3uto_A 310 KQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND------DETLRNVKSCD-WN--MD-- 376 (573)
T ss_dssp TS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTC-CC--CC--
T ss_pred CC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHHhCC-CC--CC--
Confidence 43 23456799999999999999999999999999999999999999975421 11111111110 00 00
Q ss_pred CCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 547 CADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.......+.++.+|+.+||+.||++|||++|+++
T Consensus 377 -~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 377 -DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp -SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -cccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0111234567899999999999999999999986
No 22
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.1e-43 Score=356.38 Aligned_cols=250 Identities=22% Similarity=0.367 Sum_probs=209.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
.++|++.+.||+|+||+||+|.+. .+..||||++........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 468999999999999999999975 4567999999766666677899999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++|+|.+++.... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 99 LAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CTTCBHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHhhcC-----CCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 99999999997642 88999999999999999999999 89999999999999999999999999998765433
Q ss_pred cceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCC
Q 007455 469 AHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548 (603)
Q Consensus 469 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (603)
. ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ............ ...
T Consensus 171 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~-------~~~ 236 (297)
T 3fxz_A 171 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP------LRALYLIATNGT-------PEL 236 (297)
T ss_dssp C-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHHCS-------CCC
T ss_pred c-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCC-------CCC
Confidence 2 23445799999999999999999999999999999999999999965321 111111111110 001
Q ss_pred CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 549 DADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 237 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 122344567999999999999999999999986
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=360.16 Aligned_cols=259 Identities=28% Similarity=0.473 Sum_probs=210.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
.++|.+.+.||+|+||.||+|.+.. +..||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 3578888999999999999999874 567999998766555667899999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++|+|.+++..... .+++.+++.++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 89 IKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp CTTCBHHHHHHHCCT---TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999986432 389999999999999999999999 89999999999999999999999999998764432
Q ss_pred cce-------------eecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhh
Q 007455 469 AHV-------------TTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLK 535 (603)
Q Consensus 469 ~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 535 (603)
... .....||+.|+|||++.+..++.++||||||+++|||++|..|+.............
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~------- 235 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN------- 235 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC-------
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh-------
Confidence 211 114569999999999999999999999999999999999999986543221110000
Q ss_pred hCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 536 ENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.....+.. .+...+..+.+++.+||+.||++|||++|+++.|++..
T Consensus 236 ---~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 236 ---VRGFLDRY---CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp ---HHHHHHHT---CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---hhcccccc---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00111111 11223356899999999999999999999999988754
No 24
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.8e-44 Score=366.76 Aligned_cols=249 Identities=23% Similarity=0.361 Sum_probs=197.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
.++|++.+.||+|+||+||+|.+. .+..||||++..... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 468889999999999999999986 456799999865432 223468899999999999999999999999999999999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCC
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE 467 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~ 467 (603)
|+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 89 ~~~gg~L~~~l~~~~~----l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 89 YCPGGELFDYIISQDR----LSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp CCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred CCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 9999999999976543 89999999999999999999999 8999999999999999999999999999876544
Q ss_pred CcceeecccccccccCccccccCCC-CcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhccc
Q 007455 468 EAHVTTVVAGTFGYLAPEYLQSGRA-TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKR 546 (603)
Q Consensus 468 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (603)
.........||+.|+|||++.+..+ +.++||||+|+++|||++|..||.... .......... .
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~----------~ 225 (347)
T 3zgw_A 162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN------VMALYKKIMR----------G 225 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH----------T
T ss_pred CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHc----------C
Confidence 4434455679999999999987775 889999999999999999999997532 1111111111 1
Q ss_pred CCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 547 CADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
....+...+.++.+++.+||+.||++|||++|+++
T Consensus 226 ~~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 226 KYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 11222334567899999999999999999999996
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.7e-43 Score=359.05 Aligned_cols=261 Identities=32% Similarity=0.473 Sum_probs=203.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCCh--HHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGS--DQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
..+|++.+.||+|+||+||+|.+. +..||||++....... .+.+.+|++++++++||||+++++++......++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 467888999999999999999874 5789999987554332 3568899999999999999999999999999999999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK--IIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|+++|+|.+++..... ...+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++...
T Consensus 115 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp CCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred cCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 9999999999986432 23488999999999999999999998 7 9999999999999999999999999997643
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ........ ..
T Consensus 191 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~------~~~~~~~~--------~~ 255 (309)
T 3p86_A 191 STF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA------QVVAAVGF--------KC 255 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHH--------SC
T ss_pred ccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHh--------cC
Confidence 322 2234456999999999999999999999999999999999999999753211 11111100 11
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCC
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 590 (603)
.....+...+.++.+++.+||+.+|++|||++|+++.|+......
T Consensus 256 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 256 KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 111223345567999999999999999999999999999866443
No 26
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.9e-43 Score=349.71 Aligned_cols=256 Identities=27% Similarity=0.407 Sum_probs=213.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEec
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYL 389 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 389 (603)
.++|++.+.||+|+||.||+|.+.++..||+|++..... ..+.+.+|++++++++||||+++++++......++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 357888999999999999999999888899999975443 3466899999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCc
Q 007455 390 SMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA 469 (603)
Q Consensus 390 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~ 469 (603)
++++|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||++........
T Consensus 86 ~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 86 SNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp TTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred CCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999999997643 2389999999999999999999999 899999999999999999999999999987765544
Q ss_pred ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCC
Q 007455 470 HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548 (603)
Q Consensus 470 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (603)
.......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||..... .......... ...
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~---------~~~ 224 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN------SEVVLKVSQG---------HRL 224 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHTT---------CCC
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh------HHHHHHHHcC---------CCC
Confidence 44444556778999999998889999999999999999999 9999865321 1111111111 111
Q ss_pred CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 549 DADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
..+...+..+.+++.+||+.+|++|||++|+++.|++..
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 225 YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 122234567999999999999999999999999998865
No 27
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.4e-43 Score=362.25 Aligned_cols=247 Identities=26% Similarity=0.370 Sum_probs=206.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
..+|++.+.||+|+||.||+|.+. .+..||||++...... ..+.+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 467889999999999999999985 5667999999654322 3456889999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||+++|+|.+++...+. +++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 e~~~~~~L~~~l~~~~~----l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGR----MKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999976543 89999999999999999999999 899999999999999999999999999987654
Q ss_pred CCcceeecccccccccCccccccCCCC-cccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQSGRAT-EKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.. ......||+.|+|||++.+..++ .++||||+||++|||++|+.||..... .........
T Consensus 167 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i~~---------- 228 (328)
T 3fe3_A 167 GG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------KELRERVLR---------- 228 (328)
T ss_dssp SC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH----------
T ss_pred CC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHh----------
Confidence 32 23456799999999999887765 789999999999999999999975321 111111111
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.....+...+.++.+++.+||..||.+|||++|+++
T Consensus 229 ~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 229 GKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp CCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111222334567999999999999999999999986
No 28
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.3e-42 Score=347.18 Aligned_cols=280 Identities=38% Similarity=0.602 Sum_probs=229.9
Q ss_pred CCChHHHHHHhhCCCCC------CeeeecCCeEEEEEEECCCCEEEEEEeCCCC----CChHHHHHHHHHHHhhCCCCee
Q 007455 300 PYPSCEIIEKLEALDEE------DVVGSGGFGTVYRMVMNDCGTFAVKRIDRSR----EGSDQVFERELEILGSIKHINL 369 (603)
Q Consensus 300 ~~~~~~~~~~~~~~~~~------~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~ni 369 (603)
.+...++...+++|+.. +.||+|+||.||+|.+. +..||||++.... ....+.+.+|+.++++++||||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 92 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESS-SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEEC-CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence 36677888888888877 89999999999999874 5789999986532 2335678999999999999999
Q ss_pred eecceeeecCCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC
Q 007455 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE 449 (603)
Q Consensus 370 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 449 (603)
+++++++...+..++||||+++|+|.+++..... ...+++..++.++.|++.||.|||++ +++||||||+||+++.
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred EEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999875432 23489999999999999999999998 8999999999999999
Q ss_pred CCCeEEeecccccccCCCCcc-eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhH
Q 007455 450 NLEPHVSDFGLAKLLVDEEAH-VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVG 528 (603)
Q Consensus 450 ~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~ 528 (603)
++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|||++|..||...... .....
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~ 245 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLD 245 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS--SBTTH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch--HHHHH
Confidence 999999999999876543222 2334568999999998875 5789999999999999999999999764322 12222
Q ss_pred HHHHHhh-hCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 529 WMNTLLK-ENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 529 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
+...... ...+...++......+...+..+.+++.+||+.+|.+|||++++++.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 3222222 2234455566666667788899999999999999999999999999998753
No 29
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.5e-43 Score=352.07 Aligned_cols=255 Identities=28% Similarity=0.445 Sum_probs=212.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEecC
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLS 390 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 390 (603)
++|++.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 57888899999999999999998888899999975543 34679999999999999999999999999999999999999
Q ss_pred CCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCcc
Q 007455 391 MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAH 470 (603)
Q Consensus 391 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~~ 470 (603)
+|+|.+++.... ..+++..++.++.|+++||+|||++ +++||||||+||+++.++.+||+|||+++........
T Consensus 89 ~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 89 HGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp TCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCcHHHHHHhcC---cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 999999997543 2389999999999999999999999 8999999999999999999999999999876543333
Q ss_pred eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCC
Q 007455 471 VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549 (603)
Q Consensus 471 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (603)
......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||..... .......... ....
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~------~~~~~~~~~~---------~~~~ 227 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVEDISTG---------FRLY 227 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTT---------CCCC
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH------HHHHHHHhcC---------ccCC
Confidence 3334557788999999998899999999999999999999 9999865321 1111111111 1111
Q ss_pred cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 550 ~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.+...+..+.+++.+||+.+|++|||++|+++.|+++.
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 228 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 22334567999999999999999999999999998754
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.3e-43 Score=360.72 Aligned_cols=261 Identities=27% Similarity=0.414 Sum_probs=209.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC----CCEEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND----CGTFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
++|++.+.||+|+||.||+|.+.. +..||||+++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 567888999999999999999863 33599999975433 2345689999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++|+|.+++.... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eeCCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 99999999999997542 2389999999999999999999999 89999999999999999999999999998765
Q ss_pred CCCcc--eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 466 DEEAH--VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 466 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
..... ......+|+.|+|||++.+..++.++||||||+++|||++ |..||..... .........
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~------~~~~~~~~~------- 269 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN------RDVISSVEE------- 269 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH------HHHHHHHHT-------
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHHc-------
Confidence 43222 2223446778999999998899999999999999999999 9999865321 111111111
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCCCC
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCP 592 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 592 (603)
......+...+..+.+++.+||..||++|||++|+++.|+.+...++.
T Consensus 270 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 270 --GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp --TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred --CCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 111122334567899999999999999999999999999987755443
No 31
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.4e-43 Score=353.50 Aligned_cols=262 Identities=25% Similarity=0.397 Sum_probs=206.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC---hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
++|++.+.||+|+||.||+|.+. .+..||+|.+...... ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 56888999999999999999986 4567999998544332 2356889999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||+++|+|.+++...+. +++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 91 e~~~g~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHGP----LSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp ECCCSCBHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred eCCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 99999999999987543 89999999999999999999999 899999999999999999999999999987755
Q ss_pred CCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhccc
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKR 546 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (603)
..........||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ........... .....
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~-~~~~~--- 233 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA------VSIAIKHIQDS-VPNVT--- 233 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH------HHHHHHHHSSC-CCCHH---
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhhcc-CCCcc---
Confidence 444444556799999999999998999999999999999999999999975321 11111111111 00000
Q ss_pred CCCcCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhhcccCC
Q 007455 547 CADADMETVEAILEIAARCTDANPDDRP-SMNQVLQLLEQEVMSP 590 (603)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~~P~~RP-s~~evl~~L~~~~~~~ 590 (603)
.......+..+.+++.+||+.||++|| +++++.+.|++.....
T Consensus 234 -~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 234 -TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp -HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred -hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 011223456799999999999999998 9999999999865443
No 32
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.1e-43 Score=364.52 Aligned_cols=260 Identities=28% Similarity=0.426 Sum_probs=210.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC--------CCCEEEEEEeCCCCCC-hHHHHHHHHHHHhhC-CCCeeeecceeeecC
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN--------DCGTFAVKRIDRSREG-SDQVFERELEILGSI-KHINLVNLRGYCRLP 379 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 379 (603)
.++|++.+.||+|+||.||+|.+. .+..||||+++..... ..+.+.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 367888999999999999999863 2235999998754332 335689999999999 899999999999999
Q ss_pred CccEEEEEecCCCCccccccccCCC------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE
Q 007455 380 ATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL 447 (603)
Q Consensus 380 ~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 447 (603)
+..|+||||+++|+|.+++...... ...+++..++.++.|+++||+|||++ +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 9999999999999999999865321 23478999999999999999999999 89999999999999
Q ss_pred CCCCCeEEeecccccccCCCCcc-eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCcc
Q 007455 448 DENLEPHVSDFGLAKLLVDEEAH-VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLN 525 (603)
Q Consensus 448 ~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~ 525 (603)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---~ 313 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---E 313 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---G
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH---H
Confidence 99999999999999876543321 2233457789999999998899999999999999999999 99998653211 1
Q ss_pred HhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 526 VVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
....... ......+...+.++.+++.+||+.+|++|||++|+++.|+++.
T Consensus 314 ---~~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 314 ---LFKLLKE---------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp ---HHHHHHT---------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHhc---------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111111 1111223345568999999999999999999999999998854
No 33
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.8e-42 Score=352.05 Aligned_cols=259 Identities=23% Similarity=0.354 Sum_probs=212.2
Q ss_pred CChHHHHHHhhC----------CCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCee
Q 007455 301 YPSCEIIEKLEA----------LDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINL 369 (603)
Q Consensus 301 ~~~~~~~~~~~~----------~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni 369 (603)
++..++..+++. |+..+.||+|+||.||+|.+. +++.||||++........+.+.+|+.++++++||||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni 104 (321)
T 2c30_A 25 VTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104 (321)
T ss_dssp CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTB
T ss_pred CcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCc
Confidence 555566665543 566679999999999999987 567899999977666667779999999999999999
Q ss_pred eecceeeecCCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC
Q 007455 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE 449 (603)
Q Consensus 370 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 449 (603)
+++++++...+..++||||+++|+|.+++... .+++..+..++.|+++||.|||+. +|+||||||+||+++.
T Consensus 105 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTL 176 (321)
T ss_dssp CCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECT
T ss_pred ceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECC
Confidence 99999999999999999999999999998753 289999999999999999999998 8999999999999999
Q ss_pred CCCeEEeecccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHH
Q 007455 450 NLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGW 529 (603)
Q Consensus 450 ~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~ 529 (603)
++.+||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ...
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~------~~~ 249 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP------VQA 249 (321)
T ss_dssp TCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHH
T ss_pred CCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHH
Confidence 99999999999987654322 23445799999999999988999999999999999999999999965321 111
Q ss_pred HHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 530 MNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
........ .+.. ......+.++.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~------~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 250 MKRLRDSP------PPKL-KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHHHHHSS------CCCC-TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHhcCC------CCCc-CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111110 0000 112234567999999999999999999999987
No 34
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.3e-42 Score=356.10 Aligned_cols=248 Identities=21% Similarity=0.282 Sum_probs=205.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCC---CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+.. +..||+|++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 4678889999999999999999874 567999998643 223445688999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERV----FTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 999999999999876543 89999999999999999999999 89999999999999999999999999998643
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .........
T Consensus 157 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~---------- 219 (337)
T 1o6l_A 157 SDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------ERLFELILM---------- 219 (337)
T ss_dssp CTT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH----------
T ss_pred cCC-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH------HHHHHHHHc----------
Confidence 322 223456799999999999998999999999999999999999999965321 111111111
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRP-----SMNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~evl~ 581 (603)
.....+...+.++.+++.+||+.||++|| +++|+++
T Consensus 220 ~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 220 EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11112334556899999999999999999 8999975
No 35
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8e-43 Score=349.46 Aligned_cols=256 Identities=24% Similarity=0.372 Sum_probs=209.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEec
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYL 389 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 389 (603)
.++|++.+.||+|+||.||+|.+.++..||+|++..... ..+.+.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 467888899999999999999999888899999975543 3466899999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCc
Q 007455 390 SMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA 469 (603)
Q Consensus 390 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~ 469 (603)
++|+|.+++.... ..+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 102 ANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp TTCBHHHHHHCGG---GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 9999999997632 2389999999999999999999999 899999999999999999999999999987654333
Q ss_pred ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCC
Q 007455 470 HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548 (603)
Q Consensus 470 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (603)
.......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||..... .......... ...
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~------~~~~~~~~~~---------~~~ 240 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN------SETAEHIAQG---------LRL 240 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHTT---------CCC
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh------hHHHHHHhcc---------cCC
Confidence 33334456788999999998899999999999999999998 9999865321 1111111111 111
Q ss_pred CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 549 DADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
..+...+..+.+++.+||+.+|++|||++|+++.|+++.
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 241 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 122233567999999999999999999999999998754
No 36
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=8e-43 Score=363.28 Aligned_cols=259 Identities=26% Similarity=0.441 Sum_probs=198.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC----CCCEEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN----DCGTFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
..+|++.+.||+|+||.||+|.+. .+..||||.++.... ...+.+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357899999999999999999875 345699999975432 234568999999999999999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++.... ..+++.+++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 124 v~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 999999999999997643 2389999999999999999999998 8999999999999999999999999999876
Q ss_pred CCCCcce--eecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchh
Q 007455 465 VDEEAHV--TTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541 (603)
Q Consensus 465 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (603)
....... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ..........
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~------~~~~~~i~~~----- 266 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN------QDVIKAVDEG----- 266 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH------HHHHHHHHTT-----
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcC-----
Confidence 5432221 122335678999999998999999999999999999998 9999864321 1111111110
Q ss_pred hhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 542 VIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 542 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
.....+...+.++.+++.+||+.+|++||+++|+++.|+++...
T Consensus 267 ----~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 267 ----YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp ----EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 11112334557799999999999999999999999999886543
No 37
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6.8e-43 Score=373.64 Aligned_cols=258 Identities=28% Similarity=0.445 Sum_probs=211.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEec
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYL 389 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 389 (603)
.++|++.+.||+|+||.||+|.++++..||||+++... ...+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 45778889999999999999999988889999997644 34667999999999999999999999986 66789999999
Q ss_pred CCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCc
Q 007455 390 SMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA 469 (603)
Q Consensus 390 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~ 469 (603)
++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 265 ~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 265 AKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp TTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 9999999997542 12378899999999999999999999 899999999999999999999999999987654322
Q ss_pred ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCC
Q 007455 470 HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548 (603)
Q Consensus 470 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (603)
.......+++.|+|||++....++.++||||||+++|||++ |+.||..... ........... ..
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~------~~~~~~i~~~~---------~~ 404 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN------PEVIRALERGY---------RM 404 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHHHHTC---------CC
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCC---------CC
Confidence 22233446788999999998899999999999999999999 9999864321 11111111111 11
Q ss_pred CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 549 DADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
..+...+.++.+++.+||+.||++|||++++++.|++....
T Consensus 405 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 405 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 12334567899999999999999999999999999986543
No 38
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.8e-42 Score=355.16 Aligned_cols=251 Identities=24% Similarity=0.323 Sum_probs=204.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC------hHHHHHHHHHHHhhCCCCeeeecceeeecCCcc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG------SDQVFERELEILGSIKHINLVNLRGYCRLPATK 382 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 382 (603)
.+.|++.+.||+|+||.||+|.+.. +..||+|.+...... ..+.+.+|+.++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 3578889999999999999999874 567999998654322 346789999999999999999999999999999
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC----CeEEeec
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL----EPHVSDF 458 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 458 (603)
++||||+++|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~~----l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCSC----CBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 999999999999999976433 89999999999999999999999 899999999999998877 7999999
Q ss_pred ccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCc
Q 007455 459 GLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR 538 (603)
Q Consensus 459 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 538 (603)
|++....... ......||+.|+|||++.+..++.++||||+|+++|+|++|..||..... ...........
T Consensus 164 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~------~~~~~~i~~~~- 234 (361)
T 2yab_A 164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANITAVS- 234 (361)
T ss_dssp SSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTC-
T ss_pred CCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcC-
Confidence 9998765432 23445699999999999988999999999999999999999999975321 11111111100
Q ss_pred chhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 539 LEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.. ++. ......+.++.+++.+||..||++|||++|+++
T Consensus 235 ~~--~~~---~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 235 YD--FDE---EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CC--CCH---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CC--CCc---hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 000 001123467899999999999999999999985
No 39
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.9e-43 Score=364.22 Aligned_cols=257 Identities=26% Similarity=0.394 Sum_probs=207.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC-hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG-SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
.++|.+.+.||+|+||.||+|.+. ++..||||.++..... ....+.+|++++++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457888899999999999999997 5667999998654322 22458899999999999999999999999999999999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCC
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE 467 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~ 467 (603)
|+++|+|.+++...+ ..+++..++.++.|++.||+|||++ +++||||||+|||++.++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 999999999998643 2388999999999999999999999 8999999999999999999999999999865432
Q ss_pred Cccee-ecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 468 EAHVT-TVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 468 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
..... ....+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .........
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~-------- 331 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------QTREFVEKG-------- 331 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------HHHHHHHTT--------
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcC--------
Confidence 21111 12235678999999998899999999999999999998 99998653211 111111111
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.....+...+.++.+++.+||+.||++|||++++++.|+++.
T Consensus 332 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 011123344567999999999999999999999999998754
No 40
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=6.3e-43 Score=357.10 Aligned_cols=266 Identities=30% Similarity=0.378 Sum_probs=206.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCc----cEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPAT----KLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----~~lv 385 (603)
.++|++.+.||+|+||.||+|.+. ++.||||++.... ......++|+.++++++||||+++++++..... .++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467889999999999999999987 4789999986432 233456779999999999999999999987543 5999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-------CCCCeEEecCCCCCeEECCCCCeEEeec
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD-------CCPKIIHRDIKSSNILLDENLEPHVSDF 458 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------~~~~ivH~Dlkp~NIll~~~~~~kl~Df 458 (603)
|||+++|+|.++++... +++..++.++.|+++||+|||+. ..++|+||||||+|||++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV-----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999997642 89999999999999999999986 1237999999999999999999999999
Q ss_pred ccccccCCCCcc-eeecccccccccCcccccc-----CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccH------
Q 007455 459 GLAKLLVDEEAH-VTTVVAGTFGYLAPEYLQS-----GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNV------ 526 (603)
Q Consensus 459 G~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~------ 526 (603)
|+++........ ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||...........
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 999876543322 2334579999999999876 3456689999999999999999999976432221111
Q ss_pred ----hHHHHHHhhhCcchhhhcccCCC--cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 527 ----VGWMNTLLKENRLEDVIDKRCAD--ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 527 ----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
..+...... .... +.... .....+.++.+++.+||+.||++|||++|+++.|+++.
T Consensus 256 ~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 256 HPSLEDMQEVVVH-KKKR----PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp SCCHHHHHHHHTT-SCCC----CCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhc-ccCC----CCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111111111 1100 11111 12345677999999999999999999999999998754
No 41
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.6e-42 Score=370.44 Aligned_cols=260 Identities=31% Similarity=0.464 Sum_probs=206.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEecC
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLS 390 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 390 (603)
++|++.+.||+|+||.||+|.++++..||||+++... ...+.+.+|++++++++||||+++++++.. +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 5677889999999999999999988889999997644 345679999999999999999999999876 67899999999
Q ss_pred CCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCcc
Q 007455 391 MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAH 470 (603)
Q Consensus 391 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~~ 470 (603)
+|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 262 ~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 336 (452)
T 1fmk_A 262 KGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336 (452)
T ss_dssp TCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence 999999997532 12388999999999999999999999 8999999999999999999999999999876544333
Q ss_pred eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCC
Q 007455 471 VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549 (603)
Q Consensus 471 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (603)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ........... ...
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~------~~~~~~i~~~~---------~~~ 401 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQVERGY---------RMP 401 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHHHTTC---------CCC
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCC---------CCC
Confidence 3334457789999999998899999999999999999999 8999864321 11111111111 111
Q ss_pred cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCCCC
Q 007455 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCP 592 (603)
Q Consensus 550 ~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 592 (603)
.+...+..+.+++.+||+.+|++|||++++++.|++......+
T Consensus 402 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 2334567899999999999999999999999999987644433
No 42
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.6e-42 Score=349.54 Aligned_cols=267 Identities=29% Similarity=0.423 Sum_probs=205.4
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-----CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecC--CccE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-----DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLP--ATKL 383 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 383 (603)
++|++.+.||+|+||+||+|.+. .+..||||++........+.+.+|++++++++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 57888999999999999999842 4557999999766555557799999999999999999999998543 5589
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
+||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 90 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred EEEEeCCCCCHHHHHHhccc---ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 99999999999999986532 389999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCcc--eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccccc-----CCccHhHHHHHHhhh
Q 007455 464 LVDEEAH--VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVK-----RGLNVVGWMNTLLKE 536 (603)
Q Consensus 464 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~ 536 (603)
....... ......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF---- 239 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH----
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH----
Confidence 6543221 223345777899999999899999999999999999999999998653210 00000000000
Q ss_pred CcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 537 NRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
..............+...+.++.+++.+||+.+|++|||++|+++.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 240 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 000001111112233455678999999999999999999999999998754
No 43
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.4e-42 Score=342.80 Aligned_cols=255 Identities=28% Similarity=0.436 Sum_probs=211.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEecC
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLS 390 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 390 (603)
++|++.+.||+|+||.||+|.+.++..||+|.+..... ..+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 57888899999999999999998888899999976543 34678999999999999999999999999999999999999
Q ss_pred CCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCcc
Q 007455 391 MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAH 470 (603)
Q Consensus 391 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~~ 470 (603)
+++|.+++.... ..+++..++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 87 ~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 87 HGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp TCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCcHHHHHhhCc---ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 999999997643 2388999999999999999999999 8999999999999999999999999999876443222
Q ss_pred eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCC
Q 007455 471 VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549 (603)
Q Consensus 471 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (603)
......++..|+|||++.+..++.++||||+|+++|||++ |+.||..... .......... ....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~i~~~---------~~~~ 225 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVEDISTG---------FRLY 225 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTT---------CCCC
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH------HHHHHHHhcC---------CcCC
Confidence 2233457788999999998889999999999999999999 8999865321 1111111111 0111
Q ss_pred cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 550 ~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.+...+..+.+++.+||+.+|++|||++|+++.|+++.
T Consensus 226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 22234567999999999999999999999999998754
No 44
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2e-42 Score=346.28 Aligned_cols=256 Identities=22% Similarity=0.358 Sum_probs=195.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCC----CEEEEEEeCCCCCC-hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDC----GTFAVKRIDRSREG-SDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
.++|++.+.||+|+||.||+|.+..+ ..||+|.+...... ..+.+.+|+.++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 35788899999999999999998642 35899988654322 3456889999999999999999999984 567899
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++.... ..+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++..
T Consensus 93 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccccc
Confidence 999999999999997643 2389999999999999999999999 8999999999999999999999999999877
Q ss_pred CCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
............+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .. .......
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~---~~---~~~i~~~------- 233 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DV---IGRIENG------- 233 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GH---HHHHHTT-------
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH---HH---HHHHHcC-------
Confidence 5544333344557789999999998899999999999999999997 89998753211 11 1111111
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.....+...+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 234 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 234 --ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111223345577999999999999999999999999998754
No 45
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-42 Score=355.27 Aligned_cols=261 Identities=25% Similarity=0.427 Sum_probs=211.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC------CCEEEEEEeCCCCCC-hHHHHHHHHHHHhhCCCCeeeecceeeecCCcc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND------CGTFAVKRIDRSREG-SDQVFERELEILGSIKHINLVNLRGYCRLPATK 382 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 382 (603)
.++|++.+.||+|+||.||+|.+.+ +..||||.++..... ..+.+.+|+.++++++||||+++++++...+..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 4688899999999999999999863 256999998754332 345689999999999999999999999999999
Q ss_pred EEEEEecCCCCccccccccCCC--------------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCC
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEG--------------------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKS 442 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 442 (603)
++||||+++|+|.+++...... ...+++.+++.++.|+++||.|||++ +|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCc
Confidence 9999999999999999864321 14589999999999999999999999 899999999
Q ss_pred CCeEECCCCCeEEeecccccccCCCCc-ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccc
Q 007455 443 SNILLDENLEPHVSDFGLAKLLVDEEA-HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFV 520 (603)
Q Consensus 443 ~NIll~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~ 520 (603)
+||+++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 999999999999999999986643322 12234567889999999998899999999999999999999 9999864321
Q ss_pred cCCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhccc
Q 007455 521 KRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588 (603)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 588 (603)
........ +......+...+.++.+++.+||+.+|++|||++++++.|+++..
T Consensus 283 ------~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 283 ------EEVIYYVR---------DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp ------HHHHHHHH---------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ------HHHHHHHh---------CCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 11111111 111122233455679999999999999999999999999998654
No 46
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-42 Score=354.10 Aligned_cols=246 Identities=24% Similarity=0.397 Sum_probs=203.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCC---CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
..+|.+.+.||+|+||.||+|.+. .+..||+|++... .......+.+|+.+++.++||||+++++++..++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 367888999999999999999985 4567999998542 122335689999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+ +|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~E~~-~g~l~~~l~~~~~----l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKKR----MTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 6799988876543 89999999999999999999999 89999999999999999999999999998765
Q ss_pred CCCcceeecccccccccCccccccCCC-CcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRA-TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
.... .....||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||....... +...+.
T Consensus 160 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~----------------~~~~i~ 221 (336)
T 3h4j_B 160 DGNF--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN----------------LFKKVN 221 (336)
T ss_dssp TSBT--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT----------------CBCCCC
T ss_pred CCcc--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH----------------HHHHHH
Confidence 4332 234569999999999987776 689999999999999999999997543211 111111
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
......+...+.++.+++.+||+.||.+|||++|+++
T Consensus 222 ~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 222 SCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp SSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred cCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1112233345577999999999999999999999986
No 47
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.7e-42 Score=351.55 Aligned_cols=262 Identities=24% Similarity=0.363 Sum_probs=196.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCC----EEEEEEeCCC--CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCcc-
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCG----TFAVKRIDRS--REGSDQVFERELEILGSIKHINLVNLRGYCRLPATK- 382 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~----~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 382 (603)
.++|++.+.||+|+||.||+|.+..++ .||||.+... .....+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 357889999999999999999977544 6999998654 233456789999999999999999999999877665
Q ss_pred -----EEEEEecCCCCccccccccCC--CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEE
Q 007455 383 -----LLIYDYLSMGSLDDFLHEHGE--GQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHV 455 (603)
Q Consensus 383 -----~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 455 (603)
++||||+++|+|.+++..... ....+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 999999999999999875432 222489999999999999999999999 8999999999999999999999
Q ss_pred eecccccccCCCCcc-eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHH
Q 007455 456 SDFGLAKLLVDEEAH-VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTL 533 (603)
Q Consensus 456 ~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 533 (603)
+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||...... . .....
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~---~~~~~ 252 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA---E---IYNYL 252 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---G---HHHHH
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH---H---HHHHH
Confidence 999999876443321 2233456788999999999899999999999999999999 89998753211 1 11111
Q ss_pred hhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 534 LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
.. ......+...+.++.+++.+||+.||++|||+.++++.|++....
T Consensus 253 ~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 253 IG---------GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp HT---------TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hc---------CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11 111222334557899999999999999999999999999986643
No 48
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.5e-42 Score=350.75 Aligned_cols=252 Identities=27% Similarity=0.376 Sum_probs=202.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
.++|++.+.||+|+||.||+|.+. .+..||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 467889999999999999999987 556799999864432 233568899999999999999999999999999999999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCC
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE 467 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~ 467 (603)
|+++|+|.+++..... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 86 ~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSBTTTB----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 9999999999976533 89999999999999999999998 8999999999999999999999999999866433
Q ss_pred Cc-ceeecccccccccCccccccCCC-CcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 468 EA-HVTTVVAGTFGYLAPEYLQSGRA-TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 468 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.. .......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||....... .....| .....
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~----~~~~~------- 226 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDW----KEKKT------- 226 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-HHHHHH----HTTCT-------
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHH----hcccc-------
Confidence 22 22334679999999999987665 778999999999999999999997532110 111111 11000
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
........+..+.+++.+||+.||++|||++|+++
T Consensus 227 -~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 227 -YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp -TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00111234567889999999999999999999986
No 49
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-42 Score=359.15 Aligned_cols=260 Identities=29% Similarity=0.413 Sum_probs=211.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC--------CCEEEEEEeCCCCCC-hHHHHHHHHHHHhhC-CCCeeeecceeeecC
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND--------CGTFAVKRIDRSREG-SDQVFERELEILGSI-KHINLVNLRGYCRLP 379 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 379 (603)
.++|.+.+.||+|+||.||+|.+.. +..||||++...... ..+.+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 3578888999999999999998632 235999999755332 235688999999999 899999999999999
Q ss_pred CccEEEEEecCCCCccccccccCCC------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE
Q 007455 380 ATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL 447 (603)
Q Consensus 380 ~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 447 (603)
+..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 9999999999999999999875421 23489999999999999999999999 89999999999999
Q ss_pred CCCCCeEEeecccccccCCCCc-ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCcc
Q 007455 448 DENLEPHVSDFGLAKLLVDEEA-HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLN 525 (603)
Q Consensus 448 ~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~ 525 (603)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~------ 298 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------ 298 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------
Confidence 9999999999999987654332 22334557889999999999999999999999999999999 999986432
Q ss_pred HhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 526 VVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
........... .....+...+.++.+++.+||+.+|++|||++|+++.|+++.
T Consensus 299 ~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 299 VEELFKLLKEG---------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp HHHHHHHHHTT---------CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC---------CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111111111 111122344567999999999999999999999999998865
No 50
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.3e-42 Score=371.95 Aligned_cols=259 Identities=29% Similarity=0.441 Sum_probs=213.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
.++|++.+.||+|+||.||+|.+.+ +..||||.++.... ..+.+.+|+.++++++||||+++++++......++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 3567888999999999999999986 55799999875443 456799999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 298 ~~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 298 MTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp CTTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred cCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 999999999986432 3488999999999999999999999 89999999999999999999999999998765443
Q ss_pred cceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccC
Q 007455 469 AHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547 (603)
Q Consensus 469 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (603)
........+++.|+|||++.+..++.++||||||+++|||++ |..||...... .+. ....... .
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~~~---~~~~~~~---------~ 437 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVY---ELLEKDY---------R 437 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHH---HHHHTTC---------C
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---HHH---HHHHcCC---------C
Confidence 333334456789999999998899999999999999999999 88998653211 111 1111110 1
Q ss_pred CCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 548 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
...+...+.++.+|+.+||+.+|++|||++++++.|+++...
T Consensus 438 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 112334557899999999999999999999999999987543
No 51
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1e-41 Score=344.39 Aligned_cols=259 Identities=26% Similarity=0.391 Sum_probs=200.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhh--CCCCeeeecceeeec----CCccE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGS--IKHINLVNLRGYCRL----PATKL 383 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~~ 383 (603)
.++|++.+.||+|+||.||+|.+. +..||||++... ....+.+|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEEC-CEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 357889999999999999999984 578999998543 34456667777666 799999999998654 34578
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEecCCCCCeEECCCCCeEE
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH--------HDCCPKIIHRDIKSSNILLDENLEPHV 455 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~kl 455 (603)
+||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||
T Consensus 83 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEE
T ss_pred EehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEE
Confidence 999999999999999643 3899999999999999999999 66 8999999999999999999999
Q ss_pred eecccccccCCCCcce---eecccccccccCccccccC------CCCcccchHhHHHHHHHHHhC----------CCCCC
Q 007455 456 SDFGLAKLLVDEEAHV---TTVVAGTFGYLAPEYLQSG------RATEKSDVYSFGVLLLELVTG----------KRPTD 516 (603)
Q Consensus 456 ~DfG~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~vl~elltg----------~~p~~ 516 (603)
+|||+++......... .....||+.|+|||++.+. .++.++||||||+++|||++| +.||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 9999998765443322 2234799999999999876 455799999999999999999 77775
Q ss_pred cccccCCccHhHHHHHHhhhCcchhhhcccCCC--cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 007455 517 PTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD--ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQE 586 (603)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~ 586 (603)
....... ... ............ ...+. .....+.++.+++.+||+.||++|||++|+++.|+++
T Consensus 235 ~~~~~~~-~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 235 DVVPNDP-SFE-DMRKVVCVDQQR----PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTSCSSC-CHH-HHHHHHTTSCCC----CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCc-chh-hhhHHHhccCCC----CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 4322111 111 111111111111 11111 1235678899999999999999999999999999874
No 52
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=358.71 Aligned_cols=249 Identities=24% Similarity=0.319 Sum_probs=200.8
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCC---CCChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccE
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRS---REGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKL 383 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 383 (603)
..++|++.+.||+|+||.||+|.+.. +..||||++... .....+.+.+|..+++.+ +||||+++++++...+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 35789999999999999999999875 567999998643 223345678999999988 6999999999999999999
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
+||||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 101 lv~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRR----FDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999999987543 89999999999999999999999 899999999999999999999999999985
Q ss_pred cCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 464 LVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 464 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .........
T Consensus 174 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~-------- 238 (353)
T 3txo_A 174 GICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE------DDLFEAILN-------- 238 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH--------
T ss_pred cccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH------HHHHHHHHc--------
Confidence 4322 2234456799999999999988899999999999999999999999975421 111111111
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSM------NQVLQ 581 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~------~evl~ 581 (603)
.....+...+.++.+++.+||+.+|++||++ +|+++
T Consensus 239 --~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 239 --DEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --CCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1112233355679999999999999999998 77764
No 53
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.7e-42 Score=358.57 Aligned_cols=255 Identities=20% Similarity=0.315 Sum_probs=204.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCC-EEEEEEeCCCCCC---hHHHHHHHHHHHhhC-CCCeeeecceeeecCCccEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG---SDQVFERELEILGSI-KHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 384 (603)
.++|++.++||+|+||.||+|.+..++ .||+|++++.... ..+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 568899999999999999999988655 5999999654322 224578899999887 89999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~~~~----l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 9999999999999987543 89999999999999999999999 8999999999999999999999999999863
Q ss_pred CCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCC--ccHhHHHHHHhhhCcchhh
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRG--LNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 542 (603)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .....+.....
T Consensus 204 ~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i-------- 274 (396)
T 4dc2_A 204 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI-------- 274 (396)
T ss_dssp CCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHH--------
T ss_pred ccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHH--------
Confidence 3222 234556799999999999999999999999999999999999999964321111 11111111111
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSM------NQVLQ 581 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~------~evl~ 581 (603)
.......+...+.++.+++.+||+.||++||++ +|+++
T Consensus 275 -~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 275 -LEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp -HHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred -hccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 111122333456789999999999999999995 56664
No 54
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=5.8e-42 Score=354.08 Aligned_cols=254 Identities=22% Similarity=0.308 Sum_probs=204.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCC-----CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRS-----REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
+.|++.+.||+|+||.||+|.+.. +..||||++... .....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 568889999999999999999874 567999998532 22245678999999999999999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC---eEEeecccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE---PHVSDFGLA 461 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfG~~ 461 (603)
||||+++|+|.+++.........+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999988876543344589999999999999999999999 8999999999999987655 999999999
Q ss_pred cccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchh
Q 007455 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541 (603)
Q Consensus 462 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (603)
+....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......... ...
T Consensus 181 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~i~~~~-~~~ 251 (351)
T 3c0i_A 181 IQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-------RLFEGIIKGK-YKM 251 (351)
T ss_dssp EECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-------HHHHHHHHTC-CCC
T ss_pred eEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-------HHHHHHHcCC-CCC
Confidence 87654322 23345699999999999988999999999999999999999999975311 1111111110 000
Q ss_pred hhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 542 VIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 542 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. +......+.++.+++.+||..||++|||+.|+++
T Consensus 252 --~---~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 252 --N---PRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp --C---HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --C---ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 0000123467999999999999999999999985
No 55
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.6e-42 Score=356.50 Aligned_cols=249 Identities=23% Similarity=0.324 Sum_probs=204.1
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCCC---CChHHHHHHHHHHHhhC-CCCeeeecceeeecCCcc
Q 007455 308 EKLEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRSR---EGSDQVFERELEILGSI-KHINLVNLRGYCRLPATK 382 (603)
Q Consensus 308 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 382 (603)
...++|++.+.||+|+||.||+|.++.+ ..||+|+++... ......+..|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 3567899999999999999999999754 569999986532 23345678899999877 899999999999999999
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
|+||||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+|||++.+|.+||+|||+++
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 999999999999999986543 89999999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 463 LLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 463 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
...... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .........
T Consensus 167 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~------- 232 (345)
T 1xjd_A 167 ENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE------EELFHSIRM------- 232 (345)
T ss_dssp CCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH-------
T ss_pred hcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHHh-------
Confidence 643322 223456799999999999998999999999999999999999999975321 111111111
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMN-QVL 580 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~-evl 580 (603)
.....+...+.++.+++.+||..||++||++. |++
T Consensus 233 ---~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 233 ---DNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ---CCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ---CCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11122333456799999999999999999997 665
No 56
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-41 Score=347.17 Aligned_cols=250 Identities=21% Similarity=0.290 Sum_probs=204.4
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEec
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYL 389 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 389 (603)
++|++.+.||+|+||.||+|.+..+ ..+|+|.+... ......+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 5788899999999999999998864 45999988643 234456889999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC--CCCeEEeecccccccCCC
Q 007455 390 SMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE--NLEPHVSDFGLAKLLVDE 467 (603)
Q Consensus 390 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfG~~~~~~~~ 467 (603)
++|+|.+++.... ..+++..++.++.|++.||.|||++ +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 84 ~g~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 84 SGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred CCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 9999999997543 2389999999999999999999999 8999999999999987 789999999999877543
Q ss_pred CcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccC
Q 007455 468 EAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547 (603)
Q Consensus 468 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (603)
. ......||+.|+|||++.+..++.++||||+|+++|||++|..||..... .............. ..
T Consensus 158 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~---~~-- 224 (321)
T 1tki_A 158 D--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN------QQIIENIMNAEYTF---DE-- 224 (321)
T ss_dssp C--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCCC---CH--
T ss_pred C--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHcCCCCC---Ch--
Confidence 3 23445689999999999988889999999999999999999999975321 11111111111000 00
Q ss_pred CCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 548 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
......+.++.+++.+||..||++|||+.|+++
T Consensus 225 -~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 225 -EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp -HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000123467999999999999999999999997
No 57
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=7.4e-42 Score=347.91 Aligned_cols=245 Identities=25% Similarity=0.353 Sum_probs=204.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCC---CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|+.+++.++||||+++++++.+....|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467888999999999999999987 4567999998643 123345678999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.+|.+||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQR----FPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHHHTSS----CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 999999999999987543 89999999999999999999998 89999999999999999999999999998754
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.. .....||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ..........
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i~~~--------- 218 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEKILNA--------- 218 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHC---------
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHhC---------
Confidence 32 2345799999999999998999999999999999999999999965321 1111111111
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRP-----SMNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~evl~ 581 (603)
....+...+.++.+++.+||..||++|| +++|+++
T Consensus 219 -~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 219 -ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1112233456799999999999999999 8999984
No 58
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.3e-42 Score=348.19 Aligned_cols=260 Identities=28% Similarity=0.438 Sum_probs=210.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC------CCCEEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeecCCcc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN------DCGTFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRLPATK 382 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 382 (603)
.++|.+.+.||+|+||.||+|.+. ++..||+|.+..... ...+.+.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 467888899999999999999873 235699999875432 2335688999999999999999999999999999
Q ss_pred EEEEEecCCCCccccccccCC--------------------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCC
Q 007455 383 LLIYDYLSMGSLDDFLHEHGE--------------------GQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKS 442 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 442 (603)
++||||+++|+|.+++..... ....+++..++.++.|+++||+|||++ +++||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999986543 123488999999999999999999999 899999999
Q ss_pred CCeEECCCCCeEEeecccccccCCCCcc-eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccc
Q 007455 443 SNILLDENLEPHVSDFGLAKLLVDEEAH-VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFV 520 (603)
Q Consensus 443 ~NIll~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~ 520 (603)
+||+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999876544332 2233457788999999998889999999999999999999 9999865322
Q ss_pred cCCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 521 KRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
. .. ... .... .....+...+.++.+++.+||+.||++|||++|+++.|+++.
T Consensus 259 ~---~~---~~~-~~~~--------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 259 E---RL---FNL-LKTG--------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp G---GH---HHH-HHTT--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H---HH---HHH-hhcC--------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 11 111 1111 111223345578999999999999999999999999998764
No 59
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.1e-42 Score=347.48 Aligned_cols=261 Identities=23% Similarity=0.315 Sum_probs=201.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCC--ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE--GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
.++|++.+.||+|+||+||+|.+.+++.||+|++..... .....+.+|++++++++||||+++++++.++...++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 467888999999999999999998888999999965432 234678899999999999999999999999999999999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCC
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE 467 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~ 467 (603)
|+++ +|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FMEK-DLKKVLDENK---TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCSE-EHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCCC-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9986 8888776543 2389999999999999999999999 8999999999999999999999999999876533
Q ss_pred CcceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcc---hh--
Q 007455 468 EAHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRL---ED-- 541 (603)
Q Consensus 468 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~-- 541 (603)
.. ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... .....+......... ..
T Consensus 173 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 173 VR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD---DQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp CC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT---THHHHHHHHHCCCCTTTSGGGT
T ss_pred cc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHHCCCChHHhhhhh
Confidence 22 2334568999999999876 56899999999999999999999999754321 111111111111000 00
Q ss_pred ----hhcccC---CC-----cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 542 ----VIDKRC---AD-----ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 542 ----~~~~~~---~~-----~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
...... .. .....+.++.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000000 00 01123467899999999999999999999986
No 60
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1e-41 Score=340.65 Aligned_cols=256 Identities=30% Similarity=0.449 Sum_probs=210.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEec
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYL 389 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 389 (603)
.++|++.+.||+|+||.||+|.+.++..||+|.+..... ..+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 367888999999999999999998878899999975443 4567899999999999999999999886 45689999999
Q ss_pred CCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCc
Q 007455 390 SMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA 469 (603)
Q Consensus 390 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~ 469 (603)
++++|.+++.... ...+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 90 ~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 90 ENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp TTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred CCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 9999999997532 12389999999999999999999999 899999999999999999999999999987765443
Q ss_pred ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCC
Q 007455 470 HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548 (603)
Q Consensus 470 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (603)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .......... ...
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~~---------~~~ 229 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERG---------YRM 229 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHHHTT---------CCC
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH------HHHHHHHhcc---------cCC
Confidence 33334557788999999988889999999999999999999 8999864321 1111111111 011
Q ss_pred CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 549 DADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
..+...+.++.+++.+||+.+|++|||++++++.|++..
T Consensus 230 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 122344568999999999999999999999999998754
No 61
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.7e-42 Score=351.41 Aligned_cols=255 Identities=25% Similarity=0.427 Sum_probs=201.4
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCC-----EEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~-----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
++|+..+.||+|+||+||+|.+..++ +||+|.+.... ....+.+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 57888899999999999999976443 26888875432 334567999999999999999999999998754 789
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
|+||+.+|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCTTCBHHHHHHHSTT---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 9999999999999986432 389999999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCcc-eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 465 VDEEAH-VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 465 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
...... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ... ......
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~----~~~~~~----- 235 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---EIS----SILEKG----- 235 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHH----HHHHTT-----
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH---HHH----HHHHcC-----
Confidence 544322 2233456889999999999999999999999999999999 99999753211 111 111111
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.....+...+.++.+++.+||+.+|++|||++|+++.|+.+.
T Consensus 236 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 236 ---ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp ---CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 111123345567999999999999999999999999998754
No 62
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.3e-42 Score=340.18 Aligned_cols=253 Identities=30% Similarity=0.485 Sum_probs=195.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCC----ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE----GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+. +..+|||++..... ...+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357888999999999999999986 57899999865432 2235688999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC--------CCCeEEee
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE--------NLEPHVSD 457 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--------~~~~kl~D 457 (603)
|||+++++|.+++... .+++..++.++.|+++||+|||+++..+++||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999999999998643 3899999999999999999999982222999999999999986 67899999
Q ss_pred cccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhC
Q 007455 458 FGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537 (603)
Q Consensus 458 fG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 537 (603)
||+++...... .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... ....... ..
T Consensus 160 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~-~~ 229 (271)
T 3dtc_A 160 FGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL------AVAYGVA-MN 229 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHH-TS
T ss_pred CCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHhhh-cC
Confidence 99998654332 22456899999999999889999999999999999999999999653210 0111111 11
Q ss_pred cchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 007455 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585 (603)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~ 585 (603)
......+...+..+.+++.+||+.+|++|||++|+++.|++
T Consensus 230 -------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 230 -------KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp -------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred -------CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 11112233455679999999999999999999999999975
No 63
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=343.57 Aligned_cols=270 Identities=24% Similarity=0.302 Sum_probs=212.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCC--ccEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPA--TKLLIY 386 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 386 (603)
++|.+.+.||+|+||.||+|.+.. +..||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 467888999999999999999885 5679999996533 233566889999999999999999999987665 679999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE----CCCCCeEEeeccccc
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL----DENLEPHVSDFGLAK 462 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfG~~~ 462 (603)
||+++|+|.+++..... ...+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp ECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred eCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999986533 22389999999999999999999999 89999999999999 788889999999998
Q ss_pred ccCCCCcceeecccccccccCccccc--------cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHh
Q 007455 463 LLVDEEAHVTTVVAGTFGYLAPEYLQ--------SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLL 534 (603)
Q Consensus 463 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 534 (603)
....... .....||+.|+|||++. +..++.++||||||+++|||++|+.||....... .....+....
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~ 240 (319)
T 4euu_A 165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR--RNKEVMYKII 240 (319)
T ss_dssp ECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG--GCHHHHHHHH
T ss_pred ecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc--hhHHHHHHHh
Confidence 7654432 23456899999999886 5678899999999999999999999996432211 1111222222
Q ss_pred hhCc---chhh-------h--cccC---CCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhccc
Q 007455 535 KENR---LEDV-------I--DKRC---ADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588 (603)
Q Consensus 535 ~~~~---~~~~-------~--~~~~---~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 588 (603)
.... +... + .... .......+..+.+++.+||+.||++|||++|+++-..+.+.
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 1111 0000 0 0001 12345777889999999999999999999999998887664
No 64
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=7.8e-42 Score=350.12 Aligned_cols=251 Identities=22% Similarity=0.355 Sum_probs=199.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCCc------
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPAT------ 381 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 381 (603)
.++|++.+.||+|+||.||+|.+. ++..||||++.... ....+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 467889999999999999999987 56789999996543 3345679999999999999999999998865432
Q ss_pred ---------------------------------------------------cEEEEEecCCCCccccccccCCCCccCCH
Q 007455 382 ---------------------------------------------------KLLIYDYLSMGSLDDFLHEHGEGQQLLNW 410 (603)
Q Consensus 382 ---------------------------------------------------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~ 410 (603)
.++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 7899999999999999987543 233677
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCc-----------ceeecccccc
Q 007455 411 SARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA-----------HVTTVVAGTF 479 (603)
Q Consensus 411 ~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~-----------~~~~~~~gt~ 479 (603)
..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 78999999999999999999 899999999999999999999999999987755421 1223456999
Q ss_pred cccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHH
Q 007455 480 GYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAIL 559 (603)
Q Consensus 480 ~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 559 (603)
.|+|||++.+..++.++||||+|+++|||++|..|+.... .... .......+......+.++.
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~--------~~~~---------~~~~~~~~~~~~~~~~~~~ 303 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV--------RIIT---------DVRNLKFPLLFTQKYPQEH 303 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH--------HHHH---------HHHTTCCCHHHHHHCHHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH--------HHHH---------HhhccCCCcccccCChhHH
Confidence 9999999998899999999999999999999877742110 0000 0011111112234446789
Q ss_pred HHHHHcccCCCCCCCCHHHHHH
Q 007455 560 EIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 560 ~li~~cl~~~P~~RPs~~evl~ 581 (603)
+++.+||+.||++|||++|+++
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHccCCCCcCCCHHHHhh
Confidence 9999999999999999999986
No 65
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.2e-41 Score=345.12 Aligned_cols=260 Identities=27% Similarity=0.418 Sum_probs=201.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
.++|.+.+.||+|+||.||+|.+.+ .+|+|.++..... ..+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 3678899999999999999998754 6899988654333 3356899999999999999999999875 456899999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCC
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE 467 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~ 467 (603)
|+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred cCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 999999999987543 2389999999999999999999999 8999999999999999999999999999865432
Q ss_pred -CcceeecccccccccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 468 -EAHVTTVVAGTFGYLAPEYLQ---SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 468 -~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
.........||+.|+|||++. +..++.++||||||+++|||++|+.||...... ............
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~------~~~~~~~~~~~~---- 255 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYA---- 255 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHHTCC----
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH------HHHHHHHhcCCC----
Confidence 222234456999999999985 567888999999999999999999999753211 111111111111
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhccc
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 588 (603)
.+.........+..+.+++.+||+.+|++|||+.|+++.|+....
T Consensus 256 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 256 SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred CcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 111112223445679999999999999999999999999987653
No 66
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.4e-41 Score=363.01 Aligned_cols=251 Identities=29% Similarity=0.443 Sum_probs=205.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCC-ccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPA-TKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 388 (603)
.++|++.+.||+|+||.||+|.+. +..||||+++... ..+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 467888899999999999999987 4689999997543 4467999999999999999999999987665 78999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++|+|.+++...+. ..+++..++.++.|+++||+|||++ +++||||||+|||++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 342 (450)
T ss_dssp CTTCBHHHHHHHHCT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence 999999999987532 3378999999999999999999999 8999999999999999999999999999854322
Q ss_pred cceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccC
Q 007455 469 AHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547 (603)
Q Consensus 469 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (603)
.....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .. ....... ..
T Consensus 343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~---~~---~~~i~~~---------~~ 404 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DV---VPRVEKG---------YK 404 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT---TH---HHHHHTT---------CC
T ss_pred ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HH---HHHHHcC---------CC
Confidence 122357889999999999999999999999999999998 99998653211 11 1111111 11
Q ss_pred CCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 548 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
...+...+.++.+++.+||+.||++|||++++++.|+++.
T Consensus 405 ~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 405 MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1223345678999999999999999999999999998764
No 67
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=359.13 Aligned_cols=259 Identities=25% Similarity=0.362 Sum_probs=207.5
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC------CCCEEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN------DCGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKL 383 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 383 (603)
++|++.+.||+|+||.||+|.+. .+..||||++.... ......+.+|+.++++++||||+++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 57888999999999999999954 23469999986543 233456889999999999999999999999999999
Q ss_pred EEEEecCCCCccccccccCC---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC---CeEEee
Q 007455 384 LIYDYLSMGSLDDFLHEHGE---GQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL---EPHVSD 457 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~D 457 (603)
+||||+++|+|.+++..... ....+++..++.++.|+++||+|||++ +|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence 99999999999999986542 223489999999999999999999999 899999999999999655 499999
Q ss_pred cccccccCCCC-cceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhh
Q 007455 458 FGLAKLLVDEE-AHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLK 535 (603)
Q Consensus 458 fG~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 535 (603)
||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |..||..... .........
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~------~~~~~~i~~ 301 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QEVLEFVTS 301 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHHHT
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHc
Confidence 99997653221 122334567899999999998899999999999999999998 9999865321 111111111
Q ss_pred hCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 536 ENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
. .....+...+..+.+++.+||+.+|++|||++++++.|+...
T Consensus 302 ~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 302 G---------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp T---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C---------CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 1 111223344567999999999999999999999999987654
No 68
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=346.55 Aligned_cols=249 Identities=27% Similarity=0.339 Sum_probs=203.5
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC------hHHHHHHHHHHHhhCCCCeeeecceeeecCCccE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG------SDQVFERELEILGSIKHINLVNLRGYCRLPATKL 383 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 383 (603)
+.|++.+.||+|+||.||+|.+.. +..||+|.+...... ..+.+.+|+.++++++||||+++++++......+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 568889999999999999999874 567999998654321 3567899999999999999999999999999999
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC----CeEEeecc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL----EPHVSDFG 459 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DfG 459 (603)
+||||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 91 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999997643 389999999999999999999998 899999999999999887 79999999
Q ss_pred cccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhC-c
Q 007455 460 LAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN-R 538 (603)
Q Consensus 460 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 538 (603)
+++....... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ........... .
T Consensus 164 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~~~~~~~~ 235 (326)
T 2y0a_A 164 LAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANVSAVNYE 235 (326)
T ss_dssp TCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHHTCCC
T ss_pred CCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH------HHHHHHHHhcCCC
Confidence 9987654322 2345699999999999988999999999999999999999999965321 11111111100 0
Q ss_pred chhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 539 LEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
... ......+..+.+++.+||..||++|||++|+++
T Consensus 236 ~~~-------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 FED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCH-------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cCc-------cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 001123457899999999999999999999986
No 69
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=342.14 Aligned_cols=249 Identities=24% Similarity=0.375 Sum_probs=196.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC--------------------------hHHHHHHHHHHHh
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG--------------------------SDQVFERELEILG 362 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~ 362 (603)
.++|++.+.||+|+||.||+|.+.. +..||||++...... ..+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4678899999999999999999875 456999998643211 1245889999999
Q ss_pred hCCCCeeeecceeeec--CCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecC
Q 007455 363 SIKHINLVNLRGYCRL--PATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDI 440 (603)
Q Consensus 363 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 440 (603)
+++||||+++++++.. ....++||||+++++|.+++... .+++..+..++.|+++||+|||++ +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-----PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999986 56789999999999999876532 389999999999999999999999 8999999
Q ss_pred CCCCeEECCCCCeEEeecccccccCCCCcceeecccccccccCccccccCC---CCcccchHhHHHHHHHHHhCCCCCCc
Q 007455 441 KSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGR---ATEKSDVYSFGVLLLELVTGKRPTDP 517 (603)
Q Consensus 441 kp~NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~vl~elltg~~p~~~ 517 (603)
||+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999987654332 234457999999999997655 37789999999999999999999965
Q ss_pred ccccCCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 518 TFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.. ...+.... ...... . ......+.++.+++.+||+.||++|||++|+++
T Consensus 243 ~~------~~~~~~~~-~~~~~~------~-~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 243 ER------IMCLHSKI-KSQALE------F-PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SS------HHHHHHHH-HHCCCC------C-CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cc------HHHHHHHH-hcccCC------C-CCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 32 11111111 111110 0 011234467999999999999999999999875
No 70
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=360.92 Aligned_cols=252 Identities=23% Similarity=0.274 Sum_probs=203.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
.++|++.+.||+|+||.||+|.+.. +..+|+|++...... ..+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 4678999999999999999999874 456999998654432 3356889999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEEC---CCCCeEEeecccccc
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKL 463 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfG~~~~ 463 (603)
||+++|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||+++.
T Consensus 90 E~~~gg~L~~~i~~~~~----~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 90 DLVTGGELFEDIVAREY----YSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp CCCBCCBHHHHHHHCSC----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EeCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 99999999999886543 89999999999999999999999 899999999999998 467899999999987
Q ss_pred cCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 464 LVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 464 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
...... ......||+.|+|||++.+..++.++||||+||++|+|++|..||..... ........ .....
T Consensus 163 ~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~------~~~~~~i~-~~~~~--- 231 (444)
T 3soa_A 163 VEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ------HRLYQQIK-AGAYD--- 231 (444)
T ss_dssp CCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHH-HTCCC---
T ss_pred ecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH------HHHHHHHH-hCCCC---
Confidence 654332 23346799999999999988999999999999999999999999965321 11111111 11100
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.. .......+.++.+++.+||+.||++|||++|+++
T Consensus 232 -~~-~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 232 -FP-SPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp -CC-TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -CC-ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00 0011234567999999999999999999999987
No 71
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.8e-42 Score=357.74 Aligned_cols=268 Identities=27% Similarity=0.425 Sum_probs=211.3
Q ss_pred hHHHHHHhhCCCCCCeeeecCCeEEEEEEEC------CCCEEEEEEeCCCCCC-hHHHHHHHHHHHhhC-CCCeeeecce
Q 007455 303 SCEIIEKLEALDEEDVVGSGGFGTVYRMVMN------DCGTFAVKRIDRSREG-SDQVFERELEILGSI-KHINLVNLRG 374 (603)
Q Consensus 303 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~ 374 (603)
...+....++|++.+.||+|+||.||+|.+. .++.||||++...... ..+.+.+|++++.++ +||||+++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence 3344445678999999999999999999843 2346999999754332 335689999999999 7999999999
Q ss_pred eeecCCc-cEEEEEecCCCCccccccccCCC-------------------------------------------------
Q 007455 375 YCRLPAT-KLLIYDYLSMGSLDDFLHEHGEG------------------------------------------------- 404 (603)
Q Consensus 375 ~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------- 404 (603)
++...+. .++||||+++|+|.+++......
T Consensus 94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (359)
T 3vhe_A 94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL 173 (359)
T ss_dssp EECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------
T ss_pred eeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccccc
Confidence 9887654 89999999999999999765321
Q ss_pred -------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCc-c
Q 007455 405 -------------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA-H 470 (603)
Q Consensus 405 -------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~-~ 470 (603)
...+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 250 (359)
T 3vhe_A 174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 250 (359)
T ss_dssp ----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE
T ss_pred chhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccch
Confidence 12288999999999999999999999 899999999999999999999999999987644322 2
Q ss_pred eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCC
Q 007455 471 VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549 (603)
Q Consensus 471 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (603)
......||+.|+|||++.+..++.++||||||+++|||++ |+.||...... .......... ....
T Consensus 251 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~~~~--------~~~~ 316 (359)
T 3vhe_A 251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCRRLKEG--------TRMR 316 (359)
T ss_dssp EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS------HHHHHHHHHT--------CCCC
T ss_pred hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh------HHHHHHHHcC--------CCCC
Confidence 3344668899999999998999999999999999999998 99998653211 0111111111 1111
Q ss_pred cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 550 ~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.+...+.++.+++.+||+.+|++|||++|+++.|++..
T Consensus 317 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 317 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 22334567999999999999999999999999998754
No 72
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2e-42 Score=347.54 Aligned_cols=253 Identities=21% Similarity=0.390 Sum_probs=204.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCC--------EEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCcc
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCG--------TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATK 382 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~--------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 382 (603)
++|.+.+.||+|+||.||+|.+..++ .||+|.+........+.+.+|+.++++++||||+++++++..++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 57888899999999999999876533 5999999776666677899999999999999999999999999999
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC--------eE
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE--------PH 454 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~k 454 (603)
++||||+++|+|.+++.... ..+++..++.++.|++.||.|||++ +|+||||||+||+++.++. +|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNK---NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred EEEEECCCCCCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence 99999999999999998643 2388999999999999999999999 8999999999999998887 99
Q ss_pred EeecccccccCCCCcceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHH
Q 007455 455 VSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTL 533 (603)
Q Consensus 455 l~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 533 (603)
|+|||++...... ....|++.|+|||++.+ ..++.++||||+|+++|||++|..|+..... ........
T Consensus 162 l~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-----~~~~~~~~ 231 (289)
T 4fvq_A 162 LSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-----SQRKLQFY 231 (289)
T ss_dssp ECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHH
T ss_pred eccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-----hHHHHHHh
Confidence 9999998765332 23457889999999987 6789999999999999999996655432211 11111111
Q ss_pred hhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCC
Q 007455 534 LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 590 (603)
... ...+...+.++.+++.+||+.||++|||++|+++.|+++..+.
T Consensus 232 ~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 232 EDR-----------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp HTT-----------CCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred hcc-----------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 000 0111122346889999999999999999999999999876443
No 73
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.3e-42 Score=364.42 Aligned_cols=256 Identities=22% Similarity=0.312 Sum_probs=206.4
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECCCC-EEEEEEeCCCC---CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSR---EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
..++|++.++||+|+||+||+|.+.+++ .||+|++.+.. ......+.+|+.++..++||||+++++++.+.+..|+
T Consensus 72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 151 (437)
T 4aw2_A 72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYL 151 (437)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEE
Confidence 3578999999999999999999998654 59999985421 1122347899999999999999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 152 V~Ey~~gg~L~~~l~~~~---~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~ 225 (437)
T 4aw2_A 152 VMDYYVGGDLLTLLSKFE---DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKL 225 (437)
T ss_dssp EECCCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEecCCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhc
Confidence 999999999999998632 2389999999999999999999999 8999999999999999999999999999877
Q ss_pred CCCCcceeecccccccccCccccc-----cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcc
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQ-----SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRL 539 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (603)
............||+.|+|||++. ...++.++||||+||++|||++|+.||..... ...........
T Consensus 226 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~-- 297 (437)
T 4aw2_A 226 MEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHK-- 297 (437)
T ss_dssp CTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHH--
T ss_pred ccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh------hHHHHhhhhcc--
Confidence 655554455578999999999986 45789999999999999999999999975321 11111111100
Q ss_pred hhhhcccCCCcCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 007455 540 EDVIDKRCADADMETVEAILEIAARCTDANPDD--RPSMNQVLQ 581 (603)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--RPs~~evl~ 581 (603)
.....+......+.++.+|+.+||..+|++ ||+++|+++
T Consensus 298 ---~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 298 ---ERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp ---HHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ---ccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 000111111234567999999999888888 999999986
No 74
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8e-42 Score=355.59 Aligned_cols=250 Identities=27% Similarity=0.397 Sum_probs=204.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCC---CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+..+ ..||+|++... .....+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 46788999999999999999998754 56999998542 223346688999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+.+|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~e~~~gg~L~~~l~~~~~----l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNVH----FKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp ECCCTTEEHHHHHHTTCC----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 999999999999986433 89999999999999999999999 89999999999999999999999999998765
Q ss_pred CCCcceeecccccccccCcccccc---CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQS---GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .......
T Consensus 167 ~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---~~~~~~~---------- 231 (384)
T 4fr4_A 167 RET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS---SKEIVHT---------- 231 (384)
T ss_dssp TTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC---HHHHHHH----------
T ss_pred CCC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc---HHHHHHH----------
Confidence 432 2345679999999999863 458899999999999999999999997532211 1111111
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPS-MNQVLQ 581 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-~~evl~ 581 (603)
+.......+...+.++.+++.+||+.+|++||+ ++++++
T Consensus 232 ~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 232 FETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 111122233445678999999999999999998 777764
No 75
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.6e-41 Score=339.93 Aligned_cols=260 Identities=17% Similarity=0.214 Sum_probs=207.5
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccEEEEEe
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
++|++.+.||+|+||.||+|.+. ++..||||++..... ...+.+|+.+++.+ +|+|++++++++......++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 46888999999999999999975 455799998864432 23478899999999 799999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC-----eEEeecccccc
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE-----PHVSDFGLAKL 463 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfG~~~~ 463 (603)
+ +++|.+++...+. .+++..++.++.|+++||+|||++ +|+||||||+||+++.++. +||+|||+++.
T Consensus 88 ~-~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 88 L-GPSLEDLLDLCGR---KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp C-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred c-CCCHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 9 8999999986432 389999999999999999999998 8999999999999988776 99999999987
Q ss_pred cCCCCcc------eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhC
Q 007455 464 LVDEEAH------VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537 (603)
Q Consensus 464 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 537 (603)
....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......................
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 240 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc
Confidence 6543321 2344669999999999999899999999999999999999999997643211111111111111111
Q ss_pred cchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.... .....+.++.+++.+||+.+|++|||++++++.|+++.
T Consensus 241 ~~~~--------~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 241 PLRE--------LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp CHHH--------HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred cHHH--------HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 1111 11123467999999999999999999999999998755
No 76
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.2e-41 Score=346.86 Aligned_cols=259 Identities=15% Similarity=0.194 Sum_probs=205.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccEEEEEe
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
++|++.+.||+|+||.||+|.+. ++..||||.+..... ...+.+|+++++++ +||||+++++++...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 46888999999999999999985 455699999865432 23488999999999 999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC-----eEEeecccccc
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE-----PHVSDFGLAKL 463 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfG~~~~ 463 (603)
+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 87 ~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 87 L-GPSLEDLFDLCD---RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp C-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred C-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 9 899999998642 2389999999999999999999999 8999999999999999887 99999999987
Q ss_pred cCCCCcc------eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhC
Q 007455 464 LVDEEAH------VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537 (603)
Q Consensus 464 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 537 (603)
+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......................
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 6543321 1245679999999999999999999999999999999999999997642211111111111100000
Q ss_pred cchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
... . .....+ ++.+++..||+.+|.+||+++++.+.|++..
T Consensus 240 ~~~----~----~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 240 PIE----V----LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp CHH----H----HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred CHH----H----HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 000 0 001123 7999999999999999999999999988654
No 77
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1e-41 Score=351.59 Aligned_cols=245 Identities=22% Similarity=0.300 Sum_probs=205.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCC---CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSR---EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|+.+++.++||||+++++++.+....|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 4678899999999999999999874 5679999985432 23345688999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++|+|.+++...+. +++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 120 ~e~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EECCTTCBHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EcCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceecc
Confidence 999999999999987543 89999999999999999999999 89999999999999999999999999998764
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.. .....||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ..........
T Consensus 193 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~--------- 253 (350)
T 1rdq_E 193 GR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP------IQIYEKIVSG--------- 253 (350)
T ss_dssp SC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHC---------
T ss_pred CC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH------HHHHHHHHcC---------
Confidence 33 2345799999999999988999999999999999999999999975321 1111111111
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPS-----MNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~evl~ 581 (603)
....+...+.++.+++.+||+.||++||+ ++|+++
T Consensus 254 -~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 254 -KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 11123345577999999999999999998 888875
No 78
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1e-41 Score=342.32 Aligned_cols=257 Identities=30% Similarity=0.447 Sum_probs=213.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
.++|++.+.||+|+||.||+|.+.+ +..||+|.+.... ...+.+.+|++++++++||||+++++++......++||||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 4678888999999999999999986 4569999986543 3456789999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++++|.+++..... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.++|+|||++.......
T Consensus 91 ~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 91 MTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp CTTEEHHHHHHHCCT--TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred CCCCcHHHHHHhccc--CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 999999999986432 3489999999999999999999999 89999999999999999999999999998876555
Q ss_pred cceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccC
Q 007455 469 AHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547 (603)
Q Consensus 469 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (603)
........+++.|+|||.+.+..++.++||||+|+++|+|++ |..||...... .. ....... ..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---~~---~~~~~~~---------~~ 230 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QV---YELLEKD---------YR 230 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GH---HHHHHTT---------CC
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HH---HHHHhcc---------CC
Confidence 444555667889999999998899999999999999999999 89998653211 11 1111111 11
Q ss_pred CCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 548 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
...+...+..+.+++.+||..||++|||++|+++.|++..
T Consensus 231 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 1223344567999999999999999999999999998754
No 79
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.7e-41 Score=351.76 Aligned_cols=251 Identities=25% Similarity=0.333 Sum_probs=203.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
.++|++.+.||+|+||.||+|.+.. +..||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4678999999999999999999874 567999999654332 2356889999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC---CeEEeecccccc
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL---EPHVSDFGLAKL 463 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfG~~~~ 463 (603)
||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++ .+||+|||++..
T Consensus 108 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp CCCCSCBHHHHHTTCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 9999999999887643 389999999999999999999999 899999999999998654 599999999987
Q ss_pred cCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 464 LVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 464 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........ ......
T Consensus 181 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~------~~~~~~i~-~~~~~~-- 249 (362)
T 2bdw_A 181 VNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIK-AGAYDY-- 249 (362)
T ss_dssp CTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HTCCCC--
T ss_pred ecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHH-hCCCCC--
Confidence 654322 2345799999999999988999999999999999999999999965321 11111111 111000
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
........+.++.+++.+||..||++|||+.|+++
T Consensus 250 ---~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 250 ---PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp ---CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00011234567999999999999999999999985
No 80
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=9.6e-42 Score=342.63 Aligned_cols=260 Identities=25% Similarity=0.359 Sum_probs=199.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCC--ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE--GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
++|++.+.||+|+||.||+|.+..+..||+|++..... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57888999999999999999998788999999965432 2246688999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++ +|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEG---GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 986 89888875422 388999999999999999999999 89999999999999999999999999998764322
Q ss_pred cceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhC---cchhh--
Q 007455 469 AHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN---RLEDV-- 542 (603)
Q Consensus 469 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-- 542 (603)
. ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... ............. .+...
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 155 R-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA---DQLMRIFRILGTPNSKNWPNVTE 230 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred c-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHHCCCChhhchhhhc
Confidence 2 2234568999999999865 45899999999999999999999999753211 0100010100000 00000
Q ss_pred ---hcccCC--------CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 543 ---IDKRCA--------DADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 543 ---~~~~~~--------~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.++... ......+.++.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000 011234567899999999999999999999986
No 81
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.6e-41 Score=347.36 Aligned_cols=248 Identities=26% Similarity=0.343 Sum_probs=195.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEE----CCCCEEEEEEeCCCC----CChHHHHHHHHHHHhhCCCCeeeecceeeecCCc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVM----NDCGTFAVKRIDRSR----EGSDQVFERELEILGSIKHINLVNLRGYCRLPAT 381 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 381 (603)
.++|++.+.||+|+||.||+|.+ ..+..||+|+++... ......+.+|+.+++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46788999999999999999998 366789999997542 2233457889999999999999999999999999
Q ss_pred cEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccc
Q 007455 382 KLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461 (603)
Q Consensus 382 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~ 461 (603)
.++||||+++|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGI----FMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHhCCC----CCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 9999999999999999986543 88999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchh
Q 007455 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541 (603)
Q Consensus 462 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (603)
+...... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ..........
T Consensus 169 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~----- 236 (327)
T 3a62_A 169 KESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR------KKTIDKILKC----- 236 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHT-----
T ss_pred cccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhC-----
Confidence 7643322 223446799999999999988899999999999999999999999975321 1111111111
Q ss_pred hhcccCCCcCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 007455 542 VIDKRCADADMETVEAILEIAARCTDANPDDRP-----SMNQVLQ 581 (603)
Q Consensus 542 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~evl~ 581 (603)
....+...+.++.+++.+||+.+|++|| +++|+++
T Consensus 237 -----~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 237 -----KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -----CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1112233456799999999999999999 7888875
No 82
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.6e-41 Score=349.58 Aligned_cols=255 Identities=21% Similarity=0.319 Sum_probs=203.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCCCCC---hHHHHHHHHHHHhhC-CCCeeeecceeeecCCccEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRSREG---SDQVFERELEILGSI-KHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 384 (603)
.++|++.+.||+|+||.||+|.+..+ +.||+|++...... ..+.+.+|..++.++ +||||+++++++...+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 46788899999999999999998754 46999999754322 234578999999988 89999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 88 v~e~~~gg~L~~~l~~~~~----l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EECCCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 9999999999999986543 89999999999999999999999 8999999999999999999999999999864
Q ss_pred CCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCc--cHhHHHHHHhhhCcchhh
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGL--NVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 542 (603)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......... ............
T Consensus 161 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~------ 233 (345)
T 3a8x_A 161 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE------ 233 (345)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH------
T ss_pred cCCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc------
Confidence 3222 2234567999999999999989999999999999999999999999653211100 111111111111
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSM------NQVLQ 581 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~------~evl~ 581 (603)
.....+...+.++.+++.+||+.||++||++ +|+++
T Consensus 234 ---~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 234 ---KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp ---CCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred ---CCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 1112233455679999999999999999995 67663
No 83
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2e-41 Score=353.69 Aligned_cols=252 Identities=24% Similarity=0.323 Sum_probs=206.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
.+.|++.+.||+|+||.||+|.+.. +..+|+|.+..........+.+|+.+++.++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 4678999999999999999999874 557999998765544556789999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC--CCCeEEeecccccccCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE--NLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfG~~~~~~~ 466 (603)
+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++....
T Consensus 130 ~~gg~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 130 LSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 99999999987543 2389999999999999999999999 8999999999999974 47799999999987754
Q ss_pred CCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhccc
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKR 546 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (603)
... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........... .. .
T Consensus 204 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~i~~~~-~~--~--- 269 (387)
T 1kob_A 204 DEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD------LETLQNVKRCD-WE--F--- 269 (387)
T ss_dssp TSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHHCC-CC--C---
T ss_pred Ccc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH------HHHHHHHHhCC-CC--C---
Confidence 432 2345699999999999988999999999999999999999999975321 11111111110 00 0
Q ss_pred CCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 547 CADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
........+.++.+++.+||..||++|||++|+++
T Consensus 270 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 270 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 01112234567999999999999999999999986
No 84
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3e-42 Score=348.57 Aligned_cols=262 Identities=25% Similarity=0.406 Sum_probs=205.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEE-----CCCCEEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecC--Ccc
Q 007455 311 EALDEEDVVGSGGFGTVYRMVM-----NDCGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLP--ATK 382 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 382 (603)
+.|++.+.||+|+||.||+|.+ ..+..||+|++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578889999999999999984 245679999997543 23346789999999999999999999999876 668
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 999999999999999965432 389999999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCCcc--eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccccc--------CCccHhHHHHH
Q 007455 463 LLVDEEAH--VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVK--------RGLNVVGWMNT 532 (603)
Q Consensus 463 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~--------~~~~~~~~~~~ 532 (603)
........ ......||..|+|||++.+..++.++||||+|+++|||++|..|+...... ...........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 77554332 223456888899999999888999999999999999999999986432110 00000000000
Q ss_pred HhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 007455 533 LLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQE 586 (603)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~ 586 (603)
. .........+...+.++.+++.+||+.||++|||++|+++.|+++
T Consensus 255 ~--------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 255 T--------LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp H--------HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred H--------HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 0 011111122334567899999999999999999999999999874
No 85
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-41 Score=349.57 Aligned_cols=265 Identities=28% Similarity=0.441 Sum_probs=209.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC------CCCEEEEEEeCCCC-CChHHHHHHHHHHHhhC-CCCeeeecceeeecCCc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN------DCGTFAVKRIDRSR-EGSDQVFERELEILGSI-KHINLVNLRGYCRLPAT 381 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 381 (603)
.++|++.+.||+|+||.||+|.+. .+..||+|.+.... ....+.+.+|+.+++++ +||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 468889999999999999999972 23469999997542 23346789999999999 89999999999999999
Q ss_pred cEEEEEecCCCCccccccccCCC-------------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCC
Q 007455 382 KLLIYDYLSMGSLDDFLHEHGEG-------------------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKS 442 (603)
Q Consensus 382 ~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 442 (603)
.++||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCh
Confidence 99999999999999999765321 13478999999999999999999999 899999999
Q ss_pred CCeEECCCCCeEEeecccccccCCCCcc-eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccc
Q 007455 443 SNILLDENLEPHVSDFGLAKLLVDEEAH-VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFV 520 (603)
Q Consensus 443 ~NIll~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~ 520 (603)
+||+++.++.+||+|||++......... ......||+.|+|||++.+..++.++||||||+++|||+| |..||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 9999999999999999999876543322 2334557889999999988899999999999999999998 9999865321
Q ss_pred cCCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCCC
Q 007455 521 KRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPC 591 (603)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 591 (603)
. .......... .....+...+.++.+++.+||+.||.+|||++|+++.|+.......
T Consensus 281 ~------~~~~~~~~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 281 D------ANFYKLIQNG--------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp S------HHHHHHHHTT--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred H------HHHHHHHhcC--------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 1 0111111111 0111223345679999999999999999999999999998765443
No 86
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=350.20 Aligned_cols=275 Identities=19% Similarity=0.245 Sum_probs=207.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC----CCEEEEEEeCCCCCCh-----------HHHHHHHHHHHhhCCCCeeeeccee
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND----CGTFAVKRIDRSREGS-----------DQVFERELEILGSIKHINLVNLRGY 375 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l~~~ 375 (603)
++|.+.+.||+|+||.||+|.+.. +..+|+|++....... ...+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 568889999999999999999874 4569999986543221 1236678889999999999999999
Q ss_pred eec----CCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC
Q 007455 376 CRL----PATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451 (603)
Q Consensus 376 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 451 (603)
+.. ....++||||+ +++|.+++...+ .+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 887 67889999999 899999998754 389999999999999999999999 899999999999998887
Q ss_pred --CeEEeecccccccCCCCcc------eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCC
Q 007455 452 --EPHVSDFGLAKLLVDEEAH------VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRG 523 (603)
Q Consensus 452 --~~kl~DfG~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~ 523 (603)
.+||+|||+++.+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-- 266 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD-- 266 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC--
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc--
Confidence 9999999999876433211 113456899999999999888999999999999999999999999642111
Q ss_pred ccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCCCCcccccc
Q 007455 524 LNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSDFYES 598 (603)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~~~~~ 598 (603)
.............. ....+....+ ....+.++.+++.+||+.+|++|||++++++.|++...+..+.+|...
T Consensus 267 ~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~d~~~~ 338 (345)
T 2v62_A 267 PVAVQTAKTNLLDE-LPQSVLKWAP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTK 338 (345)
T ss_dssp HHHHHHHHHHHHHT-TTHHHHHHSC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCCCCCCCCT
T ss_pred cHHHHHHHHhhccc-ccHHHHhhcc--ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcccCCCcccC
Confidence 11111111111111 1111111111 113446799999999999999999999999999998887777776654
No 87
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7e-42 Score=372.75 Aligned_cols=258 Identities=31% Similarity=0.461 Sum_probs=211.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEec
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYL 389 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 389 (603)
.++|++.+.||+|+||.||+|.+.++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 457888899999999999999999888899999976543 45679999999999999999999999876 6789999999
Q ss_pred CCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCc
Q 007455 390 SMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEA 469 (603)
Q Consensus 390 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~ 469 (603)
++|+|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 344 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 344 SKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp TTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred cCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 9999999997532 12388999999999999999999999 899999999999999999999999999987654322
Q ss_pred ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCC
Q 007455 470 HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548 (603)
Q Consensus 470 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (603)
.......++..|+|||++....++.++||||||+++|||++ |+.||..... ........... ..
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~------~~~~~~i~~~~---------~~ 483 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQVERGY---------RM 483 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH------HHHHHHHHTTC---------CC
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCC---------CC
Confidence 22233446788999999998899999999999999999999 8999864321 11111111111 11
Q ss_pred CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 549 DADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
..+...+.++.+|+.+||+.+|++|||++++++.|++....
T Consensus 484 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 484 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 12234556799999999999999999999999999987643
No 88
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.6e-41 Score=350.11 Aligned_cols=249 Identities=22% Similarity=0.319 Sum_probs=204.5
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCC---CCChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccE
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRS---REGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKL 383 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 383 (603)
..++|++.+.||+|+||.||+|.+..+ ..||+|++... .....+.+.+|..++..+ +||||+++++++...+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 457899999999999999999999864 45999998643 223345688999999988 7999999999999999999
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
+||||+++|+|.+++...+. +++..++.++.|++.||+|||++ +|+||||||+|||++.+|.+||+|||+++.
T Consensus 98 lv~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGR----FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99999999999999986543 89999999999999999999999 899999999999999999999999999986
Q ss_pred cCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 464 LVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 464 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
..... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .........
T Consensus 171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~-------- 235 (353)
T 2i0e_A 171 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIME-------- 235 (353)
T ss_dssp CCCTT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH--------
T ss_pred cccCC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH------HHHHHHHHh--------
Confidence 43222 223456799999999999988999999999999999999999999975321 111111111
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPS-----MNQVLQ 581 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~evl~ 581 (603)
.....+...+.++.+++.+||..||++||+ ++|+++
T Consensus 236 --~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 236 --HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp --CCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred --CCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 111223345578999999999999999995 577764
No 89
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.6e-41 Score=339.76 Aligned_cols=256 Identities=26% Similarity=0.385 Sum_probs=203.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCC----EEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCG----TFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
.++|.+.+.||+|+||.||+|.+.+.. .||+|.+..... ...+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 467888999999999999999865322 499999875432 234678999999999999999999999865 45789
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++++|.+++..... .+++..++.++.|+++||.|||++ +++||||||+||+++.++.+||+|||++...
T Consensus 90 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEecCCCCCHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 9999999999999976432 388999999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
............+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ... ......
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~---~~~---~~~~~~------- 230 (281)
T 3cc6_A 164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK---DVI---GVLEKG------- 230 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG---GHH---HHHHHT-------
T ss_pred ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH---HHH---HHHhcC-------
Confidence 5544333444567889999999998899999999999999999998 99998643211 111 111111
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.....+...+..+.+++.+||+.+|++|||++|+++.|++..
T Consensus 231 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 231 --DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 111122234567999999999999999999999999998753
No 90
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-41 Score=352.75 Aligned_cols=266 Identities=28% Similarity=0.444 Sum_probs=198.8
Q ss_pred CCCCCCeeeecCCeEEEEEEECC--CC--EEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeec-CCccEEE
Q 007455 312 ALDEEDVVGSGGFGTVYRMVMND--CG--TFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRL-PATKLLI 385 (603)
Q Consensus 312 ~~~~~~~ig~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv 385 (603)
.|++.+.||+|+||.||+|.+.+ +. .+|+|.+..... ...+.+.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 35567899999999999998743 22 489998865433 344678999999999999999999998754 5678999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++|+|.+++..... .+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCTTC---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 999999999999976432 378899999999999999999999 89999999999999999999999999998664
Q ss_pred CCCcc---eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchh
Q 007455 466 DEEAH---VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541 (603)
Q Consensus 466 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (603)
..... ......+++.|+|||++.+..++.++||||||+++|||++ |..||..... ..... .....
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~---~~~~~---~~~~~----- 312 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITV---YLLQG----- 312 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS---SCHHH---HHHTT-----
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH---HHHHH---HHHcC-----
Confidence 43221 1233457789999999999999999999999999999999 5666654321 11111 11111
Q ss_pred hhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCCCCcccccc
Q 007455 542 VIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPSDFYES 598 (603)
Q Consensus 542 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~~~~~ 598 (603)
.....+...+..+.+++.+||+.+|++|||++|+++.|+++......+.|...
T Consensus 313 ----~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~~~~ 365 (373)
T 3c1x_A 313 ----RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHV 365 (373)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCBCCC
T ss_pred ----CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccceeec
Confidence 11112234456799999999999999999999999999987755555544433
No 91
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.1e-42 Score=361.82 Aligned_cols=253 Identities=21% Similarity=0.293 Sum_probs=205.2
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCC---CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
..++|++.+.||+|+||.||+|.+.. +..||+|++.+. .....+.+.+|+.+++.++||||+++++++.++...|+
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 146 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 146 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 45789999999999999999999875 456999998542 11222347899999999999999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++.... +++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 147 V~E~~~gg~L~~~l~~~~-----~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 147 VMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp EECCCTTEEHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeCCCCCcHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 999999999999987532 88999999999999999999999 8999999999999999999999999999877
Q ss_pred CCCCcceeecccccccccCccccccCC----CCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcch
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGR----ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLE 540 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (603)
............||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... ......+.....
T Consensus 219 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~-- 290 (410)
T 3v8s_A 219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMNHKN-- 290 (410)
T ss_dssp CTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHHH--
T ss_pred ccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh------hhHHHHHHhccc--
Confidence 655444445678999999999997655 78899999999999999999999975321 111111111100
Q ss_pred hhhcccCCCcCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 007455 541 DVIDKRCADADMETVEAILEIAARCTDANPDD--RPSMNQVLQ 581 (603)
Q Consensus 541 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--RPs~~evl~ 581 (603)
....+ .....+.++.+|+.+||..+|.+ ||+++|+++
T Consensus 291 ---~~~~p-~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 291 ---SLTFP-DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp ---HCCCC-TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred ---cccCC-CcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 00011 11134567999999999999988 999999996
No 92
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4e-41 Score=334.56 Aligned_cols=252 Identities=23% Similarity=0.328 Sum_probs=204.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecC--CccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLP--ATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+. +..+|||++...... ..+.+.+|+.++++++||||+++++++... ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 467888999999999999999986 578999999765432 345689999999999999999999999877 778999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK--IIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
|||+++|+|.+++..... ..+++..++.++.|++.||+|||++ + ++||||||+||+++.++.++|+|||++..
T Consensus 88 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTN--FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EECCTTCBHHHHHHSCSS--CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred ecccCCCcHHHHHhhccc--CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999999999999986432 3489999999999999999999998 7 99999999999999999999999998765
Q ss_pred cCCCCcceeecccccccccCccccccCCCCc---ccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcch
Q 007455 464 LVDEEAHVTTVVAGTFGYLAPEYLQSGRATE---KSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLE 540 (603)
Q Consensus 464 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (603)
... ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||..... ..........
T Consensus 163 ~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~---- 226 (271)
T 3kmu_A 163 FQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIGMKVALE---- 226 (271)
T ss_dssp TSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHHHHHHHS----
T ss_pred ecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHHHHHHhc----
Confidence 332 2245899999999998665544 79999999999999999999964321 1111111111
Q ss_pred hhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 541 DVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 541 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
...+..+...+.++.+++.+||+.||++|||++|+++.|+++.
T Consensus 227 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 227 ----GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp ----CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ----CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1111223345567999999999999999999999999998753
No 93
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.6e-42 Score=349.58 Aligned_cols=256 Identities=27% Similarity=0.428 Sum_probs=202.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCC-----EEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~-----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
++|++.+.||+|+||.||+|.+..++ .||+|.+.... ......+.+|+.++++++||||+++++++. ....++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 56788899999999999999986544 27888875432 223345778999999999999999999886 466899
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+.+|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSSG---GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHcc---ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 999999999999997642 2388899999999999999999999 8999999999999999999999999999877
Q ss_pred CCCCcc-eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 465 VDEEAH-VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 465 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
...... ......|+..|+|||++.+..++.++||||||+++|||++ |+.||...... ... .. ....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~---~~-~~~~----- 233 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA---EVP---DL-LEKG----- 233 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT---HHH---HH-HHTT-----
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH---HHH---HH-HHcC-----
Confidence 544322 2344567889999999998899999999999999999999 99999753211 111 11 1111
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhccc
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 588 (603)
.....+...+.++.+++.+||+.+|++|||++|+++.|+++..
T Consensus 234 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 234 ---ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ---CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ---CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0111122234568899999999999999999999999988653
No 94
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.6e-41 Score=337.11 Aligned_cols=246 Identities=22% Similarity=0.353 Sum_probs=181.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC---CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR---EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+. ++..||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 468999999999999999999976 45679999986542 23345789999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+ +++|.+++..... +++..++.++.|++.||.|||++ +++||||||+||++++++.+||+|||++....
T Consensus 92 ~e~~-~~~l~~~~~~~~~----~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EECC-CEEHHHHHHTSSS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred ehhc-CCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceecc
Confidence 9999 5688887766433 89999999999999999999999 89999999999999999999999999998664
Q ss_pred CCCcceeecccccccccCccccccCCC-CcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRA-TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
.... .....||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||..... .........
T Consensus 164 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~--------- 226 (275)
T 2eue_A 164 DGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------PVLFKNISN--------- 226 (275)
T ss_dssp -------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH---------
T ss_pred Cccc--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh---------
Confidence 4322 234568999999999987665 6899999999999999999999975321 111111111
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.....+...+..+.+++.+||+.||++|||++|+++
T Consensus 227 -~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 227 -GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -CCCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 111222334567999999999999999999999985
No 95
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.2e-41 Score=338.92 Aligned_cols=258 Identities=29% Similarity=0.456 Sum_probs=201.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCC----EEEEEEeCCCCCC-hHHHHHHHHHHHhhCCCCeeeecceee-ecCCccEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCG----TFAVKRIDRSREG-SDQVFERELEILGSIKHINLVNLRGYC-RLPATKLL 384 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l 384 (603)
.+|++.+.||+|+||.||+|.+.++. .+|+|.+...... ..+.+.+|+.++++++||||+++++++ ..++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 45777899999999999999975432 4899988754332 345688999999999999999999986 45567899
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++..
T Consensus 105 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEECCTTCBHHHHHHCTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEeCCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence 999999999999997533 2378999999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCc---ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCC-CCCcccccCCccHhHHHHHHhhhCcch
Q 007455 465 VDEEA---HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKR-PTDPTFVKRGLNVVGWMNTLLKENRLE 540 (603)
Q Consensus 465 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (603)
..... .......+|+.|+|||.+.+..++.++||||+|+++|||++|.. ||..... ... ......
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~---~~~---~~~~~~----- 247 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDI---TVYLLQ----- 247 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT---TTH---HHHHHT-----
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH---HHH---HHHHhc-----
Confidence 54322 12234557789999999998899999999999999999999554 5443211 111 111111
Q ss_pred hhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 541 DVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 541 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
......+...+..+.+++.+||+.+|++|||++|+++.|+++...
T Consensus 248 ----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 248 ----GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp ----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ----CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111112233456799999999999999999999999999986543
No 96
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5.1e-41 Score=335.27 Aligned_cols=246 Identities=22% Similarity=0.271 Sum_probs=204.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCC-EEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
.++|++.+.||+|+||.||+|.+..++ .+|+|++........+.+.+|++++++++||||+++++++......++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 457888999999999999999987644 6999999776556677899999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE---CCCCCeEEeecccccccC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~~~~~~ 465 (603)
+++++|.+++..... +++..++.++.|++.||+|||++ +++||||||+||++ +.++.++|+|||++....
T Consensus 88 ~~~~~L~~~~~~~~~----~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 88 CTGGELFERVVHKRV----FRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp CCSCBHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 999999998876543 89999999999999999999999 89999999999999 788999999999998765
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.... .....||+.|+|||.+.+ .++.++||||+|+++|||++|+.||..... ......... .
T Consensus 161 ~~~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~-~-------- 222 (277)
T 3f3z_A 161 PGKM--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTD------SEVMLKIRE-G-------- 222 (277)
T ss_dssp TTSC--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH-C--------
T ss_pred Cccc--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHh-C--------
Confidence 4332 234568999999999875 489999999999999999999999965321 111111111 1
Q ss_pred cCCCcCH----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 546 RCADADM----ETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~----~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
....+. ..+..+.+++.+||+.||++|||+.|+++
T Consensus 223 -~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 223 -TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -CCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111 23567999999999999999999999985
No 97
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.9e-41 Score=339.30 Aligned_cols=258 Identities=29% Similarity=0.466 Sum_probs=196.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
++|++.+.||+|+||.||+|.+.+ .+|+|+++..... ..+.+.+|++++++++||||+++++++ .....++||||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 578899999999999999998754 6999999755433 235689999999999999999999965 55678999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 101 ~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 101 CEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp CCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred cCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccccc
Confidence 99999999986543 2389999999999999999999999 89999999999999999999999999997654321
Q ss_pred -cceeecccccccccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 469 -AHVTTVVAGTFGYLAPEYLQ---SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 469 -~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
........||+.|+|||.+. +..++.++||||+|+++|||++|+.||..... . ............ .
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~-~~~~~~~~~~~~----~ 244 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-----R-DQIIEMVGRGSL----S 244 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-----H-HHHHHHHHHTSC----C
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch-----H-HHHHHHhccccc----C
Confidence 22233456899999999986 56788899999999999999999999965321 1 111111111111 1
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
..........+.++.+++.+||+.+|++|||++|+++.|+++.
T Consensus 245 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 245 PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 1112223345578999999999999999999999999999865
No 98
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.4e-41 Score=342.20 Aligned_cols=262 Identities=22% Similarity=0.301 Sum_probs=200.2
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC---hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG---SDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
..++|++.+.||+|+||.||+|.+.. +..||+|.+...... ..+.+.+|+.++++++||||+++++++...+..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 46789999999999999999999874 556999998654322 23568899999999999999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++++|.+++..... +++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 112 v~e~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQGP----LAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEECCCCEEHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEEecCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 9999999999999986543 89999999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
............|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ...........
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~----- 252 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------VMGAHINQAIP----- 252 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------HHHHHHHSCCC-----
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------HHHHHhccCCC-----
Confidence 554333344566899999999999889999999999999999999999999753211 11111111100
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHhhcccCC
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRP-SMNQVLQLLEQEVMSP 590 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-s~~evl~~L~~~~~~~ 590 (603)
.....+...+.++.+++.+||+.||++|| +++++++.|++.....
T Consensus 253 -~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 253 -RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp -CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred -CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 00011223445799999999999999999 9999999999865443
No 99
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.9e-41 Score=337.59 Aligned_cols=258 Identities=21% Similarity=0.346 Sum_probs=199.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCC--ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSRE--GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
++|++.+.||+|+||+||+|.+.. +..||+|++..... .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 578889999999999999999875 56799999965432 334678899999999999999999999999999999999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCC
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE 467 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~ 467 (603)
|+++ ++.+.+.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9987 5555554422 2389999999999999999999999 8999999999999999999999999999876433
Q ss_pred CcceeecccccccccCccccccCC-CCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhh---hC---cch
Q 007455 468 EAHVTTVVAGTFGYLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLK---EN---RLE 540 (603)
Q Consensus 468 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~---~~~ 540 (603)
.. ......||+.|+|||++.+.. ++.++||||+|+++|||++|+.||.... ........... .. .+.
T Consensus 155 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~-----~~~~~~~~i~~~~~~~~~~~~~ 228 (292)
T 3o0g_A 155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWP 228 (292)
T ss_dssp CS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-----SHHHHHHHHHHHHCCCCTTTCT
T ss_pred cc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC-----CHHHHHHHHHHHhCCCChhhhh
Confidence 22 234456899999999987665 7999999999999999999998864321 11111111111 00 000
Q ss_pred hhh-------------cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 541 DVI-------------DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 541 ~~~-------------~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
... ...........+.++.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000 00001112234567899999999999999999999986
No 100
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=343.24 Aligned_cols=265 Identities=24% Similarity=0.329 Sum_probs=207.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeee----cCCccEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR----LPATKLLI 385 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~lv 385 (603)
++|++.+.||+|+||.||+|.+. ++..||||++........+.+.+|+++++.++||||+++++++. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 57888999999999999999985 56679999986655555677899999999999999999999986 33467899
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++|+|.+++.........+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 999999999999987444445589999999999999999999999 89999999999999999999999999987653
Q ss_pred CCCcc--------eeecccccccccCccccccCC---CCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHh
Q 007455 466 DEEAH--------VTTVVAGTFGYLAPEYLQSGR---ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLL 534 (603)
Q Consensus 466 ~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 534 (603)
..... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||........ .... ..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~----~~ 260 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVAL----AV 260 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHH----HH
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhH----Hh
Confidence 21110 012245789999999987543 68899999999999999999999864221111 1100 00
Q ss_pred hhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCCC
Q 007455 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPC 591 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 591 (603)
.. ..........+.++.+++.+||+.||.+|||++++++.|+.+..++.
T Consensus 261 ~~--------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 261 QN--------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp HC--------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred hc--------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 00 00011122345679999999999999999999999999998764443
No 101
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.4e-41 Score=347.19 Aligned_cols=261 Identities=28% Similarity=0.421 Sum_probs=210.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC--------CCCEEEEEEeCCCCC-ChHHHHHHHHHHHhhC-CCCeeeecceeeecC
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN--------DCGTFAVKRIDRSRE-GSDQVFERELEILGSI-KHINLVNLRGYCRLP 379 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 379 (603)
.++|++.+.||+|+||.||+|.+. ++..||+|++..... ...+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 367888999999999999999974 345699999875432 2345688999999999 899999999999999
Q ss_pred CccEEEEEecCCCCccccccccCCC------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE
Q 007455 380 ATKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL 447 (603)
Q Consensus 380 ~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 447 (603)
+..++||||+++|+|.+++...... ...+++..++.++.|+++||.|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 9999999999999999999865421 23488999999999999999999999 89999999999999
Q ss_pred CCCCCeEEeecccccccCCCCcc-eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCcc
Q 007455 448 DENLEPHVSDFGLAKLLVDEEAH-VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLN 525 (603)
Q Consensus 448 ~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~ 525 (603)
+.++.+||+|||+++........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------ 264 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------ 264 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC------
Confidence 99999999999999876543322 2233457789999999988889999999999999999999 999986432
Q ss_pred HhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhccc
Q 007455 526 VVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588 (603)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 588 (603)
........... .....+...+.++.+++.+||+.+|.+|||++|+++.|+++..
T Consensus 265 ~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 265 VEELFKLLKEG---------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp HHHHHHHHHHT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC---------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11111111111 1111223445679999999999999999999999999998654
No 102
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.2e-41 Score=336.50 Aligned_cols=265 Identities=24% Similarity=0.384 Sum_probs=212.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCC-EEEEEEeCCC---CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+..++ .||+|.+... .......+.+|+++++.++||||+++++++...+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467888999999999999999987544 6999998543 223346789999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++|+|.+++..... +++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 93 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGR----FDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp ECCCTTEEHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEeCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 999999999999987543 89999999999999999999998 89999999999999999999999999987654
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
... .....|++.|+|||++.+..++.++||||+|+++|||++|+.||..... .........
T Consensus 166 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~---------- 226 (284)
T 2vgo_A 166 SLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH------TETHRRIVN---------- 226 (284)
T ss_dssp SSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHT----------
T ss_pred ccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH------hHHHHHHhc----------
Confidence 322 2345689999999999988899999999999999999999999975321 111111111
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcccCCCCcccccccC
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ--LLEQEVMSPCPSDFYESHS 600 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~--~L~~~~~~~~~~~~~~~~~ 600 (603)
.....+...+.++.+++.+||+.+|.+|||++|+++ .+.+......|+.+...++
T Consensus 227 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~~~p~~~~~~~~ 283 (284)
T 2vgo_A 227 VDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQS 283 (284)
T ss_dssp TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCCCCCCCC-----
T ss_pred cccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhccccCCCccccCCC
Confidence 011122334567999999999999999999999996 6666555555555555443
No 103
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=6.3e-41 Score=336.41 Aligned_cols=252 Identities=27% Similarity=0.521 Sum_probs=201.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChH-------HHHHHHHHHHhhCCCCeeeecceeeecCCcc
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSD-------QVFERELEILGSIKHINLVNLRGYCRLPATK 382 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-------~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 382 (603)
++|++.+.||+|+||.||+|.+. ++..||+|++........ +.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 57888899999999999999986 556799999865432221 56899999999999999999999986554
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEecCCCCCeEECCCCC-----eEE
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK--IIHRDIKSSNILLDENLE-----PHV 455 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~-----~kl 455 (603)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ + ++||||||+||+++.++. +||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred eEEEEecCCCCHHHHHhccc---CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 79999999999998886543 2489999999999999999999998 7 999999999999988876 999
Q ss_pred eecccccccCCCCcceeecccccccccCcccc--ccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHH
Q 007455 456 SDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL--QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTL 533 (603)
Q Consensus 456 ~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 533 (603)
+|||+++.... ......||+.|+|||++ ....++.++||||+|+++|||++|+.||..... ....+....
T Consensus 171 ~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~ 242 (287)
T 4f0f_A 171 ADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY----GKIKFINMI 242 (287)
T ss_dssp CCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC----CHHHHHHHH
T ss_pred CCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc----cHHHHHHHH
Confidence 99999975433 23445689999999998 345578899999999999999999999975321 111111111
Q ss_pred hhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 007455 534 LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQE 586 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~ 586 (603)
.. .. .....+...+.++.+++.+||+.||++|||++|+++.|+++
T Consensus 243 ~~-~~-------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 RE-EG-------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HH-SC-------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred hc-cC-------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11 11 11112334456899999999999999999999999999863
No 104
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3e-41 Score=342.99 Aligned_cols=261 Identities=29% Similarity=0.470 Sum_probs=210.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC------CCCEEEEEEeCCCCCC-hHHHHHHHHHHHhhC-CCCeeeecceeeecCCc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN------DCGTFAVKRIDRSREG-SDQVFERELEILGSI-KHINLVNLRGYCRLPAT 381 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 381 (603)
.++|++.+.||+|+||.||+|.+. .+..||+|.+...... ..+.+.+|+.+++++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 357888999999999999999862 3346999999755432 346789999999999 89999999999999999
Q ss_pred cEEEEEecCCCCccccccccCCC--------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE
Q 007455 382 KLLIYDYLSMGSLDDFLHEHGEG--------------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL 447 (603)
Q Consensus 382 ~~lv~e~~~~gsL~~~l~~~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 447 (603)
.++||||+++|+|.+++...... ...+++..++.++.|+++||.|||++ +++||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 99999999999999999865421 23489999999999999999999999 89999999999999
Q ss_pred CCCCCeEEeecccccccCCCCcc-eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCcc
Q 007455 448 DENLEPHVSDFGLAKLLVDEEAH-VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLN 525 (603)
Q Consensus 448 ~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~ 525 (603)
+.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---- 254 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---- 254 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS----
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch----
Confidence 99999999999999876554332 2234557889999999988899999999999999999999 99998653211
Q ss_pred HhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 526 VVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
........... ....+...+.++.+++.+||+.||.+|||++|+++.|++..
T Consensus 255 --~~~~~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 255 --SKFYKMIKEGF--------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp --HHHHHHHHHTC--------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --hHHHHHhccCC--------CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 01111111110 01112334567999999999999999999999999998865
No 105
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=340.96 Aligned_cols=254 Identities=28% Similarity=0.458 Sum_probs=197.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEecC
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLS 390 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 390 (603)
++|++.+.||+|+||.||+|.+. ++.||+|.+... ...+.+.+|++++++++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 56788899999999999999986 478999998643 34567899999999999999999999886 45899999999
Q ss_pred CCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC-eEEeecccccccCCCCc
Q 007455 391 MGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE-PHVSDFGLAKLLVDEEA 469 (603)
Q Consensus 391 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~DfG~~~~~~~~~~ 469 (603)
+|+|.+++..... ...+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 9999999986532 233788999999999999999999932228999999999999998887 799999999765332
Q ss_pred ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCC
Q 007455 470 HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD 549 (603)
Q Consensus 470 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (603)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ............ ..+.
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~---------~~~~ 224 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG----PAFRIMWAVHNG---------TRPP 224 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS----SHHHHHHHHHTT---------CCCC
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc----cHHHHHHHHhcC---------CCCC
Confidence 2234589999999999988999999999999999999999999964311 111111111110 1111
Q ss_pred cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 550 ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 550 ~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.....+..+.+++.+||+.+|++|||++|+++.|++..
T Consensus 225 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 22234567999999999999999999999999998754
No 106
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6e-42 Score=350.64 Aligned_cols=271 Identities=28% Similarity=0.402 Sum_probs=209.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEE-----CCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeee--cCCccE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVM-----NDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR--LPATKL 383 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 383 (603)
++|++.+.||+|+||.||+|.+ ..+..||||++........+.+.+|++++++++||||+++++++. .....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5788899999999999999984 245569999997765555667999999999999999999999886 445688
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
+||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 103 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEeecCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccccee
Confidence 99999999999999976432 389999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCcc--eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchh
Q 007455 464 LVDEEAH--VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541 (603)
Q Consensus 464 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (603)
....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .....+...........+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF-LRMMGCERDVPALSRLLE 255 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-HHHCC----CCHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh-hhhcccccccccHHHHHH
Confidence 6543322 2233457888999999998889999999999999999999999986432100 000000000000000011
Q ss_pred hh-cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhccc
Q 007455 542 VI-DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588 (603)
Q Consensus 542 ~~-~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 588 (603)
.+ .......+...+.++.+++.+||+.||++|||++|+++.|+....
T Consensus 256 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 256 LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred HhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11 111122334556789999999999999999999999999998653
No 107
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-41 Score=344.56 Aligned_cols=257 Identities=25% Similarity=0.414 Sum_probs=200.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCC-----EEEEEEeCCC-CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDRS-REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~-----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
++|++.+.||+|+||.||+|.+..++ +|++|.+... .....+.+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 57888999999999999999986443 3688877543 3345677999999999999999999999998754 789
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
|+||+.+|+|.+++..... .+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 94 v~~~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EECCCSSCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred EEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 9999999999999986432 389999999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCcc-eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 465 VDEEAH-VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 465 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
...... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .. ... ...
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~---~~~-~~~------ 234 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---EI---SSI-LEK------ 234 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GH---HHH-HHT------
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HH---HHH-HHc------
Confidence 543222 2233456788999999999999999999999999999999 99999754221 11 111 111
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
......+...+.++.+++.+||+.||++|||++|+++.|+++...
T Consensus 235 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 235 --GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp --TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred --CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 111122334556799999999999999999999999999987643
No 108
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.4e-41 Score=360.28 Aligned_cols=251 Identities=23% Similarity=0.402 Sum_probs=206.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC---CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR---EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
..+|.+.+.||+|+||.||+|.+. .+..||||++.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357888999999999999999987 56679999986432 22345689999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++|+|.+++...+. +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 95 ~E~~~gg~L~~~l~~~~~----l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 95 MEYVSGGELFDYICKNGR----LDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EECCSSEEHHHHTTSSSS----CCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EeCCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 999999999999976443 89999999999999999999999 89999999999999999999999999998765
Q ss_pred CCCcceeecccccccccCccccccCCC-CcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRA-TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
... ......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||..... .........
T Consensus 168 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~--------- 230 (476)
T 2y94_A 168 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV------PTLFKKICD--------- 230 (476)
T ss_dssp TTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS------HHHHHHHHT---------
T ss_pred ccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH------HHHHHHHhc---------
Confidence 433 2334579999999999987765 6899999999999999999999975321 111111111
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhh
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ--LLEQ 585 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~--~L~~ 585 (603)
.....+...+.++.+++.+||+.||++|||++|+++ .+.+
T Consensus 231 -~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~ 272 (476)
T 2y94_A 231 -GIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272 (476)
T ss_dssp -TCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred -CCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence 111122334567999999999999999999999996 4544
No 109
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.8e-41 Score=337.56 Aligned_cols=246 Identities=28% Similarity=0.449 Sum_probs=201.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCC-EEEEEEeCCCC---CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSR---EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
+++|++.+.||+|+||.||+|.+..++ .||+|++.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 567889999999999999999987654 69999985422 22345688999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++|+|.+++..... +++..++.++.|++.||.|||+. +++||||||+||+++.++.++|+|||++....
T Consensus 88 ~e~~~~~~l~~~l~~~~~----~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSK----FDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp ECCCTTEEHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EecCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 999999999999986543 89999999999999999999998 89999999999999999999999999986543
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
... .....|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ........ .
T Consensus 161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~----------~ 221 (279)
T 3fdn_A 161 SSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY------QETYKRIS----------R 221 (279)
T ss_dssp ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHH----------H
T ss_pred ccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH------HHHHHHHH----------h
Confidence 322 2345689999999999988999999999999999999999999975321 11111111 1
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.....+...+..+.+++.+||+.+|++|||++|+++
T Consensus 222 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 222 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111122334567899999999999999999999996
No 110
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.3e-41 Score=351.58 Aligned_cols=266 Identities=18% Similarity=0.246 Sum_probs=203.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCC------CEEEEEEeCCCCCChH-----------HHHHHHHHHHhhCCCCeeeec
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDC------GTFAVKRIDRSREGSD-----------QVFERELEILGSIKHINLVNL 372 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~------~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l 372 (603)
.++|++.+.||+|+||.||+|.+..+ ..||||++........ ..+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 35788899999999999999998764 4699999865432111 123345666777889999999
Q ss_pred ceeeecC----CccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEEC
Q 007455 373 RGYCRLP----ATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD 448 (603)
Q Consensus 373 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 448 (603)
++++... ...++||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 9998764 4479999999 999999998642 2389999999999999999999999 899999999999999
Q ss_pred --CCCCeEEeecccccccCCCCcce------eecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccc
Q 007455 449 --ENLEPHVSDFGLAKLLVDEEAHV------TTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFV 520 (603)
Q Consensus 449 --~~~~~kl~DfG~~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~ 520 (603)
.++.+||+|||+++.+....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 88999999999998765432211 1334599999999999998999999999999999999999999975321
Q ss_pred cCCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 521 KRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
. .....+..... ...+...++..... ...+.++.+++..||+.+|++||+++++++.|++..
T Consensus 267 ~--~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 267 D--PKYVRDSKIRY-RENIASLMDKCFPA--ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp C--HHHHHHHHHHH-HHCHHHHHHHHSCT--TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHh-hhhHHHHHHHhccc--ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 1 11121222111 11233333322211 123467999999999999999999999999988754
No 111
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.6e-41 Score=346.66 Aligned_cols=262 Identities=23% Similarity=0.257 Sum_probs=202.1
Q ss_pred HHHHHhhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCC-----CCChHHHHHHHHHHHhhCCCCeeeecceeeec
Q 007455 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRS-----REGSDQVFERELEILGSIKHINLVNLRGYCRL 378 (603)
Q Consensus 305 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 378 (603)
++.+..++|++.+.||+|+||.||+|.+.. +..||+|++... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 455667889999999999999999999864 456999988543 23445679999999999999999999999999
Q ss_pred CCccEEEEEecCCCCccccccccCCC------------------------------------CccCCHHHHHHHHHHHHH
Q 007455 379 PATKLLIYDYLSMGSLDDFLHEHGEG------------------------------------QQLLNWSARLKIALGSAR 422 (603)
Q Consensus 379 ~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~i~~ 422 (603)
.+..++||||+++|+|.+++...... ...+++..++.++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998631110 112457778899999999
Q ss_pred HHHHHHhCCCCCeEEecCCCCCeEECCCC--CeEEeecccccccCCCCc---ceeecccccccccCcccccc--CCCCcc
Q 007455 423 GLAYLHHDCCPKIIHRDIKSSNILLDENL--EPHVSDFGLAKLLVDEEA---HVTTVVAGTFGYLAPEYLQS--GRATEK 495 (603)
Q Consensus 423 ~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~DfG~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~ 495 (603)
||+|||+. +|+||||||+||+++.++ .+||+|||+++.+..... .......||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999999 899999999999998776 899999999986643221 12345669999999999865 678899
Q ss_pred cchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCC
Q 007455 496 SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPS 575 (603)
Q Consensus 496 ~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs 575 (603)
+||||||+++|||++|+.||..... .............. ........+.++.+++.+||+.+|++|||
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVND------ADTISQVLNKKLCF------ENPNYNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCT------TSGGGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCh------HHHHHHHHhccccc------CCcccccCCHHHHHHHHHHcCCChhHCCC
Confidence 9999999999999999999965321 11111111111000 00011124567999999999999999999
Q ss_pred HHHHHH
Q 007455 576 MNQVLQ 581 (603)
Q Consensus 576 ~~evl~ 581 (603)
+.|+++
T Consensus 325 ~~~~l~ 330 (345)
T 3hko_A 325 AMRALQ 330 (345)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999987
No 112
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.4e-41 Score=362.83 Aligned_cols=248 Identities=20% Similarity=0.274 Sum_probs=195.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCC---CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+.. +..||||++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 4678899999999999999999874 557999998642 223334578899999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH-DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
|||+++|+|.+++..... +++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERV----FSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999999976543 8999999999999999999998 6 8999999999999999999999999999864
Q ss_pred CCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... .........
T Consensus 300 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~--------- 363 (446)
T 4ejn_A 300 IKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILM--------- 363 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH---------
T ss_pred cCCC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHHHHHh---------
Confidence 3322 223446799999999999999999999999999999999999999965321 111111111
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRP-----SMNQVLQ 581 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~evl~ 581 (603)
.....+...+.++.+++.+||+.||++|| +++|+++
T Consensus 364 -~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 364 -EEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -CCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11112334456799999999999999999 9999985
No 113
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-41 Score=344.46 Aligned_cols=257 Identities=27% Similarity=0.460 Sum_probs=200.5
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCC-----EEEEEEeCCCCCC-hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCG-----TFAVKRIDRSREG-SDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~-----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
++|+..+.||+|+||.||+|.+..+. .||+|.+...... ....+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 45667789999999999999876432 4999999754332 34568899999999999999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 124 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKD---GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEECCTTEEHHHHHHHTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 999999999999997642 2389999999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCcc--eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchh
Q 007455 465 VDEEAH--VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541 (603)
Q Consensus 465 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (603)
...... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ..........
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~~~~~~~----- 266 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN------HEVMKAINDG----- 266 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTT-----
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHHCC-----
Confidence 543221 1223346788999999998899999999999999999999 9999864321 1111111111
Q ss_pred hhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhccc
Q 007455 542 VIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588 (603)
Q Consensus 542 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 588 (603)
.....+...+..+.+++.+||+.+|++||+++++++.|++...
T Consensus 267 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 267 ----FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp ----CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ----CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111233455679999999999999999999999999987653
No 114
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-41 Score=338.05 Aligned_cols=257 Identities=24% Similarity=0.365 Sum_probs=206.3
Q ss_pred hCCCCCC-eeeecCCeEEEEEEEC---CCCEEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 311 EALDEED-VVGSGGFGTVYRMVMN---DCGTFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 311 ~~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
++|.+.+ .||+|+||.||+|.+. .+..||+|.++.... ...+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4555555 8999999999999864 445699999976533 2346689999999999999999999999 45678999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++++|.+++.... ..+++..++.++.|+++||.|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHhCC---ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 99999999999987532 2389999999999999999999999 89999999999999999999999999998775
Q ss_pred CCCcce--eecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 466 DEEAHV--TTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 466 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
...... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... . .........
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~---~~~~~i~~~------ 229 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG---P---EVMAFIEQG------ 229 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT---H---HHHHHHHTT------
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH---H---HHHHHHhcC------
Confidence 443322 223446789999999988889999999999999999998 9999865321 1 111111111
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
.....+...+.++.+++.+||+.+|++||++.++++.|++....
T Consensus 230 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 230 ---KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11122334567899999999999999999999999999886533
No 115
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.4e-41 Score=347.14 Aligned_cols=250 Identities=23% Similarity=0.339 Sum_probs=188.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
.+.|++.+.||+|+||.||+|.+.+ +..||||++.... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 3568888999999999999999985 4579999987543 345688999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC---CCCeEEeecccccccC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE---NLEPHVSDFGLAKLLV 465 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG~~~~~~ 465 (603)
+++|+|.+++..... +++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 130 ~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 130 VTGGELFDRIVEKGY----YSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp CCSCBHHHHHTTCSS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred CCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 999999999876433 89999999999999999999999 8999999999999975 8899999999998664
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ......... ....
T Consensus 203 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~i~~-~~~~----- 269 (349)
T 2w4o_A 203 HQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-----QFMFRRILN-CEYY----- 269 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-----HHHHHHHHT-TCCC-----
T ss_pred ccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-----HHHHHHHHh-CCCc-----
Confidence 322 223456899999999999889999999999999999999999998643211 001111111 1000
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.........+.++.+++.+||+.||++|||+.|+++
T Consensus 270 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 270 FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001111234567999999999999999999999987
No 116
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.6e-41 Score=342.46 Aligned_cols=264 Identities=23% Similarity=0.350 Sum_probs=189.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
.++|++.+.||+|+||.||+|.+.. +..||+|.+.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 4678999999999999999999874 5679999986543 2334678899999999999999999999999999999999
Q ss_pred ecCCCCccccccccC--CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 388 YLSMGSLDDFLHEHG--EGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|++ |+|.+++.... .....+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 49999887542 2223488999999999999999999999 89999999999999999999999999998764
Q ss_pred CCCcceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhh---Ccchh
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE---NRLED 541 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 541 (603)
.... ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... .....+...... ..+..
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~ 235 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE---EQLKLIFDIMGTPNESLWPS 235 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCSCCTTTCGG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCChhHhhh
Confidence 3322 2234568999999999876 46899999999999999999999999754211 111111111000 00000
Q ss_pred h---------hcccCC---------CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 542 V---------IDKRCA---------DADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 542 ~---------~~~~~~---------~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. +..... ......+.++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 000000 001123467999999999999999999999986
No 117
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3e-41 Score=344.00 Aligned_cols=266 Identities=26% Similarity=0.440 Sum_probs=205.7
Q ss_pred CCCCCeeeecCCeEEEEEEEC-----CCCEEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeecC--CccEE
Q 007455 313 LDEEDVVGSGGFGTVYRMVMN-----DCGTFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRLP--ATKLL 384 (603)
Q Consensus 313 ~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 384 (603)
|++.+.||+|+||.||++.+. .+..||||++..... ...+.+.+|++++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999988653 445699999976533 2345689999999999999999999999874 56789
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++.... +++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 113 v~e~~~~~~L~~~l~~~~-----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhhCC-----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 999999999999997643 89999999999999999999999 8999999999999999999999999999877
Q ss_pred CCCCcc--eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 465 VDEEAH--VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 465 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
...... ......++..|+|||++.+..++.++||||+|+++|||++|+.||....... .....+.........+.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-HHHHCSCCHHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh-hhhhcccccchhHHHHHHH
Confidence 554322 2234557888999999998889999999999999999999999986432100 0000000000000011111
Q ss_pred hccc-CCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 543 IDKR-CADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 543 ~~~~-~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
+... ....+...+.++.+++.+||+.||++|||++|+++.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 264 LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 1111 12233455678999999999999999999999999998753
No 118
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=7.9e-41 Score=339.82 Aligned_cols=256 Identities=23% Similarity=0.368 Sum_probs=195.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCCh---HHHHHHHHHHHhhCCCCeeeecceeeecCCcc----
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS---DQVFERELEILGSIKHINLVNLRGYCRLPATK---- 382 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 382 (603)
++|++.+.||+|+||.||+|.+. ++..||||++....... ...+.+|+.++++++||||+++++++......
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 57888999999999999999985 45569999997653332 34688999999999999999999998766554
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
++||||+++|+|.+++...+. +++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred EEEEecCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 999999999999999986543 89999999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCCc--ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcch
Q 007455 463 LLVDEEA--HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLE 540 (603)
Q Consensus 463 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (603)
....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ..............
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~ 238 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDPIP 238 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCCCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCCCCC
Confidence 7654322 122345689999999999988999999999999999999999999975321 11111111111110
Q ss_pred hhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHH-HHHhh
Q 007455 541 DVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVL-QLLEQ 585 (603)
Q Consensus 541 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl-~~L~~ 585 (603)
.. ......+.++.+++.+||+.||++||++.+++ +.+..
T Consensus 239 ~~------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 239 PS------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp HH------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred cc------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 00 00112456799999999999999999766555 45554
No 119
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.2e-41 Score=340.41 Aligned_cols=262 Identities=23% Similarity=0.286 Sum_probs=197.8
Q ss_pred hCCCCC-CeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccEEEEE
Q 007455 311 EALDEE-DVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 311 ~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 387 (603)
+.|++. +.||+|+||.||+|.+. ++..||||++..........+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 456664 78999999999999976 5567999999776656667899999999985 79999999999999999999999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC---eEEeeccccccc
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE---PHVSDFGLAKLL 464 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfG~~~~~ 464 (603)
|+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++...
T Consensus 92 ~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 92 KMRGGSILSHIHKRRH----FNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp CCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred cCCCCcHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 9999999999987543 89999999999999999999999 8999999999999998776 999999998765
Q ss_pred CCCCc------ceeecccccccccCcccccc-----CCCCcccchHhHHHHHHHHHhCCCCCCcccccCC-ccHhHHHHH
Q 007455 465 VDEEA------HVTTVVAGTFGYLAPEYLQS-----GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRG-LNVVGWMNT 532 (603)
Q Consensus 465 ~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~-~~~~~~~~~ 532 (603)
..... .......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||........ .........
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 42211 11223458999999999864 5678999999999999999999999976432110 000000000
Q ss_pred HhhhCcchhhhcccCCCcCH----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 533 LLKENRLEDVIDKRCADADM----ETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. ...+.+.+.......+. ..+.++.+++.+||+.||++|||++|+++
T Consensus 245 -~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 245 -C-QNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp -H-HHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -H-HHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 0 00000111111111111 23467999999999999999999999987
No 120
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.1e-40 Score=345.77 Aligned_cols=252 Identities=27% Similarity=0.343 Sum_probs=193.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
.++|++.+.||+|+||.||+|.+. .+..||+|++..... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467899999999999999999987 456799999965443 345688999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC--eEEeecccccccCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE--PHVSDFGLAKLLVD 466 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfG~~~~~~~ 466 (603)
+++|+|.+++...+. +++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++....
T Consensus 98 ~~~~~L~~~l~~~~~----~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 98 ASGGELYERICNAGR----FSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred CCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 999999999976543 89999999999999999999998 8999999999999987765 99999999975432
Q ss_pred CCcceeecccccccccCccccccCCCCcc-cchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQSGRATEK-SDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.. ......||+.|+|||++.+..++.+ +||||+|+++|||++|+.||....... ............. .
T Consensus 171 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~-~------ 239 (361)
T 3uc3_A 171 HS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVK-Y------ 239 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTC-C------
T ss_pred cC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCC-C------
Confidence 22 2234569999999999988777655 899999999999999999997543211 1111111111110 0
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..+ .....+.++.+|+.+||..+|++|||++|+++
T Consensus 240 ~~~-~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 240 SIP-DDIRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp CCC-TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCC-CcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 001 11123467899999999999999999999986
No 121
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=355.90 Aligned_cols=255 Identities=22% Similarity=0.279 Sum_probs=204.1
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC---CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR---EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
..++|++.+.||+|+||.||+|.++ .++.||+|++.+.. ....+.+.+|..++..++||||+++++++.+.+..|+
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 3578999999999999999999987 45679999986421 1122347889999999999999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++...+. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 139 VmE~~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~ 212 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKFGE---RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKL 212 (412)
T ss_dssp EECCCCSCBHHHHHHHHSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEcCCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheec
Confidence 9999999999999986432 389999999999999999999998 8999999999999999999999999999877
Q ss_pred CCCCcceeecccccccccCccccc-------cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhC
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQ-------SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 537 (603)
............||+.|+|||++. ...++.++|||||||++|||++|+.||..... ...........
T Consensus 213 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~ 286 (412)
T 2vd5_A 213 RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST------AETYGKIVHYK 286 (412)
T ss_dssp CTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHH
T ss_pred cCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH------HHHHHHHHhcc
Confidence 655444444568999999999987 35689999999999999999999999975321 11111111100
Q ss_pred cchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCC---CCHHHHHH
Q 007455 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDR---PSMNQVLQ 581 (603)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R---Ps~~evl~ 581 (603)
. ....+..+...+.++.+++.+||. +|++| |+++|+++
T Consensus 287 ---~--~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 287 ---E--HLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp ---H--HCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ---c--CcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 0 001111122345689999999999 99998 69999985
No 122
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=349.64 Aligned_cols=247 Identities=22% Similarity=0.288 Sum_probs=196.6
Q ss_pred CCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEecCCCC
Q 007455 315 EEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGS 393 (603)
Q Consensus 315 ~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 393 (603)
..+.||+|+||.||+|.+. ++..||+|++........+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 3568999999999999986 456799999976655556779999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE--CCCCCeEEeecccccccCCCCcce
Q 007455 394 LDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL--DENLEPHVSDFGLAKLLVDEEAHV 471 (603)
Q Consensus 394 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~DfG~~~~~~~~~~~~ 471 (603)
|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 173 L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-- 244 (373)
T 2x4f_A 173 LFDRIIDES---YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-- 244 (373)
T ss_dssp EHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--
T ss_pred HHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--
Confidence 999887532 2389999999999999999999999 89999999999999 6678899999999987654332
Q ss_pred eecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCCcC
Q 007455 472 TTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADAD 551 (603)
Q Consensus 472 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (603)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ........... .. ......
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~~~~-~~-----~~~~~~ 312 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND------AETLNNILACR-WD-----LEDEEF 312 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTC-CC-----SCSGGG
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcc-CC-----CChhhh
Confidence 2345699999999999988999999999999999999999999975321 11111111111 00 000011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 552 METVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 552 ~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
...+.++.+++.+||+.||++|||++|+++
T Consensus 313 ~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 313 QDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 234567999999999999999999999996
No 123
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.7e-41 Score=344.30 Aligned_cols=248 Identities=22% Similarity=0.333 Sum_probs=179.7
Q ss_pred CCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCC-CCeeeecceeeecCCccEEEEEecCCCC
Q 007455 316 EDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIK-HINLVNLRGYCRLPATKLLIYDYLSMGS 393 (603)
Q Consensus 316 ~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 393 (603)
.+.||+|+||.||+|.+.. +..||||++... ....+.+|+.++..+. ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 4789999999999999874 567999998542 3456889999999997 9999999999999999999999999999
Q ss_pred ccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC---CeEEeecccccccCCCCcc
Q 007455 394 LDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL---EPHVSDFGLAKLLVDEEAH 470 (603)
Q Consensus 394 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfG~~~~~~~~~~~ 470 (603)
|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++.......
T Consensus 93 L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~- 164 (325)
T 3kn6_A 93 LFERIKKKKH----FSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ- 164 (325)
T ss_dssp HHHHHHHCSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-
Confidence 9999987543 89999999999999999999999 899999999999998765 799999999986644322
Q ss_pred eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCC-ccHhHHHHHHhhhCcchhhhcccCCC
Q 007455 471 VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRG-LNVVGWMNTLLKENRLEDVIDKRCAD 549 (603)
Q Consensus 471 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (603)
......||+.|+|||++.+..++.++||||+|+++|||++|+.||........ .......... ...... ...
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i-~~~~~~------~~~ 237 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI-KKGDFS------FEG 237 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHH-TTTCCC------CCS
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHH-HcCCCC------CCc
Confidence 23345689999999999998999999999999999999999999975432111 1111111111 111100 000
Q ss_pred -cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 550 -ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 550 -~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.....+.++.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 01224567999999999999999999999884
No 124
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-40 Score=335.99 Aligned_cols=258 Identities=29% Similarity=0.436 Sum_probs=203.6
Q ss_pred CCCCCCeeeecCCeEEEEEEECCCC----EEEEEEeCCCCCC-hHHHHHHHHHHHhhCCCCeeeecceeeecCCcc-EEE
Q 007455 312 ALDEEDVVGSGGFGTVYRMVMNDCG----TFAVKRIDRSREG-SDQVFERELEILGSIKHINLVNLRGYCRLPATK-LLI 385 (603)
Q Consensus 312 ~~~~~~~ig~G~~g~Vy~~~~~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv 385 (603)
.|...+.||+|+||.||+|.+.++. .+|+|.+...... ..+.+.+|+.++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4455688999999999999864332 5999998754432 345688999999999999999999999776665 999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+.+|+|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ---RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 99999999999997632 2378999999999999999999999 89999999999999999999999999998664
Q ss_pred CCCc---ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 466 DEEA---HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 466 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
.... .......+++.|+|||.+.+..++.++||||+|+++|||++|+.|+..... .... .......
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~---~~~~~~~------ 244 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDL---THFLAQG------ 244 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGH---HHHHHTT------
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHH---HHHhhcC------
Confidence 4321 122345678899999999998999999999999999999997666533211 1111 1111111
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
.....+...+..+.+++.+||+.+|.+|||++++++.|+++...
T Consensus 245 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 245 ---RRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11112333456799999999999999999999999999986543
No 125
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.5e-40 Score=339.39 Aligned_cols=251 Identities=25% Similarity=0.326 Sum_probs=204.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC------hHHHHHHHHHHHhhCCCCeeeecceeeecCCcc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG------SDQVFERELEILGSIKHINLVNLRGYCRLPATK 382 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 382 (603)
.+.|++.+.||+|+||.||+|.+.. +..||+|.+...... ..+.+.+|+.++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 3568889999999999999999874 567999998654322 356799999999999999999999999999999
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC----CeEEeec
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL----EPHVSDF 458 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 458 (603)
++||||+++++|.+++..... +++..++.++.|++.||+|||++ +++||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSC----EEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 999999999999999976433 88999999999999999999999 899999999999999888 7999999
Q ss_pred ccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCc
Q 007455 459 GLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR 538 (603)
Q Consensus 459 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 538 (603)
|++........ .....||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ...........
T Consensus 164 g~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~- 234 (321)
T 2a2a_A 164 GLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANITSVS- 234 (321)
T ss_dssp TTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTC-
T ss_pred ccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhcc-
Confidence 99987654322 2345689999999999988999999999999999999999999965321 11111111100
Q ss_pred chhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 539 LEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.. ... ......+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~--~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 235 YD--FDE---EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CC--CCH---HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred cc--cCh---hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 000 000123467899999999999999999999986
No 126
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.6e-40 Score=348.41 Aligned_cols=265 Identities=23% Similarity=0.304 Sum_probs=202.1
Q ss_pred hhCCCCCCeeeec--CCeEEEEEEEC-CCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 310 LEALDEEDVVGSG--GFGTVYRMVMN-DCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 310 ~~~~~~~~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
.++|++.+.||+| +||.||+|.+. ++..||||++...... ..+.+.+|+.+++.++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4678999999999 99999999987 4567999999654322 23568889999999999999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999999986532 2389999999999999999999999 8999999999999999999999999998654
Q ss_pred CCCCc------ceeecccccccccCcccccc--CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhh-
Q 007455 465 VDEEA------HVTTVVAGTFGYLAPEYLQS--GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLK- 535 (603)
Q Consensus 465 ~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~- 535 (603)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ...........
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~ 256 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKLNGTVPC 256 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT--HHHHC-------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHhcCCCCc
Confidence 32211 11223468899999999987 578999999999999999999999997532111 00000000000
Q ss_pred ---------------------hCcchhhh----------cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 536 ---------------------ENRLEDVI----------DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 536 ---------------------~~~~~~~~----------~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
........ .......+...+.++.+|+.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 257 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp -------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00000000 00000122334567999999999999999999999985
No 127
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2e-41 Score=351.88 Aligned_cols=245 Identities=24% Similarity=0.297 Sum_probs=193.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCC---ChHHHHHHHHHH-HhhCCCCeeeecceeeecCCccEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSRE---GSDQVFERELEI-LGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
.++|++.+.||+|+||.||+|.++. +..||+|++..... .....+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 4678889999999999999999875 45699999965432 223446677776 567899999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++..... +++..+..++.||+.||+|||++ +|+||||||+|||++.+|++||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERC----FLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 9999999999999986543 88999999999999999999999 8999999999999999999999999999864
Q ss_pred CCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~-------- 254 (373)
T 2r5t_A 190 IEHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDNILNK-------- 254 (373)
T ss_dssp BCCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH------HHHHHHHHHS--------
T ss_pred ccCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHhc--------
Confidence 3322 223456799999999999998999999999999999999999999975321 1111111111
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRPSMNQ 578 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~e 578 (603)
....+...+.++.+++.+||+.||++||++.+
T Consensus 255 --~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 255 --PLQLKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp --CCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred --ccCCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 11122234567999999999999999999853
No 128
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.2e-41 Score=342.81 Aligned_cols=262 Identities=23% Similarity=0.375 Sum_probs=210.7
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC------CCEEEEEEeCCCCCC-hHHHHHHHHHHHhhCCCCeeeecceeeecCCc
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMND------CGTFAVKRIDRSREG-SDQVFERELEILGSIKHINLVNLRGYCRLPAT 381 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 381 (603)
..++|++.+.||+|+||.||+|.+.+ +..||+|.+...... ....+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 102 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 102 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence 45788999999999999999998752 456999998654332 33468899999999999999999999999999
Q ss_pred cEEEEEecCCCCccccccccCC------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEE
Q 007455 382 KLLIYDYLSMGSLDDFLHEHGE------GQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHV 455 (603)
Q Consensus 382 ~~lv~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 455 (603)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEE
Confidence 9999999999999999976321 113368999999999999999999999 8999999999999999999999
Q ss_pred eecccccccCCCCcc-eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHH
Q 007455 456 SDFGLAKLLVDEEAH-VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTL 533 (603)
Q Consensus 456 ~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 533 (603)
+|||+++........ ......+|+.|+|||++.+..++.++||||+|+++|||++ |..||.... ........
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~ 253 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------NEQVLRFV 253 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------HHHHHHHH
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC------HHHHHHHH
Confidence 999999866443221 1223456889999999998899999999999999999999 888886432 11111111
Q ss_pred hhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhccc
Q 007455 534 LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 588 (603)
.. ......+...+..+.+++.+||+.+|++|||+.|+++.|++...
T Consensus 254 ~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 254 ME---------GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HT---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred Hc---------CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11 11122233455679999999999999999999999999988653
No 129
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.6e-41 Score=333.79 Aligned_cols=250 Identities=27% Similarity=0.405 Sum_probs=184.6
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC---CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR---EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
..++|++.+.||+|+||.||+|.+. ++..||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 4578899999999999999999985 56689999985432 2234668999999999999999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++++|.+++.... ..+++..++.++.|+++||.|||++ +++||||||+||+++.++.+||+|||++...
T Consensus 89 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EEECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 999999999999987642 2389999999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
..... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||......... .....
T Consensus 163 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---------------~~~~~ 226 (278)
T 3cok_A 163 KMPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL---------------NKVVL 226 (278)
T ss_dssp C-----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCS
T ss_pred cCCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH---------------HHHhh
Confidence 43322 223456899999999999888999999999999999999999999754221100 00000
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. ....+...+.++.+++.+||+.||++|||++++++
T Consensus 227 ~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 227 A-DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp S-CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred c-ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 0 01122334567999999999999999999999986
No 130
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.3e-41 Score=338.06 Aligned_cols=257 Identities=23% Similarity=0.358 Sum_probs=205.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeee--cCCccEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCR--LPATKLL 384 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 384 (603)
.++|++.+.||+|+||.||+|.+. ++..||+|.+...... ..+.+.+|+.++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467888999999999999999987 4567999998654322 3456889999999999999999999874 4567899
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEecCCCCCeEECCCCCeEEeecc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK-----IIHRDIKSSNILLDENLEPHVSDFG 459 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~DfG 459 (603)
||||+++|+|.+++.........+++..++.++.|++.||+|||+. + ++||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999987554445589999999999999999999998 6 9999999999999999999999999
Q ss_pred cccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcc
Q 007455 460 LAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRL 539 (603)
Q Consensus 460 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (603)
+++....... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ....... ...
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~i-~~~-- 231 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ------KELAGKI-REG-- 231 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HHT--
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH------HHHHHHH-hhc--
Confidence 9987644322 12335689999999999988899999999999999999999999875321 1111111 111
Q ss_pred hhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhh
Q 007455 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQ 585 (603)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~ 585 (603)
.....+...+.++.+++.+||+.+|++|||++|+++.+..
T Consensus 232 ------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 232 ------KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp ------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ------ccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 1112233455679999999999999999999999986644
No 131
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=338.48 Aligned_cols=244 Identities=23% Similarity=0.287 Sum_probs=192.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCCh--HHHHHHHHHHHhhC-CCCeeeecceeeecCCccEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS--DQVFERELEILGSI-KHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 386 (603)
++|+..++||+|+||+||+|.+. ++..||||++....... ......|+..+.++ +||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57899999999999999999987 56789999986544332 23455566665555 8999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 137 e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp ECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred ecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999 569988887653 2389999999999999999999998 899999999999999999999999999987644
Q ss_pred CCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhccc
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKR 546 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (603)
.. ......||+.|+|||++.+ .++.++||||||+++|||++|..|+.... .|. ..........
T Consensus 210 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--------~~~--~~~~~~~~~~---- 272 (311)
T 3p1a_A 210 AG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--------GWQ--QLRQGYLPPE---- 272 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--------HHH--HHTTTCCCHH----
T ss_pred CC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHH--HHhccCCCcc----
Confidence 32 2334569999999999876 78999999999999999999977764321 010 0111111100
Q ss_pred CCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 547 CADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.+...+.++.+++.+||+.||++|||++|+++
T Consensus 273 ---~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 273 ---FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11123467999999999999999999999986
No 132
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.5e-41 Score=342.98 Aligned_cols=259 Identities=29% Similarity=0.457 Sum_probs=205.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCC-E--EEEEEeCCCC-CChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCG-T--FAVKRIDRSR-EGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~-~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 384 (603)
.++|++.+.||+|+||.||+|.+..++ . +|+|.+.... ....+.+.+|+++++++ +||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 468899999999999999999987544 3 5999886432 23345689999999999 89999999999999999999
Q ss_pred EEEecCCCCccccccccC------------CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC
Q 007455 385 IYDYLSMGSLDDFLHEHG------------EGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE 452 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 452 (603)
||||+++|+|.+++.... .....+++..++.++.|+++||.|||++ +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999998653 2234589999999999999999999999 8999999999999999999
Q ss_pred eEEeecccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHH
Q 007455 453 PHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMN 531 (603)
Q Consensus 453 ~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 531 (603)
+||+|||+++...... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... .....
T Consensus 181 ~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~~ 252 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYE 252 (327)
T ss_dssp EEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHH
T ss_pred EEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH------HHHHH
Confidence 9999999987432211 1223446789999999988889999999999999999998 9999865321 11111
Q ss_pred HHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhccc
Q 007455 532 TLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588 (603)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 588 (603)
.... ......+...+.++.+++.+||..+|++|||++|+++.|+++..
T Consensus 253 ~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 253 KLPQ---------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp HGGG---------TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Hhhc---------CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111 11112233445679999999999999999999999999887553
No 133
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=335.76 Aligned_cols=261 Identities=22% Similarity=0.323 Sum_probs=197.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCCh--HHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGS--DQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
.++|++.+.||+|+||.||+|.+.. +..||+|++....... .+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 3578889999999999999999875 5679999986554332 356789999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||+++++|.+++..... +++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 82 e~~~~~~l~~~~~~~~~----~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 82 EYCDHTVLHELDRYQRG----VPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp ECCSEEHHHHHHHTSSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EeCCCchHHHHHhhhcC----CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 99999999988775433 89999999999999999999999 899999999999999999999999999987653
Q ss_pred CCcceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHH-----------h
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTL-----------L 534 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~-----------~ 534 (603)
... ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||....... ........ .
T Consensus 155 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 230 (311)
T 4agu_A 155 PSD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD---QLYLIRKTLGDLIPRHQQVF 230 (311)
T ss_dssp ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCHHHHHHH
T ss_pred ccc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhccccccccccc
Confidence 322 2234568999999999875 567999999999999999999999997542211 11111110 0
Q ss_pred hhCcchhhhc-ccCCC------cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 535 KENRLEDVID-KRCAD------ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 535 ~~~~~~~~~~-~~~~~------~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.......... +.... .....+.++.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000000 00000 00134567899999999999999999999986
No 134
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.1e-40 Score=335.46 Aligned_cols=254 Identities=24% Similarity=0.381 Sum_probs=202.5
Q ss_pred hCCCCCC-eeeecCCeEEEEEEEC---CCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 311 EALDEED-VVGSGGFGTVYRMVMN---DCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 311 ~~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
++|.+.+ .||+|+||.||+|.+. .+..||||.+...... ..+.+.+|+++++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4667777 8999999999999653 2356999999754322 246789999999999999999999999 5677899
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++++|.+++..... +++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++...
T Consensus 95 v~e~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEECCTTEEHHHHHHHCTT----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHhCcC----CCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 9999999999999987543 89999999999999999999999 8999999999999999999999999999877
Q ss_pred CCCCccee--ecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchh
Q 007455 465 VDEEAHVT--TVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541 (603)
Q Consensus 465 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (603)
........ ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ..... ....
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~-~~~~---- 236 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------EVTAM-LEKG---- 236 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHH-HHTT----
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH------HHHHH-HHcC----
Confidence 55433222 22346788999999988889999999999999999999 99998753211 11111 1111
Q ss_pred hhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 542 VIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 542 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.....+...+..+.+++.+||+.||++|||+.++++.|++..
T Consensus 237 ----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 237 ----ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111223345678999999999999999999999999998754
No 135
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1e-40 Score=338.87 Aligned_cols=262 Identities=19% Similarity=0.336 Sum_probs=200.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCC---ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSRE---GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
..+|++.+.||+|+||.||+|.+. ++..||+|++..... .....+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 467889999999999999999985 567899999975332 2345688999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++|+|.+++.........+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999976443344589999999999999999999999 89999999999999999999999999998664
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.... ............ ....
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~-~~~~----- 256 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKKIEQ-CDYP----- 256 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCHHHHHHHHHT-TCSC-----
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc----hhHHHHHHHhhc-ccCC-----
Confidence 4322 2234568999999999998899999999999999999999999986432 111122111111 1100
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.......+.++.+++.+||+.||++|||++++++.|+++.
T Consensus 257 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 257 --PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp --CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 0011234567999999999999999999999999999865
No 136
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.8e-41 Score=345.64 Aligned_cols=249 Identities=19% Similarity=0.355 Sum_probs=194.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCC--CeeeecceeeecCCccEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREG--SDQVFERELEILGSIKH--INLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~ 386 (603)
+.|++.+.||+|+||.||+|.+.++..||||++...... ..+.+.+|+.++.+++| |||+++++++......++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 468888999999999999999988888999998654333 23568899999999986 99999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
| +.+|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+|||++ ++.+||+|||+++....
T Consensus 89 e-~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp C-CCSEEHHHHHHHSCC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred e-CCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 9 567799999987543 89999999999999999999999 899999999999997 57899999999987654
Q ss_pred CCcc-eeecccccccccCcccccc-----------CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHh
Q 007455 467 EEAH-VTTVVAGTFGYLAPEYLQS-----------GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLL 534 (603)
Q Consensus 467 ~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 534 (603)
.... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||.... ..........
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~~~ 234 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAII 234 (343)
T ss_dssp ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHH
T ss_pred ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hHHHHHHHHh
Confidence 3322 2335679999999999864 678889999999999999999999996421 1111111111
Q ss_pred hhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
... .....+...+.++.+++.+||+.||++|||++|+++
T Consensus 235 ~~~--------~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 235 DPN--------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp CTT--------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCC--------cccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 110 011122223457899999999999999999999986
No 137
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.1e-40 Score=331.95 Aligned_cols=250 Identities=26% Similarity=0.338 Sum_probs=203.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
++|++.+.||+|+||.||+|.+.. +..||+|++...... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 578889999999999999999875 567999998654332 23568899999999999999999999999999999999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC---eEEeeccccccc
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE---PHVSDFGLAKLL 464 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfG~~~~~ 464 (603)
|+++|+|.+++..... +++..+..++.|++.||.|||+. +++||||||+||+++.++. +||+|||++...
T Consensus 86 ~~~~~~l~~~~~~~~~----~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 86 LVTGGELFEDIVAREF----YSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp CCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred cCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 9999999998876543 89999999999999999999999 8999999999999987665 999999999776
Q ss_pred CCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
..... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||..... ....... .......
T Consensus 159 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~-~~~~~~~--- 226 (284)
T 3kk8_A 159 NDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQI-KAGAYDY--- 226 (284)
T ss_dssp CSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HHTCCCC---
T ss_pred ccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch------hHHHHHH-HhccccC---
Confidence 54332 2345689999999999998999999999999999999999999865321 1111111 1111000
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
........+.++.+++.+||+.||++|||++|+++
T Consensus 227 --~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 227 --PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp --CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00111234567999999999999999999999987
No 138
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.9e-40 Score=331.17 Aligned_cols=261 Identities=19% Similarity=0.214 Sum_probs=201.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceee-ecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYC-RLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 387 (603)
.++|++.+.||+|+||.||+|.+. .+..||||++...... ..+.+|+++++.++|++++..+..+ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 468999999999999999999985 4556999987543322 2478899999999988877776655 56677899999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE---CCCCCeEEeeccccccc
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLL 464 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~~~~~ 464 (603)
|+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++..
T Consensus 86 ~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp CC-CCBHHHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred cc-CCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 99 8899999875322 389999999999999999999999 89999999999999 78899999999999876
Q ss_pred CCCCcc------eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCc
Q 007455 465 VDEEAH------VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR 538 (603)
Q Consensus 465 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 538 (603)
...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......................
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence 544321 22345789999999999998999999999999999999999999976433222222211111110110
Q ss_pred chhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 539 LEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.. . .....+.++.+++.+||+.+|++|||++++++.|++..
T Consensus 239 ~~----~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 239 IE----V----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp HH----H----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred hh----h----hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 00 0 01123467999999999999999999999999988754
No 139
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=8.6e-41 Score=335.19 Aligned_cols=253 Identities=25% Similarity=0.326 Sum_probs=198.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
.++|.+.+.||+|+||.||+|.+.. +..+|+|++.... ....+.+.+|++++++++||||+++++++......++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 3578889999999999999999864 5679999986543 3345679999999999999999999999999999999999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE---CCCCCeEEeeccccccc
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLL 464 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~~~~~ 464 (603)
|+++|+|.+++.........+++..++.++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999999865433334489999999999999999999999 89999999999999 45678999999999876
Q ss_pred CCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
.... ......||+.|+|||.+. ..++.++||||+|+++|||++|+.||..... ...........
T Consensus 178 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~------~~~~~~~~~~~------- 241 (285)
T 3is5_A 178 KSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL------EEVQQKATYKE------- 241 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCC-------
T ss_pred CCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH------HHHHhhhccCC-------
Confidence 4432 233456899999999886 4688999999999999999999999975321 11111111000
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..........+.++.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 242 PNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000111113467889999999999999999999985
No 140
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.6e-41 Score=362.39 Aligned_cols=253 Identities=23% Similarity=0.330 Sum_probs=207.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCC---CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+. .+..||+|++... .......+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356888899999999999999987 4567999998543 223345688999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||++||+|.+++...+. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+++...
T Consensus 263 mEy~~gg~L~~~l~~~~~--~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 999999999999876432 3389999999999999999999999 89999999999999999999999999998765
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........ +..
T Consensus 338 ~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~--~~~~i~~~----------i~~ 403 (576)
T 2acx_A 338 EGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERL----------VKE 403 (576)
T ss_dssp TTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC--CHHHHHHH----------HHH
T ss_pred cCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch--hHHHHHHH----------hhc
Confidence 4332 334579999999999998889999999999999999999999997643211 11111111 111
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRP-----SMNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~evl~ 581 (603)
.....+...+.++.+++.+||+.||++|| +++|+++
T Consensus 404 ~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 404 VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11122334557899999999999999999 7899884
No 141
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.2e-41 Score=343.13 Aligned_cols=242 Identities=23% Similarity=0.324 Sum_probs=201.9
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC--------hHHHHHHHHHHHhhCCCCeeeecceeeecC
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG--------SDQVFERELEILGSIKHINLVNLRGYCRLP 379 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 379 (603)
..++|++.+.||+|+||.||+|.+.. +..||||.+...... ....+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 35789999999999999999999865 456999998654321 223477899999999999999999999999
Q ss_pred CccEEEEEecCCC-CccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeec
Q 007455 380 ATKLLIYDYLSMG-SLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDF 458 (603)
Q Consensus 380 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 458 (603)
+..++||||+.+| +|.+++..... +++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~----l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPR----LDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCC----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 99999886543 89999999999999999999999 8999999999999999999999999
Q ss_pred ccccccCCCCcceeecccccccccCccccccCCC-CcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhC
Q 007455 459 GLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA-TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537 (603)
Q Consensus 459 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 537 (603)
|+++....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||......
T Consensus 175 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------- 236 (335)
T 3dls_A 175 GSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------- 236 (335)
T ss_dssp TTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------------
T ss_pred ccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------------
Confidence 99987654432 234568999999999987776 78999999999999999999998642110
Q ss_pred cchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. .. ....+...+.++.+++.+||+.||++|||++|+++
T Consensus 237 -~----~~-~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 237 -V----EA-AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp -T----TT-CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -H----hh-ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00 01112224567999999999999999999999997
No 142
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-41 Score=349.41 Aligned_cols=253 Identities=26% Similarity=0.335 Sum_probs=204.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC----CCCEEEEEEeCCCC----CChHHHHHHHHHHHhhC-CCCeeeecceeeecCC
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN----DCGTFAVKRIDRSR----EGSDQVFERELEILGSI-KHINLVNLRGYCRLPA 380 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 380 (603)
.++|++.+.||+|+||.||+|.+. .+..||||+++... ....+.+.+|+++++++ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 468899999999999999999983 56789999986432 22334577899999999 6999999999999999
Q ss_pred ccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccc
Q 007455 381 TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGL 460 (603)
Q Consensus 381 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 460 (603)
..++||||+++|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRER----FTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 99999999999999999986543 89999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCcceeecccccccccCcccccc--CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCc
Q 007455 461 AKLLVDEEAHVTTVVAGTFGYLAPEYLQS--GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR 538 (603)
Q Consensus 461 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 538 (603)
++..............||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... ...........
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~--- 280 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILK--- 280 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHH---
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHhc---
Confidence 98765444444455679999999999975 347889999999999999999999997542211 11112111111
Q ss_pred chhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 007455 539 LEDVIDKRCADADMETVEAILEIAARCTDANPDDRP-----SMNQVLQ 581 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~evl~ 581 (603)
..+..+...+..+.+++.+||..||++|| +++|+++
T Consensus 281 -------~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 281 -------SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp -------CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred -------cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 11223334556789999999999999999 9999986
No 143
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8.6e-41 Score=335.12 Aligned_cols=246 Identities=22% Similarity=0.343 Sum_probs=200.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC--CChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR--EGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+. ++..||+|.+.... ......+.+|+..+..+ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467889999999999999999987 56789999987543 23445688999999999 899999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCC---------------
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDEN--------------- 450 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--------------- 450 (603)
|||+++|+|.+++.........+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999987543334489999999999999999999999 89999999999999844
Q ss_pred ----CCeEEeecccccccCCCCcceeecccccccccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCcccccCCcc
Q 007455 451 ----LEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG-RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLN 525 (603)
Q Consensus 451 ----~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~ 525 (603)
..+||+|||.+....... ...||+.|+|||++.+. .++.++||||||+++|||++|..++....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------ 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------ 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------
Confidence 479999999998765432 23489999999999765 56689999999999999999998764321
Q ss_pred HhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 526 VVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.+ . .......+..+...+.++.+++.+||+.||++|||++|+++
T Consensus 236 --~~-~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 --QW-H---------EIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp --HH-H---------HHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HH-H---------HHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 01 0 11111122223344567999999999999999999999986
No 144
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.8e-40 Score=337.51 Aligned_cols=260 Identities=25% Similarity=0.401 Sum_probs=196.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC----CCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCCc--
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND----CGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPAT-- 381 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 381 (603)
.++|.+.+.||+|+||.||+|.+.. +..||+|.+...... ..+.+.+|+.++++++||||+++++++.....
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 4678888999999999999998653 226999998654333 23568899999999999999999999977653
Q ss_pred ---cEEEEEecCCCCccccccccC--CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEe
Q 007455 382 ---KLLIYDYLSMGSLDDFLHEHG--EGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVS 456 (603)
Q Consensus 382 ---~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 456 (603)
.++||||+++|+|.+++.... .....+++..++.++.|+++||.|||++ +|+||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEe
Confidence 499999999999999985432 2234589999999999999999999998 89999999999999999999999
Q ss_pred ecccccccCCCCc-ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHh
Q 007455 457 DFGLAKLLVDEEA-HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534 (603)
Q Consensus 457 DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 534 (603)
|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||...... . ......
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~---~~~~~~ 263 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---E---MYDYLL 263 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---G---HHHHHH
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH---H---HHHHHH
Confidence 9999987644322 12233457789999999998899999999999999999999 88888653211 1 111111
Q ss_pred hhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.. .....+...+.++.+++.+||..+|++|||++++++.|+++.
T Consensus 264 ~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 264 HG---------HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp TT---------CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cC---------CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11 111222344567999999999999999999999999998754
No 145
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.6e-41 Score=340.94 Aligned_cols=263 Identities=28% Similarity=0.437 Sum_probs=209.7
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC------CCCEEEEEEeCCCCCC-hHHHHHHHHHHHhhC-CCCeeeecceeeecC
Q 007455 308 EKLEALDEEDVVGSGGFGTVYRMVMN------DCGTFAVKRIDRSREG-SDQVFERELEILGSI-KHINLVNLRGYCRLP 379 (603)
Q Consensus 308 ~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 379 (603)
...++|++.+.||+|+||.||+|.+. .+..||||.+...... ..+.+.+|+.++.++ +||||+++++++...
T Consensus 24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 103 (316)
T 2xir_A 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 103 (316)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence 34578999999999999999999852 3356999999765432 335688999999999 799999999998765
Q ss_pred C-ccEEEEEecCCCCccccccccCCC------------CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeE
Q 007455 380 A-TKLLIYDYLSMGSLDDFLHEHGEG------------QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNIL 446 (603)
Q Consensus 380 ~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 446 (603)
+ ..++||||+++|+|.+++...... ...+++..++.++.|+++||.|||++ +|+||||||+||+
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil 180 (316)
T 2xir_A 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL 180 (316)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEE
Confidence 4 489999999999999999875432 12378999999999999999999999 8999999999999
Q ss_pred ECCCCCeEEeecccccccCCCCc-ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCc
Q 007455 447 LDENLEPHVSDFGLAKLLVDEEA-HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGL 524 (603)
Q Consensus 447 l~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~ 524 (603)
++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 181 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--- 257 (316)
T 2xir_A 181 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--- 257 (316)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS---
T ss_pred ECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh---
Confidence 99999999999999987654332 22334567889999999998899999999999999999998 99998653211
Q ss_pred cHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 525 NVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.......... .....+...+.++.+++.+||+.+|++|||++|+++.|+++.
T Consensus 258 ---~~~~~~~~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 258 ---EEFCRRLKEG--------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp ---HHHHHHHHHT--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HHHHHHhccC--------ccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0111111111 011122234567999999999999999999999999998765
No 146
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=6.4e-40 Score=330.42 Aligned_cols=260 Identities=19% Similarity=0.222 Sum_probs=204.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceee-ecCCccEEEEEe
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYC-RLPATKLLIYDY 388 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e~ 388 (603)
++|++.+.||+|+||.||+|.+. ++..||||++...... ..+.+|+.+++.++|++++..+.++ ......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 57888999999999999999985 5567999988654332 3588999999999988877666655 566777999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE---CCCCCeEEeecccccccC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~~~~~~ 465 (603)
+ +++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++...
T Consensus 87 ~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 87 L-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp C-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred c-CCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 9 889999997532 2389999999999999999999999 89999999999999 478899999999998765
Q ss_pred CCCcc------eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcc
Q 007455 466 DEEAH------VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRL 539 (603)
Q Consensus 466 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (603)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........................
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence 54321 124457999999999999989999999999999999999999999764332222222111111111100
Q ss_pred hhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
. . .....+.++.+++.+||+.||++|||++++++.|++..
T Consensus 240 ~----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 240 E----V----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp H----H----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred H----H----HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 0 0 01123467999999999999999999999999998754
No 147
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.2e-40 Score=329.11 Aligned_cols=252 Identities=27% Similarity=0.369 Sum_probs=204.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
.++|++.+.||+|+||.||+|.+. ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467889999999999999999987 55679999986433 3345678999999999999999999999999999999999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCC
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE 467 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~ 467 (603)
|+++++|.+++.... .+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 999999999997643 389999999999999999999998 8999999999999999999999999999865432
Q ss_pred Cc-ceeecccccccccCccccccCCC-CcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 468 EA-HVTTVVAGTFGYLAPEYLQSGRA-TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 468 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.. .......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||....... .....| .....
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~----~~~~~------- 226 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDW----KEKKT------- 226 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-HHHHHH----HTTCT-------
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHh----hhccc-------
Confidence 21 12334568999999999987665 778999999999999999999997532110 111111 11000
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
........+..+.+++.+||+.||++|||++|+++
T Consensus 227 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 227 -YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 00111234567899999999999999999999986
No 148
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.2e-40 Score=360.17 Aligned_cols=256 Identities=23% Similarity=0.305 Sum_probs=208.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCC---CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSR---EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|...+.||+|+||.||+|.+.. ++.||+|++.... ......+.+|++++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 3678888999999999999999874 5679999985432 22345688999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||++||+|.+++.........+++..+..++.||+.||.|||++ +|+||||||+|||++.+|.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999987654445699999999999999999999999 89999999999999999999999999998765
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ............
T Consensus 341 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~--~~~~~~~~~i~~---------- 407 (543)
T 3c4z_A 341 AGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK--VENKELKQRVLE---------- 407 (543)
T ss_dssp TTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC--CCHHHHHHHHHH----------
T ss_pred CCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc--hhHHHHHHHHhh----------
Confidence 4332 233457999999999999989999999999999999999999999764211 111111111111
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSM-----NQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~-----~evl~ 581 (603)
.....+...+.++.+++.+||+.||++||++ +++++
T Consensus 408 ~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 408 QAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp CCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1112233456789999999999999999965 67763
No 149
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=367.36 Aligned_cols=248 Identities=23% Similarity=0.379 Sum_probs=197.8
Q ss_pred eeeecCCeEEEEEEEC---CCCEEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEecCCCC
Q 007455 318 VVGSGGFGTVYRMVMN---DCGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSMGS 393 (603)
Q Consensus 318 ~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 393 (603)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999875 33459999997643 3345779999999999999999999999976 56899999999999
Q ss_pred ccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCccee-
Q 007455 394 LDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVT- 472 (603)
Q Consensus 394 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~~~~- 472 (603)
|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..........
T Consensus 422 L~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 999997542 3489999999999999999999999 899999999999999999999999999987654332221
Q ss_pred -ecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCCc
Q 007455 473 -TVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADA 550 (603)
Q Consensus 473 -~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (603)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ..+ ....... .....
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~---~~~---~~~i~~~---------~~~~~ 560 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG---PEV---MAFIEQG---------KRMEC 560 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS---HHH---HHHHHTT---------CCCCC
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH---HHH---HHHHHcC---------CCCCC
Confidence 22335689999999998999999999999999999998 9999875321 111 1111111 11122
Q ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 551 DMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 551 ~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
+...+.++.+++.+||..+|++||+++++++.|++..
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 3345678999999999999999999999999998753
No 150
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.4e-40 Score=352.04 Aligned_cols=255 Identities=21% Similarity=0.274 Sum_probs=192.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCC--CChHHHHHHHHHHHhhCCCCeeeecceeeecCC------
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSR--EGSDQVFERELEILGSIKHINLVNLRGYCRLPA------ 380 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 380 (603)
.++|++.+.||+|+||.||+|.+.. ++.||||++.... ....+.+.+|+.+++.++||||+++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 4678899999999999999999875 4569999996542 223456889999999999999999999996553
Q ss_pred ccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccc
Q 007455 381 TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGL 460 (603)
Q Consensus 381 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 460 (603)
..|+||||+++ +|.+.+... +++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~~------l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQME------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTSC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 46999999987 465555431 88999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHH-------
Q 007455 461 AKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTL------- 533 (603)
Q Consensus 461 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~------- 533 (603)
++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+....
T Consensus 211 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-----~~~~~i~~~lg~p~ 283 (464)
T 3ttj_A 211 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-----DQWNKVIEQLGTPC 283 (464)
T ss_dssp C-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHHHCSCC
T ss_pred eeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHhcCCCC
Confidence 98764332 234467999999999999999999999999999999999999999753211 1111100
Q ss_pred --------------hhhC------cchhhhcccCCC----cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 534 --------------LKEN------RLEDVIDKRCAD----ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 534 --------------~~~~------~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.... .+...+...... .....+.++.+|+.+||..||++|||++|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 000000000000 01122567999999999999999999999996
No 151
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.1e-40 Score=342.83 Aligned_cols=251 Identities=22% Similarity=0.325 Sum_probs=200.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 387 (603)
.++|++.+.||+|+||.||+|.+.. +..||+|.+...... ..+|++++.++ +||||+++++++.+.+..|+|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 4678899999999999999999875 456999999665433 35688888887 79999999999999999999999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCC-C---CeEEeecccccc
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDEN-L---EPHVSDFGLAKL 463 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~---~~kl~DfG~~~~ 463 (603)
|+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+|||+.++ + .+||+|||+++.
T Consensus 97 ~~~gg~L~~~i~~~~~----~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 97 LMKGGELLDKILRQKF----FSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp CCCSCBHHHHHHTCTT----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred CCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 9999999999876543 89999999999999999999999 89999999999998543 3 499999999987
Q ss_pred cCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 464 LVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 464 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ........... .....
T Consensus 170 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~~~~~~i~-~~~~~--- 241 (342)
T 2qr7_A 170 LRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD---DTPEEILARIG-SGKFS--- 241 (342)
T ss_dssp CBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT---SCHHHHHHHHH-HCCCC---
T ss_pred CcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc---CCHHHHHHHHc-cCCcc---
Confidence 654332 23445789999999999887889999999999999999999999975321 11111111111 11110
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.........+.++.+++.+||..||++|||+.|+++
T Consensus 242 --~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 242 --LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp --CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 001112345567999999999999999999999986
No 152
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.9e-41 Score=344.72 Aligned_cols=261 Identities=26% Similarity=0.434 Sum_probs=209.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCC------CEEEEEEeCCCCCC-hHHHHHHHHHHHhhC-CCCeeeecceeeecCCc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDC------GTFAVKRIDRSREG-SDQVFERELEILGSI-KHINLVNLRGYCRLPAT 381 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~------~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 381 (603)
.++|++.+.||+|+||.||+|.+... ..||+|.+...... ..+.+.+|+.+++++ +||||+++++++...+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 46788899999999999999998643 26999999755432 345689999999999 89999999999999999
Q ss_pred cEEEEEecCCCCccccccccCC----------CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC
Q 007455 382 KLLIYDYLSMGSLDDFLHEHGE----------GQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451 (603)
Q Consensus 382 ~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 451 (603)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCC
Confidence 9999999999999999875421 123478999999999999999999999 899999999999999999
Q ss_pred CeEEeecccccccCCCCcc-eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHH
Q 007455 452 EPHVSDFGLAKLLVDEEAH-VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGW 529 (603)
Q Consensus 452 ~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 529 (603)
.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |..||...... ..
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------~~ 275 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN------SK 275 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS------HH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh------HH
Confidence 9999999999866443322 2234557889999999988899999999999999999999 88898653211 01
Q ss_pred HHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 530 MNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
......... ....+...+..+.+++.+||+.+|.+|||++|+++.|++..
T Consensus 276 ~~~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 276 FYKLVKDGY--------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HHHHHHHTC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhcCC--------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 111111110 01112233567999999999999999999999999998754
No 153
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=8.9e-41 Score=333.72 Aligned_cols=251 Identities=29% Similarity=0.435 Sum_probs=198.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecC-CccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLP-ATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~ 388 (603)
.++|++.+.||+|+||.||+|.+. +..||||.+.... ..+.+.+|++++++++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 467889999999999999999886 5789999986543 446689999999999999999999987554 578999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++|+|.+++.... ...+++..++.++.|+++||+|||++ +++||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp CTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred CCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 99999999997642 22378899999999999999999999 89999999999999999999999999987654321
Q ss_pred cceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccC
Q 007455 469 AHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC 547 (603)
Q Consensus 469 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (603)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ........ ...
T Consensus 172 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~------~~~~~~~~---------~~~ 232 (278)
T 1byg_A 172 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK------DVVPRVEK---------GYK 232 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG------GHHHHHTT---------TCC
T ss_pred ----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHhc---------CCC
Confidence 22357889999999998899999999999999999998 99998653211 11111111 111
Q ss_pred CCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 548 ADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 548 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
...+...+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 233 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 1223345578999999999999999999999999998754
No 154
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.7e-40 Score=347.88 Aligned_cols=249 Identities=19% Similarity=0.351 Sum_probs=195.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCC--CCeeeecceeeecCCccEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREG--SDQVFERELEILGSIK--HINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 386 (603)
+.|++.+.||+|+||.||+|.+.++..||||++...... ..+.+.+|+.++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458889999999999999999988888999998654332 3456899999999996 599999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
| +.+++|.+++..... +++..+..++.||+.||.|||++ +|+||||||+|||++ ++.+||+|||+++.+..
T Consensus 136 E-~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHHCSS----CCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 567899999987543 88999999999999999999999 899999999999996 57999999999987654
Q ss_pred CCcc-eeecccccccccCcccccc-----------CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHh
Q 007455 467 EEAH-VTTVVAGTFGYLAPEYLQS-----------GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLL 534 (603)
Q Consensus 467 ~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 534 (603)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ..........
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~~~~ 281 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAII 281 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHH
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----HHHHHHHHHh
Confidence 3322 2344679999999999864 368889999999999999999999996431 1111111111
Q ss_pred hhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.... ....+...+.++.+++.+||+.||++|||++|+++
T Consensus 282 ~~~~--------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 282 DPNH--------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp CTTS--------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Cccc--------cCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 1110 01112222457899999999999999999999985
No 155
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.7e-42 Score=346.57 Aligned_cols=264 Identities=27% Similarity=0.384 Sum_probs=188.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhh--CCCCeeeecceeeecCC----ccEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGS--IKHINLVNLRGYCRLPA----TKLL 384 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~l 384 (603)
++|.+.+.||+|+||.||+|.+. +..||||++... ....+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 57899999999999999999876 678999998543 34557788888887 78999999999998776 6899
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEecCCCCCeEECCCCCeEEe
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH--------HDCCPKIIHRDIKSSNILLDENLEPHVS 456 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 456 (603)
||||+++|+|.+++.... +++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||+
T Consensus 79 v~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEECCTTCCHHHHHHHCC-----BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BC
T ss_pred EEeccCCCCHHHHHhccC-----cchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEe
Confidence 999999999999997542 778889999999999999999 66 89999999999999999999999
Q ss_pred ecccccccCCCCcce---eecccccccccCccccccC------CCCcccchHhHHHHHHHHHhC----------CCCCCc
Q 007455 457 DFGLAKLLVDEEAHV---TTVVAGTFGYLAPEYLQSG------RATEKSDVYSFGVLLLELVTG----------KRPTDP 517 (603)
Q Consensus 457 DfG~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~vl~elltg----------~~p~~~ 517 (603)
|||+++......... .....||+.|+|||++.+. .++.++||||||+++|||++| ..||..
T Consensus 151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~ 230 (303)
T 3gxj_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence 999997765443321 2334699999999998765 344689999999999999999 555543
Q ss_pred ccccCCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCC
Q 007455 518 TFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSP 590 (603)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 590 (603)
...... ...... ...........+.... .....+..+.+++.+||+.||++|||++|+++.|+++....
T Consensus 231 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 231 LVPSDP-SVEEMR-KVVCEQKLRPNIPNRW--QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp TCC-CC-CCC-CH-HHHTTSCCCCCCCGGG--GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred cCCCCc-cHHHHH-HHHHHhhcCCCccccc--cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 211110 000000 1111111111000000 12356678999999999999999999999999999876443
No 156
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=338.72 Aligned_cols=266 Identities=29% Similarity=0.428 Sum_probs=208.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEE-----CCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCC--ccE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVM-----NDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPA--TKL 383 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~ 383 (603)
++|++.+.||+|+||.||+|.+ ..+..||||++........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 5678889999999999999984 245679999998766556678999999999999999999999886654 689
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
+||||+++|+|.+++..... .+++..++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 121 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTT---SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEECCCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 99999999999999986532 389999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCcce--eecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCccccc-----CCccHhHHHHHHhhh
Q 007455 464 LVDEEAHV--TTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVK-----RGLNVVGWMNTLLKE 536 (603)
Q Consensus 464 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~ 536 (603)
........ .....++..|+|||.+.+..++.++||||||+++|||++|..|+...... .......+...
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~---- 270 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF---- 270 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH----
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH----
Confidence 75443321 12345677899999998888999999999999999999999987642100 00000000000
Q ss_pred Ccchhhhcc-cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 537 NRLEDVIDK-RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 537 ~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.+.+.+.. .....+...+.++.+++.+||+.+|++|||++|+++.|+++.
T Consensus 271 -~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 271 -HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp -HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00111111 111223345678999999999999999999999999998754
No 157
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=334.65 Aligned_cols=267 Identities=27% Similarity=0.380 Sum_probs=201.8
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhC--CCCeeeecceeeecC----Cc
Q 007455 308 EKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSI--KHINLVNLRGYCRLP----AT 381 (603)
Q Consensus 308 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----~~ 381 (603)
...++|++.+.||+|+||.||+|.+. +..||||++... ....+.+|.+++... +||||+++++++... ..
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 34578999999999999999999987 578999998543 233455566665554 899999999999877 67
Q ss_pred cEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEEecCCCCCeEECCCCCeEEe
Q 007455 382 KLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC-----CPKIIHRDIKSSNILLDENLEPHVS 456 (603)
Q Consensus 382 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~ 456 (603)
.++||||+++|+|.++++.. .+++..++.++.|++.||+|||++. .++|+||||||+||+++.++.+||+
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred eEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 89999999999999999754 2899999999999999999999861 2379999999999999999999999
Q ss_pred ecccccccCCCCcce---eecccccccccCccccccCCCCcc------cchHhHHHHHHHHHhC----------CCCCCc
Q 007455 457 DFGLAKLLVDEEAHV---TTVVAGTFGYLAPEYLQSGRATEK------SDVYSFGVLLLELVTG----------KRPTDP 517 (603)
Q Consensus 457 DfG~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~slG~vl~elltg----------~~p~~~ 517 (603)
|||+++......... .....||+.|+|||++.+...+.+ +||||||+++|||++| ..||..
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 999997764433221 124569999999999987766655 9999999999999999 555543
Q ss_pred ccccCCccHhHHHHHHhhhCcchhhhcccCCC--cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 518 TFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD--ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
..... ... ............. ...+. .....+.++.+++.+||+.||++|||++|+++.|+++...
T Consensus 265 ~~~~~-~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 265 LVPSD-PSY-EDMREIVCIKKLR----PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp TSCSS-CCH-HHHHHHHTTSCCC----CCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hcCCC-Cch-hhhHHHHhhhccC----ccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 22111 111 1111111111111 11111 1236778899999999999999999999999999986643
No 158
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.3e-40 Score=327.85 Aligned_cols=250 Identities=26% Similarity=0.358 Sum_probs=200.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCC------ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSRE------GSDQVFERELEILGSIKHINLVNLRGYCRLPATKL 383 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 383 (603)
++|++.+.||+|+||.||+|.+. .+..||+|.+..... ...+.+.+|+.++++++||||+++++++......+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888999999999999999987 466799999864322 13567999999999999999999999999999999
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC----CeEEeecc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL----EPHVSDFG 459 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DfG 459 (603)
+||||+++++|.+++..... +++..++.++.|++.||.|||+. +++||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKES----LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 99999999999999976433 89999999999999999999999 899999999999998877 89999999
Q ss_pred cccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcc
Q 007455 460 LAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRL 539 (603)
Q Consensus 460 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (603)
++........ .....|++.|+|||++.+..++.++||||||+++|||++|+.||..... ........... .
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~-~ 228 (283)
T 3bhy_A 158 IAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK------QETLTNISAVN-Y 228 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTTC-C
T ss_pred cceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch------HHHHHHhHhcc-c
Confidence 9987644322 2345689999999999988999999999999999999999999875321 11111111100 0
Q ss_pred hhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. .. .......+..+.+++.+||..||++|||++|+++
T Consensus 229 ~--~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 229 D--FD---EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp C--CC---HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C--Cc---chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 0 00 0001123457899999999999999999999996
No 159
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.5e-40 Score=334.95 Aligned_cols=253 Identities=24% Similarity=0.381 Sum_probs=206.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCCCC---ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRSRE---GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|.+.+.||+|+||.||+|.+.++ ..+|+|.+..... ...+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 35788899999999999999998854 5689998864422 2345688999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++++|.+++..... +++..++.++.|+++||+|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKRRKA----LTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 999999999998876543 89999999999999999999999 89999999999999999999999999998764
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.... ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... ........
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~---------- 229 (294)
T 2rku_A 167 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ETYLRIKK---------- 229 (294)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHT----------
T ss_pred cCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHhh----------
Confidence 3322 223456899999999999888999999999999999999999999753211 11111111
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ--LLEQE 586 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~--~L~~~ 586 (603)
.....+...+..+.+++.+||+.||++|||++|+++ .+.+.
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 230 NEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272 (294)
T ss_dssp TCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred ccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecC
Confidence 011122234467899999999999999999999997 45443
No 160
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.2e-40 Score=340.31 Aligned_cols=198 Identities=26% Similarity=0.301 Sum_probs=172.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCC-----CCeeeecceeeecCCccE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIK-----HINLVNLRGYCRLPATKL 383 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~~~~~ 383 (603)
.++|.+.+.||+|+||.||+|.+. ++..||||++... ......+..|+.+++.+. ||||+++++++...+..+
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 468899999999999999999986 4567999998643 233456788999999986 999999999999999999
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC--------------
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE-------------- 449 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------------- 449 (603)
+||||+ +++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 113 lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp EEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred EEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccc
Confidence 999999 8899999987543 2388999999999999999999999 8999999999999975
Q ss_pred -----------CCCeEEeecccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcc
Q 007455 450 -----------NLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPT 518 (603)
Q Consensus 450 -----------~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~ 518 (603)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 789999999999865432 23456899999999999999999999999999999999999999753
No 161
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.3e-40 Score=330.21 Aligned_cols=247 Identities=23% Similarity=0.386 Sum_probs=195.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCC---CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRS---REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|.+.+.||+|+||.||+|.+. ++..||+|.+... .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357888999999999999999987 5678999998543 223345788999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++++|.+++..... +++..+..++.|++.||.|||++ +++||||||+||+++.++.++|+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHGR----VEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 999999999999976543 89999999999999999999999 89999999999999999999999999998764
Q ss_pred CCCcceeecccccccccCccccccCCC-CcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRA-TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
... ......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||..... ....... ..
T Consensus 163 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~-~~-------- 225 (276)
T 2h6d_A 163 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV------PTLFKKI-RG-------- 225 (276)
T ss_dssp C---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHH-HH--------
T ss_pred CCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HHHHHHh-hc--------
Confidence 432 2234568999999999987665 6899999999999999999999865321 1111111 11
Q ss_pred ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 545 KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 545 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.....+...+..+.+++.+||+.||++|||++|+++
T Consensus 226 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 226 -GVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -CcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 111122234567999999999999999999999997
No 162
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.4e-40 Score=346.59 Aligned_cols=251 Identities=22% Similarity=0.283 Sum_probs=190.9
Q ss_pred hhCCCCC-CeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHh-hCCCCeeeecceeeec----CCcc
Q 007455 310 LEALDEE-DVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILG-SIKHINLVNLRGYCRL----PATK 382 (603)
Q Consensus 310 ~~~~~~~-~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~ 382 (603)
.++|.+. +.||+|+||+||+|.+.. +..||||++.. ...+.+|+.++. ..+||||+++++++.. ....
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3456655 689999999999999875 45699999853 235778888875 4589999999998865 5668
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC---CCCeEEeecc
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE---NLEPHVSDFG 459 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG 459 (603)
|+||||+++|+|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+|||++. ++.+||+|||
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 99999999999999998643 23489999999999999999999998 8999999999999998 7899999999
Q ss_pred cccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCc-cHhHHHHHHhhhCc
Q 007455 460 LAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGL-NVVGWMNTLLKENR 538 (603)
Q Consensus 460 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~ 538 (603)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .... .+....
T Consensus 210 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~----~i~~~~ 283 (400)
T 1nxk_A 210 FAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT----RIRMGQ 283 (400)
T ss_dssp TCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHH----HHHHTC
T ss_pred cccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHH----HHHcCc
Confidence 998654322 234466899999999999999999999999999999999999999764322111 1111 111111
Q ss_pred chhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 539 LEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
... . .......+.++.+|+.+||+.||++|||++|+++
T Consensus 284 ~~~----~-~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 284 YEF----P-NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CCC----C-TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccC----C-CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000 0 0011234567999999999999999999999997
No 163
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=346.39 Aligned_cols=271 Identities=24% Similarity=0.291 Sum_probs=211.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCC--ccEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPA--TKLLIY 386 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 386 (603)
++|.+.+.||+|+||.||+|.+.. +..||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 467888999999999999999875 5679999996533 233466889999999999999999999998765 679999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE----CCCCCeEEeeccccc
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL----DENLEPHVSDFGLAK 462 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfG~~~ 462 (603)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 89 e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp CCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred ecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999986533 22389999999999999999999999 89999999999999 777889999999998
Q ss_pred ccCCCCcceeecccccccccCcccccc--------CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHh
Q 007455 463 LLVDEEAHVTTVVAGTFGYLAPEYLQS--------GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLL 534 (603)
Q Consensus 463 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 534 (603)
....... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||........ ....+....
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~ 240 (396)
T 4eut_A 165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKII 240 (396)
T ss_dssp ECCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHH
T ss_pred EccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHh
Confidence 7654322 234568999999999864 5677899999999999999999999965322111 111222222
Q ss_pred hhCcch---hh-------h--c---ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 535 KENRLE---DV-------I--D---KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 535 ~~~~~~---~~-------~--~---~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
...... .. + . +............+.+++.+||+.||++||+++|+++.++++...
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 211100 00 0 0 001123466778899999999999999999999999998876543
No 164
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=341.73 Aligned_cols=272 Identities=25% Similarity=0.379 Sum_probs=198.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHH--HhhCCCCeeeecceeee-----cCCcc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEI--LGSIKHINLVNLRGYCR-----LPATK 382 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~-----~~~~~ 382 (603)
.++|++.+.||+|+||.||+|.+. +..||||++.... ...+..|.++ +..++||||+++++.+. .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSLD-ERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEEC-CeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 468889999999999999999874 5789999986432 2334444444 55689999999997543 23356
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEEecCCCCCeEECCCCCeEEe
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC------CPKIIHRDIKSSNILLDENLEPHVS 456 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~kl~ 456 (603)
++||||+++|+|.+++.... .++..++.++.|+++||+|||+.. .++|+||||||+|||++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 89999999999999997643 588999999999999999999872 2379999999999999999999999
Q ss_pred ecccccccCCCCc-------ceeecccccccccCcccccc-------CCCCcccchHhHHHHHHHHHhCCCCCCcccccC
Q 007455 457 DFGLAKLLVDEEA-------HVTTVVAGTFGYLAPEYLQS-------GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKR 522 (603)
Q Consensus 457 DfG~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~ 522 (603)
|||+++.+..... .......||+.|+|||++.+ ..++.++||||||+++|||++|..||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987654221 12234569999999999976 456678999999999999999988765432211
Q ss_pred Ccc-----------HhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCCC
Q 007455 523 GLN-----------VVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPC 591 (603)
Q Consensus 523 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 591 (603)
... .................+..... .....+.++.+++.+||+.||++|||++|+++.|+++.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK-ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC-CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccc-cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 110 00111111111111111111111 123466789999999999999999999999999998664433
No 165
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.4e-39 Score=335.13 Aligned_cols=264 Identities=26% Similarity=0.368 Sum_probs=207.6
Q ss_pred HHHhhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhh--CCCCeeeecceeeecCC----
Q 007455 307 IEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGS--IKHINLVNLRGYCRLPA---- 380 (603)
Q Consensus 307 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~---- 380 (603)
....++|++.+.||+|+||.||+|.+. ++.||||.+... ....+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 344578999999999999999999985 578999998543 34567889999887 78999999999998776
Q ss_pred ccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEEecCCCCCeEECCCCC
Q 007455 381 TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH--------HDCCPKIIHRDIKSSNILLDENLE 452 (603)
Q Consensus 381 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~ 452 (603)
..++||||+++|+|.+++... .+++..++.++.|++.||.||| +. +|+||||||+||+++.++.
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSC
T ss_pred eeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCC
Confidence 789999999999999999764 2899999999999999999999 66 8999999999999999999
Q ss_pred eEEeecccccccCCCCcc---eeecccccccccCccccccC------CCCcccchHhHHHHHHHHHhC----------CC
Q 007455 453 PHVSDFGLAKLLVDEEAH---VTTVVAGTFGYLAPEYLQSG------RATEKSDVYSFGVLLLELVTG----------KR 513 (603)
Q Consensus 453 ~kl~DfG~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~vl~elltg----------~~ 513 (603)
+||+|||++......... ......||+.|+|||++.+. .++.++||||||+++|||++| ..
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 999999999876544322 12345689999999998765 233689999999999999999 66
Q ss_pred CCCcccccCCccHhHHHHHHhhhCcchhhhcccCCC--cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhccc
Q 007455 514 PTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCAD--ADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVM 588 (603)
Q Consensus 514 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 588 (603)
||...... ......+..... ..... ...+. .....+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 266 p~~~~~~~-~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 266 PYYDLVPS-DPSVEEMRKVVC-EQKLR----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp TTTTTSCS-SCCHHHHHHHHT-TSCCC----CCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccccCcC-cccHHHHHHHHH-HHHhC----CCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 77543221 112222222211 11111 11111 123567789999999999999999999999999998653
No 166
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.5e-40 Score=347.29 Aligned_cols=252 Identities=23% Similarity=0.355 Sum_probs=190.9
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCC--------ChHHHHHHHHHHHhhCCCCeeeecceeeecC
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSRE--------GSDQVFERELEILGSIKHINLVNLRGYCRLP 379 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 379 (603)
..++|.+.+.||+|+||.||+|.+.. +..||||++..... .....+.+|+.++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 35789999999999999999999875 45799999864321 112247899999999999999999999854
Q ss_pred CccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC---CeEEe
Q 007455 380 ATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL---EPHVS 456 (603)
Q Consensus 380 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~ 456 (603)
+..++||||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSCC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred CceEEEEEcCCCCcHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 557999999999999998876543 89999999999999999999999 899999999999997544 59999
Q ss_pred ecccccccCCCCcceeecccccccccCcccccc---CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHH
Q 007455 457 DFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS---GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTL 533 (603)
Q Consensus 457 DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 533 (603)
|||+++...... ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... ......
T Consensus 285 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~~~~---- 356 (419)
T 3i6u_A 285 DFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLKDQ---- 356 (419)
T ss_dssp CSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS--CCHHHH----
T ss_pred ecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch--HHHHHH----
Confidence 999998765432 2344679999999999853 56788999999999999999999999753211 111111
Q ss_pred hhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 534 LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
........ .+......+..+.+++.+||+.||++|||++|+++
T Consensus 357 i~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 357 ITSGKYNF-----IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHTTCCCC-----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhcCCCCC-----CchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 11110000 00001123467999999999999999999999986
No 167
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=336.23 Aligned_cols=261 Identities=24% Similarity=0.305 Sum_probs=198.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC-----CChHHHHHHHHHHHhhCC---CCeeeecceeeecCC
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR-----EGSDQVFERELEILGSIK---HINLVNLRGYCRLPA 380 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~ 380 (603)
.++|++.+.||+|+||+||+|.+. .+..||+|++.... ......+.+|+.+++.++ ||||+++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 468999999999999999999975 45679999985322 222345778888877775 999999999997765
Q ss_pred -----ccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEE
Q 007455 381 -----TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHV 455 (603)
Q Consensus 381 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 455 (603)
..++||||+.+ +|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 88 ~~~~~~~~lv~e~~~~-~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 88 TDREIKVTLVFEHVDQ-DLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp SSSEEEEEEEEECCCC-BHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCceeEEEEehhhhc-CHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 47899999985 99999887543 2389999999999999999999999 8999999999999999999999
Q ss_pred eecccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhh
Q 007455 456 SDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLK 535 (603)
Q Consensus 456 ~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 535 (603)
+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+.....
T Consensus 162 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~ 236 (308)
T 3g33_A 162 ADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA---DQLGKIFDLIG 236 (308)
T ss_dssp CSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH---HHHHHHHHHHC
T ss_pred eeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhC
Confidence 9999998764332 234567899999999999889999999999999999999999999753211 11111111110
Q ss_pred hC---cchh-------hhcccCCC----cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 536 EN---RLED-------VIDKRCAD----ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 536 ~~---~~~~-------~~~~~~~~----~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.. .+.. .+....+. .....+.++.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 0000 00000000 01134467899999999999999999999986
No 168
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.3e-40 Score=335.22 Aligned_cols=250 Identities=26% Similarity=0.377 Sum_probs=202.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
.++|.+.+.||+|+||.||+|.+. +++.||+|.+........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 357888999999999999999987 5667999999765554556789999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE---CCCCCeEEeecccccccC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~~~~~~ 465 (603)
+++++|.+++...+. +++..+..++.|++.||.|||+. +++||||||+||++ +.++.++|+|||++....
T Consensus 88 ~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 88 VSGGELFDRILERGV----YTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCSCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred CCCccHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 999999999876543 89999999999999999999999 89999999999999 788899999999997643
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.. ......|++.|+|||++.+..++.++||||+|+++|||++|+.||..... ........ .....
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~-~~~~~----- 225 (304)
T 2jam_A 161 NG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE------SKLFEKIK-EGYYE----- 225 (304)
T ss_dssp CB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHH-HCCCC-----
T ss_pred CC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHH-cCCCC-----
Confidence 32 12335689999999999988999999999999999999999999865321 11111111 11100
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.........+.++.+++.+||..||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 226 FESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 001112234567999999999999999999999986
No 169
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.9e-40 Score=340.65 Aligned_cols=245 Identities=29% Similarity=0.422 Sum_probs=198.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCCh---HHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS---DQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
+.|+..+.||+|+||.||+|.+. ++..||||++....... .+.+.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 45778899999999999999985 45569999996543332 246889999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||+. |+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp ECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred ecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9998 58888776432 2389999999999999999999999 899999999999999999999999999987643
Q ss_pred CCcceeecccccccccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQ---SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
. ....||+.|+|||++. ...++.++||||||+++|||++|+.||.... .............
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~------~~~~~~~~~~~~~----- 270 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNES----- 270 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCC-----
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhcCC-----
Confidence 2 2356899999999884 5678999999999999999999999986432 1111111111110
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
........+..+.+++.+||+.+|++|||++++++
T Consensus 271 ---~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 271 ---PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 00112234567899999999999999999999986
No 170
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.5e-40 Score=341.40 Aligned_cols=253 Identities=24% Similarity=0.379 Sum_probs=206.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCCCC---ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRSRE---GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|.+.+.||+|+||.||+|.+.++ ..+|+|.+..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 35788889999999999999998764 5689998864422 2345688999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++++|.+++..... +++..++.++.|+++||.|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~e~~~~~~L~~~~~~~~~----l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKRRKA----LTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 999999999998876433 89999999999999999999999 89999999999999999999999999998764
Q ss_pred CCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDK 545 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (603)
.... ......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ......... .
T Consensus 193 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~-~-------- 256 (335)
T 2owb_A 193 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL------KETYLRIKK-N-------- 256 (335)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHH-T--------
T ss_pred cCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH------HHHHHHHhc-C--------
Confidence 3322 22345689999999999988899999999999999999999999975321 111111111 1
Q ss_pred cCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhc
Q 007455 546 RCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ--LLEQE 586 (603)
Q Consensus 546 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~--~L~~~ 586 (603)
....+...+..+.+++.+||+.||++|||++|+++ .+.+.
T Consensus 257 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~ 298 (335)
T 2owb_A 257 -EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298 (335)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred -CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 01112234467899999999999999999999996 45443
No 171
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.6e-40 Score=366.45 Aligned_cols=247 Identities=23% Similarity=0.386 Sum_probs=197.1
Q ss_pred CeeeecCCeEEEEEEEC---CCCEEEEEEeCCCCC--ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEecCC
Q 007455 317 DVVGSGGFGTVYRMVMN---DCGTFAVKRIDRSRE--GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYLSM 391 (603)
Q Consensus 317 ~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 391 (603)
+.||+|+||.||+|.+. .+..||||+++.... ...+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999764 234699999975432 234679999999999999999999999864 568899999999
Q ss_pred CCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCcc-
Q 007455 392 GSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAH- 470 (603)
Q Consensus 392 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~~- 470 (603)
|+|.+++..... +++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 454 g~L~~~l~~~~~----l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQNRH----VKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHCTT----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhCCC----CCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999976543 89999999999999999999999 8999999999999999999999999999876543321
Q ss_pred -eeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCC
Q 007455 471 -VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548 (603)
Q Consensus 471 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (603)
......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ..... +... ...
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~------~~~~~-i~~~--------~~~ 591 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------EVTAM-LEKG--------ERM 591 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHH-HHTT--------CCC
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHH-HHcC--------CCC
Confidence 2233446789999999999999999999999999999998 99999653211 11111 1111 111
Q ss_pred CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhc
Q 007455 549 DADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQE 586 (603)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~ 586 (603)
..+...+.++.+++.+||+.||++|||++++++.|++.
T Consensus 592 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 592 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 22334567899999999999999999999999999874
No 172
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=5.2e-40 Score=332.47 Aligned_cols=247 Identities=27% Similarity=0.428 Sum_probs=204.4
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
+.|+..+.||+|+||.||+|.+. .+..||+|.+.... ....+.+.+|+.+++.++||||+++++++......++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 56788899999999999999986 45679999986543 33456789999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++++|.+++... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 102 LGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp CTTEEHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred CCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 9999999998753 389999999999999999999999 89999999999999999999999999998765432
Q ss_pred cceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCC
Q 007455 469 AHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548 (603)
Q Consensus 469 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (603)
. ......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ....... ... ...
T Consensus 174 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~-~~~--------~~~ 237 (303)
T 3a7i_A 174 I-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP------MKVLFLI-PKN--------NPP 237 (303)
T ss_dssp C-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHH-HHS--------CCC
T ss_pred c-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH------HHHHHHh-hcC--------CCC
Confidence 2 22345689999999999988999999999999999999999999864321 1111111 111 111
Q ss_pred CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 549 DADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..+...+..+.+++.+||+.+|++|||++|+++
T Consensus 238 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 238 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 122234567999999999999999999999986
No 173
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.2e-40 Score=347.92 Aligned_cols=243 Identities=18% Similarity=0.201 Sum_probs=189.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCC---CCChHHHHHHHH---HHHhhCCCCeeeecc-------ee
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRS---REGSDQVFEREL---EILGSIKHINLVNLR-------GY 375 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 375 (603)
.++|++.+.||+|+||.||+|.+. ++..||||++... .....+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 357888899999999999999975 5678999999633 333456789999 455566899999998 55
Q ss_pred eecCC-----------------ccEEEEEecCCCCccccccccCC---CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 007455 376 CRLPA-----------------TKLLIYDYLSMGSLDDFLHEHGE---GQQLLNWSARLKIALGSARGLAYLHHDCCPKI 435 (603)
Q Consensus 376 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 435 (603)
+..++ ..|+||||+ +|+|.+++..... ....+++..++.++.|++.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55443 278999999 5799999986422 122344688889999999999999999 89
Q ss_pred EEecCCCCCeEECCCCCeEEeecccccccCCCCcceeecccccccccCccccccC-----------CCCcccchHhHHHH
Q 007455 436 IHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG-----------RATEKSDVYSFGVL 504 (603)
Q Consensus 436 vH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slG~v 504 (603)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986332 2344567 999999999877 89999999999999
Q ss_pred HHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 505 LLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 505 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
+|||++|+.||........ ... +.... ...+.++.+++.+||+.||++|||+.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~~---------------~~~-~~~~~----~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG---------------SEW-IFRSC----KNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CC---------------SGG-GGSSC----CCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccc---------------hhh-hhhhc----cCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999965322111 111 11111 123467999999999999999999999985
No 174
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=8.7e-40 Score=329.28 Aligned_cols=253 Identities=25% Similarity=0.350 Sum_probs=199.3
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEec
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDYL 389 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 389 (603)
++|....+||+|+||.||+|.+.. +..||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 345556699999999999999864 4579999997665555677999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC-CCCeEEeecccccccCCCC
Q 007455 390 SMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE-NLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 390 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~~~~~~~~~ 468 (603)
++++|.+++..... ...+++..+..++.|++.||.|||++ +++||||||+||+++. ++.+||+|||++.......
T Consensus 102 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 102 PGGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp SEEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999986432 23367889999999999999999999 8999999999999987 8999999999998764432
Q ss_pred cceeecccccccccCccccccCC--CCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhccc
Q 007455 469 AHVTTVVAGTFGYLAPEYLQSGR--ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKR 546 (603)
Q Consensus 469 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (603)
. ......|++.|+|||++.+.. ++.++||||||+++|||++|+.||..... ... ...... ....
T Consensus 178 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~-~~~~~~---------~~~~ 243 (295)
T 2clq_A 178 P-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE---PQA-AMFKVG---------MFKV 243 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS---HHH-HHHHHH---------HHCC
T ss_pred C-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc---hhH-HHHhhc---------cccc
Confidence 1 223456899999999987643 78999999999999999999999864211 000 000000 0011
Q ss_pred CCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 547 CADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 547 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.+..+...+.++.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 244 HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11223345567999999999999999999999985
No 175
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.7e-40 Score=345.60 Aligned_cols=261 Identities=27% Similarity=0.391 Sum_probs=188.8
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCC--ChHHHHHHHHHHHhhCC-CCeeeecceeeecCC--cc
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSRE--GSDQVFERELEILGSIK-HINLVNLRGYCRLPA--TK 382 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~ 382 (603)
..++|++.+.||+|+||.||+|.+.. +..||||++..... .....+.+|+.++.++. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 35789999999999999999999874 56799999865432 23456789999999997 999999999997544 67
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
|+||||+++ +|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 87 ~lv~e~~~~-~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 87 YLVFDYMET-DLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEECCSE-EHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEecccCc-CHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 999999985 899888753 288999999999999999999999 89999999999999999999999999998
Q ss_pred ccCCC--------------------CcceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCccccc
Q 007455 463 LLVDE--------------------EAHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVK 521 (603)
Q Consensus 463 ~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~ 521 (603)
.+... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 65331 1112234579999999999876 67899999999999999999999999753211
Q ss_pred CCccHhHHHHHHhhhCcchhh-----------h----------cccCCC-------------cCHHHHHHHHHHHHHccc
Q 007455 522 RGLNVVGWMNTLLKENRLEDV-----------I----------DKRCAD-------------ADMETVEAILEIAARCTD 567 (603)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~-----------~----------~~~~~~-------------~~~~~~~~l~~li~~cl~ 567 (603)
. ...-+............ + ...... .....+.++.+|+.+||.
T Consensus 238 ~---~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~ 314 (388)
T 3oz6_A 238 N---QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314 (388)
T ss_dssp H---HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCC
T ss_pred H---HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhc
Confidence 0 00000000000000000 0 000000 001234578999999999
Q ss_pred CCCCCCCCHHHHHH
Q 007455 568 ANPDDRPSMNQVLQ 581 (603)
Q Consensus 568 ~~P~~RPs~~evl~ 581 (603)
.||++|||++|+++
T Consensus 315 ~dP~~R~t~~e~l~ 328 (388)
T 3oz6_A 315 FNPNKRISANDALK 328 (388)
T ss_dssp SSGGGSCCHHHHTT
T ss_pred cCcccCCCHHHHhC
Confidence 99999999999986
No 176
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5e-41 Score=343.30 Aligned_cols=260 Identities=23% Similarity=0.360 Sum_probs=193.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCCh-HHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS-DQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
++|.+.+.||+|+||.||+|.+. ++..||+|++....... ...+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57888999999999999999987 55679999986443221 12356799999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++ +|.+++...+. .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LDK-DLKQYLDDCGN---IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CSE-EHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred ccc-CHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 985 89888876432 388999999999999999999999 89999999999999999999999999998654332
Q ss_pred cceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhC---cchhhhc
Q 007455 469 AHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN---RLEDVID 544 (603)
Q Consensus 469 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 544 (603)
. ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... .....+....... .+.....
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~ 230 (324)
T 3mtl_A 155 K-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE---EQLHFIFRILGTPTEETWPGILS 230 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred c-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCChHhchhhhc
Confidence 2 2234568999999999876 56899999999999999999999999754211 1111111111100 0000000
Q ss_pred c------cCC--------CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 545 K------RCA--------DADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 545 ~------~~~--------~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. ..+ ......+.++.+|+.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0 000 011123467899999999999999999999986
No 177
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.2e-40 Score=337.80 Aligned_cols=260 Identities=25% Similarity=0.361 Sum_probs=204.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC------CCCEEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCCcc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN------DCGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPATK 382 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 382 (603)
.++|++.+.||+|+||.||+|.+. .+..||||.+.... ......+.+|+.++++++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 367889999999999999999843 34579999986443 23345688999999999999999999999999999
Q ss_pred EEEEEecCCCCccccccccCCC---CccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCC---CCeEEe
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEG---QQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDEN---LEPHVS 456 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~ 456 (603)
++||||+++|+|.+++...... ...+++..++.++.|++.||.|||++ +++||||||+||+++.+ ..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999875421 23488999999999999999999999 89999999999999844 469999
Q ss_pred ecccccccCCCCc-ceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHh
Q 007455 457 DFGLAKLLVDEEA-HVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLL 534 (603)
Q Consensus 457 DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 534 (603)
|||+++....... .......|++.|+|||++.+..++.++||||||+++|||++ |+.||..... ........
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~~~ 259 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QEVLEFVT 259 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH------HHHHHHHh
Confidence 9999976543222 22234567889999999988899999999999999999998 8899864321 11111111
Q ss_pred hhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.. .....+...+..+.+++.+||+.+|++|||++|+++.|+...
T Consensus 260 ~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 260 SG---------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp TT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cC---------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 11 111222344567999999999999999999999999988754
No 178
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.3e-40 Score=339.11 Aligned_cols=258 Identities=20% Similarity=0.296 Sum_probs=192.9
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
..++|++.+.||+|+||+||+|.+.. +..||||++...... ..+.+.+|+.++++++||||+++++++...+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 46789999999999999999999874 456999998654322 234578999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEEC-----CCCCeEEeeccc
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD-----ENLEPHVSDFGL 460 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-----~~~~~kl~DfG~ 460 (603)
|||+++ +|.+++..... +++..+..++.|++.||+|||++ +|+||||||+|||++ .++.+||+|||+
T Consensus 112 ~e~~~~-~L~~~~~~~~~----~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKNPD----VSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCSE-EHHHHHHHCTT----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCCC-CHHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999985 99999987544 89999999999999999999999 899999999999994 455699999999
Q ss_pred ccccCCCCcceeecccccccccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhh---
Q 007455 461 AKLLVDEEAHVTTVVAGTFGYLAPEYLQSG-RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE--- 536 (603)
Q Consensus 461 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 536 (603)
++....... ......||+.|+|||++.+. .++.++||||+|+++|||++|+.||...... .........
T Consensus 184 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~~ 256 (329)
T 3gbz_A 184 ARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI------DQLFKIFEVLGL 256 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCC
T ss_pred ccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH------HHHHHHHHHhCC
Confidence 987643322 23345689999999998764 4899999999999999999999999753211 111111100
Q ss_pred ---Ccchhhh-----cccCC---Cc------CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 537 ---NRLEDVI-----DKRCA---DA------DMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 537 ---~~~~~~~-----~~~~~---~~------~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..+.... ....+ .. ....+.++.+|+.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 257 PDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000000 00000 00 0113467899999999999999999999986
No 179
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.4e-39 Score=333.32 Aligned_cols=254 Identities=18% Similarity=0.285 Sum_probs=198.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCC-CCeeeecceeeec--CCccEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIK-HINLVNLRGYCRL--PATKLLIY 386 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~ 386 (603)
++|++.+.||+|+||.||+|.+. ++..||||++... ..+.+.+|+.++++++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 57888999999999999999975 5567999998643 3467899999999997 9999999999987 56789999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC-CeEEeecccccccC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL-EPHVSDFGLAKLLV 465 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfG~~~~~~ 465 (603)
||+++++|.+++.. ++...+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++...
T Consensus 113 e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp ECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 99999999998853 78899999999999999999999 899999999999999777 89999999998765
Q ss_pred CCCcceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhc
Q 007455 466 DEEAHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVID 544 (603)
Q Consensus 466 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (603)
.... .....|+..|+|||++.+ ..++.++||||+|+++|||++|+.||...... .................+.++
T Consensus 183 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 183 PGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp TTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH--HHHHHHHHHHHCHHHHHHHHH
T ss_pred CCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch--HHHHHHHHHhcCCchhhhHHH
Confidence 4332 234568999999999876 67899999999999999999999998543211 000000000000000000000
Q ss_pred cc-----------------------C-CCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 545 KR-----------------------C-ADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 545 ~~-----------------------~-~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.. . .......+.++.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 0 0011224678999999999999999999999986
No 180
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=342.14 Aligned_cols=261 Identities=15% Similarity=0.203 Sum_probs=202.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC---------CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeee----------
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND---------CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVN---------- 371 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 371 (603)
++|++.+.||+|+||.||+|.+.. +..||+|.+... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578889999999999999999875 567999998644 34889999999999999998
Q ss_pred -----cceeeec-CCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCe
Q 007455 372 -----LRGYCRL-PATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNI 445 (603)
Q Consensus 372 -----l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 445 (603)
+++++.. ....++||||+ +++|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NI 190 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENI 190 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHE
Confidence 5566655 67789999999 899999998652 23489999999999999999999999 899999999999
Q ss_pred EECCCC--CeEEeecccccccCCCCcc------eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCc
Q 007455 446 LLDENL--EPHVSDFGLAKLLVDEEAH------VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDP 517 (603)
Q Consensus 446 ll~~~~--~~kl~DfG~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~ 517 (603)
+++.++ .+||+|||+++.+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 8999999999876543221 12345799999999999988999999999999999999999999975
Q ss_pred ccccCCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 518 TFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
..... .......... ... ......... .....+.++.+++.+||+.||++|||++++++.|+++.
T Consensus 271 ~~~~~-~~~~~~~~~~-~~~-~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 271 CLPNT-EDIMKQKQKF-VDK-PGPFVGPCG--HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp GTTCH-HHHHHHHHHH-HHS-CCCEECTTS--CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CCcCH-HHHHHHHHhc-cCC-hhhhhhhcc--ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 42110 1111111111 100 000000000 00123467999999999999999999999999988765
No 181
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.8e-40 Score=330.91 Aligned_cols=252 Identities=25% Similarity=0.447 Sum_probs=203.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeec----------
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRL---------- 378 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 378 (603)
..+|++.+.||+|+||.||+|.+. ++..||+|.+.... ..+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 357888999999999999999987 56789999986543 247789999999999999999998754
Q ss_pred ------CCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC
Q 007455 379 ------PATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE 452 (603)
Q Consensus 379 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 452 (603)
....++||||+++|+|.+++..... ..+++..++.++.|++.||.|||++ +++||||||+||+++.++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGG--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCC
Confidence 3457899999999999999976422 2389999999999999999999999 8999999999999999999
Q ss_pred eEEeecccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHH
Q 007455 453 PHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNT 532 (603)
Q Consensus 453 ~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 532 (603)
+||+|||++........ .....|++.|+|||.+.+..++.++||||||+++|||++|..|+.... .+...
T Consensus 161 ~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--------~~~~~ 230 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS--------KFFTD 230 (284)
T ss_dssp EEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH--------HHHHH
T ss_pred EEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH--------HHHHH
Confidence 99999999987654322 234468999999999998889999999999999999999998863210 11111
Q ss_pred HhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCCCC
Q 007455 533 LLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCP 592 (603)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 592 (603)
. .. .. .+...+..+.+++.+||+.||++|||+.|+++.|+.....++.
T Consensus 231 ~-~~--------~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 231 L-RD--------GI---ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp H-HT--------TC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred h-hc--------cc---ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 1 11 11 1122345688999999999999999999999999987655544
No 182
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.9e-40 Score=338.78 Aligned_cols=257 Identities=23% Similarity=0.355 Sum_probs=202.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCCh-----------------HHHHHHHHHHHhhCCCCeeeec
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGS-----------------DQVFERELEILGSIKHINLVNL 372 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 372 (603)
.++|++.+.||+|+||.||+|.+ ++..||+|.+....... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788999999999999999999 77889999985432111 1679999999999999999999
Q ss_pred ceeeecCCccEEEEEecCCCCcccc------ccccCCCCccCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEEecCCCCCe
Q 007455 373 RGYCRLPATKLLIYDYLSMGSLDDF------LHEHGEGQQLLNWSARLKIALGSARGLAYLHH-DCCPKIIHRDIKSSNI 445 (603)
Q Consensus 373 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NI 445 (603)
++++.+.+..++||||+++|+|.++ +... ....+++..++.++.|++.||.|||+ . +++||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN--YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS--SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc--cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999999 5442 13448999999999999999999999 7 899999999999
Q ss_pred EECCCCCeEEeecccccccCCCCcceeecccccccccCccccccC-CCCc-ccchHhHHHHHHHHHhCCCCCCcccccCC
Q 007455 446 LLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG-RATE-KSDVYSFGVLLLELVTGKRPTDPTFVKRG 523 (603)
Q Consensus 446 ll~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~slG~vl~elltg~~p~~~~~~~~~ 523 (603)
+++.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||+|+++|||++|+.||......
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-- 258 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-- 258 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--
T ss_pred EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--
Confidence 9999999999999999876443 33456689999999999876 5666 999999999999999999999753210
Q ss_pred ccHhHHHHHHhhhCcchhhhc----------ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 524 LNVVGWMNTLLKENRLEDVID----------KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
......... ........ ..........+.++.+++.+||+.||++|||++|+++
T Consensus 259 ---~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 259 ---VELFNNIRT-KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ---HHHHHHHTS-CCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---HHHHHHHhc-cCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111111 11000000 0000001334568999999999999999999999987
No 183
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.8e-40 Score=340.66 Aligned_cols=252 Identities=15% Similarity=0.166 Sum_probs=203.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEE------ECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCC---CCeeeecceeeecCC
Q 007455 310 LEALDEEDVVGSGGFGTVYRMV------MNDCGTFAVKRIDRSREGSDQVFERELEILGSIK---HINLVNLRGYCRLPA 380 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~ 380 (603)
.++|.+.+.||+|+||.||+|. ...+..||||++... ....+.+|++++..++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 3578888999999999999994 334567999998653 3456788888888886 999999999999999
Q ss_pred ccEEEEEecCCCCccccccccCC-CCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC----------
Q 007455 381 TKLLIYDYLSMGSLDDFLHEHGE-GQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE---------- 449 (603)
Q Consensus 381 ~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---------- 449 (603)
..++||||+++|+|.+++..... ....+++..++.++.|+++||+|||++ +|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccccc
Confidence 99999999999999999975322 234499999999999999999999998 8999999999999998
Q ss_pred -CCCeEEeecccccccCC-CCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHh
Q 007455 450 -NLEPHVSDFGLAKLLVD-EEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVV 527 (603)
Q Consensus 450 -~~~~kl~DfG~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~ 527 (603)
++.+||+|||+++.+.. ..........||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----- 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----- 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence 89999999999976542 22333455679999999999999899999999999999999999999986432110
Q ss_pred HHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHhhcc
Q 007455 528 GWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDR-PSMNQVLQLLEQEV 587 (603)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R-Ps~~evl~~L~~~~ 587 (603)
.. +....... .....+.+++..|++.+|.+| |+++++.+.|++..
T Consensus 293 ---------~~----~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 293 ---------CK----PEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp ---------EE----ECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ---------ee----echhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 00 01111111 124567889999999999999 78888888887644
No 184
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.3e-40 Score=332.88 Aligned_cols=262 Identities=26% Similarity=0.386 Sum_probs=197.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC--CC--EEEEEEeCCCC---CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND--CG--TFAVKRIDRSR---EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKL 383 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~--~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 383 (603)
++|++.+.||+|+||.||+|.+.. +. .||+|+++... ....+.+.+|++++++++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 578889999999999999998642 22 48999886542 233467899999999999999999999997754 89
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
+|+||+++|+|.+++.... ..+++..+..++.|+++||.|||++ +++||||||+||+++.++.+||+|||++..
T Consensus 97 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 9999999999999997642 2388999999999999999999999 899999999999999999999999999987
Q ss_pred cCCCCcce--eecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcch
Q 007455 464 LVDEEAHV--TTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLE 540 (603)
Q Consensus 464 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (603)
........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ...........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~--- 241 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG------SQILHKIDKEG--- 241 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTSC---
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH------HHHHHHHHccC---
Confidence 75443321 223457788999999988889999999999999999999 9999865321 11111111111
Q ss_pred hhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCCCCc
Q 007455 541 DVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPCPS 593 (603)
Q Consensus 541 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 593 (603)
.....+...+.++.+++.+||..+|++|||++++++.|++........
T Consensus 242 -----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 289 (291)
T 1u46_A 242 -----ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA 289 (291)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred -----CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchhh
Confidence 011122345577999999999999999999999999999876544433
No 185
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.1e-39 Score=346.56 Aligned_cols=198 Identities=24% Similarity=0.343 Sum_probs=166.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCC-EEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecC-----Ccc
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCG-TFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLP-----ATK 382 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 382 (603)
++|++.+.||+|+||.||+|.+..++ .||||++...... ..+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 57888999999999999999987654 5999999754333 345788999999999999999999998766 568
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
|+||||+++ +|.+++.... .+++..+..++.||++||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 106 ~lv~e~~~~-~L~~~~~~~~----~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 106 YIVLEIADS-DLKKLFKTPI----FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp EEEEECCSE-EHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEecCCc-CHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 999999875 9999987643 389999999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCCc---------------------ceeecccccccccCcccc-ccCCCCcccchHhHHHHHHHHHhCCCCCC
Q 007455 463 LLVDEEA---------------------HVTTVVAGTFGYLAPEYL-QSGRATEKSDVYSFGVLLLELVTGKRPTD 516 (603)
Q Consensus 463 ~~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~vl~elltg~~p~~ 516 (603)
....... .......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 7654321 122456799999999986 56679999999999999999999766654
No 186
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.9e-40 Score=353.10 Aligned_cols=193 Identities=24% Similarity=0.341 Sum_probs=153.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeec-----CCcc
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRL-----PATK 382 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~~ 382 (603)
++|++.+.||+|+||.||+|.+. .+..||||++...... ..+.+.+|++++++++||||+++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57899999999999999999987 4567999999654333 34568899999999999999999999843 3568
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
|+||||+. |+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 133 ~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTPV----YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEECCCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEeccc-cchhhhcccCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 99999985 58999887643 389999999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCCc--------------------------ceeecccccccccCcccc-ccCCCCcccchHhHHHHHHHHHhC
Q 007455 463 LLVDEEA--------------------------HVTTVVAGTFGYLAPEYL-QSGRATEKSDVYSFGVLLLELVTG 511 (603)
Q Consensus 463 ~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~vl~elltg 511 (603)
....... .......||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 7643211 122345689999999976 566799999999999999999994
No 187
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3.9e-40 Score=367.48 Aligned_cols=249 Identities=22% Similarity=0.321 Sum_probs=206.2
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCC---CCChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccE
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRS---REGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKL 383 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 383 (603)
..++|++.++||+|+||.||+|.+..+ ..||||+++.. .....+.+..|..++..+ +||||+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 467899999999999999999998754 46999998643 223345678899999987 7999999999999999999
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
+||||+++|+|.+++...+. +++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 419 lV~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGR----FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99999999999999987543 89999999999999999999999 899999999999999999999999999986
Q ss_pred cCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 464 LVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 464 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+..
T Consensus 492 ~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~-------- 556 (674)
T 3pfq_A 492 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIME-------- 556 (674)
T ss_dssp CCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHS--------
T ss_pred cccCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH------HHHHHHHHh--------
Confidence 43322 234556799999999999999999999999999999999999999975321 111111111
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSM-----NQVLQ 581 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~-----~evl~ 581 (603)
.....+...+.++.+|+.+||+.||++||++ +|+++
T Consensus 557 --~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 557 --HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --SCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --CCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1122334456789999999999999999997 77763
No 188
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.4e-39 Score=335.07 Aligned_cols=253 Identities=28% Similarity=0.424 Sum_probs=202.7
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC--------hHHHHHHHHHHHhhC-CCCeeeecceeee
Q 007455 308 EKLEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG--------SDQVFERELEILGSI-KHINLVNLRGYCR 377 (603)
Q Consensus 308 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 377 (603)
...++|++.+.||+|+||.||+|.+. ++..||||++...... ..+.+.+|+.+++++ +||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34567999999999999999999987 5678999998654321 134578999999999 7999999999999
Q ss_pred cCCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEee
Q 007455 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSD 457 (603)
Q Consensus 378 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 457 (603)
.....++||||+++++|.+++..... +++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~~~----l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~D 243 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEKVA----LSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSD 243 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEe
Confidence 99999999999999999999976433 89999999999999999999998 899999999999999999999999
Q ss_pred cccccccCCCCcceeecccccccccCcccccc------CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHH
Q 007455 458 FGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS------GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMN 531 (603)
Q Consensus 458 fG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 531 (603)
||++........ .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... .....
T Consensus 244 fG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~~~~ 315 (365)
T 2y7j_A 244 FGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------ILMLR 315 (365)
T ss_dssp CTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHH
T ss_pred cCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH------HHHHH
Confidence 999987654332 234679999999998863 3578899999999999999999999965321 11111
Q ss_pred HHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 532 TLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.... ...... .+. ....+..+.+++.+||+.||++|||++|+++
T Consensus 316 ~i~~-~~~~~~-~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 316 MIME-GQYQFS-SPE----WDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHH-TCCCCC-HHH----HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHh-CCCCCC-Ccc----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 100000 000 0122456899999999999999999999987
No 189
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=7.3e-40 Score=339.82 Aligned_cols=262 Identities=24% Similarity=0.384 Sum_probs=202.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
++|++.+.||+|+||.||+|.+. .+..||+|++..... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 57888999999999999999987 456799999865432 2345689999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++|+|.+++..... +++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~L~~~l~~~~~----~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 185 (360)
T ss_dssp CTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-
T ss_pred CCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc-
Confidence 999999999987543 899999999999999999999842 7999999999999999999999999999765322
Q ss_pred cceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhH--------------------
Q 007455 469 AHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVG-------------------- 528 (603)
Q Consensus 469 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~-------------------- 528 (603)
......||+.|+|||++.+..++.++||||+|+++|||++|+.||.............
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 1234568999999999999899999999999999999999999997532110000000
Q ss_pred ---HHHHHhhhCcc----hhhhcccCCC-cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 529 ---WMNTLLKENRL----EDVIDKRCAD-ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 529 ---~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
+.......... ........+. .....+.++.+++.+||+.||++|||++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00000000000 0000111111 11234567999999999999999999999986
No 190
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.9e-39 Score=345.93 Aligned_cols=262 Identities=20% Similarity=0.265 Sum_probs=204.7
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCC-CeeeecceeeecCCccEEEEEe
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKH-INLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~ 388 (603)
++|++.+.||+|+||.||+|.+. .+..||||++...... ..+.+|+++++.+.| +++..+..++...+..++||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 57899999999999999999985 4567999987654332 247899999999987 4555666666778888999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE---CCCCCeEEeecccccccC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~~~~~~ 465 (603)
+ +++|.+++..... .+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 85 ~-g~sL~~ll~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 85 L-GPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp C-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred C-CCCHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 9 8899999975332 389999999999999999999999 89999999999999 588999999999998775
Q ss_pred CCCcc------eeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcc
Q 007455 466 DEEAH------VTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRL 539 (603)
Q Consensus 466 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (603)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........................
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI 237 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence 54321 123567999999999999999999999999999999999999999764322111111111111111111
Q ss_pred hhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC
Q 007455 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS 589 (603)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 589 (603)
.. ... ..+.++.+++..||+.+|++||+++++++.|++....
T Consensus 238 ~~----l~~----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 238 EA----LCR----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HH----HHT----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HH----Hhc----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 11 111 2245799999999999999999999999999886543
No 191
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-39 Score=337.12 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=192.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCC------c
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPA------T 381 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 381 (603)
++|+..+.||+|+||.||+|.+. .+..||||++...... ..+.+.+|+++++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 57888899999999999999986 4567999999654332 2456889999999999999999999997653 4
Q ss_pred cEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccc
Q 007455 382 KLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461 (603)
Q Consensus 382 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~ 461 (603)
.|+||||+ +++|.+++... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp CEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 59999999 77999998763 288999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCcceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhh-C-c
Q 007455 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE-N-R 538 (603)
Q Consensus 462 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~-~ 538 (603)
+..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ......... . .
T Consensus 176 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~l~~i~~~~g~~ 245 (367)
T 1cm8_A 176 RQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL------DQLKEIMKVTGTP 245 (367)
T ss_dssp EECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCCC
T ss_pred cccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHhcCCC
Confidence 875432 234568999999999876 67899999999999999999999999754211 111111000 0 0
Q ss_pred c------------hhhh-------cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 539 L------------EDVI-------DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 539 ~------------~~~~-------~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. ...+ ...........+..+.+|+.+||..||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 246 PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0 0000 00001111234567999999999999999999999997
No 192
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=328.26 Aligned_cols=254 Identities=20% Similarity=0.317 Sum_probs=199.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCC----CChHHHHHHHHHHHhhCCCCeeeecceeee--cCCcc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSR----EGSDQVFERELEILGSIKHINLVNLRGYCR--LPATK 382 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 382 (603)
.++|.+.+.||+|+||.||+|.+.. +..+|+|.+.... ......+.+|++++++++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 4689999999999999999999864 5579999986432 234567899999999999999999999984 45678
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
++||||++++ |.+++..... ..+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPE--KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTT--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhCcc--cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999986 7777765432 3489999999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCC-cceeecccccccccCccccccCC--CCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcc
Q 007455 463 LLVDEE-AHVTTVVAGTFGYLAPEYLQSGR--ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRL 539 (603)
Q Consensus 463 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (603)
...... ........|++.|+|||++.+.. ++.++||||+|+++|||++|+.||.... .......... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~-~-- 228 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLFENIGK-G-- 228 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHH-C--
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHhc-C--
Confidence 764322 22234456899999999987643 3779999999999999999999997532 1111111111 1
Q ss_pred hhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhh
Q 007455 540 EDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ--LLEQ 585 (603)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~--~L~~ 585 (603)
....+...+..+.+++.+||..||++|||++|+++ .+.+
T Consensus 229 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 269 (305)
T 2wtk_C 229 -------SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269 (305)
T ss_dssp -------CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHS
T ss_pred -------CCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCccccc
Confidence 11122234567899999999999999999999996 4544
No 193
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-39 Score=334.80 Aligned_cols=260 Identities=25% Similarity=0.348 Sum_probs=195.9
Q ss_pred HHhhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC-----hHHHHHHHHHHHhhCCCCeeeecceeeecCCc
Q 007455 308 EKLEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG-----SDQVFERELEILGSIKHINLVNLRGYCRLPAT 381 (603)
Q Consensus 308 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 381 (603)
...++|++.+.||+|+||.||+|.+.. +..||||++...... ..+.+.+|+++++.++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 446789999999999999999999874 567999998643221 12457899999999999999999999999999
Q ss_pred cEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccc
Q 007455 382 KLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461 (603)
Q Consensus 382 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~ 461 (603)
.++||||+++ +|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred eEEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 9999999987 8888887543 2378889999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCcceeecccccccccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhh---C
Q 007455 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQSG-RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE---N 537 (603)
Q Consensus 462 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~ 537 (603)
+....... ......||+.|+|||++.+. .++.++||||+|+++|||++|..||..... .......... .
T Consensus 160 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~------~~~~~~i~~~~~~~ 232 (346)
T 1ua2_A 160 KSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD------LDQLTRIFETLGTP 232 (346)
T ss_dssp STTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCC
T ss_pred eeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHHHcCCC
Confidence 87654322 23345689999999998654 578999999999999999999999865321 1111111110 0
Q ss_pred ---cchhh------hc-ccCCCcC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 538 ---RLEDV------ID-KRCADAD-----METVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 538 ---~~~~~------~~-~~~~~~~-----~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.+... +. ...+..+ ...+.++.+++.+||..||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 233 TEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp CTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000 00 0000011 233467999999999999999999999997
No 194
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.7e-40 Score=353.76 Aligned_cols=250 Identities=24% Similarity=0.346 Sum_probs=203.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC---CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR---EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+. .+..||||++.... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357888999999999999999987 55679999985432 33456799999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE---CCCCCeEEeeccccc
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL---DENLEPHVSDFGLAK 462 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~~~ 462 (603)
|||+.+|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHTCSC----CBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999998876543 89999999999999999999999 89999999999999 567899999999998
Q ss_pred ccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 463 LLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 463 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
.+..... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......... .....
T Consensus 178 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~-~~~~~- 246 (484)
T 3nyv_A 178 HFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE------YDILKKVEK-GKYTF- 246 (484)
T ss_dssp HBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH-CCCCC-
T ss_pred Ecccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHc-CCCCC-
Confidence 7654332 234569999999999876 689999999999999999999999975321 111111111 11000
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. .......+.++.+++.+||+.+|++|||++|+++
T Consensus 247 ---~-~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 247 ---E-LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp ---C-SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---C-CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 0 0111234567999999999999999999999995
No 195
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1e-39 Score=334.62 Aligned_cols=262 Identities=26% Similarity=0.420 Sum_probs=198.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCCh--HHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGS--DQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
.++|++.+.||+|+||.||+|.+.. +..||+|++....... .+.+.+|+.++++++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 5688999999999999999999875 5679999986544332 355789999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||+++++|.++...... +++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++....
T Consensus 104 e~~~~~~l~~~~~~~~~----~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLELFPNG----LDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHHSTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHhhccC----CCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 99999999887665433 89999999999999999999999 899999999999999999999999999986644
Q ss_pred CCcceeecccccccccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHH----------HHHhh
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQSG-RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWM----------NTLLK 535 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~----------~~~~~ 535 (603)
... ......||+.|+|||++.+. .++.++||||+|+++|||++|+.||....... ...... .....
T Consensus 177 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 253 (331)
T 4aaa_A 177 PGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID--QLYHIMMCLGNLIPRHQELFN 253 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHH
T ss_pred Ccc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHHHhCCCChhhhhHhh
Confidence 322 22345689999999998765 68899999999999999999999997542110 000000 00000
Q ss_pred hCc-chhhhcccCCC------cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 536 ENR-LEDVIDKRCAD------ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 536 ~~~-~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
... ......+.... .....+..+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 00000000000 01134567999999999999999999999986
No 196
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.7e-39 Score=332.34 Aligned_cols=253 Identities=20% Similarity=0.288 Sum_probs=199.2
Q ss_pred hhCCCCC-CeeeecCCeEEEEEEECC-CCEEEEEEeCCCCC--ChHHHHHHHHHHHhhCC-CCeeeecceeeecCCccEE
Q 007455 310 LEALDEE-DVVGSGGFGTVYRMVMND-CGTFAVKRIDRSRE--GSDQVFERELEILGSIK-HINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 310 ~~~~~~~-~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 384 (603)
.+.|.+. +.||+|+||.||+|.+.. +..||+|++..... .....+.+|+.++..+. ||||+++++++...+..++
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l 106 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence 3456665 889999999999999874 56799999865432 23567899999999995 6999999999999999999
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC---CCCeEEeecccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE---NLEPHVSDFGLA 461 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG~~ 461 (603)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a 181 (327)
T 3lm5_A 107 ILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181 (327)
T ss_dssp EEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGC
T ss_pred EEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccc
Confidence 999999999999986532 23489999999999999999999999 8999999999999998 789999999999
Q ss_pred cccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchh
Q 007455 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541 (603)
Q Consensus 462 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (603)
+....... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ..........
T Consensus 182 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~---- 249 (327)
T 3lm5_A 182 RKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ------ETYLNISQVN---- 249 (327)
T ss_dssp EEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC----
T ss_pred cccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch------HHHHHHHhcc----
Confidence 87644322 23456999999999999899999999999999999999999999653211 1111111000
Q ss_pred hhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 542 VIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 542 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
...........+..+.+++.+||+.||++|||++|+++
T Consensus 250 --~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 250 --VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp --CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 00011112234567999999999999999999999986
No 197
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.3e-39 Score=351.43 Aligned_cols=250 Identities=24% Similarity=0.345 Sum_probs=201.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCC--CCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRS--REGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
.++|++.+.||+|+||+||+|.+. .+..||||++... .......+.+|++++++++||||+++++++......++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467899999999999999999987 4567999998532 2334567899999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEEC---CCCCeEEeecccccc
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD---ENLEPHVSDFGLAKL 463 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfG~~~~ 463 (603)
||+.+|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~~~~----~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999998876543 89999999999999999999999 899999999999995 456799999999987
Q ss_pred cCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 464 LVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 464 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
..... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......... .....
T Consensus 174 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~-~~~~~-- 241 (486)
T 3mwu_A 174 FQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRVET-GKYAF-- 241 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH-TCCCS--
T ss_pred CCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHh-CCCCC--
Confidence 64432 2334569999999999875 589999999999999999999999965321 111111111 11000
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. .......+.++.+++.+||+.+|++|||+.|+++
T Consensus 242 --~-~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 242 --D-LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp --C-SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred --C-CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 0011234567999999999999999999999997
No 198
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2e-39 Score=351.61 Aligned_cols=250 Identities=24% Similarity=0.306 Sum_probs=199.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCCCC-------------ChHHHHHHHHHHHhhCCCCeeeeccee
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRSRE-------------GSDQVFERELEILGSIKHINLVNLRGY 375 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~~ 375 (603)
.++|.+.+.||+|+||+||+|.+..+ ..||+|++..... ...+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 46788899999999999999998754 5799999865321 234678999999999999999999999
Q ss_pred eecCCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC---C
Q 007455 376 CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL---E 452 (603)
Q Consensus 376 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~ 452 (603)
+.+....++||||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||+++.++ .
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHK----FDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 9999999999999999999999876543 89999999999999999999999 899999999999998876 6
Q ss_pred eEEeecccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHH
Q 007455 453 PHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNT 532 (603)
Q Consensus 453 ~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 532 (603)
+||+|||+++...... ......||+.|+|||++. +.++.++||||+|+++|+|++|+.||..... ......
T Consensus 188 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~ 258 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND------QDIIKK 258 (504)
T ss_dssp EEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH
T ss_pred EEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHH
Confidence 9999999998765432 234456999999999987 4689999999999999999999999975321 111111
Q ss_pred HhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 533 LLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
... ....... ......+.++.+++.+||..||.+|||++|+++
T Consensus 259 i~~-~~~~~~~-----~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 259 VEK-GKYYFDF-----NDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHH-CCCCCCH-----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHc-CCCCCCc-----cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111 1100000 000123467999999999999999999999985
No 199
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.4e-39 Score=351.88 Aligned_cols=250 Identities=25% Similarity=0.336 Sum_probs=197.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCC--CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSR--EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
.+.|++.+.||+|+||+||+|.+.. +..||+|++.... ......+.+|+.+++.++||||+++++++......++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 3568889999999999999999874 4579999986543 333567899999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCC---CCeEEeecccccc
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDEN---LEPHVSDFGLAKL 463 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfG~~~~ 463 (603)
||+++|+|.+++..... +++..+..++.|++.||.|||++ +|+||||||+|||++.. +.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIHRMK----FNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999998876543 89999999999999999999999 89999999999999764 4599999999987
Q ss_pred cCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 464 LVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 464 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
..... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... .......... ....
T Consensus 189 ~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~-~~~~-- 256 (494)
T 3lij_A 189 FENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD------QEILRKVEKG-KYTF-- 256 (494)
T ss_dssp CBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHT-CCCC--
T ss_pred CCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhC-CCCC--
Confidence 65432 234456999999999986 4689999999999999999999999975321 1111111111 1000
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. .......+..+.+++.+||+.+|++|||++|+++
T Consensus 257 ~---~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 257 D---SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp C---SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred C---chhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 0 0011134467999999999999999999999985
No 200
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.6e-39 Score=323.39 Aligned_cols=246 Identities=26% Similarity=0.403 Sum_probs=195.6
Q ss_pred CCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCCCC--ChHHHHHHHHHHHhhCCCCeeeecceeeec----CCccEE
Q 007455 312 ALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRSRE--GSDQVFERELEILGSIKHINLVNLRGYCRL----PATKLL 384 (603)
Q Consensus 312 ~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 384 (603)
.|.+.+.||+|+||.||+|.+..+ ..||+|.+..... ...+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 466678899999999999998754 4699998865432 234568899999999999999999998865 355799
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEecCCCCCeEEC-CCCCeEEeecccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK--IIHRDIKSSNILLD-ENLEPHVSDFGLA 461 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~DfG~~ 461 (603)
||||+++|+|.+++..... +++..++.++.|++.||.|||+. + ++||||||+||+++ .++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFKV----MKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEecCCCCHHHHHHHccC----CCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 9999999999999986543 89999999999999999999998 6 99999999999998 7899999999999
Q ss_pred cccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchh
Q 007455 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541 (603)
Q Consensus 462 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (603)
....... .....||+.|+|||++.+ .++.++||||+|+++|+|++|+.||.... .............. ..
T Consensus 180 ~~~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~-~~ 249 (290)
T 1t4h_A 180 TLKRASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVTSGVK-PA 249 (290)
T ss_dssp GGCCTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHTTTCC-CG
T ss_pred ccccccc---cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC-----cHHHHHHHHhccCC-cc
Confidence 7654332 234568999999998874 58999999999999999999999996432 11111111111111 00
Q ss_pred hhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 542 VIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 542 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..+...+.++.+++.+||+.||++|||++|+++
T Consensus 250 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 250 -------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 011222357999999999999999999999986
No 201
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=337.36 Aligned_cols=254 Identities=24% Similarity=0.338 Sum_probs=186.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCC-CCeeeecceeee--------cCC
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIK-HINLVNLRGYCR--------LPA 380 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~~~ 380 (603)
.+|++.+.||+|+||.||+|.+. .+..||||++........+.+.+|+.++.++. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 46888899999999999999986 45679999986655555667899999999996 999999999984 334
Q ss_pred ccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eEEecCCCCCeEECCCCCeEEeec
Q 007455 381 TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPK--IIHRDIKSSNILLDENLEPHVSDF 458 (603)
Q Consensus 381 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Df 458 (603)
..++||||+. |+|.+++..... ...+++..++.++.|++.||+|||++ + |+||||||+|||++.++.+||+||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred eEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecC
Confidence 4789999997 599998875322 22389999999999999999999998 7 999999999999999999999999
Q ss_pred ccccccCCCCcc-----------eeecccccccccCcccc---ccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCc
Q 007455 459 GLAKLLVDEEAH-----------VTTVVAGTFGYLAPEYL---QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGL 524 (603)
Q Consensus 459 G~~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~ 524 (603)
|+++........ ......||+.|+|||++ .+..++.++||||||+++|||++|+.||.......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-- 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--
Confidence 999876543221 11234589999999998 56678899999999999999999999986432110
Q ss_pred cHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 525 NVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
... ... . .......+..+.+++.+||+.||++|||++|+++.|+...
T Consensus 261 ----~~~-----~~~----~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 261 ----IVN-----GKY----S---IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp --------------C----C---CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----hhc-----Ccc----c---CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 000 000 0 0011122245889999999999999999999999998754
No 202
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.4e-39 Score=336.47 Aligned_cols=262 Identities=23% Similarity=0.326 Sum_probs=197.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC--CChHHHHHHHHHHHhhCCCCeeeecceeeec--------
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR--EGSDQVFERELEILGSIKHINLVNLRGYCRL-------- 378 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 378 (603)
.++|++.+.||+|+||.||+|.+. ++..||+|++.... ......+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 478999999999999999999985 55679999985443 2234568899999999999999999999876
Q ss_pred CCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeec
Q 007455 379 PATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDF 458 (603)
Q Consensus 379 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 458 (603)
.+..++||||+++ +|.+.+..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 3467999999986 77776665322 389999999999999999999999 8999999999999999999999999
Q ss_pred ccccccCCCC---cceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHh
Q 007455 459 GLAKLLVDEE---AHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLL 534 (603)
Q Consensus 459 G~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 534 (603)
|+++.+.... ........||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... .....+....
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~i~~~~ 245 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ---HQLALISQLC 245 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHH
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHh
Confidence 9998764322 122344568999999998875 45799999999999999999999999754211 1111111111
Q ss_pred hhC---cchhh--------hcccCC-CcCH-------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 535 KEN---RLEDV--------IDKRCA-DADM-------ETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 535 ~~~---~~~~~--------~~~~~~-~~~~-------~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
... ..... +..... .... ..+..+.+|+.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 246 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 000 00000 000000 0000 11356889999999999999999999997
No 203
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3e-39 Score=329.84 Aligned_cols=251 Identities=23% Similarity=0.348 Sum_probs=195.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCCCC--------ChHHHHHHHHHHHhhCCCCeeeecceeeecCC
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRSRE--------GSDQVFERELEILGSIKHINLVNLRGYCRLPA 380 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 380 (603)
.++|.+.+.||+|+||.||+|.+..+ ..||||.+..... .....+.+|++++++++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 35788999999999999999998754 5699999864321 12234789999999999999999999987654
Q ss_pred ccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC---eEEee
Q 007455 381 TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE---PHVSD 457 (603)
Q Consensus 381 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~D 457 (603)
.++||||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 899999999999999887643 389999999999999999999999 8999999999999987665 99999
Q ss_pred cccccccCCCCcceeecccccccccCccccc---cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHh
Q 007455 458 FGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ---SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLL 534 (603)
Q Consensus 458 fG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 534 (603)
||+++...... ......||+.|+|||++. ...++.++||||||+++|||++|+.||...... .......
T Consensus 161 fg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~---- 232 (322)
T 2ycf_A 161 FGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLKDQI---- 232 (322)
T ss_dssp CTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS--SCHHHHH----
T ss_pred Cccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH--HHHHHHH----
Confidence 99998764332 223456899999999873 467889999999999999999999999753221 1111111
Q ss_pred hhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
...... ..+......+.++.+++.+||..||++|||++|+++
T Consensus 233 ~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 233 TSGKYN-----FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHTCCC-----CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhCccc-----cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 111100 000001123467999999999999999999999984
No 204
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.6e-39 Score=328.64 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=198.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
.+.|++.+.||+|+||.||+|.+.. +..+|+|.+........+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 3678889999999999999999875 567999999776666667899999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++++|.+++..... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~l~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 170 (302)
T 2j7t_A 98 CPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT- 170 (302)
T ss_dssp CTTEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-
T ss_pred CCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc-
Confidence 999999998875322 389999999999999999999999 8999999999999999999999999987543211
Q ss_pred cceeecccccccccCcccc-----ccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 469 AHVTTVVAGTFGYLAPEYL-----QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 469 ~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
........|++.|+|||++ ....++.++||||||+++|||++|+.||..... ............
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~----- 239 (302)
T 2j7t_A 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSDP----- 239 (302)
T ss_dssp HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSCC-----
T ss_pred ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH------HHHHHHHhccCC-----
Confidence 1112334689999999988 356788999999999999999999999875321 111111111110
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.....+...+.++.+++.+||+.||++|||++|+++
T Consensus 240 --~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 240 --PTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --CCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --cccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 001112334567999999999999999999999986
No 205
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.3e-39 Score=362.06 Aligned_cols=256 Identities=22% Similarity=0.344 Sum_probs=203.3
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCC----CEEEEEEeCCCCCC-hHHHHHHHHHHHhhCCCCeeeecceeeecCCccEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDC----GTFAVKRIDRSREG-SDQVFERELEILGSIKHINLVNLRGYCRLPATKLL 384 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 384 (603)
.++|++.+.||+|+||.||+|.+..+ ..||+|.+...... ..+.+.+|+.++++++||||+++++++. .+..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 46788889999999999999998532 35899988654332 3367899999999999999999999985 467899
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
||||+++|+|.+++.... ..+++..++.++.|+++||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 468 v~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEECCTTCBHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEcCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 999999999999998643 2389999999999999999999999 8999999999999999999999999999877
Q ss_pred CCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCcchhhh
Q 007455 465 VDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVI 543 (603)
Q Consensus 465 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (603)
............+++.|+|||++.+..++.++||||||+++|||++ |..||..... ..........
T Consensus 542 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~------~~~~~~i~~~------- 608 (656)
T 2j0j_A 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN------NDVIGRIENG------- 608 (656)
T ss_dssp CC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHHT-------
T ss_pred CCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHcC-------
Confidence 5544333444557789999999998899999999999999999997 8999865321 1111111111
Q ss_pred cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcc
Q 007455 544 DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEV 587 (603)
Q Consensus 544 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 587 (603)
.....+...+..+.+++.+||..||++|||++|+++.|+++.
T Consensus 609 --~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 609 --ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 111223345578999999999999999999999999998754
No 206
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=328.38 Aligned_cols=250 Identities=25% Similarity=0.384 Sum_probs=199.1
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEEe
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYDY 388 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 388 (603)
.+.|++.+.||+|+||.||+|.+.. +..||+|.+.... ....+.+|+.++++++||||+++++++...+..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 4678889999999999999999875 5679999986543 345689999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCC
Q 007455 389 LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEE 468 (603)
Q Consensus 389 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~ 468 (603)
+++|+|.+++.... ..+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 106 ~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 106 CGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp CTTEEHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred CCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 99999999987432 2389999999999999999999999 89999999999999999999999999998765432
Q ss_pred cceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCC
Q 007455 469 AHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCA 548 (603)
Q Consensus 469 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (603)
. ......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ...... ..... ...
T Consensus 180 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~-~~~~~------~~~ 245 (314)
T 3com_A 180 A-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM------RAIFMI-PTNPP------PTF 245 (314)
T ss_dssp S-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHH-HHSCC------CCC
T ss_pred c-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH------HHHHHH-hcCCC------ccc
Confidence 2 223456899999999999888999999999999999999999998653210 000000 00100 000
Q ss_pred CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 549 DADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 549 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..+...+..+.+++.+||..||.+|||++++++
T Consensus 246 ~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 112234567999999999999999999999985
No 207
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.6e-39 Score=335.87 Aligned_cols=255 Identities=21% Similarity=0.272 Sum_probs=190.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecCC------
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLPA------ 380 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 380 (603)
.++|++.+.||+|+||.||+|.+.. +..||||++...... ..+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 3578889999999999999999874 456999998654322 3356889999999999999999999997665
Q ss_pred ccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccc
Q 007455 381 TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGL 460 (603)
Q Consensus 381 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 460 (603)
..++||||+++ +|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 67999999986 78777753 278999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHH-------
Q 007455 461 AKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTL------- 533 (603)
Q Consensus 461 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~------- 533 (603)
++...... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ..+....
T Consensus 174 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~i~~~~~~~~ 246 (371)
T 2xrw_A 174 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-----DQWNKVIEQLGTPC 246 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHC-CCCCC
T ss_pred cccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCC
Confidence 98654322 233456899999999999889999999999999999999999999753211 1111000
Q ss_pred --------------hhhC------cchhhhcccCCC----cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 534 --------------LKEN------RLEDVIDKRCAD----ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 534 --------------~~~~------~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.... .+...+...... .....+.++.+|+.+||..||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 247 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000 000000000000 11233678999999999999999999999996
No 208
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.5e-39 Score=337.66 Aligned_cols=265 Identities=21% Similarity=0.279 Sum_probs=195.5
Q ss_pred HHHHHhhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCCh-----------HHHHHHHHHHHhhCCCCeeeecc
Q 007455 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGS-----------DQVFERELEILGSIKHINLVNLR 373 (603)
Q Consensus 305 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l~ 373 (603)
++....++|.+.+.||+|+||.||+|.+.++..||||++....... .+.+.+|++++++++||||++++
T Consensus 16 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 95 (362)
T 3pg1_A 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLR 95 (362)
T ss_dssp HHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred HHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcccee
Confidence 4555678999999999999999999999888899999985432211 26789999999999999999999
Q ss_pred eeeec-----CCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEEC
Q 007455 374 GYCRL-----PATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD 448 (603)
Q Consensus 374 ~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 448 (603)
+++.. ....++||||+.+ +|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++
T Consensus 96 ~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 96 DIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQR---IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA 168 (362)
T ss_dssp EEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred eeEEeccCCCcceEEEEEccCCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc
Confidence 99844 3357999999984 8888877532 2489999999999999999999999 899999999999999
Q ss_pred CCCCeEEeecccccccCCCCcceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHh
Q 007455 449 ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVV 527 (603)
Q Consensus 449 ~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~ 527 (603)
.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... ...
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~ 243 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY---NQL 243 (362)
T ss_dssp TTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHH
T ss_pred CCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH---HHH
Confidence 99999999999997543322 2234568999999999876 67899999999999999999999999753211 011
Q ss_pred HHHHHHhhhCc-----------chhhhcccCCC--------cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 528 GWMNTLLKENR-----------LEDVIDKRCAD--------ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 528 ~~~~~~~~~~~-----------~~~~~~~~~~~--------~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
........... ..+.+...... .....+..+.+++.+||+.||++|||++|+++
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 00100000000 00001000000 11223467899999999999999999999996
No 209
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.5e-39 Score=324.82 Aligned_cols=259 Identities=22% Similarity=0.337 Sum_probs=199.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCC--ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSRE--GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
+++|++.+.||+|+||.||+|.+. ++..||||++..... .....+.+|+.++++++||||+++++++..++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 467888999999999999999987 556799999865432 22356889999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||+. |+|.+++..... ..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 82 e~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp ECCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred Eccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 9998 599999876532 2378999999999999999999999 899999999999999999999999999977643
Q ss_pred CCcceeecccccccccCccccccCC-CCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhh-Ccchhh--
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQSGR-ATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE-NRLEDV-- 542 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 542 (603)
... ......+|+.|+|||.+.+.. ++.++||||||+++|||++|+.||...... ......... ......
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~ 228 (299)
T 2r3i_A 156 PVR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------DQLFRIFRTLGTPDEVVW 228 (299)
T ss_dssp CSB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCTTTS
T ss_pred Ccc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHHHhCCCchhhh
Confidence 221 123345899999999987755 789999999999999999999999754211 111111110 000000
Q ss_pred --------hcccCCC--------cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 543 --------IDKRCAD--------ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 543 --------~~~~~~~--------~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.....+. .....+.++.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 01123467899999999999999999999997
No 210
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6e-40 Score=331.71 Aligned_cols=263 Identities=24% Similarity=0.361 Sum_probs=185.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC-CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR-EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
.++|++.+.||+|+||.||+|.+. ++..||||.+.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 468899999999999999999975 45679999886432 2334568899999999999999999999999999999999
Q ss_pred ecCCCCccccccccC----CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 388 YLSMGSLDDFLHEHG----EGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
|+++|+|.+++.... .....+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 999999999987421 1123489999999999999999999999 899999999999999999999999999876
Q ss_pred cCCCCc----ceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCc
Q 007455 464 LVDEEA----HVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR 538 (603)
Q Consensus 464 ~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 538 (603)
...... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... ..........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~~ 244 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK------VLMLTLQNDP 244 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG------HHHHHHTSSC
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh------HHHHHhccCC
Confidence 643221 11234568999999999865 568899999999999999999999997532111 1111111110
Q ss_pred chhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 539 LEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
................+.++.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 245 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0000000000111233467899999999999999999999986
No 211
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.2e-39 Score=327.33 Aligned_cols=254 Identities=24% Similarity=0.341 Sum_probs=187.0
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCCh--HHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS--DQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
.++|++.+.||+|+||.||+|.+. +++.||+|++....... .+.+.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467888999999999999999986 45569999996543222 223445555688889999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||+++ +|.+++.........+++..++.++.|++.||+|||++. +++||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99985 888877653333345899999999999999999999963 799999999999999999999999999987644
Q ss_pred CCcceeecccccccccCcccc----ccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 467 EEAHVTTVVAGTFGYLAPEYL----QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
... .....||+.|+|||++ .+..++.++||||+|+++|||++|+.||.... ... ...........
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~-~~~~~~~~~~~---- 231 (290)
T 3fme_A 163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG----TPF-QQLKQVVEEPS---- 231 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS----CHH-HHHHHHHHSCC----
T ss_pred ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC----chH-HHHHHHhccCC----
Confidence 322 2334689999999996 55678899999999999999999999996421 111 11111111110
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
........+.++.+++.+||+.+|++|||++|+++
T Consensus 232 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 ----PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ----CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ----CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11112234567999999999999999999999987
No 212
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.1e-39 Score=332.85 Aligned_cols=259 Identities=24% Similarity=0.337 Sum_probs=198.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCCCCC-hHHHHHHHHHHHhhCCCCeeeecceeeecC-----CccE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRSREG-SDQVFERELEILGSIKHINLVNLRGYCRLP-----ATKL 383 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 383 (603)
.+|++.+.||+|+||.||+|.+..+ ..||||++...... ..+.+.+|++++++++||||+++++++... ...+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 4788899999999999999998754 46999999754332 236688999999999999999999998654 3679
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
+||||+.+ +|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 107 iv~e~~~~-~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 107 IVQDLMET-DLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp EEEECCSE-EHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEcccCc-CHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 99999985 999988753 289999999999999999999999 899999999999999999999999999987
Q ss_pred cCCCCcce--eecccccccccCccccc-cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcch
Q 007455 464 LVDEEAHV--TTVVAGTFGYLAPEYLQ-SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLE 540 (603)
Q Consensus 464 ~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (603)
........ .....||+.|+|||++. +..++.++||||+|+++|||++|+.||...... .....+..........
T Consensus 178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL---DQLNHILGILGSPSQE 254 (364)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG---GHHHHHHHHHCSCCHH
T ss_pred cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH---HHHHHHHHHhCCCCHH
Confidence 65432221 23457999999999865 445899999999999999999999999754321 1111111110000000
Q ss_pred -----------hhh----cccCCC---cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 541 -----------DVI----DKRCAD---ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 541 -----------~~~----~~~~~~---~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
... ...... .....+.++.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 000000 01123467899999999999999999999996
No 213
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=7.4e-40 Score=333.74 Aligned_cols=266 Identities=24% Similarity=0.396 Sum_probs=198.5
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCC--ChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE--GSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
.++|++.+.||+|+||.||+|.+.+ .+|+|+++.... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4678899999999999999999865 599998864322 223457889999999999999999999999999999999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCC
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDE 467 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~ 467 (603)
|+++++|.+++.... ..+++..++.++.|++.||+|||++ +++||||||+||+++ ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~ 182 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL 182 (319)
T ss_dssp CCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred cccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence 999999999997643 2388999999999999999999999 899999999999998 679999999998765321
Q ss_pred C----cceeecccccccccCcccccc---------CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHh
Q 007455 468 E----AHVTTVVAGTFGYLAPEYLQS---------GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLL 534 (603)
Q Consensus 468 ~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 534 (603)
. ........|++.|+|||++.+ ..++.++||||||+++|||++|+.||..... ........
T Consensus 183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~ 256 (319)
T 2y4i_B 183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA------EAIIWQMG 256 (319)
T ss_dssp -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH------HHHHHHHH
T ss_pred cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHhc
Confidence 1 112233458999999999864 3578899999999999999999999875321 11111111
Q ss_pred hhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccC----CCCcccccc
Q 007455 535 KENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMS----PCPSDFYES 598 (603)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~----~~~~~~~~~ 598 (603)
. .. .... .....+.++.+++.+||..+|++|||++++++.|+++... +.+..||.+
T Consensus 257 ~-~~-----~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~~~~~~~ 316 (319)
T 2y4i_B 257 T-GM-----KPNL--SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPGHFWKS 316 (319)
T ss_dssp T-TC-----CCCC--CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----------------
T ss_pred c-CC-----CCCC--CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCCcccccc
Confidence 1 10 0000 1112345689999999999999999999999999986533 444455543
No 214
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=5.4e-39 Score=340.63 Aligned_cols=197 Identities=24% Similarity=0.314 Sum_probs=170.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCCCCChHHHHHHHHHHHhhC------CCCeeeecceeeecCCccE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRSREGSDQVFERELEILGSI------KHINLVNLRGYCRLPATKL 383 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~~ 383 (603)
.+|++.+.||+|+||.||+|.+..+ ..||||++.... .....+.+|+++++.+ .|+||+++++++......+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 5688899999999999999998764 569999986532 2345678888888877 5779999999999999999
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC--eEEeecccc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE--PHVSDFGLA 461 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfG~~ 461 (603)
+||||+. ++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 176 lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 9999997 599998886542 2389999999999999999999999 8999999999999999987 999999999
Q ss_pred cccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcc
Q 007455 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPT 518 (603)
Q Consensus 462 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~ 518 (603)
+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 250 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 250 CYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 765332 23456899999999999989999999999999999999999999754
No 215
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.3e-39 Score=324.76 Aligned_cols=251 Identities=25% Similarity=0.396 Sum_probs=202.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCC---------ChHHHHHHHHHHHhhCC-CCeeeecceeeec
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSRE---------GSDQVFERELEILGSIK-HINLVNLRGYCRL 378 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 378 (603)
.++|++.+.||+|+||.||+|.+.. +..||||.+..... ...+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 4688899999999999999999875 45699999865431 11345789999999995 9999999999999
Q ss_pred CCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeec
Q 007455 379 PATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDF 458 (603)
Q Consensus 379 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 458 (603)
....++||||+++++|.+++..... +++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKVT----LSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 9999999999999999999986533 89999999999999999999999 8999999999999999999999999
Q ss_pred ccccccCCCCcceeecccccccccCccccc------cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHH
Q 007455 459 GLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ------SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNT 532 (603)
Q Consensus 459 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 532 (603)
|++........ .....|++.|+|||++. ...++.++||||||+++|||++|+.||..... ......
T Consensus 169 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~ 240 (298)
T 1phk_A 169 GFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------MLMLRM 240 (298)
T ss_dssp TTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH
T ss_pred cchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------HHHHHH
Confidence 99987654322 23456899999999885 45678899999999999999999999864321 111111
Q ss_pred HhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 533 LLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..... .. .........+..+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~-~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 241 IMSGN-YQ-----FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHTC-CC-----CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HhcCC-cc-----cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11111 00 000111234567999999999999999999999986
No 216
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.6e-39 Score=334.41 Aligned_cols=253 Identities=25% Similarity=0.376 Sum_probs=197.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC-hHHHHHHHHHH-HhhCCCCeeeecceeeecCCccEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG-SDQVFERELEI-LGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
.++|++.+.||+|+||.||+|.+. ++..||||++...... ....+..|..+ ++.++||||+++++++..++..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 356788899999999999999986 4556999999754333 33445566665 77889999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||+++ +|.+++.........+++..++.++.|++.||+|||++. +|+||||||+||+++.++.+||+|||+++....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99986 998888753223345899999999999999999999852 799999999999999999999999999987643
Q ss_pred CCcceeecccccccccCccccc----cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQ----SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
.. ......||+.|+|||++. ...++.++||||||+++|||++|+.||..... ...........
T Consensus 207 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~------ 273 (340)
T 3an0_A 207 SV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEE------ 273 (340)
T ss_dssp HH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHS------
T ss_pred cc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc-----hHHHHHHHhcC------
Confidence 21 123346899999999964 34688999999999999999999999974211 11111111111
Q ss_pred hcccCCC-cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 543 IDKRCAD-ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 543 ~~~~~~~-~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..+. .....+.++.+++.+||..||++|||++|+++
T Consensus 274 ---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 274 ---PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ---CCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1111 11234567999999999999999999999986
No 217
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=7.9e-40 Score=339.80 Aligned_cols=255 Identities=25% Similarity=0.341 Sum_probs=180.2
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCCCCeeeecceeeecC------Cc
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG--SDQVFERELEILGSIKHINLVNLRGYCRLP------AT 381 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 381 (603)
++|++.+.||+|+||.||+|.+.. +..||||++...... ..+.+.+|+++++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 578889999999999999999875 456999998654332 345688999999999999999999998654 56
Q ss_pred cEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccc
Q 007455 382 KLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461 (603)
Q Consensus 382 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~ 461 (603)
.++|+||+ +++|.+++... .+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 109 ~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CEEEEECC-CEECC-----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC----
T ss_pred EEEEeccc-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 79999999 67999988752 389999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCc--
Q 007455 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR-- 538 (603)
Q Consensus 462 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 538 (603)
+..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+........
T Consensus 180 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~l~~i~~~~g~p~~~ 252 (367)
T 2fst_X 180 RHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI---DQLKLILRLVGTPGAE 252 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCSCCHH
T ss_pred cccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHH
Confidence 865432 234568999999999876 67899999999999999999999999753211 11111111000000
Q ss_pred ---------chhhhcc--cCCCcC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 539 ---------LEDVIDK--RCADAD-----METVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 539 ---------~~~~~~~--~~~~~~-----~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
....+.. ..+... ...+..+.+|+.+||..||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0000000 000000 123467899999999999999999999986
No 218
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-39 Score=338.68 Aligned_cols=260 Identities=21% Similarity=0.286 Sum_probs=194.9
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecC--------
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLP-------- 379 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 379 (603)
..++|++.+.||+|+||.||+|.+. .+..||||++...... ..+|+++++.++||||+++++++...
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 80 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP 80 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence 4568899999999999999999986 4567999998654332 34799999999999999999998443
Q ss_pred ------------------------------CccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHh
Q 007455 380 ------------------------------ATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHH 429 (603)
Q Consensus 380 ------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~ 429 (603)
...++||||+++ +|.+.+.........+++..+..++.|+++||+|||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 159 (383)
T 3eb0_A 81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS 159 (383)
T ss_dssp -----------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 337899999995 8887776533333458999999999999999999999
Q ss_pred CCCCCeEEecCCCCCeEEC-CCCCeEEeecccccccCCCCcceeecccccccccCccccccC-CCCcccchHhHHHHHHH
Q 007455 430 DCCPKIIHRDIKSSNILLD-ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG-RATEKSDVYSFGVLLLE 507 (603)
Q Consensus 430 ~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~vl~e 507 (603)
. +|+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+||++||
T Consensus 160 ~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 160 L---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp T---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred C---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 8 899999999999997 688999999999987654332 2345689999999998764 48999999999999999
Q ss_pred HHhCCCCCCcccccCCccHhHHHHHHhhhCcchhh----------hcccCCC------cCHHHHHHHHHHHHHcccCCCC
Q 007455 508 LVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV----------IDKRCAD------ADMETVEAILEIAARCTDANPD 571 (603)
Q Consensus 508 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~------~~~~~~~~l~~li~~cl~~~P~ 571 (603)
|++|+.||....... .+.... ........... .-+.... .+...+.++.+|+.+||..||+
T Consensus 235 ll~g~~pf~~~~~~~--~~~~i~-~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 235 LILGKPLFSGETSID--QLVRII-QIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHSSCSSCCSSHHH--HHHHHH-HHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHhCCCCCCCCChHH--HHHHHH-HHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 999999997542110 000000 00000000000 0000000 1223456799999999999999
Q ss_pred CCCCHHHHHH
Q 007455 572 DRPSMNQVLQ 581 (603)
Q Consensus 572 ~RPs~~evl~ 581 (603)
+|||+.|+++
T Consensus 312 ~R~t~~e~l~ 321 (383)
T 3eb0_A 312 LRINPYEAMA 321 (383)
T ss_dssp GSCCHHHHHT
T ss_pred hCCCHHHHhc
Confidence 9999999984
No 219
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.1e-38 Score=335.19 Aligned_cols=261 Identities=21% Similarity=0.253 Sum_probs=199.5
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCCCCChHHHHHHHHHHHhhCC--------CCeeeecceeee----
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRSREGSDQVFERELEILGSIK--------HINLVNLRGYCR---- 377 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~---- 377 (603)
++|++.+.||+|+||.||+|.+..+ ..||||++... ....+.+.+|+++++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 6789999999999999999998754 46999998643 233456889999999985 788999999987
Q ss_pred cCCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC------
Q 007455 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL------ 451 (603)
Q Consensus 378 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~------ 451 (603)
.....++||||+. ++|.+++..... ..+++..++.++.|++.||+|||+++ +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 116 NGTHICMVFEVLG-HHLLKWIIKSNY--QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TEEEEEEEECCCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCceEEEEEeccC-ccHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhh
Confidence 5567899999994 566666654321 33899999999999999999999964 799999999999999775
Q ss_pred -------------------------------------------CeEEeecccccccCCCCcceeecccccccccCccccc
Q 007455 452 -------------------------------------------EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488 (603)
Q Consensus 452 -------------------------------------------~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 488 (603)
.+||+|||+++..... .....||+.|+|||++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhc
Confidence 7999999999876432 23356899999999999
Q ss_pred cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhh---h--------Ccch-hhhc------------
Q 007455 489 SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLK---E--------NRLE-DVID------------ 544 (603)
Q Consensus 489 ~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~--------~~~~-~~~~------------ 544 (603)
+..++.++|||||||++|||++|+.||.................... . .... ..+.
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 88999999999999999999999999976432221111111111100 0 0000 0000
Q ss_pred --------ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 545 --------KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 545 --------~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
......+...+..+.+|+.+||+.||++|||++|+++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0011234567788999999999999999999999986
No 220
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.5e-39 Score=338.91 Aligned_cols=252 Identities=12% Similarity=0.075 Sum_probs=180.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC---hHHHHHHHHHHHhhC--CCCeeeecc-------eeee
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG---SDQVFERELEILGSI--KHINLVNLR-------GYCR 377 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l--~h~niv~l~-------~~~~ 377 (603)
.+|...+.||+|+||.||+|.+. ++..||||++...... ..+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888899999999999999987 4556999999765432 234577885544444 699988754 4443
Q ss_pred cC-----------------CccEEEEEecCCCCccccccccCCCCccCCHHHH------HHHHHHHHHHHHHHHhCCCCC
Q 007455 378 LP-----------------ATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSAR------LKIALGSARGLAYLHHDCCPK 434 (603)
Q Consensus 378 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~~~ 434 (603)
.+ ...++||||++ |+|.+++..... .+++..+ ..++.|+++||+|||++ +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 32 23799999999 799999986422 2444555 78889999999999999 8
Q ss_pred eEEecCCCCCeEECCCCCeEEeecccccccCCCCcceeecccccccccCcccccc--CCCCcccchHhHHHHHHHHHhCC
Q 007455 435 IIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQS--GRATEKSDVYSFGVLLLELVTGK 512 (603)
Q Consensus 435 ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~ 512 (603)
|+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999865422 224557799999999987 67899999999999999999999
Q ss_pred CCCCcccccCCccHhHHHHHHhhhCcchhhhcccC-CCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 513 RPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRC-ADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 513 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.||.......... | ............. .......+..+.+++.+||+.||++|||++|+++
T Consensus 291 ~Pf~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 291 LPFGLVTPGIKGS---W-----KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CSTTBCCTTCTTC---C-----CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCcCcccccc---h-----hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9997653211000 0 0000000000000 0111234568999999999999999999999974
No 221
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.2e-39 Score=342.13 Aligned_cols=258 Identities=24% Similarity=0.325 Sum_probs=193.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCc------cEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPAT------KLL 384 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------~~l 384 (603)
.+|++.+.||+|+||.||+|.+..++.+|+|++...... ..+|+++++.++||||+++++++..... .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 468889999999999999999988888999988654322 2469999999999999999999855433 789
Q ss_pred EEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEEC-CCCCeEEeecccccc
Q 007455 385 IYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD-ENLEPHVSDFGLAKL 463 (603)
Q Consensus 385 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfG~~~~ 463 (603)
||||++++. .+.+.........+++..+..++.|+++||+|||++ +|+||||||+|||++ .++.+||+|||+++.
T Consensus 116 v~e~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 116 VLEYVPETV-YRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEECCSEEH-HHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EeeccCccH-HHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999998844 333332212233489999999999999999999999 899999999999999 789999999999987
Q ss_pred cCCCCcceeecccccccccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcch--
Q 007455 464 LVDEEAHVTTVVAGTFGYLAPEYLQSG-RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLE-- 540 (603)
Q Consensus 464 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 540 (603)
...... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .+..... ........
T Consensus 192 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~l~~i~~-~~g~p~~~~~ 266 (394)
T 4e7w_A 192 LIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID--QLVEIIK-VLGTPSREQI 266 (394)
T ss_dssp CCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH-HHCCCCHHHH
T ss_pred ccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHH-HhCCCCHHHH
Confidence 644332 2345689999999998654 58999999999999999999999997542110 0111110 00000000
Q ss_pred -----hhhcccCC---C------cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 541 -----DVIDKRCA---D------ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 541 -----~~~~~~~~---~------~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.......+ . .+...+.++.+|+.+||+.||++|||+.|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 00000000 0 11124568999999999999999999999986
No 222
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=328.09 Aligned_cols=264 Identities=22% Similarity=0.294 Sum_probs=194.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeee------------
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR------------ 377 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~------------ 377 (603)
++|.+.+.||+|+||.||+|.+.. ++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 568888999999999999999986 5579999987665555677899999999999999999998873
Q ss_pred --cCCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEEC-CCCCeE
Q 007455 378 --LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD-ENLEPH 454 (603)
Q Consensus 378 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~k 454 (603)
.....++||||++ |+|.+++... .+++..++.++.|++.||+|||++ +|+||||||+||+++ +++.+|
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQG-----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEE
T ss_pred ccccCceeEEeeccC-CCHHHHhhcC-----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEE
Confidence 3467799999998 5999988642 288999999999999999999999 899999999999997 567999
Q ss_pred EeecccccccCCCCc--ceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHH
Q 007455 455 VSDFGLAKLLVDEEA--HVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMN 531 (603)
Q Consensus 455 l~DfG~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 531 (603)
|+|||+++....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ....
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~ 235 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL------EQMQ 235 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHH
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH------HHHH
Confidence 999999987643221 12234557899999998865 67899999999999999999999999754211 1111
Q ss_pred HHhhhCc-------------chhhhcccC--CC-----cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcccC
Q 007455 532 TLLKENR-------------LEDVIDKRC--AD-----ADMETVEAILEIAARCTDANPDDRPSMNQVLQ--LLEQEVMS 589 (603)
Q Consensus 532 ~~~~~~~-------------~~~~~~~~~--~~-----~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~--~L~~~~~~ 589 (603)
....... ....+.... +. .....+.++.+++.+||+.||++|||++|+++ .+.....+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p 315 (320)
T 2i6l_A 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFP 315 (320)
T ss_dssp HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC-
T ss_pred HHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCc
Confidence 1111000 000000000 00 11234567999999999999999999999986 56554433
No 223
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.5e-39 Score=335.67 Aligned_cols=269 Identities=19% Similarity=0.226 Sum_probs=190.4
Q ss_pred HHHHHHhhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecCCc-
Q 007455 304 CEIIEKLEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPAT- 381 (603)
Q Consensus 304 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 381 (603)
.......++|++.+.||+|+||.||+|.+. ++..||||++...... .....+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 355677899999999999999999999986 4567999988554322 2346778888999999999999999865443
Q ss_pred ------cEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHH--hCCCCCeEEecCCCCCeEECC-CCC
Q 007455 382 ------KLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH--HDCCPKIIHRDIKSSNILLDE-NLE 452 (603)
Q Consensus 382 ------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~Dlkp~NIll~~-~~~ 452 (603)
.++||||+++ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 7899999987 555444432223344889999999999999999999 77 8999999999999997 899
Q ss_pred eEEeecccccccCCCCcceeecccccccccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHH
Q 007455 453 PHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSG-RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMN 531 (603)
Q Consensus 453 ~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 531 (603)
+||+|||+++....... .....||+.|+|||++.+. .++.++||||||+++|||++|+.||....... .......
T Consensus 171 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~~~~~~ 246 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG--QLHEIVR 246 (360)
T ss_dssp EEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH
T ss_pred EEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH--HHHHHHH
Confidence 99999999987654332 2345689999999998654 48999999999999999999999997542110 0001110
Q ss_pred -----------HHhhhCcchhhh-------cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 532 -----------TLLKENRLEDVI-------DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 532 -----------~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
............ ...........+.++.+|+.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 247 VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000000 00011112235678999999999999999999999996
No 224
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=341.19 Aligned_cols=264 Identities=22% Similarity=0.330 Sum_probs=180.9
Q ss_pred CCCC-CCeeeecCCeEEEEEEEC---CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeee--cCCccEEE
Q 007455 312 ALDE-EDVVGSGGFGTVYRMVMN---DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCR--LPATKLLI 385 (603)
Q Consensus 312 ~~~~-~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~lv 385 (603)
.|++ +++||+|+||.||+|.+. .+..||||++.... ....+.+|+.++++++||||+++++++. .....++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3444 568999999999999976 34569999986543 2346889999999999999999999995 46778999
Q ss_pred EEecCCCCccccccccC-----CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE----CCCCCeEEe
Q 007455 386 YDYLSMGSLDDFLHEHG-----EGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL----DENLEPHVS 456 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~ 456 (603)
|||+.+ +|.+++.... .....+++..++.++.|++.||+|||++ +|+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 999986 8887775322 1122489999999999999999999999 89999999999999 677899999
Q ss_pred ecccccccCCCCc--ceeecccccccccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCcccccC---CccHhHHH
Q 007455 457 DFGLAKLLVDEEA--HVTTVVAGTFGYLAPEYLQSG-RATEKSDVYSFGVLLLELVTGKRPTDPTFVKR---GLNVVGWM 530 (603)
Q Consensus 457 DfG~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~---~~~~~~~~ 530 (603)
|||+++....... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ........
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l 254 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence 9999987654321 223446789999999998764 58999999999999999999999997543210 00000011
Q ss_pred HHHhh---h---Ccchhh------------h-cccCCCc---------CHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 531 NTLLK---E---NRLEDV------------I-DKRCADA---------DMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 531 ~~~~~---~---~~~~~~------------~-~~~~~~~---------~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..+.. . ..+... + ....... ....+..+.+|+.+||+.||++|||++|+++
T Consensus 255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11100 0 000000 0 0000000 0011356889999999999999999999997
No 225
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.9e-39 Score=326.83 Aligned_cols=252 Identities=24% Similarity=0.352 Sum_probs=194.7
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhC-CCCeeeecceeeec------CC
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSI-KHINLVNLRGYCRL------PA 380 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~------~~ 380 (603)
..++|++.+.||+|+||.||+|.+. ++..||+|++.... .....+.+|+.+++++ +||||+++++++.. ..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 3567889999999999999999986 55679999986543 3346789999999999 79999999999976 46
Q ss_pred ccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccc
Q 007455 381 TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGL 460 (603)
Q Consensus 381 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 460 (603)
..++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 175 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 175 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcC
Confidence 7899999999999999998643 23488999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCcceeecccccccccCccccc-----cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhh
Q 007455 461 AKLLVDEEAHVTTVVAGTFGYLAPEYLQ-----SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLK 535 (603)
Q Consensus 461 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 535 (603)
+........ ......|++.|+|||++. +..++.++||||||+++|||++|+.||...... ...... .
T Consensus 176 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~-~ 247 (326)
T 2x7f_A 176 SAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------RALFLI-P 247 (326)
T ss_dssp TC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHH-H
T ss_pred ceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------HHHHHh-h
Confidence 986543221 223456899999999986 567889999999999999999999998643211 000111 1
Q ss_pred hCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 536 ENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..... .......+..+.+++.+||..||++|||++|+++
T Consensus 248 ~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 248 RNPAP-------RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HSCCC-------CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCccc-------cCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11000 0011233467999999999999999999999986
No 226
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=9.7e-39 Score=327.96 Aligned_cols=257 Identities=22% Similarity=0.325 Sum_probs=200.5
Q ss_pred hCCCCCCeeeecCCeEEEEEEE-C-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCe------eeecceeeecCCcc
Q 007455 311 EALDEEDVVGSGGFGTVYRMVM-N-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHIN------LVNLRGYCRLPATK 382 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~~ 382 (603)
++|++.+.||+|+||.||+|.+ . ++..||||++.... ...+.+.+|+++++.++|++ ++++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 5788899999999999999997 3 45679999986432 33456889999999997765 99999999999999
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC-------------
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE------------- 449 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~------------- 449 (603)
++||||+ +++|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred EEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccc
Confidence 9999999 7899999976532 3488999999999999999999999 8999999999999987
Q ss_pred ------CCCeEEeecccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCC
Q 007455 450 ------NLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRG 523 (603)
Q Consensus 450 ------~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~ 523 (603)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 241 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE- 241 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-
T ss_pred ccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-
Confidence 678999999999865432 234568999999999998899999999999999999999999997532111
Q ss_pred ccHhHHHHHHhhh--------Ccchhh-----------------hc------ccCCCcCHHHHHHHHHHHHHcccCCCCC
Q 007455 524 LNVVGWMNTLLKE--------NRLEDV-----------------ID------KRCADADMETVEAILEIAARCTDANPDD 572 (603)
Q Consensus 524 ~~~~~~~~~~~~~--------~~~~~~-----------------~~------~~~~~~~~~~~~~l~~li~~cl~~~P~~ 572 (603)
........... ...... +. ..........+.++.+++.+||+.||++
T Consensus 242 --~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 242 --HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp --HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred --HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 11111111000 000000 00 0001123355678999999999999999
Q ss_pred CCCHHHHHH
Q 007455 573 RPSMNQVLQ 581 (603)
Q Consensus 573 RPs~~evl~ 581 (603)
|||++|+++
T Consensus 320 Rpt~~ell~ 328 (339)
T 1z57_A 320 RITLREALK 328 (339)
T ss_dssp SCCHHHHTT
T ss_pred ccCHHHHhc
Confidence 999999985
No 227
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.9e-39 Score=343.37 Aligned_cols=258 Identities=26% Similarity=0.314 Sum_probs=192.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeecC----C--ccE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLP----A--TKL 383 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----~--~~~ 383 (603)
.+|+..+.||+|+||.||+|.+.. +..||||++...... ..+|+++++.++||||+++++++... + ..+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchh----HHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 367888999999999999999974 667999998654322 34799999999999999999988532 1 256
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCC-CCeEEeeccccc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDEN-LEPHVSDFGLAK 462 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG~~~ 462 (603)
+||||+++ ++.+.+.........+++..+..++.|+++||+|||++ +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999987 66666654322334589999999999999999999998 89999999999999965 568999999998
Q ss_pred ccCCCCcceeecccccccccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCc---
Q 007455 463 LLVDEEAHVTTVVAGTFGYLAPEYLQSG-RATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR--- 538 (603)
Q Consensus 463 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 538 (603)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .+...... .....
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~-lg~p~~~~ 280 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKV-LGTPTREQ 280 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHH-HCSCCHHH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHH-hCCCCHHH
Confidence 7644332 2345689999999998664 78999999999999999999999997542110 11111110 00000
Q ss_pred -------chhhhcccCCC------cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 539 -------LEDVIDKRCAD------ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 539 -------~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..+...+.... .+...+.++.+|+.+||..||++|||+.|+++
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 00000000000 11223567999999999999999999999985
No 228
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.7e-38 Score=329.27 Aligned_cols=254 Identities=21% Similarity=0.297 Sum_probs=193.1
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCCh--HHHHHHHHHHHhhCCCCeeeecceeeecCCcc-----
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGS--DQVFERELEILGSIKHINLVNLRGYCRLPATK----- 382 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 382 (603)
++|...+.||+|+||.||+|.+.. +..||||++....... .+.+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 578888999999999999999875 4569999997643332 45688999999999999999999999877655
Q ss_pred -EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccc
Q 007455 383 -LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461 (603)
Q Consensus 383 -~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~ 461 (603)
++||||+.+ +|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 122 ~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a 191 (371)
T 4exu_A 122 FYLVMPFMQT-DLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 191 (371)
T ss_dssp CEEEEECCCE-EHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred EEEEEccccc-cHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence 999999984 88877743 289999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCcceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCc--
Q 007455 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENR-- 538 (603)
Q Consensus 462 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 538 (603)
+..... .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... ..............
T Consensus 192 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~ 264 (371)
T 4exu_A 192 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL---DQLTQILKVTGVPGTE 264 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCHH
T ss_pred cccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCcHH
Confidence 865432 234568999999999876 67899999999999999999999999753211 00000000000000
Q ss_pred ---------chhhhc---ccCC----CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 539 ---------LEDVID---KRCA----DADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 539 ---------~~~~~~---~~~~----~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
....+. .... ......+..+.+|+.+||+.||++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 000000 0000 011123567999999999999999999999986
No 229
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.1e-38 Score=322.06 Aligned_cols=251 Identities=27% Similarity=0.399 Sum_probs=190.9
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeec----------
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRL---------- 378 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 378 (603)
.++|++.+.||+|+||.||+|.+. ++..||||.+... ....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 457888999999999999999986 5667999998542 2234568899999999999999999998754
Q ss_pred ---CCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEE
Q 007455 379 ---PATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHV 455 (603)
Q Consensus 379 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 455 (603)
....++||||+++|+|.+++.... ..+++..++.++.|+++||+|||++ +++||||||+||+++.++.+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEE
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEE
Confidence 346789999999999999998643 2378889999999999999999999 8999999999999999999999
Q ss_pred eecccccccCCCC-------------cceeecccccccccCccccccC-CCCcccchHhHHHHHHHHHhCCCCCCccccc
Q 007455 456 SDFGLAKLLVDEE-------------AHVTTVVAGTFGYLAPEYLQSG-RATEKSDVYSFGVLLLELVTGKRPTDPTFVK 521 (603)
Q Consensus 456 ~DfG~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~p~~~~~~~ 521 (603)
+|||++....... ........|++.|+|||++.+. .++.++||||+|+++|||++ ||....
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-- 232 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-- 232 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--
Confidence 9999998664321 1122345689999999998754 68999999999999999998 543211
Q ss_pred CCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 522 RGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
........... .. .......+...+..+.+++.+||+.||.+|||++|+++
T Consensus 233 ---~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 ---ERVNILKKLRS-VS-----IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp ---HHHHHHHHHHS-TT-----CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---hHHHHHHhccc-cc-----cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 11111111111 00 00011223344567899999999999999999999987
No 230
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.5e-38 Score=319.08 Aligned_cols=251 Identities=24% Similarity=0.334 Sum_probs=201.9
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCC--CChHHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSR--EGSDQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
..++|++.+.||+|+||.||+|.+. ++..||+|++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4578999999999999999999987 56679999985432 33456789999999999999999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCC---CCeEEeeccccc
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDEN---LEPHVSDFGLAK 462 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfG~~~ 462 (603)
+||+++++|.+++..... +++..++.++.|++.||.|||+. +++||||||+||+++.+ +.+||+|||++.
T Consensus 100 ~e~~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 100 GELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp ECCCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEccCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 999999999998876543 89999999999999999999999 89999999999999764 469999999998
Q ss_pred ccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 463 LLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 463 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
....... .....|++.|+|||.+.+ .++.++||||+|+++|+|++|+.||..... ......... .....
T Consensus 173 ~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~-~~~~~- 241 (287)
T 2wei_A 173 CFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRVET-GKYAF- 241 (287)
T ss_dssp TBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH-CCCCC-
T ss_pred eecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHc-CCCCC-
Confidence 7644322 233458899999999875 488999999999999999999999865321 111111111 11000
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.. ......+.++.+++.+||+.+|++|||++|+++
T Consensus 242 ---~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 ---DL-PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp ---CS-GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---Cc-hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 001233567999999999999999999999997
No 231
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=6.5e-38 Score=324.24 Aligned_cols=251 Identities=23% Similarity=0.321 Sum_probs=193.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCCh--HHHHHHHHHHHhhCCCCeeeecceeeecCCc------
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGS--DQVFERELEILGSIKHINLVNLRGYCRLPAT------ 381 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 381 (603)
++|...+.||+|+||.||+|.+.. +..||||++....... .+.+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 567888999999999999999875 5569999997643332 3568899999999999999999999987654
Q ss_pred cEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccc
Q 007455 382 KLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLA 461 (603)
Q Consensus 382 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~ 461 (603)
.++||||+.+ +|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 104 FYLVMPFMQT-DLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CEEEEECCSE-EGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred EEEEeccccC-CHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 4999999984 88887753 288999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCcceeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhh---C
Q 007455 462 KLLVDEEAHVTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKE---N 537 (603)
Q Consensus 462 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~ 537 (603)
+..... .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... ......... .
T Consensus 174 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~i~~~~~~~ 243 (353)
T 3coi_A 174 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL------DQLTQILKVTGVP 243 (353)
T ss_dssp TC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH------HHHHHHHHHHCBC
T ss_pred cCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCC
Confidence 865332 234568999999999876 67899999999999999999999999753211 111111100 0
Q ss_pred c-----------chhhh-------cccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 538 R-----------LEDVI-------DKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 538 ~-----------~~~~~-------~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. ....+ ...........+.++.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 244 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 00000 00111112244678999999999999999999999986
No 232
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.1e-38 Score=323.95 Aligned_cols=261 Identities=23% Similarity=0.323 Sum_probs=198.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC--CCCEEEEEEeCCCC--CChHHHHHHHHHHHhhC---CCCeeeecceeee-----
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN--DCGTFAVKRIDRSR--EGSDQVFERELEILGSI---KHINLVNLRGYCR----- 377 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~----- 377 (603)
.++|++.+.||+|+||.||+|.+. ++..||+|++.... ......+.+|+.+++.+ +||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 468899999999999999999984 45679999885432 12223466788777766 8999999999987
Q ss_pred cCCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEee
Q 007455 378 LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSD 457 (603)
Q Consensus 378 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 457 (603)
.....++||||++ |+|.+++..... ..+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECS
T ss_pred CCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEec
Confidence 5567899999998 599999876533 2388999999999999999999999 899999999999999999999999
Q ss_pred cccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhC
Q 007455 458 FGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537 (603)
Q Consensus 458 fG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 537 (603)
||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .............
T Consensus 164 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~~ 238 (326)
T 1blx_A 164 FGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV---DQLGKILDVIGLP 238 (326)
T ss_dssp CCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCC
T ss_pred CcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHHHcCCC
Confidence 99998664322 223456899999999999889999999999999999999999999753211 1111111110000
Q ss_pred ---cch-------hhhc----ccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 538 ---RLE-------DVID----KRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 538 ---~~~-------~~~~----~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.+. ..+. ..........+..+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 0000 0000112234567899999999999999999999995
No 233
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.4e-38 Score=323.55 Aligned_cols=250 Identities=19% Similarity=0.339 Sum_probs=194.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCC--hHHHHHHHHHHHhhCC--CCeeeecceeeecCCccEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREG--SDQVFERELEILGSIK--HINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv 385 (603)
.++|++.+.||+|+||.||+|.+.++..||||++...... ....+.+|++++.+++ |+||+++++++......++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 4578889999999999999999988889999998654332 3456889999999997 59999999999999999999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|| +.+++|.+++..... +++..+..++.|+++||.|||++ +++||||||+||++++ +.+||+|||+++...
T Consensus 107 ~e-~~~~~L~~~l~~~~~----~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EC-CCSEEHHHHHHHCSS----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred Ee-cCCCcHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 99 567799999986543 88999999999999999999999 8999999999999965 899999999998765
Q ss_pred CCCcc-eeecccccccccCcccccc-----------CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHH
Q 007455 466 DEEAH-VTTVVAGTFGYLAPEYLQS-----------GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTL 533 (603)
Q Consensus 466 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 533 (603)
..... ......|++.|+|||++.+ ..++.++||||||+++|||++|+.||..... ........
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~ 252 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAI 252 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHH
Confidence 43221 2234568999999999865 4678899999999999999999999864311 11111111
Q ss_pred hhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 534 LKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..... ....+...+.++.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 253 IDPNH--------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HCTTS--------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Hhccc--------ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11110 01112223467999999999999999999999996
No 234
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=9.7e-39 Score=330.33 Aligned_cols=259 Identities=21% Similarity=0.297 Sum_probs=195.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC-hHHHHHHHHHHHhhCCCCeeeecceeeecC-----CccE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG-SDQVFERELEILGSIKHINLVNLRGYCRLP-----ATKL 383 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~ 383 (603)
++|++.+.||+|+||.||+|.+.. +..||||++...... ....+.+|++++++++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 578889999999999999999874 456999999654322 345678999999999999999999987654 6789
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
+||||+.+ +|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 91 lv~e~~~~-~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 91 IIQELMQT-DLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp EEECCCSE-EHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEeccCc-cHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 99999984 899888753 289999999999999999999999 899999999999999999999999999987
Q ss_pred cCCCCcc---------eeecccccccccCcccccc-CCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHH
Q 007455 464 LVDEEAH---------VTTVVAGTFGYLAPEYLQS-GRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTL 533 (603)
Q Consensus 464 ~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 533 (603)
....... ......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||....... ........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~ 238 (353)
T 2b9h_A 162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH---QLLLIFGI 238 (353)
T ss_dssp CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHH
T ss_pred cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHH
Confidence 6532211 1123468999999998754 678999999999999999999999997542110 00000000
Q ss_pred hhhCc------------chhhhcc--cCCC-----cCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 534 LKENR------------LEDVIDK--RCAD-----ADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 534 ~~~~~------------~~~~~~~--~~~~-----~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
..... ..+.+.. ..+. .....+.++.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 0000000 0000 01134567899999999999999999999997
No 235
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.9e-38 Score=328.31 Aligned_cols=260 Identities=19% Similarity=0.266 Sum_probs=197.6
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCC-----------CCeeeecceeeec
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIK-----------HINLVNLRGYCRL 378 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~ 378 (603)
.+|.+.+.||+|+||.||+|.+. ++..||||++.... .....+.+|+.+++++. ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 57889999999999999999986 45569999986432 23456889999999886 8999999999876
Q ss_pred CC----ccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEEC------
Q 007455 379 PA----TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD------ 448 (603)
Q Consensus 379 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~------ 448 (603)
.+ ..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||++. +|+||||||+|||++
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCc
Confidence 54 678999999 8899999986433 23889999999999999999999963 799999999999994
Q ss_pred CCCCeEEeecccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhH
Q 007455 449 ENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVG 528 (603)
Q Consensus 449 ~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~ 528 (603)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.............
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp TEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred CcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 4457999999999876432 233468999999999998899999999999999999999999997543211111111
Q ss_pred HHHHHhh-----------hCcc----------------------hhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCC
Q 007455 529 WMNTLLK-----------ENRL----------------------EDVIDKRCADADMETVEAILEIAARCTDANPDDRPS 575 (603)
Q Consensus 529 ~~~~~~~-----------~~~~----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs 575 (603)
....... .... .... ......+...+.++.+|+.+||+.||++|||
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVL-TEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHH-HHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhh-hhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 1111100 0000 0000 0111234567788999999999999999999
Q ss_pred HHHHHH
Q 007455 576 MNQVLQ 581 (603)
Q Consensus 576 ~~evl~ 581 (603)
++|+++
T Consensus 328 ~~ell~ 333 (373)
T 1q8y_A 328 AGGLVN 333 (373)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999997
No 236
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=323.63 Aligned_cols=240 Identities=26% Similarity=0.376 Sum_probs=191.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC------hHHHHHHHHHHHhhC----CCCeeeecceeeec
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG------SDQVFERELEILGSI----KHINLVNLRGYCRL 378 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~~~~~~ 378 (603)
.++|++.+.||+|+||.||+|.+. ++..||||.+...... ....+.+|+.++.++ +||||+++++++..
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~ 109 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET 109 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence 467999999999999999999976 4567999998654322 122356799999988 89999999999999
Q ss_pred CCccEEEEEe-cCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEEC-CCCCeEEe
Q 007455 379 PATKLLIYDY-LSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD-ENLEPHVS 456 (603)
Q Consensus 379 ~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~ 456 (603)
.+..++|+|| +.+++|.+++..... +++..++.++.|+++||+|||++ +++||||||+||+++ .++.+||+
T Consensus 110 ~~~~~~v~e~~~~~~~L~~~l~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 110 QEGFMLVLERPLPAQDLFDYITEKGP----LGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp ---CEEEEECCSSEEEHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred CCeEEEEEEecCCCCCHHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEE
Confidence 9999999999 789999999987543 89999999999999999999999 899999999999999 88999999
Q ss_pred ecccccccCCCCcceeecccccccccCccccccCCCC-cccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhh
Q 007455 457 DFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRAT-EKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLK 535 (603)
Q Consensus 457 DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 535 (603)
|||+++...... .....|+..|+|||++.+..+. .++||||+|+++|||++|+.||..... ...
T Consensus 183 dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------------~~~ 247 (312)
T 2iwi_A 183 DFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------------ILE 247 (312)
T ss_dssp CCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------------HHH
T ss_pred EcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------------Hhh
Confidence 999998765432 2345689999999998776664 589999999999999999999864210 000
Q ss_pred hCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 536 ENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
. ....+...+.++.+++.+||+.+|++|||++|+++
T Consensus 248 -~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 248 -A---------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -T---------CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -h---------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 01122234567899999999999999999999997
No 237
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=7.6e-38 Score=327.20 Aligned_cols=200 Identities=24% Similarity=0.289 Sum_probs=168.8
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCC-CEEEEEEeCCCCCChHHHHHHHHHHHhhCC-CC-----eeeecceeeecCCcc
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDC-GTFAVKRIDRSREGSDQVFERELEILGSIK-HI-----NLVNLRGYCRLPATK 382 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~~ 382 (603)
.++|++.+.||+|+||.||+|.+..+ ..||||++.... .....+.+|+.+++.++ |+ +|+++++++...+..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 46889999999999999999998754 469999986432 23456778999988885 44 499999999999999
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEEC--CCCCeEEeeccc
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD--ENLEPHVSDFGL 460 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~DfG~ 460 (603)
++||||+++ +|.+++..... ..+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|||+
T Consensus 132 ~lv~e~~~~-~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 132 CLVFEMLSY-NLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEECCCC-BHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEecCCC-CHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 999999975 99999986532 2389999999999999999999952 12899999999999995 477899999999
Q ss_pred ccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcc
Q 007455 461 AKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPT 518 (603)
Q Consensus 461 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~ 518 (603)
++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 208 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 208 SCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9876432 23456899999999999989999999999999999999999999754
No 238
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=8.8e-39 Score=326.06 Aligned_cols=240 Identities=25% Similarity=0.394 Sum_probs=197.2
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCC------hHHHHHHHHHHHhhCC--CCeeeecceeeecCC
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREG------SDQVFERELEILGSIK--HINLVNLRGYCRLPA 380 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~ 380 (603)
.++|++.+.||+|+||.||+|.+.. +..||||.+...... ....+.+|+.++++++ |+||+++++++..++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 4678899999999999999999864 456999998654221 1234678999999996 599999999999999
Q ss_pred ccEEEEEecCC-CCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEEC-CCCCeEEeec
Q 007455 381 TKLLIYDYLSM-GSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLD-ENLEPHVSDF 458 (603)
Q Consensus 381 ~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Df 458 (603)
..++|+|++.+ ++|.+++..... +++..++.++.|+++||+|||+. +|+||||||+||+++ +++.+||+||
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~~~----l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITERGA----LQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHCS----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cEEEEEEcCCCCccHHHHHhccCC----CCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99999999986 899999886543 89999999999999999999998 899999999999999 7889999999
Q ss_pred ccccccCCCCcceeecccccccccCccccccCCC-CcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhC
Q 007455 459 GLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRA-TEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKEN 537 (603)
Q Consensus 459 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 537 (603)
|+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||..... .....
T Consensus 195 g~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------------~~~~~ 259 (320)
T 3a99_A 195 GSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQ 259 (320)
T ss_dssp TTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------------HHHCC
T ss_pred cccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------------hhccc
Confidence 9998765432 234568999999999877665 6789999999999999999999864310 00000
Q ss_pred cchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 538 RLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
...+...+.++.+++.+||+.||++|||++|+++
T Consensus 260 ----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 ----------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ----------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111233467999999999999999999999987
No 239
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=9.6e-38 Score=322.81 Aligned_cols=257 Identities=21% Similarity=0.295 Sum_probs=198.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCC--CEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCe------eeecceeeecCCcc
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDC--GTFAVKRIDRSREGSDQVFERELEILGSIKHIN------LVNLRGYCRLPATK 382 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~~ 382 (603)
++|++.+.||+|+||.||+|.+... ..||+|++.... ...+.+.+|+.+++.++|++ ++++++++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 5788999999999999999998643 469999986432 33456889999999998776 89999999999999
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEE---------------
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILL--------------- 447 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll--------------- 447 (603)
++||||+ ++++.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred EEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccc
Confidence 9999999 5577777765432 3489999999999999999999998 89999999999999
Q ss_pred ----CCCCCeEEeecccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCC
Q 007455 448 ----DENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRG 523 (603)
Q Consensus 448 ----~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~ 523 (603)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||......
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-- 245 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR-- 245 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--
T ss_pred cccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--
Confidence 56789999999999865432 23456899999999999889999999999999999999999999753211
Q ss_pred ccHhHHHHHHhhhC--------cchhh-----------------hcc------cCCCcCHHHHHHHHHHHHHcccCCCCC
Q 007455 524 LNVVGWMNTLLKEN--------RLEDV-----------------IDK------RCADADMETVEAILEIAARCTDANPDD 572 (603)
Q Consensus 524 ~~~~~~~~~~~~~~--------~~~~~-----------------~~~------~~~~~~~~~~~~l~~li~~cl~~~P~~ 572 (603)
.....+....... ..... ... .........+.++.+|+.+||+.||++
T Consensus 246 -~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 246 -EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp -HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred -HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 1111111111000 00000 000 000122344668999999999999999
Q ss_pred CCCHHHHHH
Q 007455 573 RPSMNQVLQ 581 (603)
Q Consensus 573 RPs~~evl~ 581 (603)
|||++|+++
T Consensus 325 Rpt~~e~l~ 333 (355)
T 2eu9_A 325 RITLAEALL 333 (355)
T ss_dssp SCCHHHHTT
T ss_pred CcCHHHHhc
Confidence 999999985
No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.1e-38 Score=322.60 Aligned_cols=258 Identities=20% Similarity=0.238 Sum_probs=175.6
Q ss_pred hhCCCCC-CeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCeeeecceeeec----CCccE
Q 007455 310 LEALDEE-DVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRL----PATKL 383 (603)
Q Consensus 310 ~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 383 (603)
.++|.+. ++||+|+||.||+|.+. ++..||||++... .....+....++.+.||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 4677774 46999999999999988 4567999998542 2222333344667799999999999875 44579
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC---CCCeEEeeccc
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE---NLEPHVSDFGL 460 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG~ 460 (603)
+||||+++|+|.+++..... ..+++..++.++.|++.||.|||++ +|+||||||+||+++. ++.+||+|||+
T Consensus 103 lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 99999999999999986532 3489999999999999999999999 8999999999999986 44599999999
Q ss_pred ccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcch
Q 007455 461 AKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLE 540 (603)
Q Consensus 461 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (603)
++...... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||.......... ...........
T Consensus 178 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~- 250 (336)
T 3fhr_A 178 AKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP---GMKRRIRLGQY- 250 (336)
T ss_dssp CEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred ceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh---hHHHhhhcccc-
Confidence 98654322 234568999999999988889999999999999999999999996543211000 00000000000
Q ss_pred hhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcc
Q 007455 541 DVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ--LLEQEV 587 (603)
Q Consensus 541 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~--~L~~~~ 587 (603)
. .........+.++.+++.+||+.||++|||++|+++ .+.+..
T Consensus 251 ---~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 295 (336)
T 3fhr_A 251 ---G-FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM 295 (336)
T ss_dssp ---C-CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred ---c-cCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence 0 000111234567999999999999999999999997 555543
No 241
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.9e-38 Score=334.65 Aligned_cols=250 Identities=25% Similarity=0.341 Sum_probs=185.7
Q ss_pred CCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccEEEEEecCCC
Q 007455 314 DEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLLIYDYLSMG 392 (603)
Q Consensus 314 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 392 (603)
...++||+|+||+||.+...+++.||||++... ..+.+.+|+++++++ +||||+++++++...+..++||||+. |
T Consensus 18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 345789999999998777777889999998543 235578999999876 89999999999999999999999996 5
Q ss_pred CccccccccCCCCcc---CCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCC-------------CCeEEe
Q 007455 393 SLDDFLHEHGEGQQL---LNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDEN-------------LEPHVS 456 (603)
Q Consensus 393 sL~~~l~~~~~~~~~---l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-------------~~~kl~ 456 (603)
+|.+++......... .++..++.++.|++.||+|||++ +|+||||||+|||++.+ +.+||+
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 999999865432211 13334678999999999999999 89999999999999754 479999
Q ss_pred ecccccccCCCCcc---eeecccccccccCcccccc-------CCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCcc
Q 007455 457 DFGLAKLLVDEEAH---VTTVVAGTFGYLAPEYLQS-------GRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLN 525 (603)
Q Consensus 457 DfG~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~ 525 (603)
|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||......
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---- 246 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR---- 246 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH----
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh----
Confidence 99999877543322 1234579999999999865 568899999999999999999 89998643211
Q ss_pred HhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 526 VVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.. ...... .. ............+.++.+++.+||+.||++|||+.|+++
T Consensus 247 ~~----~i~~~~-~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 ES----NIIRGI-FS--LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HH----HHHHTC-CC--CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH----HHhcCC-CC--cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 00 111100 00 000011123466788999999999999999999999985
No 242
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.4e-38 Score=321.25 Aligned_cols=252 Identities=29% Similarity=0.402 Sum_probs=176.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC-hHHHHHHHHH-HHhhCCCCeeeecceeeecCCccEEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG-SDQVFERELE-ILGSIKHINLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e 387 (603)
++|+..+.||+|+||.||+|.+. ++..||||++...... ....+.+|+. +++.++||||+++++++..++..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 67888999999999999999987 4556999999654322 2344556666 6777899999999999999999999999
Q ss_pred ecCCCCccccccccC-CCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 388 YLSMGSLDDFLHEHG-EGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
|+++ +|.+++.... .....+++..+..++.|++.||.|||+.. +++||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9986 8877776311 11234899999999999999999999962 699999999999999999999999999987644
Q ss_pred CCcceeecccccccccCcccc----ccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 467 EEAHVTTVVAGTFGYLAPEYL----QSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||....... ......
T Consensus 179 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------------~~~~~~ 242 (327)
T 3aln_A 179 SIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF--------------DQLTQV 242 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------------------CCC
T ss_pred ccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH--------------HHHHHH
Confidence 322 2334689999999998 45678899999999999999999999986532100 000111
Q ss_pred hcccCC----CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 543 IDKRCA----DADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 543 ~~~~~~----~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.....+ ......+..+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 243 VKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 111100 011234567999999999999999999999975
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.7e-38 Score=332.03 Aligned_cols=248 Identities=26% Similarity=0.375 Sum_probs=185.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccEEEEEec
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLLIYDYL 389 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 389 (603)
.+|+..++||+|+||+||.....+++.||||++...... .+.+|+++++.+ +||||+++++++.+....|+||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 357778899999999976655667789999999653322 257899999999 7999999999999999999999999
Q ss_pred CCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC-----CCCeEEeeccccccc
Q 007455 390 SMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE-----NLEPHVSDFGLAKLL 464 (603)
Q Consensus 390 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DfG~~~~~ 464 (603)
.+ +|.+++...... .....++.++.|+++||+|||++ +|+||||||+|||++. ...+||+|||+++..
T Consensus 101 ~g-~L~~~l~~~~~~---~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 101 AA-TLQEYVEQKDFA---HLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp SE-EHHHHHHSSSCC---CCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred CC-CHHHHHHhcCCC---ccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 75 999998765422 33445678999999999999999 8999999999999953 235889999999876
Q ss_pred CCCCc--ceeecccccccccCccccc---cCCCCcccchHhHHHHHHHHHh-CCCCCCcccccCCccHhHHHHHHhhhCc
Q 007455 465 VDEEA--HVTTVVAGTFGYLAPEYLQ---SGRATEKSDVYSFGVLLLELVT-GKRPTDPTFVKRGLNVVGWMNTLLKENR 538 (603)
Q Consensus 465 ~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 538 (603)
..... .......||+.|+|||++. ...++.++||||+||++|||++ |..||...... ..........
T Consensus 174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-------~~~~~~~~~~ 246 (432)
T 3p23_A 174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-------QANILLGACS 246 (432)
T ss_dssp ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-------HHHHHTTCCC
T ss_pred cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-------HHHHHhccCC
Confidence 54321 2234467999999999997 4567789999999999999999 88888542110 1111111110
Q ss_pred chhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 539 LEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
.............+.+++.+||+.||++|||++|+++
T Consensus 247 ------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 247 ------LDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ------CTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------ccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0111122345567889999999999999999999983
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6e-37 Score=311.97 Aligned_cols=252 Identities=25% Similarity=0.365 Sum_probs=178.4
Q ss_pred hhCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCCh--HHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGS--DQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
.++|+..+.||+|+||.||+|.+. ++..||||++....... .+.+.++..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888999999999999999987 56689999996543322 233445556788889999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||+ ++.+..+..... ..+++..+..++.|+++||.|||+.. +++||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ---GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp CCC-SEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecc-CCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 999 445554444321 23899999999999999999999831 799999999999999999999999999976644
Q ss_pred CCcceeecccccccccCccccc-----cCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchh
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQ-----SGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLED 541 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (603)
... .....|++.|+|||++. ...++.++||||||+++|||++|+.||..... .............
T Consensus 178 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~--- 247 (318)
T 2dyl_A 178 DKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVLTKVLQEEP--- 247 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHHSCC---
T ss_pred Ccc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-----cHHHHHHHhccCC---
Confidence 322 23456899999999984 45678899999999999999999999864211 1111111111110
Q ss_pred hhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 007455 542 VIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQ 581 (603)
Q Consensus 542 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 581 (603)
...+ .....+.++.+++.+||+.||.+|||++|+++
T Consensus 248 ---~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 ---PLLP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ---CCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---CCCC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0011 11124467999999999999999999999985
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.6e-37 Score=339.61 Aligned_cols=260 Identities=26% Similarity=0.358 Sum_probs=196.9
Q ss_pred HhhCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeec------CC
Q 007455 309 KLEALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRL------PA 380 (603)
Q Consensus 309 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 380 (603)
..++|++.+.||+|+||.||+|.+.. +..||||++..... ...+.+.+|++++++++||||+++++++.. .+
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 35789999999999999999999864 56799998865422 234568899999999999999999998755 67
Q ss_pred ccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCC---eEEee
Q 007455 381 TKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLE---PHVSD 457 (603)
Q Consensus 381 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~D 457 (603)
..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred eEEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 78999999999999999987543 23488889999999999999999998 8999999999999997765 99999
Q ss_pred cccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhh--
Q 007455 458 FGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLK-- 535 (603)
Q Consensus 458 fG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-- 535 (603)
||++........ .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ...|......
T Consensus 168 FG~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~ 240 (676)
T 3qa8_A 168 LGYAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKS 240 (676)
T ss_dssp CCCCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC---
T ss_pred cccccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhccc
Confidence 999987654332 2445789999999999999999999999999999999999999975311 1111100000
Q ss_pred ------hCcchhh--hccc---CCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 007455 536 ------ENRLEDV--IDKR---CADADMETVEAILEIAARCTDANPDDRPSMNQV 579 (603)
Q Consensus 536 ------~~~~~~~--~~~~---~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ev 579 (603)
....... +... ........+..+.+++.+||..||++|||++|+
T Consensus 241 ~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 241 NEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp ---CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred chhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0000000 0000 111334567889999999999999999999773
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=8.6e-37 Score=305.94 Aligned_cols=231 Identities=15% Similarity=0.092 Sum_probs=183.0
Q ss_pred hCCCCCCeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCCh---HHHHHHHHHHHhhCCCCeeeecceeeecCCccEEEE
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGS---DQVFERELEILGSIKHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 386 (603)
++|++.+.||+|+||.||+|.+.. ++.||||++....... .+.+.+|+.++.+++||||+++++++...+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 468889999999999999999975 5679999997654332 256899999999999999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||+++++|.++++.. ....++..++.|++.||+|||++ +|+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 999999999998642 34557889999999999999999 89999999999999999999998544
Q ss_pred CCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhccc
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKR 546 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (603)
|++ .++.++||||||+++|||++|+.||........... ....+...
T Consensus 175 --------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~------------~~~~~~~~ 221 (286)
T 3uqc_A 175 --------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP------------AERDTAGQ 221 (286)
T ss_dssp --------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE------------CCBCTTSC
T ss_pred --------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH------------HHHHhccC
Confidence 333 367899999999999999999999976432211100 00000000
Q ss_pred CC---CcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHhhcccCCC
Q 007455 547 CA---DADMETVEAILEIAARCTDANPDDRPSMNQVLQLLEQEVMSPC 591 (603)
Q Consensus 547 ~~---~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 591 (603)
.. ......+.++.+++.+||+.||++| |++|+++.|++......
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 00 0112345679999999999999999 99999999998664433
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-36 Score=339.86 Aligned_cols=237 Identities=20% Similarity=0.320 Sum_probs=190.8
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC--CCCEEEEEEeCCCCC-ChHHHHHHHHHHHhhCCCCeeeecceeeecCCc-----c
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN--DCGTFAVKRIDRSRE-GSDQVFERELEILGSIKHINLVNLRGYCRLPAT-----K 382 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~ 382 (603)
++|++.+.||+|+||.||+|.+. +++.||||++..... .....+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57888999999999999999986 467799998865432 234568899999999999999999999987665 6
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
|+||||+++++|.+++.. .+++.+++.++.|++.||.|||++ +|+||||||+|||++.+ .+||+|||+++
T Consensus 160 ~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence 999999999999987754 389999999999999999999999 89999999999999986 89999999998
Q ss_pred ccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhh
Q 007455 463 LLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDV 542 (603)
Q Consensus 463 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (603)
..... ....||+.|+|||++.+. ++.++||||||+++|||++|..||.........
T Consensus 230 ~~~~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~------------------ 285 (681)
T 2pzi_A 230 RINSF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------------------ 285 (681)
T ss_dssp ETTCC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC------------------
T ss_pred hcccC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccccc------------------
Confidence 76443 345699999999998765 488999999999999999999887643211100
Q ss_pred hcccCCCcCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHHhh
Q 007455 543 IDKRCADADMETVEAILEIAARCTDANPDDRPS-MNQVLQLLEQ 585 (603)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-~~evl~~L~~ 585 (603)
........+..+.+++.+||+.||++||+ ++++.+.|.+
T Consensus 286 ----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 286 ----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 00011123357899999999999999995 6666665554
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.1e-35 Score=300.23 Aligned_cols=233 Identities=21% Similarity=0.299 Sum_probs=181.1
Q ss_pred hhCCCCC-CeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCChHHHHHHHHHHH-hhCCCCeeeecceeeec----CCcc
Q 007455 310 LEALDEE-DVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREGSDQVFERELEIL-GSIKHINLVNLRGYCRL----PATK 382 (603)
Q Consensus 310 ~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 382 (603)
.++|.+. +.||+|+||.||+|.+. .+..||+|.+.. ...+.+|+.++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3566666 77999999999999986 456799999853 24577899888 55689999999999876 6678
Q ss_pred EEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECC---CCCeEEeecc
Q 007455 383 LLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDE---NLEPHVSDFG 459 (603)
Q Consensus 383 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG 459 (603)
++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 999999999999999987532 3489999999999999999999999 8999999999999998 7889999999
Q ss_pred cccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcc
Q 007455 460 LAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRL 539 (603)
Q Consensus 460 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (603)
++.... +..++.++||||+|+++|||++|+.||........ ....
T Consensus 166 ~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------------~~~~ 210 (299)
T 3m2w_A 166 FAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------------SPGM 210 (299)
T ss_dssp TCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------------CCS
T ss_pred cccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------------hHHH
Confidence 986532 13467899999999999999999999965321100 0000
Q ss_pred hhhhcccCCCcC----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH--HHhhcc
Q 007455 540 EDVIDKRCADAD----METVEAILEIAARCTDANPDDRPSMNQVLQ--LLEQEV 587 (603)
Q Consensus 540 ~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~P~~RPs~~evl~--~L~~~~ 587 (603)
...+.......+ ...+.++.+++.+||+.||++|||++|+++ .+.+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 211 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp CCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred HHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 011111111111 124567999999999999999999999997 455443
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-36 Score=318.31 Aligned_cols=241 Identities=17% Similarity=0.171 Sum_probs=178.9
Q ss_pred hCCCCCCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCCC---hHHHHHHHHHHHhhCCC-Ceeeec---------cee-
Q 007455 311 EALDEEDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSREG---SDQVFERELEILGSIKH-INLVNL---------RGY- 375 (603)
Q Consensus 311 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h-~niv~l---------~~~- 375 (603)
.+|...+.||+|+||.||+|.+. .+..||||++...... ..+.+.+|+.+++.+.| +|.... ...
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45677889999999999999976 4567999998743322 24678999999999977 221111 111
Q ss_pred -----------eec-----CCccEEEEEecCCCCcccccccc---CCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 007455 376 -----------CRL-----PATKLLIYDYLSMGSLDDFLHEH---GEGQQLLNWSARLKIALGSARGLAYLHHDCCPKII 436 (603)
Q Consensus 376 -----------~~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 436 (603)
+.. ....+++|+++ +++|.++++.. ......+++..++.++.|+++||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 111 12345666655 56999888521 22234478889999999999999999999 899
Q ss_pred EecCCCCCeEECCCCCeEEeecccccccCCCCcceeecccccccccCcccc----------ccCCCCcccchHhHHHHHH
Q 007455 437 HRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYL----------QSGRATEKSDVYSFGVLLL 506 (603)
Q Consensus 437 H~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~slG~vl~ 506 (603)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998865332 344567 999999999 5556788999999999999
Q ss_pred HHHhCCCCCCcccccCCccHhHHHHHHhhhCcchhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 007455 507 ELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVL 580 (603)
Q Consensus 507 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl 580 (603)
||++|+.||........ ....+. ... ..+.++.+++.+||+.||++|||+.|++
T Consensus 309 elltg~~Pf~~~~~~~~---------------~~~~~~-~~~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGG---------------SEWIFR-SCK----NIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHSSCCCCTTGGGSC---------------SGGGGS-SCC----CCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHCCCCCCCcchhhh---------------HHHHHh-hcc----cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 99999999975432111 111111 111 2346799999999999999999977764
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.3e-36 Score=309.20 Aligned_cols=240 Identities=17% Similarity=0.178 Sum_probs=182.6
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCC--------ChHHHHHHHHHHHhhCC----------------
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE--------GSDQVFERELEILGSIK---------------- 365 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------------- 365 (603)
.++|++.+.||+|+||.||+|++ .+..||||++..... ...+.+.+|+.+++.++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788899999999999999998 457899999965422 22367899999999886
Q ss_pred ----------CCeeeecceeeec-------------CCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHH
Q 007455 366 ----------HINLVNLRGYCRL-------------PATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSAR 422 (603)
Q Consensus 366 ----------h~niv~l~~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~ 422 (603)
||||+++++++.. .+..++||||+++|++.+.+.. ..+++..+..++.|++.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 4555555555544 6789999999999987776643 23799999999999999
Q ss_pred HHHHHH-hCCCCCeEEecCCCCCeEECCCC--------------------CeEEeecccccccCCCCcceeecccccccc
Q 007455 423 GLAYLH-HDCCPKIIHRDIKSSNILLDENL--------------------EPHVSDFGLAKLLVDEEAHVTTVVAGTFGY 481 (603)
Q Consensus 423 ~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y 481 (603)
||+||| ++ +|+||||||+|||++.++ .+||+|||+++..... ...||+.|
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y 243 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVS 243 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCT
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecc
Confidence 999999 88 899999999999999887 8999999999876432 24699999
Q ss_pred cCccccccCCCCcccchHhHHHH-HHHHHhCCCCCCcccccCCccHhHHHHHHhhhCcchh-hhcc-cCCCcCHHHHHHH
Q 007455 482 LAPEYLQSGRATEKSDVYSFGVL-LLELVTGKRPTDPTFVKRGLNVVGWMNTLLKENRLED-VIDK-RCADADMETVEAI 558 (603)
Q Consensus 482 ~aPE~~~~~~~~~~~Dv~slG~v-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~l 558 (603)
+|||++.+.. +.++||||+|++ .+++++|..||... .|.......- ... .... .........+.++
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV---------LWLHYLTDKM-LKQMTFKTKCNTPAMKQIKRKI 312 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH---------HHHHHHHHHH-HHTCCCSSCCCSHHHHHHHHHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch---------hhhhHHHHhh-hhhhccCcccchhhhhhcCHHH
Confidence 9999998765 889999998777 77899999987421 1211111100 000 0000 0111234567889
Q ss_pred HHHHHHcccCCCCCCCCHHHHH
Q 007455 559 LEIAARCTDANPDDRPSMNQVL 580 (603)
Q Consensus 559 ~~li~~cl~~~P~~RPs~~evl 580 (603)
.+|+.+||+.| |++|++
T Consensus 313 ~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHhccC-----CHHHHH
Confidence 99999999966 999988
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.3e-29 Score=276.69 Aligned_cols=184 Identities=16% Similarity=0.093 Sum_probs=128.2
Q ss_pred eeecCCeEEEEEEEC-CCCEEEEEEeCCCCC----------ChHHHHHHHHHHHhhC-CCCeeeecceeeecCCccEEEE
Q 007455 319 VGSGGFGTVYRMVMN-DCGTFAVKRIDRSRE----------GSDQVFERELEILGSI-KHINLVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 319 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 386 (603)
.+.|+.|.+..++.. -+..+++|.+..... ...++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 455666655554432 345699999864321 1224689999999999 6999999999999999999999
Q ss_pred EecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCC
Q 007455 387 DYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVD 466 (603)
Q Consensus 387 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~ 466 (603)
||++|++|.+++...+. ++.. +|+.||+.||+|+|++ |||||||||+|||++++|++||+|||+++....
T Consensus 322 Eyv~G~~L~d~i~~~~~----l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEE----IDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHTTCC----CCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHhCCC----CCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999987543 5543 5889999999999999 999999999999999999999999999987654
Q ss_pred CCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCC
Q 007455 467 EEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514 (603)
Q Consensus 467 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p 514 (603)
... .....+||+.|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus 392 ~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 392 DCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 322 2345679999999999975 567789999999998887765544
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=3.5e-27 Score=239.26 Aligned_cols=173 Identities=32% Similarity=0.556 Sum_probs=159.4
Q ss_pred CChhhHHHHHHHHHhCCCCCCCCCCCCCCCCCCcc--ccceeecCCC--CcEEEEEcCCCCccc--ccCCCccCCCCcce
Q 007455 25 ALTEDGMTLLEIKSSLNDSRNLLGNWQATEESPCK--WTGISCHTHD--QRVRSINLPYMQLGG--IISPSIGRLDKLQR 98 (603)
Q Consensus 25 ~~~~~~~~l~~~k~~~~~~~~~l~~w~~~~~~~c~--w~gv~C~~~~--~~l~~L~L~~n~l~~--~~~~~~~~l~~L~~ 98 (603)
|.++|+.||++||+++.||. .+.+|+. +.+||. |.||+|+... ++|+.|+|++|++++ .+|+.|.++++|++
T Consensus 3 c~~~~~~aL~~~k~~~~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCHHHHHHHHHHHHhcCCcc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 56789999999999998887 7899975 457888 9999998654 799999999999999 89999999999999
Q ss_pred EEecc-CCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCc
Q 007455 99 LALHQ-NSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNF 177 (603)
Q Consensus 99 L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~ 177 (603)
|+|++ |.+.+.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|++++.+|..+.++++|++|++++|+
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 99995 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCC-CCcccc-ccCcccccCC
Q 007455 178 FSGEIP-DFGALS-AFGNKSFIGN 199 (603)
Q Consensus 178 l~~~~~-~~~~l~-~l~~l~~~~n 199 (603)
+++.+| .+..+. +|+.|++++|
T Consensus 161 l~~~~p~~l~~l~~~L~~L~L~~N 184 (313)
T 1ogq_A 161 ISGAIPDSYGSFSKLFTSMTISRN 184 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSS
T ss_pred ccCcCCHHHhhhhhcCcEEECcCC
Confidence 997666 477777 8888888887
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=6.3e-27 Score=254.06 Aligned_cols=184 Identities=19% Similarity=0.201 Sum_probs=146.5
Q ss_pred CCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCCh--------HHHHHHHHHHHhhCCCCeeeecceeeecCCccEEE
Q 007455 314 DEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGS--------DQVFERELEILGSIKHINLVNLRGYCRLPATKLLI 385 (603)
Q Consensus 314 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 385 (603)
...+.||+|+||.||+|.. .+..+++|+........ .+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467899999999999954 45788999875432211 23478999999999999999877777788889999
Q ss_pred EEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccC
Q 007455 386 YDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLV 465 (603)
Q Consensus 386 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~ 465 (603)
|||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. ++||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999875 458999999999999999 8999999999999999 99999999999875
Q ss_pred CCCcce------eecccccccccCcccccc--CCCCcccchHhHHHHHHHHHhCCCCC
Q 007455 466 DEEAHV------TTVVAGTFGYLAPEYLQS--GRATEKSDVYSFGVLLLELVTGKRPT 515 (603)
Q Consensus 466 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~p~ 515 (603)
...... .....||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 532221 235679999999999976 56788899999999988888877765
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=5.3e-24 Score=242.18 Aligned_cols=172 Identities=28% Similarity=0.392 Sum_probs=124.3
Q ss_pred ccCChhhHHHHHHHHHhCCCCCCCCCCCCCCCCCCccccceeecCCCCcEEEEEcCCCCcccc---cCCCccCCCCcceE
Q 007455 23 CLALTEDGMTLLEIKSSLNDSRNLLGNWQATEESPCKWTGISCHTHDQRVRSINLPYMQLGGI---ISPSIGRLDKLQRL 99 (603)
Q Consensus 23 ~~~~~~~~~~l~~~k~~~~~~~~~l~~w~~~~~~~c~w~gv~C~~~~~~l~~L~L~~n~l~~~---~~~~~~~l~~L~~L 99 (603)
..+.++|+.||++||+++.||. .+++|+ .+.+||+|.||+|+ .++|+.|+|+++++.|. +|+++.+|++|+.+
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~-~l~~W~-~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKN-LLPDWS-SNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTT-SSTTCC-TTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred ccCCHHHHHHHHHHHhhCCCcc-cccCCC-CCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 3346779999999999999998 899997 35689999999998 58999999999999997 77666666666666
Q ss_pred EeccCCCCCCCCCCccccCCCceEEeccccCCCCCcc--ccccccccceecccCCccCCCCCCCC-ccccccceeeccCC
Q 007455 100 ALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPA--NIGNLLFLTILDLSSNSLKGAIPSSL-GRLTHLHYLNLSTN 176 (603)
Q Consensus 100 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~l~l~~N 176 (603)
+++.|.+. .+|..|+++++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|++++|
T Consensus 83 ~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 83 FLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp ECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred CCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 66666665 4556666677777777777777666666 66667777777777776666666554 56666666666666
Q ss_pred cCcccCCC----CccccccCcccccCC
Q 007455 177 FFSGEIPD----FGALSAFGNKSFIGN 199 (603)
Q Consensus 177 ~l~~~~~~----~~~l~~l~~l~~~~n 199 (603)
++++.++. +..+++|+.|++++|
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n 188 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGN 188 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSS
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCC
Confidence 66655542 344555555555554
No 255
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=3.8e-23 Score=205.83 Aligned_cols=146 Identities=14% Similarity=0.100 Sum_probs=117.7
Q ss_pred hhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCC------------------ChHHHHHHHHHHHhhCCCCeeee
Q 007455 310 LEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE------------------GSDQVFERELEILGSIKHINLVN 371 (603)
Q Consensus 310 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~niv~ 371 (603)
...|.+.+.||+|+||.||+|.+.++..||+|.+..... .....+.+|++++++++ | ++
T Consensus 89 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~ 165 (282)
T 1zar_A 89 GKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA 165 (282)
T ss_dssp TSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred CeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence 345556699999999999999996677899999864321 12456889999999999 5 67
Q ss_pred cceeeecCCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC
Q 007455 372 LRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451 (603)
Q Consensus 372 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 451 (603)
+.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|||++ ++
T Consensus 166 v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~ 229 (282)
T 1zar_A 166 VPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EE 229 (282)
T ss_dssp SCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TT
T ss_pred cCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CC
Confidence 7776544 56799999999999998 432 12346999999999999998 899999999999999 99
Q ss_pred CeEEeecccccccCCCCcceeecccccccccCccccc
Q 007455 452 EPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQ 488 (603)
Q Consensus 452 ~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 488 (603)
.+||+|||+++. +..++|||++.
T Consensus 230 ~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 230 GIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp EEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred cEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 999999999863 34467888775
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=7.7e-24 Score=240.25 Aligned_cols=167 Identities=23% Similarity=0.314 Sum_probs=145.8
Q ss_pred hhhHHHHHHHHHhCCCCCCCCCCCCCCC----CCC--ccc------------cceeecCCCCcEEEEEcCCCCcccccCC
Q 007455 27 TEDGMTLLEIKSSLNDSRNLLGNWQATE----ESP--CKW------------TGISCHTHDQRVRSINLPYMQLGGIISP 88 (603)
Q Consensus 27 ~~~~~~l~~~k~~~~~~~~~l~~w~~~~----~~~--c~w------------~gv~C~~~~~~l~~L~L~~n~l~~~~~~ 88 (603)
.+|+.||++||+++.+| +|+.++ .+| |.| .||+|+. .++|+.|+|++|+|+|.+|+
T Consensus 268 ~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 268 IKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECG
T ss_pred hHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCch
Confidence 46999999999999877 786554 355 999 9999986 57999999999999999999
Q ss_pred CccCCCCcceEEe-ccCCCCCC----------------------------------------------------------
Q 007455 89 SIGRLDKLQRLAL-HQNSLHGS---------------------------------------------------------- 109 (603)
Q Consensus 89 ~~~~l~~L~~L~L-~~N~l~~~---------------------------------------------------------- 109 (603)
+|++|++|+.|+| ++|.++|.
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 9999999999999 77765443
Q ss_pred ------------------CCCCccccCCCceEEeccccCCC-----------------CCccccc--cccccceecccCC
Q 007455 110 ------------------IPNEITNCTELRALYLRANYLQG-----------------GIPANIG--NLLFLTILDLSSN 152 (603)
Q Consensus 110 ------------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~l~~N 152 (603)
+|..|+++++|+.|+|++|+|+| .+|+.++ ++++|+.|+|++|
T Consensus 422 ~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N 501 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNC 501 (876)
T ss_dssp CCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESC
T ss_pred ccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCC
Confidence 78889999999999999999997 3899987 9999999999999
Q ss_pred ccCCCCCCCCccccccceeeccCCc-Ccc-cCC-CCcccc-------ccCcccccCC
Q 007455 153 SLKGAIPSSLGRLTHLHYLNLSTNF-FSG-EIP-DFGALS-------AFGNKSFIGN 199 (603)
Q Consensus 153 ~l~~~~p~~~~~l~~L~~l~l~~N~-l~~-~~~-~~~~l~-------~l~~l~~~~n 199 (603)
++.+.+|..|.++++|+.|+|++|+ |++ .+| .++.+. +|+.|++++|
T Consensus 502 ~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N 558 (876)
T 4ecn_A 502 PNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYN 558 (876)
T ss_dssp TTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSS
T ss_pred CCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCC
Confidence 9999999999999999999999998 987 444 455555 7888877776
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.87 E-value=2.8e-23 Score=211.86 Aligned_cols=174 Identities=19% Similarity=0.235 Sum_probs=151.3
Q ss_pred ccCChhhHHHHHHHHHhC-CCCCCCCCCCC---CCCCCCccccceeec--------CCCCcEEEEEcCCCCcccccCCCc
Q 007455 23 CLALTEDGMTLLEIKSSL-NDSRNLLGNWQ---ATEESPCKWTGISCH--------THDQRVRSINLPYMQLGGIISPSI 90 (603)
Q Consensus 23 ~~~~~~~~~~l~~~k~~~-~~~~~~l~~w~---~~~~~~c~w~gv~C~--------~~~~~l~~L~L~~n~l~~~~~~~~ 90 (603)
+.+..+|+.||++||..+ .|+.+.+++|. ....++|.|.|+.|. ....+|+.|+|++|+++. +|+.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~~-lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLPQ-FPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCSS-CCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCchh-cChhh
Confidence 335667999999999998 57777788994 345678999999994 234689999999999984 78889
Q ss_pred cCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCCccCCCCCCCCcc------
Q 007455 91 GRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGR------ 164 (603)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~------ 164 (603)
+++++|++|+|++|.|+ .+|..|+++++|++|+|++|+|+ .+|..+.++++|+.|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 99999999999999999 89999999999999999999999 88999999999999999999988899988765
Q ss_pred ---ccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 165 ---LTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 165 ---l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
+++|+.|++++|+|+..+..+..+++|+.|++++|
T Consensus 179 ~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N 216 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNS 216 (328)
T ss_dssp EEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESS
T ss_pred hccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCC
Confidence 89999999999999977667888888888888887
No 258
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.87 E-value=6.1e-23 Score=228.24 Aligned_cols=170 Identities=24% Similarity=0.335 Sum_probs=149.7
Q ss_pred hhhHHHHHHHHHhCCCCCCC--------CCCCCCCCCCCccc---cceeecCCCCcEEEEEcCCCCcccccCCCccCCCC
Q 007455 27 TEDGMTLLEIKSSLNDSRNL--------LGNWQATEESPCKW---TGISCHTHDQRVRSINLPYMQLGGIISPSIGRLDK 95 (603)
Q Consensus 27 ~~~~~~l~~~k~~~~~~~~~--------l~~w~~~~~~~c~w---~gv~C~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~ 95 (603)
..|+.||.+|++++.++... ..+|+. +.+||.| .||+|+.. ++|+.|+|++|+++|.+|++|++|++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCcc
Confidence 35999999999999766432 347985 4788999 99999764 79999999999999999999999999
Q ss_pred cceEEeccCC----------------------------------------------------------------------
Q 007455 96 LQRLALHQNS---------------------------------------------------------------------- 105 (603)
Q Consensus 96 L~~L~L~~N~---------------------------------------------------------------------- 105 (603)
|++|+|++|.
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 9999999984
Q ss_pred --------CCCCCCCCccccCCCceEEeccccCCCC-----------------Cccccc--cccccceecccCCccCCCC
Q 007455 106 --------LHGSIPNEITNCTELRALYLRANYLQGG-----------------IPANIG--NLLFLTILDLSSNSLKGAI 158 (603)
Q Consensus 106 --------l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~ 158 (603)
|+| +|..|+++++|++|+|++|+|+|. +|+.++ ++++|++|+|++|++.+.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 444 888899999999999999999985 999999 9999999999999999999
Q ss_pred CCCCccccccceeeccCCc-Ccc-c-CCCCccc------cccCcccccCC
Q 007455 159 PSSLGRLTHLHYLNLSTNF-FSG-E-IPDFGAL------SAFGNKSFIGN 199 (603)
Q Consensus 159 p~~~~~l~~L~~l~l~~N~-l~~-~-~~~~~~l------~~l~~l~~~~n 199 (603)
|..|.++++|+.|++++|+ +++ . |..++.+ ++|+.|++++|
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n 315 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYN 315 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSS
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCC
Confidence 9999999999999999998 997 4 4456665 78888888877
No 259
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.86 E-value=8.2e-22 Score=190.21 Aligned_cols=152 Identities=25% Similarity=0.309 Sum_probs=133.4
Q ss_pred CCCCccccceeecCC---------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEE
Q 007455 54 EESPCKWTGISCHTH---------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALY 124 (603)
Q Consensus 54 ~~~~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 124 (603)
..+.|+|++|.|++. ..+++.|+|++|+|+++.|..|..+++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEE
Confidence 457899999999752 25799999999999999999999999999999999999855556789999999999
Q ss_pred eccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccC
Q 007455 125 LRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLC 203 (603)
Q Consensus 125 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~ 203 (603)
|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++. +..+++|+.|++.
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~------ 167 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLF------ 167 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECT------
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEee------
Confidence 9999999777777899999999999999999 8899999999999999999999988875 6677777766555
Q ss_pred CCCCCCCCC
Q 007455 204 GRQVHKPCR 212 (603)
Q Consensus 204 ~~~~~~~c~ 212 (603)
+||+.|+|+
T Consensus 168 ~N~~~c~c~ 176 (229)
T 3e6j_A 168 GNPWDCECR 176 (229)
T ss_dssp TSCBCTTBG
T ss_pred CCCccCCcc
Confidence 557777774
No 260
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.86 E-value=1.4e-21 Score=187.41 Aligned_cols=152 Identities=20% Similarity=0.271 Sum_probs=134.0
Q ss_pred CCCccccceeecCC---------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEe
Q 007455 55 ESPCKWTGISCHTH---------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYL 125 (603)
Q Consensus 55 ~~~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 125 (603)
.|.|.|..|.|.+. ..+++.|+|++|+|+++.+..|..+++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 8 ~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 87 (220)
T 2v9t_B 8 ACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVL 87 (220)
T ss_dssp TSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEEC
T ss_pred CCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEEC
Confidence 35589999999752 247999999999999988889999999999999999999888999999999999999
Q ss_pred ccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccCC
Q 007455 126 RANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLCG 204 (603)
Q Consensus 126 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~~ 204 (603)
++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.+++ |..+++|+.+++.+|
T Consensus 88 s~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N----- 162 (220)
T 2v9t_B 88 YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN----- 162 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS-----
T ss_pred CCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCC-----
Confidence 99999966666689999999999999999988899999999999999999999999885 777778877766655
Q ss_pred CCCCCCCC
Q 007455 205 RQVHKPCR 212 (603)
Q Consensus 205 ~~~~~~c~ 212 (603)
||.|+|.
T Consensus 163 -~~~c~c~ 169 (220)
T 2v9t_B 163 -PFICDCH 169 (220)
T ss_dssp -CEECSGG
T ss_pred -CcCCCCc
Confidence 6666664
No 261
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=8.4e-21 Score=180.29 Aligned_cols=147 Identities=22% Similarity=0.228 Sum_probs=129.8
Q ss_pred CCCccccceeecCC---------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEe
Q 007455 55 ESPCKWTGISCHTH---------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYL 125 (603)
Q Consensus 55 ~~~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 125 (603)
.|.|.|.+|.|... ..++++|+|++|+++++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 4 ~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNL 83 (208)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEEC
Confidence 45689999999753 247999999999999988888999999999999999999666667899999999999
Q ss_pred ccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcc
Q 007455 126 RANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLD 201 (603)
Q Consensus 126 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~ 201 (603)
++|+|++..+..|..+++|+.|+|++|+|++..+..|.++++|+.|++++|+|++.++. +..+++|+.|++.+|..
T Consensus 84 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 160 (208)
T 2o6s_A 84 STNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 160 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred CCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCe
Confidence 99999977777789999999999999999977777789999999999999999998876 77888888888877743
No 262
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=4.9e-21 Score=183.54 Aligned_cols=152 Identities=18% Similarity=0.267 Sum_probs=132.5
Q ss_pred CCCccccceeecCC---------CCcEEEEEcCCCCcccccC-CCccCCCCcceEEeccCCCCCCCCCCccccCCCceEE
Q 007455 55 ESPCKWTGISCHTH---------DQRVRSINLPYMQLGGIIS-PSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALY 124 (603)
Q Consensus 55 ~~~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 124 (603)
.|.|.|..+.|++. ...++.|+|++|+|+++.+ ..|..+++|++|+|++|+|++..|..|.++++|++|+
T Consensus 8 ~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 87 (220)
T 2v70_A 8 KCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEIL 87 (220)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEE
Confidence 35588999999643 2367899999999999865 4589999999999999999977777899999999999
Q ss_pred eccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccC
Q 007455 125 LRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLC 203 (603)
Q Consensus 125 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~ 203 (603)
|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.+|. |..+++|+.|++++|
T Consensus 88 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N---- 163 (220)
T 2v70_A 88 LTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN---- 163 (220)
T ss_dssp CCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSC----
T ss_pred CCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCc----
Confidence 999999988888899999999999999999988899999999999999999999999664 777788877766555
Q ss_pred CCCCCCCCC
Q 007455 204 GRQVHKPCR 212 (603)
Q Consensus 204 ~~~~~~~c~ 212 (603)
||.|+|.
T Consensus 164 --~l~c~c~ 170 (220)
T 2v70_A 164 --PFNCNCY 170 (220)
T ss_dssp --CEECSGG
T ss_pred --CCcCCCc
Confidence 6666664
No 263
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.84 E-value=1.1e-20 Score=184.92 Aligned_cols=130 Identities=27% Similarity=0.259 Sum_probs=116.6
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|+++++.+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 46889999999999988888999999999999999999878888999999999999999999777788899999999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
++|+|++..+..|..+++|+.|+|++|+|++.++. |..+++|+.|++++|
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 165 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTN 165 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCC
Confidence 99999976666788999999999999999988884 888889998888887
No 264
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.82 E-value=7.1e-20 Score=181.33 Aligned_cols=130 Identities=26% Similarity=0.322 Sum_probs=109.5
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|+++++.+..|.++++|++|+|++|+|+...+..|.++++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 36889999999999887778999999999999999998555555788999999999999999766677788889999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
++|++++..+..|..+++|+.|+|++|+|++.++. |..+++|+.|++++|
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 167 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNN 167 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCC
Confidence 99998877777788888888888888888887765 677788888888777
No 265
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=2.4e-20 Score=192.83 Aligned_cols=157 Identities=22% Similarity=0.208 Sum_probs=138.0
Q ss_pred CCccccceeecCC---------CCcEEEEEcCCCCcccccCCCcc-CCCCcceEEeccCCCCCCCCCCccccCCCceEEe
Q 007455 56 SPCKWTGISCHTH---------DQRVRSINLPYMQLGGIISPSIG-RLDKLQRLALHQNSLHGSIPNEITNCTELRALYL 125 (603)
Q Consensus 56 ~~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 125 (603)
|.|.+..|.|.+. ...++.|+|++|+|+++.+..+. ++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 16 C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 16 CLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp CEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 4478888999642 24588999999999998888888 9999999999999999777788999999999999
Q ss_pred ccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCCC----ccccccCcccccCC--
Q 007455 126 RANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDF----GALSAFGNKSFIGN-- 199 (603)
Q Consensus 126 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~----~~l~~l~~l~~~~n-- 199 (603)
++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++.+ ..+++|+.|++++|
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 999999777778999999999999999999888899999999999999999999987763 56888999988877
Q ss_pred ------------------cccCCCCCCCCCC
Q 007455 200 ------------------LDLCGRQVHKPCR 212 (603)
Q Consensus 200 ------------------~~l~~~~~~~~c~ 212 (603)
+++.+|||.|+|.
T Consensus 176 ~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 176 KKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 4678999999884
No 266
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=1.4e-19 Score=177.78 Aligned_cols=136 Identities=19% Similarity=0.172 Sum_probs=103.8
Q ss_pred CCCCCeeeecCCeEEEEEEE-CCCCE--EEEEEeCCCCCC------------------------hHHHHHHHHHHHhhCC
Q 007455 313 LDEEDVVGSGGFGTVYRMVM-NDCGT--FAVKRIDRSREG------------------------SDQVFERELEILGSIK 365 (603)
Q Consensus 313 ~~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 365 (603)
|.+.+.||+|+||.||+|.+ .++.. ||||+++..... ....+.+|+.++.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999998 56778 999987543111 0135889999999998
Q ss_pred CCee--eecceeeecCCccEEEEEecCC-C----CccccccccCCCCccCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEE
Q 007455 366 HINL--VNLRGYCRLPATKLLIYDYLSM-G----SLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLH-HDCCPKIIH 437 (603)
Q Consensus 366 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH 437 (603)
|+++ ..++++ ...++||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8864 333332 367899999953 4 44443322 123456789999999999999 87 8999
Q ss_pred ecCCCCCeEECCCCCeEEeeccccccc
Q 007455 438 RDIKSSNILLDENLEPHVSDFGLAKLL 464 (603)
Q Consensus 438 ~Dlkp~NIll~~~~~~kl~DfG~~~~~ 464 (603)
|||||+|||++. .++|+|||++...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999764
No 267
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=1.6e-19 Score=169.08 Aligned_cols=128 Identities=28% Similarity=0.382 Sum_probs=78.9
Q ss_pred CCCccccceeecCC---------CCcEEEEEcCCCCcccccCC-CccCCCCcceEEeccCCCCCCCCCCccccCCCceEE
Q 007455 55 ESPCKWTGISCHTH---------DQRVRSINLPYMQLGGIISP-SIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALY 124 (603)
Q Consensus 55 ~~~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 124 (603)
.|.|.|+.+.|++. ..+++.|+|++|+|+++.+. .|..+++|++|+|++|+|++..|..|.++++|++|+
T Consensus 5 ~C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 84 (192)
T 1w8a_A 5 MCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEE
Confidence 34577877777532 12556666666666665443 356666666666666666655566666666666666
Q ss_pred eccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccC
Q 007455 125 LRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEI 182 (603)
Q Consensus 125 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 182 (603)
|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 6666666555555666666666666666666655666666666666666666666543
No 268
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.77 E-value=2.5e-19 Score=203.61 Aligned_cols=141 Identities=38% Similarity=0.585 Sum_probs=133.6
Q ss_pred EEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCC
Q 007455 73 RSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSN 152 (603)
Q Consensus 73 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 152 (603)
..++++.|.++|.+|..+..+++|+.|||++|+++|.+|..|+++++|+.|+|++|+|+|.+|..|+++++|+.|||++|
T Consensus 611 ~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N 690 (768)
T 3rgz_A 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690 (768)
T ss_dssp CCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred cccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCC
Confidence 34567778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCCcccCCCCCCCCCCCC
Q 007455 153 SLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNLDLCGRQVHKPCRTS 214 (603)
Q Consensus 153 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~~l~~~~~~~~c~~~ 214 (603)
+++|.+|..+.++++|+.|++++|+|+|.+|..+.+.++....+.+|+.+||.|+. +|+..
T Consensus 691 ~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 691 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp CCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred cccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 99999999999999999999999999999999888899999999999999999987 78653
No 269
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.76 E-value=1.9e-18 Score=172.77 Aligned_cols=139 Identities=25% Similarity=0.226 Sum_probs=86.6
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|+|+++.+. ..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 55 ~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 3455555555555543221 45555666666666665 56666666667777777777776555566666777777777
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC-----------------cccCCCCCCCCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN-----------------LDLCGRQVHKPC 211 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n-----------------~~l~~~~~~~~c 211 (603)
++|+|++..+..|..+++|+.|+|++|+|++.++. |..+++|+.|++++| +++.+|||.|+|
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 77777655555566667777777777777766654 455666666666665 245666777776
No 270
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.76 E-value=3.2e-18 Score=167.42 Aligned_cols=136 Identities=27% Similarity=0.320 Sum_probs=121.2
Q ss_pred CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 69 DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
..++++|+|++|+|+++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 46899999999999999888999999999999999999977778899999999999999999977777789999999999
Q ss_pred ccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccCCCCCCCC
Q 007455 149 LSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLCGRQVHKP 210 (603)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~~~~~~~~ 210 (603)
|++|+|++..+..|..+++|+.|+|++|+|++.++. +..+++|+.|++.+| ++.|.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N------~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN------QFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSC------CBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCC------ceeCC
Confidence 999999977777899999999999999999998874 777778877766655 56655
No 271
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.76 E-value=3.8e-18 Score=169.03 Aligned_cols=131 Identities=26% Similarity=0.224 Sum_probs=93.6
Q ss_pred CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 69 DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
..++++|+|++|+++++.+..|.++++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 35677777777777776666677777777777777777755555677777777777777777766666667777777777
Q ss_pred ccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 149 LSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
|++|++++..+..+..+++|+.|++++|++++.++. +..+++|+.|++.+|
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 215 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 215 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCC
Confidence 777777766666667777777777777777776665 566666666665555
No 272
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.75 E-value=4.6e-19 Score=179.39 Aligned_cols=138 Identities=30% Similarity=0.452 Sum_probs=107.6
Q ss_pred cEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceeccc
Q 007455 71 RVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLS 150 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 150 (603)
+++.|+|++|++++.+|..+..++ |++|+|++|++++..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 455566666666555555555555 66666666666666666677777788888888887755554 7778888999999
Q ss_pred CCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCCcccCCCCCCCCC
Q 007455 151 SNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNLDLCGRQVHKPC 211 (603)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~~l~~~~~~~~c 211 (603)
+|+|++.+|..+..+++|+.|+|++|+|++.+|....+++|+.+++.+|..+|+.|+. .|
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 9999888999999999999999999999988888888999999999999999988775 45
No 273
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.75 E-value=3e-18 Score=158.18 Aligned_cols=129 Identities=27% Similarity=0.354 Sum_probs=68.6
Q ss_pred CCCccccceeecCCC---------CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEe
Q 007455 55 ESPCKWTGISCHTHD---------QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYL 125 (603)
Q Consensus 55 ~~~c~w~gv~C~~~~---------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 125 (603)
.|.|+|.+|.|.+.. .+++.|+|++|+++++.+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 4 ~C~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 83 (177)
T 2o6r_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYL 83 (177)
T ss_dssp TCEEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEEC
Confidence 355889999886421 24555555555555544444555555555555555555333334455555555555
Q ss_pred ccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCC
Q 007455 126 RANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIP 183 (603)
Q Consensus 126 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 183 (603)
++|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|++++|++++.++
T Consensus 84 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 84 HENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 5555554444444555555555555555553333334455555555555555554443
No 274
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=9.5e-18 Score=161.64 Aligned_cols=132 Identities=23% Similarity=0.269 Sum_probs=116.3
Q ss_pred ccceeecCCCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccc
Q 007455 60 WTGISCHTHDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIG 139 (603)
Q Consensus 60 w~gv~C~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 139 (603)
|..-.|+. +.++.++++++. +|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.
T Consensus 14 ~~~~~Cs~-----~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 85 (229)
T 3e6j_A 14 PSQCSCSG-----TTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFD 85 (229)
T ss_dssp CTTCEEET-----TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCCEEeC-----CEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcc
Confidence 44456854 569999999987 555554 8999999999999988899999999999999999999966667789
Q ss_pred cccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 140 NLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 140 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
.+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+.++..+..+++|+.|++++|
T Consensus 86 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N 145 (229)
T 3e6j_A 86 SLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQN 145 (229)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSS
T ss_pred cCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCC
Confidence 999999999999999977777789999999999999999988888999999999999888
No 275
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.74 E-value=8.4e-18 Score=166.55 Aligned_cols=129 Identities=27% Similarity=0.274 Sum_probs=117.9
Q ss_pred CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 69 DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
..++++|+|++|++++. +.+..+++|++|+|++|.|++..|..|.++++|++|+|++|++++..+..|..+++|+.|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 46799999999999984 4799999999999999999977777789999999999999999987788899999999999
Q ss_pred ccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 149 LSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
|++|++++..+..+..+++|+.|++++|+|++.++. +..+++|+.|++++|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 999999977777789999999999999999998876 688899999998887
No 276
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=4.9e-18 Score=162.55 Aligned_cols=125 Identities=22% Similarity=0.212 Sum_probs=111.8
Q ss_pred EEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCC
Q 007455 73 RSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSN 152 (603)
Q Consensus 73 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 152 (603)
+.+++++++++. +|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 468999999988 555554 79999999999999777778999999999999999999888999999999999999999
Q ss_pred ccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCc
Q 007455 153 SLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNL 200 (603)
Q Consensus 153 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~ 200 (603)
+|++..+..|..+++|+.|+|++|+|++.++. |..+++|+.|++++|.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 139 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNK 139 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCc
Confidence 99966666688999999999999999999775 8888999999988883
No 277
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.73 E-value=4.7e-18 Score=188.89 Aligned_cols=138 Identities=20% Similarity=0.219 Sum_probs=123.3
Q ss_pred ceeecCC---------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCC
Q 007455 62 GISCHTH---------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQG 132 (603)
Q Consensus 62 gv~C~~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 132 (603)
.|.|.+. +..+++|||++|+|+++.+.+|.++++|++|+|++|+|++..|++|.+|++|++|+|++|+|++
T Consensus 35 ~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~ 114 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 114 (635)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred EEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC
Confidence 4778642 2579999999999999888999999999999999999997777889999999999999999997
Q ss_pred CCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccC-C-CCccccccCcccccCC
Q 007455 133 GIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEI-P-DFGALSAFGNKSFIGN 199 (603)
Q Consensus 133 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~-~-~~~~l~~l~~l~~~~n 199 (603)
..+..|.+|++|++|+|++|+|++..+..|+++++|+.|+|++|+|++.. | .+..+++|+.|++++|
T Consensus 115 l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 183 (635)
T 4g8a_A 115 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 183 (635)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred CCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCc
Confidence 77778999999999999999999777778999999999999999998753 3 4778899999998887
No 278
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=6.3e-18 Score=158.19 Aligned_cols=131 Identities=23% Similarity=0.253 Sum_probs=113.8
Q ss_pred EEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCC-CccccCCCceEEeccccCCCCCccccccccccceecccC
Q 007455 73 RSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPN-EITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSS 151 (603)
Q Consensus 73 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 151 (603)
+.|++++|+|+. +|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 689999999976 6666654 999999999999965554 489999999999999999998899999999999999999
Q ss_pred CccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccCCCCCCCCCC
Q 007455 152 NSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLCGRQVHKPCR 212 (603)
Q Consensus 152 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~~~~~~~~c~ 212 (603)
|+|++..|..|.++++|+.|+|++|+|++.+|. +..+++|+.|++++| +|.|+|+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N------~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN------PFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTC------CBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCC------CccCcCc
Confidence 999988888899999999999999999998774 777788887766655 6666664
No 279
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.73 E-value=1e-17 Score=156.71 Aligned_cols=129 Identities=24% Similarity=0.269 Sum_probs=110.1
Q ss_pred EEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCCc
Q 007455 74 SINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSNS 153 (603)
Q Consensus 74 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 153 (603)
.+++++|+|+. +|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 46667778876 555553 68999999999998 888899999999999999999998888889999999999999999
Q ss_pred cCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccCCCCCCCCCC
Q 007455 154 LKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLCGRQVHKPCR 212 (603)
Q Consensus 154 l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~~~~~~~~c~ 212 (603)
|++..|..|..+++|+.|+|++|+|++.++. |..+++|+.+++.+| ||.|+|.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N------~~~C~c~ 143 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN------PLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSS------CEECSGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCC------CeecCCc
Confidence 9988888899999999999999999988875 777777777765554 6666664
No 280
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.73 E-value=1.5e-17 Score=166.18 Aligned_cols=140 Identities=23% Similarity=0.176 Sum_probs=127.2
Q ss_pred CCCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccce
Q 007455 67 THDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTI 146 (603)
Q Consensus 67 ~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 146 (603)
....+++.|+|++|+|+. +|..+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.
T Consensus 74 ~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152 (290)
T ss_dssp SCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCcCCEEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCE
Confidence 345689999999999986 7788999999999999999999777788999999999999999999777778899999999
Q ss_pred ecccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCCcccCCCCC
Q 007455 147 LDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNLDLCGRQV 207 (603)
Q Consensus 147 L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~~l~~~~~ 207 (603)
|+|++|+|++..+..|.++++|+.|+|++|+|+.+++.+..+.+|+.+.+.+|++.|++.+
T Consensus 153 L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 153 LSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (290)
T ss_dssp EECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred EECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCcc
Confidence 9999999996666677889999999999999999888888888999999999999998864
No 281
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.73 E-value=8e-18 Score=167.88 Aligned_cols=130 Identities=24% Similarity=0.201 Sum_probs=95.1
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCC-CCCCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNS-LHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
.++++|+|++|.++++.+..|..+++|++|+|++|. ++...|..|..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 467777777777777777777777777777777776 6645466777777777777777777766677777777777777
Q ss_pred ccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 149 LSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
|++|++++..+..|.++++|+.|++++|+|++.++. +..+++|+.|++++|
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 187 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQN 187 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCC
Confidence 777777755555677777777777777777776664 666677777777666
No 282
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.72 E-value=2.5e-17 Score=162.94 Aligned_cols=130 Identities=23% Similarity=0.229 Sum_probs=96.4
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.++++|+|++|+++.+.+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 56788888888887766666777888888888888887555556777788888888888887666666777777888888
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
++|+|++..+..|..+++|+.|++++|++++.++. |..+++|+.|++++|
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN 191 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCC
Confidence 88877755555577777777777777777777664 666777777776665
No 283
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.71 E-value=1.5e-17 Score=159.17 Aligned_cols=124 Identities=19% Similarity=0.147 Sum_probs=110.2
Q ss_pred EEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCC-CCccccCCCceEEeccccCCCCCccccccccccceecccC
Q 007455 73 RSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIP-NEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSS 151 (603)
Q Consensus 73 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 151 (603)
+.|++++|+++. +|..+. ..+++|+|++|+|++..| ..|..+++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 389999999988 566554 467899999999996655 4589999999999999999987788999999999999999
Q ss_pred CccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 152 NSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 152 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
|+|++..|..|..+++|+.|+|++|+|++.+|. |..+++|+.|++++|
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 139 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDN 139 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCC
Confidence 999988888899999999999999999999765 888999999998887
No 284
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=2.5e-17 Score=154.16 Aligned_cols=126 Identities=21% Similarity=0.265 Sum_probs=113.0
Q ss_pred CCCccccceeecCC---------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEe
Q 007455 55 ESPCKWTGISCHTH---------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYL 125 (603)
Q Consensus 55 ~~~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 125 (603)
.|.|.|..|.|++. ..+++.|+|++|+|+. +|..|.++++|+.|+|++|+|++..|..|.++++|++|+|
T Consensus 7 ~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~L 85 (193)
T 2wfh_A 7 ECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLIL 85 (193)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEEC
Confidence 35578888999642 2479999999999985 6689999999999999999999877888999999999999
Q ss_pred ccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCccc
Q 007455 126 RANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGE 181 (603)
Q Consensus 126 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 181 (603)
++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 86 s~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 86 SYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99999988888999999999999999999966666799999999999999999864
No 285
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=1.5e-17 Score=152.03 Aligned_cols=129 Identities=24% Similarity=0.209 Sum_probs=117.0
Q ss_pred CcEEEEEcCCCCcc-cccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 70 QRVRSINLPYMQLG-GIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 70 ~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
.+++.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57999999999998 67888899999999999999999955 6799999999999999999987898888899999999
Q ss_pred ccCCccCCCC-CCCCccccccceeeccCCcCcccCC----CCccccccCcccccCCc
Q 007455 149 LSSNSLKGAI-PSSLGRLTHLHYLNLSTNFFSGEIP----DFGALSAFGNKSFIGNL 200 (603)
Q Consensus 149 l~~N~l~~~~-p~~~~~l~~L~~l~l~~N~l~~~~~----~~~~l~~l~~l~~~~n~ 200 (603)
|++|+|++.. +..+..+++|+.|++++|++++.++ .+..+++|+.|++.+|.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 9999999532 2789999999999999999999888 58888999999988874
No 286
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.70 E-value=1.9e-17 Score=165.21 Aligned_cols=130 Identities=23% Similarity=0.232 Sum_probs=101.9
Q ss_pred CcEEEEEcCCCC-cccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 70 QRVRSINLPYMQ-LGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 70 ~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
.++++|+|++|. ++.+.+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 159 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLF 159 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEE
Confidence 568888888886 7776677788888888888888888876677788888888888888888866666678888888888
Q ss_pred ccCCccCCCCCCCCccccccceeeccCCcCcccCC-CCccccccCcccccCC
Q 007455 149 LSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIP-DFGALSAFGNKSFIGN 199 (603)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~~l~~l~~~~n 199 (603)
|++|++++..+..+..+++|+.|++++|++++.+| .+..+++|+.|++++|
T Consensus 160 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 160 LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 88888885555567788888888888888887755 4777777777777776
No 287
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.70 E-value=2.9e-17 Score=163.00 Aligned_cols=123 Identities=20% Similarity=0.249 Sum_probs=81.3
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.++++|+|++|+++++.+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..+..+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 46777777777777666666777777777777777776555566777777777777777777555556667777777777
Q ss_pred cCCccCCC-CCCCCccccccceeeccCCcCcccCCC-CccccccC
Q 007455 150 SSNSLKGA-IPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFG 192 (603)
Q Consensus 150 ~~N~l~~~-~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~ 192 (603)
++|++++. +|..+.++++|+.|++++|++++.++. +..+.+++
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 176 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc
Confidence 77777642 466666777777777777777665542 44444444
No 288
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=1.4e-17 Score=149.04 Aligned_cols=126 Identities=21% Similarity=0.211 Sum_probs=114.2
Q ss_pred CcEEEEEcCCCCcc-cccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 70 QRVRSINLPYMQLG-GIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 70 ~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
.+++.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 57999999999998 77888999999999999999999955 6799999999999999999987999888999999999
Q ss_pred ccCCccCCC-CCCCCccccccceeeccCCcCcccCC----CCccccccCccccc
Q 007455 149 LSSNSLKGA-IPSSLGRLTHLHYLNLSTNFFSGEIP----DFGALSAFGNKSFI 197 (603)
Q Consensus 149 l~~N~l~~~-~p~~~~~l~~L~~l~l~~N~l~~~~~----~~~~l~~l~~l~~~ 197 (603)
+++|++++. .+..+..+++|+.|++++|++++.++ .+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 999999963 34789999999999999999999887 47788888888775
No 289
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.69 E-value=2.1e-17 Score=176.23 Aligned_cols=144 Identities=25% Similarity=0.276 Sum_probs=127.9
Q ss_pred Cccccc--eeecCCC--------CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCC-CCCccccCCCceEEe
Q 007455 57 PCKWTG--ISCHTHD--------QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSI-PNEITNCTELRALYL 125 (603)
Q Consensus 57 ~c~w~g--v~C~~~~--------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L 125 (603)
.|.|.+ |.|+... .++++|+|++|.++++.|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|
T Consensus 7 ~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~L 86 (455)
T 3v47_A 7 ECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKL 86 (455)
T ss_dssp CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEEC
T ss_pred eeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeC
Confidence 466555 8886532 57999999999999999999999999999999999998666 567999999999999
Q ss_pred ccccCCCCCccccccccccceecccCCccCCCCCCC--CccccccceeeccCCcCcccCCC--CccccccCcccccCCc
Q 007455 126 RANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSS--LGRLTHLHYLNLSTNFFSGEIPD--FGALSAFGNKSFIGNL 200 (603)
Q Consensus 126 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~l~l~~N~l~~~~~~--~~~l~~l~~l~~~~n~ 200 (603)
++|++++..|..|.++++|++|+|++|++++.+|.. +.++++|+.|+|++|++++.+|. +..+++|+.|++++|.
T Consensus 87 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 87 DYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp TTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 999999888999999999999999999999855544 99999999999999999999775 7889999999998873
No 290
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.69 E-value=4.3e-17 Score=173.85 Aligned_cols=137 Identities=24% Similarity=0.259 Sum_probs=124.9
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|++++.+|..+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 47999999999999999999999999999999999999888889999999999999999999888999999999999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccCCCCCCCCCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLCGRQVHKPCR 212 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~~~~~~~~c~ 212 (603)
++|++++..|..|..+++|+.|++++|+|++.++. +..+++|+.|++++| |+.|+|+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N------~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN------PWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS------CBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCC------CcccCCC
Confidence 99999988899999999999999999999998875 577788877766655 6666664
No 291
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.69 E-value=6.5e-17 Score=160.45 Aligned_cols=130 Identities=20% Similarity=0.196 Sum_probs=119.5
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.++++|+|++|+++++.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|+.|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46999999999999988889999999999999999999777778999999999999999999888889999999999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCccc--CCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGE--IPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~--~~~~~~l~~l~~l~~~~n 199 (603)
++|++++..+..+.++++|+.|++++|++++. +..+..+++|+.|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N 159 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCC
Confidence 99999977777899999999999999999984 445888999999998887
No 292
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.69 E-value=2.2e-17 Score=166.51 Aligned_cols=129 Identities=19% Similarity=0.274 Sum_probs=65.1
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCC-CCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIP-NEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
.++++|+|++|++++ +|..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 78 ~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 345555555555554 33345555555555555555553222 2455555555555555555544444555555555555
Q ss_pred ccCCccCC-CCCCCCccccccceeeccCCcCcccCC-CCccccccCcccccCC
Q 007455 149 LSSNSLKG-AIPSSLGRLTHLHYLNLSTNFFSGEIP-DFGALSAFGNKSFIGN 199 (603)
Q Consensus 149 l~~N~l~~-~~p~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~~l~~l~~~~n 199 (603)
|++|.+++ .+|..+..+++|+.|++++|++++.+| .+..+++|+.|++++|
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 209 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 209 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCC
Confidence 55555543 344455555555555555555555433 2444445555544444
No 293
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.68 E-value=5.4e-17 Score=172.97 Aligned_cols=140 Identities=19% Similarity=0.174 Sum_probs=122.6
Q ss_pred ccceeecCC---------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccC
Q 007455 60 WTGISCHTH---------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYL 130 (603)
Q Consensus 60 w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 130 (603)
|..|.|.+. ..+++.|+|++|+|+++.+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 567888642 25799999999999999999999999999999999999988889999999999999999999
Q ss_pred CCCCccccccccccceecccCCccCCCCCCCCccccccceeeccC-CcCcccCCC-CccccccCcccccCC
Q 007455 131 QGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLST-NFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 131 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~-N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
++..+..|..+++|++|+|++|+|++..+..|.++++|+.|++++ |.++..++. |..+++|+.|++++|
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n 206 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMC 206 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTS
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCC
Confidence 977777799999999999999999976667899999999999998 556555553 778888888888877
No 294
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.68 E-value=6.1e-17 Score=179.19 Aligned_cols=145 Identities=22% Similarity=0.250 Sum_probs=128.2
Q ss_pred CCCccc----cceeecC---------CCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCc
Q 007455 55 ESPCKW----TGISCHT---------HDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELR 121 (603)
Q Consensus 55 ~~~c~w----~gv~C~~---------~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 121 (603)
.+||.| ..|.|.+ ...++++|+|++|+++++.+..|.++++|++|+|++|+|++..|..|.++++|+
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 356655 3477854 235799999999999999888999999999999999999988888999999999
Q ss_pred eEEeccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcc--cCCCCccccccCcccccCC
Q 007455 122 ALYLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSG--EIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 122 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~--~~~~~~~l~~l~~l~~~~n 199 (603)
+|+|++|++++..|..|.++++|++|+|++|++++..|..++++++|++|++++|++++ .|..++.+++|+.|++++|
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 99999999998889999999999999999999997777889999999999999999986 3455889999999999887
No 295
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.68 E-value=4e-17 Score=166.58 Aligned_cols=141 Identities=11% Similarity=0.054 Sum_probs=99.1
Q ss_pred CCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCC--------------ChHHHHHHHHHHHhhCCCCeeeecceeee
Q 007455 312 ALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSRE--------------GSDQVFERELEILGSIKHINLVNLRGYCR 377 (603)
Q Consensus 312 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 377 (603)
-|.+.+.||+|+||.||+|.+.+|+.||||+++.... ........+.+++....|+|+.+++....
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3788899999999999999999999999998753210 01112222333333333444444332211
Q ss_pred ------cCCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCC
Q 007455 378 ------LPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENL 451 (603)
Q Consensus 378 ------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 451 (603)
.....++||||++|++|.++... .....++.|++.+|.|||+. +||||||||.|||+++++
T Consensus 176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 176 PVPEPIAQSRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEK 242 (397)
T ss_dssp SCCCEEEEETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEE
T ss_pred CCCeeeeccCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCC
Confidence 11234799999999888765432 12356789999999999998 899999999999998876
Q ss_pred C----------eEEeecccccccC
Q 007455 452 E----------PHVSDFGLAKLLV 465 (603)
Q Consensus 452 ~----------~kl~DfG~~~~~~ 465 (603)
. +.|+||+.+....
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEETT
T ss_pred CcccccccccceEEEEeCCcccCC
Confidence 3 8999999876543
No 296
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.67 E-value=7.2e-17 Score=173.23 Aligned_cols=141 Identities=21% Similarity=0.229 Sum_probs=127.5
Q ss_pred cccceeecCC---------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEecccc
Q 007455 59 KWTGISCHTH---------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANY 129 (603)
Q Consensus 59 ~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 129 (603)
.|..|.|.+. ..+++.|+|++|+|+++.+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3678999642 2478999999999999989999999999999999999998889999999999999999999
Q ss_pred CCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCC-CCccccccCcccccCC
Q 007455 130 LQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIP-DFGALSAFGNKSFIGN 199 (603)
Q Consensus 130 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~~l~~l~~~~n 199 (603)
|++..+..|.++++|+.|+|++|++++..|..|.++++|+.|++++|++++..+ .|..+++|+.|++++|
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 162 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC 162 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESC
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCC
Confidence 996666678999999999999999998888999999999999999999998876 4888899999988887
No 297
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.67 E-value=5.8e-17 Score=166.91 Aligned_cols=143 Identities=24% Similarity=0.331 Sum_probs=124.2
Q ss_pred CCCccccceeecCC-----------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceE
Q 007455 55 ESPCKWTGISCHTH-----------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRAL 123 (603)
Q Consensus 55 ~~~c~w~gv~C~~~-----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 123 (603)
.++|.|.|+ |+.. ..++++|+|++|+++++.+..|.++++|++|+|++|+|++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 466889887 5421 2479999999999999888899999999999999999998778889999999999
Q ss_pred EeccccCCCCCccccccccccceecccCCccCCCCCC--CCccccccceeeccCC-cCcccCC-CCccccccCcccccCC
Q 007455 124 YLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPS--SLGRLTHLHYLNLSTN-FFSGEIP-DFGALSAFGNKSFIGN 199 (603)
Q Consensus 124 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~l~l~~N-~l~~~~~-~~~~l~~l~~l~~~~n 199 (603)
+|++|+|++..+..|.++++|++|+|++|+++ .+|. .+.++++|+.|++++| .+++.++ .+..+++|+.|++++|
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 99999999655555999999999999999999 5554 7999999999999999 5777765 4888899999988887
No 298
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.67 E-value=5.1e-17 Score=177.56 Aligned_cols=142 Identities=22% Similarity=0.290 Sum_probs=125.9
Q ss_pred CccccceeecCC-----------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEe
Q 007455 57 PCKWTGISCHTH-----------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYL 125 (603)
Q Consensus 57 ~c~w~gv~C~~~-----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 125 (603)
.|.|.|+ |+.. ..++++|+|++|+++++.|..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5899988 7532 247999999999999999999999999999999999999888889999999999999
Q ss_pred ccccCCCCCccccccccccceecccCCccCC-CCCCCCccccccceeeccCCc-CcccCC-CCccccccCcccccCC
Q 007455 126 RANYLQGGIPANIGNLLFLTILDLSSNSLKG-AIPSSLGRLTHLHYLNLSTNF-FSGEIP-DFGALSAFGNKSFIGN 199 (603)
Q Consensus 126 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~l~l~~N~-l~~~~~-~~~~l~~l~~l~~~~n 199 (603)
++|++++..|..|+++++|++|+|++|++++ ..|..+.++++|+.|++++|+ +...++ .+..+++|+.|++++|
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n 158 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKAL 158 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCC
Confidence 9999998777789999999999999999996 457789999999999999998 454543 5888889999988877
No 299
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.67 E-value=5.4e-17 Score=165.22 Aligned_cols=130 Identities=22% Similarity=0.349 Sum_probs=118.6
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCcccccc---------
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGN--------- 140 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--------- 140 (603)
.++++|+|++|+++ .+|..++++++|++|+|++|+|+ .+|..|.++++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 57999999999999 68889999999999999999999 88999999999999999999988899988765
Q ss_pred ccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCCccc
Q 007455 141 LLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNLDL 202 (603)
Q Consensus 141 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~~l 202 (603)
+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|++++.++.+..+++|+.|++++|...
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~ 242 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTAL 242 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcch
Confidence 999999999999999 8898999999999999999999998888889999999999887443
No 300
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.67 E-value=9.5e-17 Score=170.46 Aligned_cols=142 Identities=25% Similarity=0.281 Sum_probs=90.5
Q ss_pred CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCC-------------------------ccccCCCceE
Q 007455 69 DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNE-------------------------ITNCTELRAL 123 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-------------------------~~~l~~L~~L 123 (603)
..++++|+|++|+|+++.+..|..+++|++|+|++|+|++..+.. |.++++|++|
T Consensus 111 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 111 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp CSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred CccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 356788888888887766667777777777777777776433323 4445555555
Q ss_pred EeccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC---
Q 007455 124 YLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN--- 199 (603)
Q Consensus 124 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n--- 199 (603)
+|++|+|+ .+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|++++|
T Consensus 191 ~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 191 NLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp ECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred cCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 55555555 344 255566666666666666655566666666666666666666666553 556666666666655
Q ss_pred ---------------cccCCCCCCCCCC
Q 007455 200 ---------------LDLCGRQVHKPCR 212 (603)
Q Consensus 200 ---------------~~l~~~~~~~~c~ 212 (603)
+++.+|||.|+|.
T Consensus 269 ~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 269 LLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred ccChhHhccccCCCEEEcCCCCccCCCC
Confidence 3566777777774
No 301
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=2.9e-16 Score=144.76 Aligned_cols=132 Identities=25% Similarity=0.238 Sum_probs=112.4
Q ss_pred EEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccC
Q 007455 72 VRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSS 151 (603)
Q Consensus 72 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 151 (603)
.+.+++++|+++.+ |..+ .++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 46899999999884 4444 37999999999999976667789999999999999999977777789999999999999
Q ss_pred CccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccCCCCCCCCCC
Q 007455 152 NSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLCGRQVHKPCR 212 (603)
Q Consensus 152 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~~~~~~~~c~ 212 (603)
|+|++..+..+.++++|+.|++++|+|++.++. +..+++|+.|++.+| ++.|.|+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N------~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN------PWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS------CBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCC------CeeccCc
Confidence 999977777789999999999999999988886 567888888777665 5666553
No 302
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.66 E-value=4.7e-17 Score=169.93 Aligned_cols=130 Identities=17% Similarity=0.207 Sum_probs=114.0
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|++++|.++.+.+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 56889999999998876666888999999999999999777778999999999999999999888888999999999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
++|+++...+..|.++++|+.|++++|++++.++. +..+++|+.|++++|
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 175 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 175 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSS
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCC
Confidence 99999944444568999999999999999988775 888889999988887
No 303
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.66 E-value=8.8e-17 Score=155.90 Aligned_cols=142 Identities=18% Similarity=0.278 Sum_probs=122.5
Q ss_pred CCccc-cce--eecC------CCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCC-CCCCCCCCccccCCCceEEe
Q 007455 56 SPCKW-TGI--SCHT------HDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNS-LHGSIPNEITNCTELRALYL 125 (603)
Q Consensus 56 ~~c~w-~gv--~C~~------~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L 125 (603)
|.|.+ .++ .|.+ ...+++.|+|++|+++++.+..|.++++|++|+|++|+ +++..+..|.++++|++|+|
T Consensus 8 C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l 87 (239)
T 2xwt_C 8 CECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEI 87 (239)
T ss_dssp CSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEE
T ss_pred CeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEEC
Confidence 44644 554 4964 23579999999999999888899999999999999997 88555668999999999999
Q ss_pred cc-ccCCCCCccccccccccceecccCCccCCCCCCCCccccccc---eeeccCC-cCcccCCC-CccccccC-cccccC
Q 007455 126 RA-NYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLH---YLNLSTN-FFSGEIPD-FGALSAFG-NKSFIG 198 (603)
Q Consensus 126 ~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~---~l~l~~N-~l~~~~~~-~~~l~~l~-~l~~~~ 198 (603)
++ |+|++..+..|.++++|+.|+|++|++++ +|. +..+++|+ .|++++| ++++.++. |..+++|+ .+++++
T Consensus 88 ~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~ 165 (239)
T 2xwt_C 88 RNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYN 165 (239)
T ss_dssp EEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCS
T ss_pred CCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCC
Confidence 99 99997777889999999999999999995 776 88888888 9999999 99988875 88888898 888887
Q ss_pred C
Q 007455 199 N 199 (603)
Q Consensus 199 n 199 (603)
|
T Consensus 166 n 166 (239)
T 2xwt_C 166 N 166 (239)
T ss_dssp C
T ss_pred C
Confidence 7
No 304
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.66 E-value=4.8e-17 Score=167.97 Aligned_cols=139 Identities=22% Similarity=0.143 Sum_probs=121.4
Q ss_pred CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 69 DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
..+|+.|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 46899999999999998888999999999999999999977777899999999999999999988899999999999999
Q ss_pred ccCCccCCCCCCCC---ccccccceeeccCCcCcccCCC-Cccccc--cCcccccCCcccCCCCC
Q 007455 149 LSSNSLKGAIPSSL---GRLTHLHYLNLSTNFFSGEIPD-FGALSA--FGNKSFIGNLDLCGRQV 207 (603)
Q Consensus 149 l~~N~l~~~~p~~~---~~l~~L~~l~l~~N~l~~~~~~-~~~l~~--l~~l~~~~n~~l~~~~~ 207 (603)
|++|+|++..+..| ..+++|+.|+|++|+|++.++. +..++. ++.|++.+|+..|++.+
T Consensus 143 L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 143 LSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp CCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred CCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 99999995433334 5799999999999999987753 556665 47899999999998763
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.65 E-value=1.2e-16 Score=160.97 Aligned_cols=131 Identities=21% Similarity=0.243 Sum_probs=96.8
Q ss_pred CCcEEEEEcCCCCcccccC-CCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCC-CCccccccccccce
Q 007455 69 DQRVRSINLPYMQLGGIIS-PSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQG-GIPANIGNLLFLTI 146 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~ 146 (603)
..++++|+|++|++++..+ ..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++ .+|..+..+++|+.
T Consensus 100 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 179 (306)
T 2z66_A 100 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 179 (306)
T ss_dssp CTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred CCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCE
Confidence 3567778888887777554 567777778888888877777777777777777888887777775 46777777777777
Q ss_pred ecccCCccCCCCCCCCccccccceeeccCCcCcccCC-CCccccccCcccccCC
Q 007455 147 LDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIP-DFGALSAFGNKSFIGN 199 (603)
Q Consensus 147 L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~~l~~l~~~~n 199 (603)
|+|++|++++..|..+..+++|+.|++++|++++.++ .+..+++|+.|++++|
T Consensus 180 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 233 (306)
T 2z66_A 180 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 233 (306)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTS
T ss_pred EECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCC
Confidence 7777777776667777777777777777777777665 3666677777776666
No 306
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.65 E-value=8.3e-17 Score=180.83 Aligned_cols=169 Identities=25% Similarity=0.284 Sum_probs=112.6
Q ss_pred hhhHHHHHHHHHhCCCCCC-CCCCCCCCCCCCccccceeecCCCCcE------------------EEEEcCCCCccc---
Q 007455 27 TEDGMTLLEIKSSLNDSRN-LLGNWQATEESPCKWTGISCHTHDQRV------------------RSINLPYMQLGG--- 84 (603)
Q Consensus 27 ~~~~~~l~~~k~~~~~~~~-~l~~w~~~~~~~c~w~gv~C~~~~~~l------------------~~L~L~~n~l~~--- 84 (603)
+.++.+|+++......+.. .-.+|.......+.|.++.++. +++ ..++|+.|.|.+
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 4588999999887743222 2345654444456788877643 233 334444554443
Q ss_pred ------ccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCCccCCCC
Q 007455 85 ------IISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAI 158 (603)
Q Consensus 85 ------~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 158 (603)
..+..+..+++|+.|+|++|.|. .+|..+.++++|++|+|++|+|+ .+|..|.+|++|+.|+|++|+|+ .+
T Consensus 209 ~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 209 IENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 23667888999999999999998 88888889999999999999999 89999999999999999999999 88
Q ss_pred CCCCccccccceeeccCCcCcccCCCCccccccCcccccCCc
Q 007455 159 PSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNL 200 (603)
Q Consensus 159 p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~ 200 (603)
|..|++|++|+.|+|++|.|+.+|..|+.+++|+.|++++|.
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSC
T ss_pred ChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCc
Confidence 999999999999999999999888789999999999999883
No 307
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.65 E-value=1.2e-16 Score=176.51 Aligned_cols=130 Identities=17% Similarity=0.207 Sum_probs=105.6
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|++++|.++.+.+..|.++++|++|+|++|.|++..|..|..+++|++|+|++|.|++..|..|+++++|+.|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 35678888888888866666788888888888888888777778888888888888888888777777888888888888
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
++|.|++..+..|.++++|+.|+|++|.|++.+|. |..+++|+.|++++|
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 181 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 181 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTS
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCC
Confidence 88888855555568888888888888888888774 777888888888777
No 308
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.64 E-value=1.1e-15 Score=144.82 Aligned_cols=124 Identities=26% Similarity=0.264 Sum_probs=109.4
Q ss_pred EEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCC
Q 007455 73 RSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSN 152 (603)
Q Consensus 73 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 152 (603)
+.++.++++++.+ |..+ .++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 5788999999874 4444 469999999999999766677899999999999999999766677899999999999999
Q ss_pred ccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 153 SLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 153 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
++++..+..|.++++|+.|++++|+|++.++. +..+++|+.|++++|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 134 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQN 134 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCC
Confidence 99977667789999999999999999998886 788999999999887
No 309
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.64 E-value=1.7e-16 Score=173.89 Aligned_cols=130 Identities=22% Similarity=0.218 Sum_probs=85.0
Q ss_pred CCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCC--CCCCccccCCCceEEeccccCCCCCcc-cccccccc
Q 007455 68 HDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGS--IPNEITNCTELRALYLRANYLQGGIPA-NIGNLLFL 144 (603)
Q Consensus 68 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L 144 (603)
...++++|+|++|++++.+|..+.++++|++|+|++|+|++. +|..|.++++|++|+|++|++++.+|. .+..+++|
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 345788888888888887777888888888888888888742 235577788888888888888764554 35566666
Q ss_pred ceecccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 145 TILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 145 ~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
+.|+|++|++++.+|..+. ++|+.|++++|+|+.+++.+..+++|+.|++++|
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N 483 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASN 483 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSS
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCC
Confidence 6666666666555544433 4555555555555555444445555555555544
No 310
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.64 E-value=1e-16 Score=174.05 Aligned_cols=130 Identities=21% Similarity=0.191 Sum_probs=93.7
Q ss_pred CCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCC--CCCCCccccCCCceEEeccccCCCCCccc-ccccccc
Q 007455 68 HDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHG--SIPNEITNCTELRALYLRANYLQGGIPAN-IGNLLFL 144 (603)
Q Consensus 68 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L 144 (603)
...++++|+|++|++++.+|..+..+++|++|+|++|+|++ .+|..+..+++|++|+|++|++++.+|.. +..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 34578888888888888888888888888888888888875 45566788888888888888888656654 6667777
Q ss_pred ceecccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 145 TILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 145 ~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
+.|+|++|++++.+|..+. ++|+.|++++|+|+.+++.+..+++|+.|++++|
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N 454 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASN 454 (520)
T ss_dssp CEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSS
T ss_pred CEEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCC
Confidence 7777777777666555443 5666666666666655555556666666666555
No 311
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.64 E-value=2.8e-16 Score=173.82 Aligned_cols=140 Identities=18% Similarity=0.111 Sum_probs=126.9
Q ss_pred ccceeecCC---------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccC
Q 007455 60 WTGISCHTH---------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYL 130 (603)
Q Consensus 60 w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 130 (603)
+..|.|.+. ...++.|+|++|.|+++.|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 455788542 35799999999999999999999999999999999999988899999999999999999999
Q ss_pred CCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccC-CCCccccccCcccccCC
Q 007455 131 QGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEI-PDFGALSAFGNKSFIGN 199 (603)
Q Consensus 131 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~-~~~~~l~~l~~l~~~~n 199 (603)
++..|..|.++++|++|+|++|++++..|..+.++++|++|++++|++++.. |.+..+++|+.|++++|
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 163 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNN 163 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSS
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccC
Confidence 9888999999999999999999999776888999999999999999999853 66666899999998887
No 312
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.63 E-value=1.6e-16 Score=175.78 Aligned_cols=129 Identities=19% Similarity=0.185 Sum_probs=62.6
Q ss_pred cEEEEEcCCCCcccccC-CCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCC-CCccccccccccceec
Q 007455 71 RVRSINLPYMQLGGIIS-PSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQG-GIPANIGNLLFLTILD 148 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~ 148 (603)
+++.|+|++|++++..+ ..+..+++|++|+|++|.+++..|..+.++++|++|+|++|++++ .+|..|..+++|+.|+
T Consensus 400 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 479 (606)
T 3vq2_A 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLD 479 (606)
T ss_dssp TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEE
Confidence 45555555555555444 344455555555555555554444445555555555555555543 2444444555555555
Q ss_pred ccCCccCCCCCCCCccccccceeeccCCcCcccCC-CCccccccCcccccCC
Q 007455 149 LSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIP-DFGALSAFGNKSFIGN 199 (603)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~~l~~l~~~~n 199 (603)
|++|++++..|..+.++++|+.|++++|++++.+| .+..+++|+.|++++|
T Consensus 480 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 480 LSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred CCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 55555544444444445555555555555544433 2444444444444433
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.63 E-value=5.4e-16 Score=164.65 Aligned_cols=136 Identities=23% Similarity=0.255 Sum_probs=119.4
Q ss_pred CcEEEEEcCCCCcccccC-------------------------CCccCCCCcceEEeccCCCCCCCCCCccccCCCceEE
Q 007455 70 QRVRSINLPYMQLGGIIS-------------------------PSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALY 124 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~-------------------------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 124 (603)
.+++.|+|++|+|+++.+ ..|.++++|++|+|++|+|+ .+|. +..+++|+.|+
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~~l~~L~~L~ 213 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELD 213 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-CTTCSSCCEEE
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-cCCCcccCEEE
Confidence 467777777776665433 34667888888899999998 7775 89999999999
Q ss_pred eccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccC
Q 007455 125 LRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLC 203 (603)
Q Consensus 125 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~ 203 (603)
|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++.+++ |..+++|+.|++.+|++.|
T Consensus 214 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 214 LSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 999999988899999999999999999999988899999999999999999999998876 7889999999999999999
Q ss_pred CCCC
Q 007455 204 GRQV 207 (603)
Q Consensus 204 ~~~~ 207 (603)
++.+
T Consensus 294 dC~l 297 (440)
T 3zyj_A 294 NCDI 297 (440)
T ss_dssp SSTT
T ss_pred CCCc
Confidence 8864
No 314
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.63 E-value=4.6e-16 Score=174.62 Aligned_cols=144 Identities=21% Similarity=0.167 Sum_probs=125.7
Q ss_pred CCccccceeecC---------CCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEec
Q 007455 56 SPCKWTGISCHT---------HDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLR 126 (603)
Q Consensus 56 ~~c~w~gv~C~~---------~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 126 (603)
|.|.++.|.|.. ...++++|+|++|+++++.+..|.++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 81 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECC
T ss_pred ceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECC
Confidence 345566677753 23579999999999999888889999999999999999998889999999999999999
Q ss_pred cccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 127 ANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 127 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
+|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|++++|.+++.++. +..+++|+.|++++|
T Consensus 82 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSS
T ss_pred CCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCC
Confidence 9999965555799999999999999999977778899999999999999999988775 788899999998887
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.63 E-value=2.1e-16 Score=169.76 Aligned_cols=30 Identities=13% Similarity=0.039 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhCCCCeeeecceeeecCC
Q 007455 351 DQVFERELEILGSIKHINLVNLRGYCRLPA 380 (603)
Q Consensus 351 ~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 380 (603)
.+.|..|++.+.+++|+|+|+++|||....
T Consensus 323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 323 SETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 456999999999999999999999997643
No 316
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.62 E-value=7.2e-16 Score=141.06 Aligned_cols=113 Identities=24% Similarity=0.202 Sum_probs=98.3
Q ss_pred EEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCC
Q 007455 73 RSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSN 152 (603)
Q Consensus 73 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 152 (603)
+.|++++|+|+. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 356777888887 565553 89999999999999888999999999999999999999777777899999999999999
Q ss_pred ccCCCCCCCCccccccceeeccCCcCcccCCCCccc
Q 007455 153 SLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGAL 188 (603)
Q Consensus 153 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l 188 (603)
+|++..+..|.++++|+.|+|++|+++...+++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l~~l 124 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYL 124 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGGHHH
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhHHHH
Confidence 999777778999999999999999999887654333
No 317
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.62 E-value=6.1e-16 Score=177.58 Aligned_cols=131 Identities=23% Similarity=0.262 Sum_probs=71.3
Q ss_pred cEEEEEcCCCCcccccCC-CccCCCCcceEEeccCCCC-----CCCCCCccccCCCceEEeccccCCCCCcccccccccc
Q 007455 71 RVRSINLPYMQLGGIISP-SIGRLDKLQRLALHQNSLH-----GSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFL 144 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 144 (603)
+++.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..|.++++|
T Consensus 427 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 506 (844)
T 3j0a_A 427 HLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTAL 506 (844)
T ss_dssp TCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSC
T ss_pred ccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhh
Confidence 455555555555543322 2344555555555555554 2333445556666666666666665555556666666
Q ss_pred ceecccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCCcccCCC
Q 007455 145 TILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNLDLCGR 205 (603)
Q Consensus 145 ~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~~l~~~ 205 (603)
+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|+. +.+|..+++++|++.|++
T Consensus 507 ~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 507 RGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICEC 563 (844)
T ss_dssp SEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSS
T ss_pred heeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccccc
Confidence 6666666666644444443 56666666666666665542 335555555555444433
No 318
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.62 E-value=9.3e-16 Score=163.40 Aligned_cols=135 Identities=21% Similarity=0.216 Sum_probs=85.4
Q ss_pred CcEEEEEcCCCCcccccCCCccCC-------------------------CCcceEEeccCCCCCCCCCCccccCCCceEE
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRL-------------------------DKLQRLALHQNSLHGSIPNEITNCTELRALY 124 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l-------------------------~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 124 (603)
.++++|+|++|+|+++.+..|.++ ++|++|+|++|+|+ .+|. +..+++|+.|+
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~~l~~L~~L~ 224 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMPN-LTPLVGLEELE 224 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCCC-CTTCTTCCEEE
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-cccc-ccccccccEEE
Confidence 578899999988887665555544 45555555555555 3332 55556666666
Q ss_pred eccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccC
Q 007455 125 LRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLC 203 (603)
Q Consensus 125 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~ 203 (603)
|++|+|++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++.+++ +..+++|+.|++ .
T Consensus 225 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L------~ 298 (452)
T 3zyi_A 225 MSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHL------H 298 (452)
T ss_dssp CTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEEC------C
T ss_pred CcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEc------c
Confidence 666666655566666666666666666666666666666666777777777777666554 445555555544 4
Q ss_pred CCCCCCCCC
Q 007455 204 GRQVHKPCR 212 (603)
Q Consensus 204 ~~~~~~~c~ 212 (603)
+|||.|+|.
T Consensus 299 ~Np~~CdC~ 307 (452)
T 3zyi_A 299 HNPWNCDCD 307 (452)
T ss_dssp SSCEECSTT
T ss_pred CCCcCCCCC
Confidence 556677774
No 319
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.62 E-value=5.3e-16 Score=178.15 Aligned_cols=140 Identities=24% Similarity=0.256 Sum_probs=125.7
Q ss_pred ccccceeecCCCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCC-CCCccccCCCceEEeccccCCCCCcc
Q 007455 58 CKWTGISCHTHDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSI-PNEITNCTELRALYLRANYLQGGIPA 136 (603)
Q Consensus 58 c~w~gv~C~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~ 136 (603)
|.|..|.+ ...+++.|+|++|.|+++.+..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|+|++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 46777776 4578999999999999999999999999999999999766666 78899999999999999999988899
Q ss_pred ccccccccceecccCCccCCCCCCC--CccccccceeeccCCcCcccCC--CCccccccCcccccCC
Q 007455 137 NIGNLLFLTILDLSSNSLKGAIPSS--LGRLTHLHYLNLSTNFFSGEIP--DFGALSAFGNKSFIGN 199 (603)
Q Consensus 137 ~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~l~l~~N~l~~~~~--~~~~l~~l~~l~~~~n 199 (603)
.|.++++|++|+|++|.+++.+|.. |.++++|+.|+|++|.+++.++ .|+.+++|+.|++++|
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N 158 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSN 158 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESS
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCC
Confidence 9999999999999999999877665 9999999999999999998765 4888999999998887
No 320
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.62 E-value=4.4e-16 Score=172.97 Aligned_cols=137 Identities=18% Similarity=0.205 Sum_probs=120.0
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCC-CCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLH-GSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
.+++.++++.|.+.+..+..+..+++|+.|+|++|++. +..|..|..+++|++|+|++|+|++..|..|.++++|++|+
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 57889999999999999999999999999999999854 45788899999999999999999988899999999999999
Q ss_pred ccCCccCCCCCCCCccccccceeeccCCcCcccCCC-Cccc-cccCcccccCCcccCCCCCCCCCC
Q 007455 149 LSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGAL-SAFGNKSFIGNLDLCGRQVHKPCR 212 (603)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l-~~l~~l~~~~n~~l~~~~~~~~c~ 212 (603)
|++|+|++..|..|.++++|+.|+|++|+|++.+|+ +..+ ++|+.|+++ +|||.|+|.
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~------~Np~~C~C~ 584 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLT------QNDFACTCE 584 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECT------TCCBCCSGG
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEee------CCCCcccCC
Confidence 999999988888899999999999999999999885 5555 456665554 557777774
No 321
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.61 E-value=6.4e-16 Score=170.97 Aligned_cols=130 Identities=22% Similarity=0.202 Sum_probs=83.3
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCC-ccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNE-ITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
.+++.|+|++|++++..|..|..+++|+.|+|++|++++..|.. +..+++|+.|+|++|++++..|..+..+++|++|+
T Consensus 376 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 455 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455 (606)
T ss_dssp TTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEE
Confidence 46777777777777766767777777777777777776555433 66667777777777776666666666666666666
Q ss_pred ccCCccCCC---CCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 149 LSSNSLKGA---IPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 149 l~~N~l~~~---~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
|++|++++. .+..+..+++|+.|++++|++++.+|. |..+++|+.|++++|
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 510 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN 510 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCC
Confidence 666666541 224456666666666666666665443 555556666655555
No 322
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.61 E-value=1.3e-15 Score=155.41 Aligned_cols=140 Identities=17% Similarity=0.277 Sum_probs=120.9
Q ss_pred CCccccceeecCC---------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEec
Q 007455 56 SPCKWTGISCHTH---------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLR 126 (603)
Q Consensus 56 ~~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 126 (603)
|.|.|+.+.|.+. ..+++.|+|++|+++++.+..|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 31 c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 31 CHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred CcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3478999999642 2479999999999999888899999999999999999998789999999999999999
Q ss_pred cccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcc--cCC-CCccccccCcccccCC
Q 007455 127 ANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSG--EIP-DFGALSAFGNKSFIGN 199 (603)
Q Consensus 127 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~--~~~-~~~~l~~l~~l~~~~n 199 (603)
+|+++ .+|..+. ++|++|++++|++++..+..|.++++|+.|++++|.++. ..+ .+..+ +|+.|++++|
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n 182 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEA 182 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCC
Confidence 99999 7777665 899999999999996666679999999999999999974 444 35555 7888888777
No 323
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.61 E-value=9.6e-16 Score=140.75 Aligned_cols=114 Identities=26% Similarity=0.305 Sum_probs=99.4
Q ss_pred EEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCC
Q 007455 73 RSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSN 152 (603)
Q Consensus 73 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 152 (603)
+.+++++|+|+. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 578999999976 666664 89999999999999888999999999999999999999766666899999999999999
Q ss_pred ccCCCCCCCCccccccceeeccCCcCcccCCCCcccc
Q 007455 153 SLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALS 189 (603)
Q Consensus 153 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~ 189 (603)
+|++..+..|..+++|+.|+|++|++...++++..+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~~~l~ 128 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDIMYLR 128 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGGHHHH
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccccHHHHH
Confidence 9996666669999999999999999998776554443
No 324
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=4.3e-16 Score=143.50 Aligned_cols=126 Identities=19% Similarity=0.153 Sum_probs=108.9
Q ss_pred CcEEEEEcCCCCcccccCCCccCCC-CcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLD-KLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
.+++.|+|++|+++.+ + .+..+. +|++|+|++|.|++. ..|..+++|++|+|++|+|++..|..+..+++|+.|+
T Consensus 19 ~~L~~L~l~~n~l~~i-~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPVI-E-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCSC-C-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCchh-H-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 4799999999999975 4 466665 999999999999954 5799999999999999999965455569999999999
Q ss_pred ccCCccCCCCCC--CCccccccceeeccCCcCcccCCC----CccccccCcccccCCc
Q 007455 149 LSSNSLKGAIPS--SLGRLTHLHYLNLSTNFFSGEIPD----FGALSAFGNKSFIGNL 200 (603)
Q Consensus 149 l~~N~l~~~~p~--~~~~l~~L~~l~l~~N~l~~~~~~----~~~l~~l~~l~~~~n~ 200 (603)
|++|+|+ .+|. .+..+++|+.|++++|+++..++. +..+++|+.|++++|.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECC
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCC
Confidence 9999997 6776 789999999999999999977664 7888999999888873
No 325
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.61 E-value=1.8e-15 Score=169.85 Aligned_cols=142 Identities=20% Similarity=0.206 Sum_probs=101.4
Q ss_pred EEEEEcCCCCcc--cccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCC--------ccccccc
Q 007455 72 VRSINLPYMQLG--GIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGI--------PANIGNL 141 (603)
Q Consensus 72 l~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--------p~~~~~l 141 (603)
++.|+|++|.++ +.+|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|++++.. +..|.++
T Consensus 456 L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l 535 (680)
T 1ziw_A 456 LQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGL 535 (680)
T ss_dssp CCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTC
T ss_pred cccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCC
Confidence 444444444443 345666777777888888888887666666777888888888888777431 1236777
Q ss_pred cccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC-------------------cc
Q 007455 142 LFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN-------------------LD 201 (603)
Q Consensus 142 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n-------------------~~ 201 (603)
++|+.|+|++|+++...+..|.++++|+.|+|++|+|+++++. |..+++|+.|++++| ++
T Consensus 536 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~ 615 (680)
T 1ziw_A 536 SHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELD 615 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEE
T ss_pred CCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEE
Confidence 8888888888888843344678888888888888888887776 567788888877776 35
Q ss_pred cCCCCCCCCCCC
Q 007455 202 LCGRQVHKPCRT 213 (603)
Q Consensus 202 l~~~~~~~~c~~ 213 (603)
+.+|||.|+|+.
T Consensus 616 l~~N~~~c~c~~ 627 (680)
T 1ziw_A 616 MRFNPFDCTCES 627 (680)
T ss_dssp CTTCCCCBCCCC
T ss_pred ccCCCcccCCcc
Confidence 788999999964
No 326
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.60 E-value=1e-15 Score=156.00 Aligned_cols=141 Identities=18% Similarity=0.278 Sum_probs=123.2
Q ss_pred CCccccceeecCC---------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEec
Q 007455 56 SPCKWTGISCHTH---------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLR 126 (603)
Q Consensus 56 ~~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 126 (603)
|.|.|+.+.|.+. ...++.|+|++|+++++.+..|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4478999999642 2578999999999999888899999999999999999998779999999999999999
Q ss_pred cccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcc--cCC-CCccccccCcccccCC
Q 007455 127 ANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSG--EIP-DFGALSAFGNKSFIGN 199 (603)
Q Consensus 127 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~--~~~-~~~~l~~l~~l~~~~n 199 (603)
+|+|+ .+|..+. ++|+.|++++|++++..+..+.++++|+.|++++|+++. ..+ .+..+++|+.|++++|
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n 181 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADT 181 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCC
Confidence 99999 7777665 799999999999997777778999999999999999974 333 4778888888888877
No 327
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.60 E-value=6.3e-16 Score=145.17 Aligned_cols=124 Identities=17% Similarity=0.221 Sum_probs=69.0
Q ss_pred cEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceeccc
Q 007455 71 RVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLS 150 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 150 (603)
++++|+|++|.++.. +.+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++|+.|+|+
T Consensus 67 ~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~ 144 (197)
T 4ezg_A 67 NIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLS 144 (197)
T ss_dssp TCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECC
T ss_pred CCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEcc
Confidence 455556655544332 245555566666666666654455555556666666666666655555555556666666666
Q ss_pred CCc-cCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 151 SNS-LKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 151 ~N~-l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
+|. ++ .+| .+..+++|+.|++++|++++.+ .+..+++|+.|++.+|
T Consensus 145 ~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 145 YNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp SCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC
T ss_pred CCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCc
Confidence 665 33 443 4555556666666666655533 4555555555555554
No 328
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.59 E-value=5.8e-16 Score=172.03 Aligned_cols=130 Identities=18% Similarity=0.278 Sum_probs=121.2
Q ss_pred CCcEEEEEcCCCCcccc-----------------cCCCcc--CCCCcceEEeccCCCCCCCCCCccccCCCceEEecccc
Q 007455 69 DQRVRSINLPYMQLGGI-----------------ISPSIG--RLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANY 129 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 129 (603)
..++++|+|++|.+++. +|+.++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 46899999999999996 899999 99999999999999999999999999999999999998
Q ss_pred -CCC-CCccccccc------cccceecccCCccCCCCCC--CCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 130 -LQG-GIPANIGNL------LFLTILDLSSNSLKGAIPS--SLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 130 -l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++| .+|..++.+ ++|+.|+|++|+++ .+|. .+.++++|+.|++++|+++|.+|.+..+++|+.|++++|
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYN 363 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCC
Confidence 998 899999887 99999999999999 8998 899999999999999999977778888999999988887
No 329
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.58 E-value=1.9e-15 Score=164.74 Aligned_cols=120 Identities=24% Similarity=0.242 Sum_probs=107.7
Q ss_pred cEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceeccc
Q 007455 71 RVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLS 150 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 150 (603)
.++.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|++|++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 48899999999998 565 999999999999999999 899999999999999999999995 77 89999999999999
Q ss_pred CCccCCCC-CCCCccccccceeeccCCcCcccCCCCcc----ccccCccc
Q 007455 151 SNSLKGAI-PSSLGRLTHLHYLNLSTNFFSGEIPDFGA----LSAFGNKS 195 (603)
Q Consensus 151 ~N~l~~~~-p~~~~~l~~L~~l~l~~N~l~~~~~~~~~----l~~l~~l~ 195 (603)
+|+|++.. |..+.++++|+.|+|++|+|++.++.+.. +++|+.|+
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 99999776 99999999999999999999999886433 45565553
No 330
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.58 E-value=3.1e-15 Score=164.08 Aligned_cols=130 Identities=20% Similarity=0.196 Sum_probs=116.9
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|+++++.+.+|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 57999999999999988889999999999999999999777788999999999999999999777889999999999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCccc--CCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGE--IPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~--~~~~~~l~~l~~l~~~~n 199 (603)
++|++++..+..++++++|++|++++|.+++. |..+..+++|+.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n 159 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTS
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCC
Confidence 99999966555799999999999999999973 445888999999998887
No 331
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.58 E-value=1.1e-15 Score=143.53 Aligned_cols=125 Identities=17% Similarity=0.246 Sum_probs=112.4
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|+++. +| .+..+++|++|+|++|.++ .+ ..+..+++|++|+|++|++++..|..+..+++|+.|+|
T Consensus 44 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 469999999999986 45 6999999999999999886 44 46999999999999999999888999999999999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCc-CcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNF-FSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~-l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|++++..|..+.++++|+.|++++|+ ++.. +.+..+++|+.|++++|
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFD 169 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-GGGGGCSSCCEEECTTB
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-HhhcCCCCCCEEECCCC
Confidence 9999998788889999999999999998 6655 47888999999998887
No 332
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.58 E-value=1.9e-15 Score=165.76 Aligned_cols=129 Identities=19% Similarity=0.274 Sum_probs=59.8
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCC-CCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIP-NEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
.+++.|+|++|.+++..+. +..+++|++|+|++|.+++..| ..+.++++|++|+|++|++++..|..+.++++|+.|+
T Consensus 373 ~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 373 TSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp SCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred CccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 3455566666555553332 4445555555555555443333 2344444444444444444444444444444444444
Q ss_pred ccCCccC-CCCCCCCccccccceeeccCCcCcccCC-CCccccccCcccccCC
Q 007455 149 LSSNSLK-GAIPSSLGRLTHLHYLNLSTNFFSGEIP-DFGALSAFGNKSFIGN 199 (603)
Q Consensus 149 l~~N~l~-~~~p~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~~l~~l~~~~n 199 (603)
|++|+++ +.+|..+..+++|+.|++++|++++.+| .+..+++|+.|++++|
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 4444443 2344444444444444444444444432 2344444444444443
No 333
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.57 E-value=2.6e-15 Score=151.61 Aligned_cols=128 Identities=18% Similarity=0.157 Sum_probs=100.0
Q ss_pred CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCC--C--CCCccccCCCceEEeccccCCCCCcc----cccc
Q 007455 69 DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGS--I--PNEITNCTELRALYLRANYLQGGIPA----NIGN 140 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~ 140 (603)
..++++|+|++|++++..+..|..+++|++|+|++|++.+. + +..+..+++|++|+|++|+|+ .+|. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 35788888888888888888888888888888888887642 2 233467888888888888887 4444 2567
Q ss_pred ccccceecccCCccCCCCCCCCccc---cccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 141 LLFLTILDLSSNSLKGAIPSSLGRL---THLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 141 l~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
+++|++|+|++|+|++..|..+..+ ++|+.|+|++|+|+.+|..+. ++|+.|++++|
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N 282 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSN 282 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSC
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCC
Confidence 7889999999999987778777776 689999999999987666553 67888888777
No 334
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.57 E-value=1.2e-15 Score=154.28 Aligned_cols=129 Identities=16% Similarity=0.120 Sum_probs=76.3
Q ss_pred CcEEEEEcCCCCcccccCCCccCC-----CCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCC--Ccccc--cc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRL-----DKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGG--IPANI--GN 140 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~--~~ 140 (603)
.++++|+|++|++++. |..++.+ ++|++|+|++|+|++..|..|.++++|++|+|++|++.+. +|..+ ..
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 4567777777777665 5555555 6677777777777655556666677777777777766543 23333 55
Q ss_pred ccccceecccCCccCC--CCC-CCCccccccceeeccCCcCcccCC--CCccccccCcccccCC
Q 007455 141 LLFLTILDLSSNSLKG--AIP-SSLGRLTHLHYLNLSTNFFSGEIP--DFGALSAFGNKSFIGN 199 (603)
Q Consensus 141 l~~L~~L~l~~N~l~~--~~p-~~~~~l~~L~~l~l~~N~l~~~~~--~~~~l~~l~~l~~~~n 199 (603)
+++|++|+|++|+|++ .++ ..+.++++|+.|++++|+|++.+| .+..+++|+.|++++|
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N 263 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFT 263 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTS
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCC
Confidence 6666666666666652 111 122345566666666666665542 2444555666655555
No 335
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.56 E-value=2.2e-15 Score=152.66 Aligned_cols=125 Identities=15% Similarity=0.094 Sum_probs=78.7
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccc-cccccceec
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIG-NLLFLTILD 148 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ 148 (603)
.+++.|+|++|++++..+.. +++|++|+|++|++++..|..+..+++|++|+|++|++++..|..+. .+++|+.|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 45666666666666654432 45667777777777655555666667777777777777655555553 566677777
Q ss_pred ccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 149 LSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
|++|+|++. |. ...+++|+.|+|++|+|++.++.+..+++|+.|++++|
T Consensus 176 L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N 224 (317)
T 3o53_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNN 224 (317)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTS
T ss_pred CCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCC
Confidence 777776633 32 23466667777777777666666666666666666665
No 336
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.56 E-value=2.4e-15 Score=161.41 Aligned_cols=132 Identities=16% Similarity=0.102 Sum_probs=120.0
Q ss_pred CCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCcccccccccccee
Q 007455 68 HDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTIL 147 (603)
Q Consensus 68 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (603)
...++++|+|++|.++++.|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|+.|
T Consensus 54 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 133 (477)
T 2id5_A 54 SFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSL 133 (477)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEE
Confidence 34689999999999999999999999999999999999996555678999999999999999998889999999999999
Q ss_pred cccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 148 DLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
+|++|++++..|..|.++++|+.|++++|++++.++. +..+++|+.|++.+|
T Consensus 134 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 186 (477)
T 2id5_A 134 EVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL 186 (477)
T ss_dssp EECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESC
T ss_pred ECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCC
Confidence 9999999988888999999999999999999987764 777888888888877
No 337
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.56 E-value=9.7e-16 Score=164.50 Aligned_cols=123 Identities=16% Similarity=0.109 Sum_probs=76.5
Q ss_pred EEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccc-cccccceeccc
Q 007455 72 VRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIG-NLLFLTILDLS 150 (603)
Q Consensus 72 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~ 150 (603)
++.|+|++|.|++..+. .+++|+.|+|++|.|++..|..|+++++|+.|+|++|+|++..|..+. .+++|+.|+|+
T Consensus 101 L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls 177 (487)
T 3oja_A 101 IETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177 (487)
T ss_dssp CCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECT
T ss_pred cCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecC
Confidence 33444444444443332 245666777777777666666666677777777777777766666665 56777777777
Q ss_pred CCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 151 SNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
+|.|++. |. +..+++|+.|+|++|+|++.++.+..+++|+.|++++|
T Consensus 178 ~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N 224 (487)
T 3oja_A 178 YNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNN 224 (487)
T ss_dssp TSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTS
T ss_pred CCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCC
Confidence 7777644 22 33466777777777777776666666666666666665
No 338
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=8.1e-15 Score=134.01 Aligned_cols=109 Identities=27% Similarity=0.315 Sum_probs=95.6
Q ss_pred CcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeecc
Q 007455 95 KLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLS 174 (603)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 174 (603)
..+.|++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999998 7887764 899999999999998889999999999999999999997777778999999999999
Q ss_pred CCcCcccCCC-CccccccCcccccCCcccCCCCCCCCCC
Q 007455 175 TNFFSGEIPD-FGALSAFGNKSFIGNLDLCGRQVHKPCR 212 (603)
Q Consensus 175 ~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~~~~~~~~c~ 212 (603)
+|+|++.+++ |..+++|+.|++++| ||.|.|.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N------~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNN------PWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSS------CBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCC------CCCCCch
Confidence 9999999886 778888887766665 6667664
No 339
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.56 E-value=8.5e-15 Score=152.79 Aligned_cols=128 Identities=23% Similarity=0.201 Sum_probs=115.7
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.++++|+|++|+++++.+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|+...+..|.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 57899999999999988889999999999999999999888888999999999999999999544445799999999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|++++..|..+.++++|+.|++++|++++.+ +..+++|+.+++++|
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYN 196 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSS
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccc
Confidence 999999888888999999999999999999763 567788888888776
No 340
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.56 E-value=7.2e-15 Score=162.12 Aligned_cols=128 Identities=23% Similarity=0.201 Sum_probs=116.8
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+|+.|+|++|.|+++.+..|+.+++|++|+|++|.|++..|..|+++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 57899999999999998889999999999999999999888888999999999999999999665666799999999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|.+++..|..|.++++|+.|++++|.|++.+ ++.+++|..|++++|
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYN 202 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSS
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccC
Confidence 999999888889999999999999999999874 466778888877776
No 341
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.56 E-value=4.3e-15 Score=162.81 Aligned_cols=135 Identities=21% Similarity=0.284 Sum_probs=116.9
Q ss_pred CCcEEEEEcCCCCcccc--cCCCccCCCCcceEEeccCCCCCCCCC-CccccCCCceEEeccccCCCCCccccccccccc
Q 007455 69 DQRVRSINLPYMQLGGI--ISPSIGRLDKLQRLALHQNSLHGSIPN-EITNCTELRALYLRANYLQGGIPANIGNLLFLT 145 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 145 (603)
..+++.|+|++|+++++ +|..+.++++|++|+|++|++++.+|. .+..+++|+.|+|++|+|++.+|..+. ++|+
T Consensus 376 l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~ 453 (562)
T 3a79_B 376 LKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVK 453 (562)
T ss_dssp CSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCS
T ss_pred cCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCC
Confidence 35899999999999984 356799999999999999999975765 488999999999999999987777664 7999
Q ss_pred eecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccCCCCCCCCCC
Q 007455 146 ILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLCGRQVHKPCR 212 (603)
Q Consensus 146 ~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~~~~~~~~c~ 212 (603)
.|+|++|+|+ .+|..+..+++|+.|+|++|+|+++++. +..+++|+.+++++| ||.|+|+
T Consensus 454 ~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N------~~~c~c~ 514 (562)
T 3a79_B 454 VLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDN------PWDCTCP 514 (562)
T ss_dssp EEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSC------CBCCCHH
T ss_pred EEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCC------CcCCCcc
Confidence 9999999999 8888888999999999999999988877 777888887766655 6667774
No 342
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.55 E-value=3.7e-15 Score=144.37 Aligned_cols=130 Identities=16% Similarity=0.116 Sum_probs=111.7
Q ss_pred CCcEEEEEcCCCC-cccccCCCccCCCCcceEEecc-CCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccc-
Q 007455 69 DQRVRSINLPYMQ-LGGIISPSIGRLDKLQRLALHQ-NSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLT- 145 (603)
Q Consensus 69 ~~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~- 145 (603)
..+++.|+|++|+ ++++.+..|.++++|++|+|++ |+|++..+..|.++++|++|+|++|++++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 4689999999997 8888778899999999999998 99996666789999999999999999995 776 88888888
Q ss_pred --eecccCC-ccCCCCCCCCccccccc-eeeccCCcCcccCCCCccccccCcccccCCc
Q 007455 146 --ILDLSSN-SLKGAIPSSLGRLTHLH-YLNLSTNFFSGEIPDFGALSAFGNKSFIGNL 200 (603)
Q Consensus 146 --~L~l~~N-~l~~~~p~~~~~l~~L~-~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~ 200 (603)
.|++++| ++++..+..|.++++|+ .|++++|+++.+++......+|+.|++++|.
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCC
Confidence 9999999 99966667799999999 9999999999777654344788888888884
No 343
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.55 E-value=2.3e-15 Score=170.93 Aligned_cols=130 Identities=18% Similarity=0.239 Sum_probs=118.9
Q ss_pred CCcEEEEEcCCCCccc-----------------ccCCCcc--CCCCcceEEeccCCCCCCCCCCccccCCCceEEecccc
Q 007455 69 DQRVRSINLPYMQLGG-----------------IISPSIG--RLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANY 129 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 129 (603)
..+++.|+|++|+|++ .+|+.++ ++++|++|+|++|++.+.+|..|.++++|+.|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 4689999999999999 4888888 99999999999999999999999999999999999998
Q ss_pred -CCC-CCcccccccc-------ccceecccCCccCCCCCC--CCccccccceeeccCCcCcccCCCCccccccCcccccC
Q 007455 130 -LQG-GIPANIGNLL-------FLTILDLSSNSLKGAIPS--SLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIG 198 (603)
Q Consensus 130 -l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~ 198 (603)
|+| .+|..+++++ +|+.|+|++|+++ .+|. .+.++++|+.|+|++|+|+. +|.++.+++|+.|++++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~-lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRH-LEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCB-CCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCccc-chhhcCCCcceEEECcC
Confidence 998 8998888877 9999999999999 8998 89999999999999999994 44888899999998888
Q ss_pred Cc
Q 007455 199 NL 200 (603)
Q Consensus 199 n~ 200 (603)
|.
T Consensus 605 N~ 606 (876)
T 4ecn_A 605 NQ 606 (876)
T ss_dssp SC
T ss_pred Cc
Confidence 73
No 344
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.54 E-value=3.1e-15 Score=153.89 Aligned_cols=131 Identities=17% Similarity=0.159 Sum_probs=115.6
Q ss_pred CCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCcc--ccccccccc
Q 007455 68 HDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPA--NIGNLLFLT 145 (603)
Q Consensus 68 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~ 145 (603)
...+++.|+|++|+++++.+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+++ .+|. .+..+++|+
T Consensus 74 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~ 152 (353)
T 2z80_A 74 RCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQ 152 (353)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCC
T ss_pred cCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCc
Confidence 3468999999999999988899999999999999999999544445899999999999999999 4554 789999999
Q ss_pred eecccCC-ccCCCCCCCCccccccceeeccCCcCcccCC-CCccccccCcccccCC
Q 007455 146 ILDLSSN-SLKGAIPSSLGRLTHLHYLNLSTNFFSGEIP-DFGALSAFGNKSFIGN 199 (603)
Q Consensus 146 ~L~l~~N-~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~~l~~l~~~~n 199 (603)
.|++++| .+++..|..+.++++|+.|++++|++++.+| .+..+++|+.|++++|
T Consensus 153 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 208 (353)
T 2z80_A 153 ILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMK 208 (353)
T ss_dssp EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECS
T ss_pred EEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCC
Confidence 9999999 4776667889999999999999999999865 4888888988888876
No 345
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.54 E-value=3.7e-15 Score=161.69 Aligned_cols=135 Identities=24% Similarity=0.281 Sum_probs=117.7
Q ss_pred CCcEEEEEcCCCCccc--ccCCCccCCCCcceEEeccCCCCCCCCCC-ccccCCCceEEeccccCCCCCccccccccccc
Q 007455 69 DQRVRSINLPYMQLGG--IISPSIGRLDKLQRLALHQNSLHGSIPNE-ITNCTELRALYLRANYLQGGIPANIGNLLFLT 145 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 145 (603)
..+++.|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+.|+|++|++++.+|..+. ++|+
T Consensus 347 l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~ 424 (520)
T 2z7x_B 347 LTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIK 424 (520)
T ss_dssp CSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCC
T ss_pred CCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCC
Confidence 4579999999999997 45678999999999999999999767764 88999999999999999988887765 7999
Q ss_pred eecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccCCCCCCCCCC
Q 007455 146 ILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLCGRQVHKPCR 212 (603)
Q Consensus 146 ~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~~~~~~~~c~ 212 (603)
.|+|++|+|+ .+|..+..+++|+.|++++|+|++.++. +..+++|+.+++++| |+.|+|+
T Consensus 425 ~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N------~~~c~c~ 485 (520)
T 2z7x_B 425 VLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTN------PWDCSCP 485 (520)
T ss_dssp EEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS------CBCCCHH
T ss_pred EEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCC------CCcccCC
Confidence 9999999999 8998888999999999999999988776 777778877766655 6666664
No 346
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.54 E-value=8e-16 Score=155.46 Aligned_cols=128 Identities=18% Similarity=0.158 Sum_probs=66.1
Q ss_pred cEEEEEcCCCCcccccCCCc--cCCCCcceEEeccCCCCCCCCCCcccc-----CCCceEEeccccCCCCCccccccccc
Q 007455 71 RVRSINLPYMQLGGIISPSI--GRLDKLQRLALHQNSLHGSIPNEITNC-----TELRALYLRANYLQGGIPANIGNLLF 143 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~ 143 (603)
++++|+|++|++++.+|..+ ..+++|++|+|++|+|++. |..+..+ ++|++|+|++|+|++..|..|.++++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 45555555555555555544 5555555555555555533 5545544 55555555555555544455555555
Q ss_pred cceecccCCccCCC--CCCCC--ccccccceeeccCCcCcccCC---C-CccccccCcccccCC
Q 007455 144 LTILDLSSNSLKGA--IPSSL--GRLTHLHYLNLSTNFFSGEIP---D-FGALSAFGNKSFIGN 199 (603)
Q Consensus 144 L~~L~l~~N~l~~~--~p~~~--~~l~~L~~l~l~~N~l~~~~~---~-~~~l~~l~~l~~~~n 199 (603)
|++|+|++|++.+. +|..+ .++++|+.|++++|+|++.+. . +..+++|+.|++++|
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N 238 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHN 238 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTS
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCC
Confidence 55555555555433 12222 455555555555555553221 1 223345555555554
No 347
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=1.7e-14 Score=132.38 Aligned_cols=107 Identities=24% Similarity=0.326 Sum_probs=94.2
Q ss_pred ceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCC
Q 007455 97 QRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTN 176 (603)
Q Consensus 97 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N 176 (603)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 8888775 89999999999999888999999999999999999999766666899999999999999
Q ss_pred cCcccCCC-CccccccCcccccCCcccCCCCCCCCCC
Q 007455 177 FFSGEIPD-FGALSAFGNKSFIGNLDLCGRQVHKPCR 212 (603)
Q Consensus 177 ~l~~~~~~-~~~l~~l~~l~~~~n~~l~~~~~~~~c~ 212 (603)
+|+++++. |..+++|+.|++.+| +|.|.|.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N------~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNN------PWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSS------CBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCC------Ccccccc
Confidence 99999886 788888888776655 6666664
No 348
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.54 E-value=7.8e-15 Score=150.53 Aligned_cols=112 Identities=22% Similarity=0.213 Sum_probs=96.3
Q ss_pred CccccceeecCCCCcEEEEEcCCCCcccccCCCccCCCCcceEEecc-CCCCCCCCCCccccCCCceEEeccccCCCCCc
Q 007455 57 PCKWTGISCHTHDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQ-NSLHGSIPNEITNCTELRALYLRANYLQGGIP 135 (603)
Q Consensus 57 ~c~w~gv~C~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 135 (603)
.|.|.+|.|.+ +|+|++ +|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|
T Consensus 7 ~C~~~~v~~~~-----------~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 7 PHGSSGLRCTR-----------DGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp CSSSSCEECCS-----------SCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred cccCCEEEcCC-----------CCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 58888777753 226777 666 99999999999996 99997777889999999999999999999889
Q ss_pred cccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccC
Q 007455 136 ANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEI 182 (603)
Q Consensus 136 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 182 (603)
..|.+|++|+.|+|++|+|++..+..|..++ |+.|+|++|+|....
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSC 119 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCG
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCC
Confidence 9999999999999999999966555666665 999999999998654
No 349
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.53 E-value=1.3e-14 Score=147.80 Aligned_cols=124 Identities=19% Similarity=0.220 Sum_probs=54.5
Q ss_pred EEEEEcCCCCcccccCCCccCCCCcceEEeccCCCC--CCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 72 VRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLH--GSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 72 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
+++|+|++|+++++.+..|..+++|+.|+|++|.++ +..|..+..+ +|+.|+|++|+++ .+|..+. ++|+.|+|
T Consensus 125 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l 200 (332)
T 2ft3_A 125 LVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLP--ETLNELHL 200 (332)
T ss_dssp CCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCCSSSC--SSCSCCBC
T ss_pred CCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-ccCcccc--CCCCEEEC
Confidence 444444444444433334555555555555555553 1333333333 2222222222222 1221111 34455555
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
++|++++..|..+.++++|+.|++++|++++.++. +..+++|+.|++++|
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 251 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNN 251 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSS
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCC
Confidence 55555544444555555555555555555554442 444445555544444
No 350
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.53 E-value=2.5e-14 Score=145.62 Aligned_cols=129 Identities=19% Similarity=0.160 Sum_probs=74.8
Q ss_pred cEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCC--CCCCCccccC---------------------CCceEEecc
Q 007455 71 RVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHG--SIPNEITNCT---------------------ELRALYLRA 127 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~---------------------~L~~L~L~~ 127 (603)
+++.|+|++|+++++.+..|.++++|++|+|++|.++. ..+..+.+++ +|+.|+|++
T Consensus 122 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~ 201 (330)
T 1xku_A 122 TLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDG 201 (330)
T ss_dssp TCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTT
T ss_pred cccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCC
Confidence 45666666666655544445555555555555555532 3344444444 455555555
Q ss_pred ccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 128 NYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 128 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|+|+..+..+..+++|+.|++++|
T Consensus 202 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N 273 (330)
T 1xku_A 202 NKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNN 273 (330)
T ss_dssp SCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCC
Confidence 555555555666666666666666666655555666666666666666666655555666666666666655
No 351
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.53 E-value=3.4e-15 Score=151.18 Aligned_cols=127 Identities=20% Similarity=0.177 Sum_probs=83.7
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCc-cccCCCceEEeccccCCCCCccccccccccceec
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEI-TNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
.+++.|+|++|++++..+..+..+++|++|+|++|.|++..|..+ ..+++|++|+|++|+|++. |. ...+++|++|+
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~ 197 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLD 197 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEE
Confidence 456777777777777666667777777777777777775555555 3567777777777777633 32 23467777777
Q ss_pred ccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 149 LSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
|++|+|+ .+|..+..+++|+.|++++|+|++.++.+..+++|+.|++++|
T Consensus 198 Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N 247 (317)
T 3o53_A 198 LSSNKLA-FMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGN 247 (317)
T ss_dssp CCSSCCC-EECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTC
T ss_pred CCCCcCC-cchhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCC
Confidence 7777777 3444566777777777777777766666666666666665555
No 352
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.53 E-value=1.4e-14 Score=144.77 Aligned_cols=121 Identities=26% Similarity=0.355 Sum_probs=97.1
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|++++..+ +..+++|++|+|++|+++ .+|. +..+++|+.|+|++|+|++ + +.+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~-~~~~-l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK-DLSS-LKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CGGG-GTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCC-CChh-hccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 578888888888888554 888888888888888887 4444 8888888888888888884 3 46788888888888
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|++++. ..+..+++|+.|++++|+|++.++ +..+++|+.|++++|
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N 188 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKN 188 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSS
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCC
Confidence 88888844 568888888888888888887766 777788888887777
No 353
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.52 E-value=1.3e-14 Score=158.54 Aligned_cols=133 Identities=20% Similarity=0.250 Sum_probs=75.5
Q ss_pred CcEEEEEcCCCCcccccC--CCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCcccc---------
Q 007455 70 QRVRSINLPYMQLGGIIS--PSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANI--------- 138 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~--------- 138 (603)
++++.|+|++|++++..+ ..+..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|..+
T Consensus 361 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~L 438 (549)
T 2z81_A 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDV 438 (549)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEEC
T ss_pred ccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhcCCceEEEC
Confidence 455566666666555322 33556666666666666666 56666666666666666666665 233221
Q ss_pred ---------ccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCcccCCCCCC
Q 007455 139 ---------GNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLDLCGRQVH 208 (603)
Q Consensus 139 ---------~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~l~~~~~~ 208 (603)
..+++|++|+|++|+|+ .+|. ...+++|+.|+|++|+|++.+|+ +..+++|+.+++++ |||.
T Consensus 439 s~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~------N~~~ 510 (549)
T 2z81_A 439 SNNNLDSFSLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHT------NPWD 510 (549)
T ss_dssp CSSCCSCCCCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCS------SCBC
T ss_pred CCCChhhhcccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecC------CCcc
Confidence 24555666666666665 4554 34566666666666666666554 45555555554444 4555
Q ss_pred CCCC
Q 007455 209 KPCR 212 (603)
Q Consensus 209 ~~c~ 212 (603)
|+|+
T Consensus 511 ~~~~ 514 (549)
T 2z81_A 511 CSCP 514 (549)
T ss_dssp CCHH
T ss_pred CCCc
Confidence 6664
No 354
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.52 E-value=8.3e-15 Score=147.83 Aligned_cols=128 Identities=21% Similarity=0.215 Sum_probs=108.0
Q ss_pred CCCcEEEEEcCCCCcccc---cC-CCccCCCCcceEEeccCCCCCCCCC----CccccCCCceEEeccccCCCCCccccc
Q 007455 68 HDQRVRSINLPYMQLGGI---IS-PSIGRLDKLQRLALHQNSLHGSIPN----EITNCTELRALYLRANYLQGGIPANIG 139 (603)
Q Consensus 68 ~~~~l~~L~L~~n~l~~~---~~-~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~p~~~~ 139 (603)
...++++|+|++|++.+. .+ ..+..+++|++|+|++|+|+ .+|. .+.++++|++|+|++|+|++..|..+.
T Consensus 167 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~ 245 (310)
T 4glp_A 167 AFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAP 245 (310)
T ss_dssp CCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCS
T ss_pred cCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHH
Confidence 346899999999998763 22 33478999999999999997 5554 257889999999999999988898888
Q ss_pred cc---cccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCCc
Q 007455 140 NL---LFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNL 200 (603)
Q Consensus 140 ~l---~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~ 200 (603)
.+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++.+ .+..+++|+.|++++|.
T Consensus 246 ~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~-~~~~l~~L~~L~L~~N~ 305 (310)
T 4glp_A 246 RCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAP-QPDELPEVDNLTLDGNP 305 (310)
T ss_dssp SCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCC-CTTSCCCCSCEECSSTT
T ss_pred hccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCc-hhhhCCCccEEECcCCC
Confidence 87 69999999999999 7888775 89999999999999874 46778888888888774
No 355
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.51 E-value=9.2e-15 Score=133.36 Aligned_cols=113 Identities=21% Similarity=0.207 Sum_probs=100.7
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCC-ccccccccccceec
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGI-PANIGNLLFLTILD 148 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 148 (603)
.+++.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|+.|+|++|+|++.. +..+..+++|+.|+
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~ 126 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLD 126 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEE
Confidence 5799999999999986 78999999999999999999778888888999999999999999532 27899999999999
Q ss_pred ccCCccCCCCC---CCCccccccceeeccCCcCcccCCC
Q 007455 149 LSSNSLKGAIP---SSLGRLTHLHYLNLSTNFFSGEIPD 184 (603)
Q Consensus 149 l~~N~l~~~~p---~~~~~l~~L~~l~l~~N~l~~~~~~ 184 (603)
|++|.+++..+ ..+..+++|+.|++++|.++..+.+
T Consensus 127 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 165 (168)
T 2ell_A 127 LFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPDS 165 (168)
T ss_dssp CCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCSS
T ss_pred eeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcccc
Confidence 99999995444 3789999999999999999877653
No 356
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.51 E-value=2.4e-14 Score=140.73 Aligned_cols=121 Identities=26% Similarity=0.376 Sum_probs=93.6
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|+|+++.+ +..+++|++|+|++|+|+ .+|. +.. ++|+.|+|++|+|++ ++ .+..+++|+.|+|
T Consensus 63 ~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~-~l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLK-NLNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCS-CCTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCChh--hccCCCCCEEECCCCccC-CcCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 568888888888887554 888888888888888887 4554 333 888888888888884 44 5788888888888
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCCc
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNL 200 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~ 200 (603)
++|+|++ +| .+..+++|+.|++++|+|++. +.+..+++|+.|++++|.
T Consensus 136 s~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 136 RNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp TTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEE
T ss_pred CCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCc
Confidence 8888884 44 578888888888888888877 567777888888777774
No 357
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.51 E-value=8.7e-15 Score=158.81 Aligned_cols=132 Identities=21% Similarity=0.310 Sum_probs=100.5
Q ss_pred CCCCCCCCCCCc-----cccce-eecCCCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCC
Q 007455 47 LGNWQATEESPC-----KWTGI-SCHTHDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTEL 120 (603)
Q Consensus 47 l~~w~~~~~~~c-----~w~gv-~C~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 120 (603)
+.+|.. +..|| .|.|+ .|.. .+++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHhc-cCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 456753 34577 79999 7864 479999999999988 666553 78999999999988 777 457888
Q ss_pred ceEEeccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 121 RALYLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 121 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
+.|+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|+++++ .+++|+.|++++|
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N 170 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNN 170 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSS
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCC
Confidence 888888888885 776 655 88888888888885 665 56788888888888887554 4567777777776
No 358
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.50 E-value=3.4e-14 Score=143.17 Aligned_cols=121 Identities=23% Similarity=0.361 Sum_probs=88.9
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|+++++.+ +..+++|++|+|++|+|+ .+| .+..+++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCC-Cch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 467888888888877544 777888888888888877 344 47778888888888888874 443 777788888888
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|++++..+ +..+++|+.|++++|++++.++ +..+++|+.|++++|
T Consensus 137 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n 183 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDN 183 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSS
T ss_pred CCCccCcCcc--ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCC
Confidence 8888774433 7777778888888888776655 667777777777766
No 359
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.50 E-value=3.7e-14 Score=142.91 Aligned_cols=123 Identities=20% Similarity=0.330 Sum_probs=104.7
Q ss_pred CCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCcccccccccccee
Q 007455 68 HDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTIL 147 (603)
Q Consensus 68 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (603)
...+++.|+|++|++++. +.+..+++|++|+|++|+|++ +|. +..+++|+.|+|++|++++ ++. +..+++|+.|
T Consensus 83 ~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L 156 (308)
T 1h6u_A 83 NLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYL 156 (308)
T ss_dssp TCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEE
T ss_pred cCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEE
Confidence 346899999999999885 368899999999999999984 554 8999999999999999995 443 8899999999
Q ss_pred cccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 148 DLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
+|++|++++. +. +..+++|+.|++++|++++.++ +..+++|+.|++++|
T Consensus 157 ~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N 205 (308)
T 1h6u_A 157 SIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNN 205 (308)
T ss_dssp ECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTS
T ss_pred EccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCC
Confidence 9999999954 43 8899999999999999998765 778888888888887
No 360
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.49 E-value=1.9e-14 Score=161.67 Aligned_cols=113 Identities=32% Similarity=0.475 Sum_probs=106.1
Q ss_pred CCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCcccccccccccee
Q 007455 68 HDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTIL 147 (603)
Q Consensus 68 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (603)
....++.|+|++|++.. +|..+..+++|++|+|++|.|+ .+|..|.+|++|++|+|++|+|+ .+|..|.+|++|+.|
T Consensus 222 ~l~~L~~L~Ls~n~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCCEEECTTSCCSC-CCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred cCCCCcEEECCCCCCCC-CChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 44679999999999985 7777889999999999999999 99999999999999999999999 889999999999999
Q ss_pred cccCCccCCCCCCCCccccccceeeccCCcCcccCCC
Q 007455 148 DLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD 184 (603)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 184 (603)
+|++|.|+ .+|..|.+|++|+.|+|++|+|++.+|.
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 99999998 8899999999999999999999998875
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.49 E-value=4.2e-14 Score=141.19 Aligned_cols=124 Identities=25% Similarity=0.336 Sum_probs=109.7
Q ss_pred CCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCcccccccccccee
Q 007455 68 HDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTIL 147 (603)
Q Consensus 68 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 147 (603)
...+++.|+|++|.+++. + .+..+++|++|+|++|+|++ ++ .+..+++|+.|+|++|++++. ..+..+++|+.|
T Consensus 88 ~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~L~~n~i~~-~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 161 (291)
T 1h6t_A 88 NLKNLGWLFLDENKVKDL-S-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 161 (291)
T ss_dssp TCTTCCEEECCSSCCCCG-G-GGTTCTTCCEEECTTSCCCC-CG-GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred cCCCCCEEECCCCcCCCC-h-hhccCCCCCEEECCCCcCCC-Ch-hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEE
Confidence 346899999999999884 3 49999999999999999984 44 599999999999999999954 679999999999
Q ss_pred cccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCCc
Q 007455 148 DLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNL 200 (603)
Q Consensus 148 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~ 200 (603)
+|++|++++..| +..+++|+.|++++|+|++.+ .+..+++|+.|++++|.
T Consensus 162 ~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~-~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 162 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFSQE 211 (291)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEEEEEEE
T ss_pred EccCCccccchh--hcCCCccCEEECCCCcCCCCh-hhccCCCCCEEECcCCc
Confidence 999999996554 999999999999999999864 58888999999998884
No 362
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.47 E-value=6.2e-14 Score=137.76 Aligned_cols=120 Identities=23% Similarity=0.305 Sum_probs=105.0
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|+++.+ + .+..+++|++|+|++|+|++ +|. +.++++|+.|+|++|+|++ +|... . ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEEC
T ss_pred CcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEc
Confidence 5799999999999874 4 79999999999999999994 555 9999999999999999995 55433 3 99999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|+|++ ++ .+.++++|+.|++++|+|++.+ .+..+++|+.|++++|
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L~~L~L~~N 160 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSIV-MLGFLSKLEVLDLHGN 160 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBCG-GGGGCTTCCEEECTTS
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCCh-HHccCCCCCEEECCCC
Confidence 9999995 44 5999999999999999999874 6888899999988887
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.47 E-value=7.4e-14 Score=153.10 Aligned_cols=121 Identities=26% Similarity=0.351 Sum_probs=85.7
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+|+.|+|++|+|+++.+ +..+++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++ + +.+..|++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~-~l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIK-DLS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCC-CCT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCC-CCh-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 567778888887777554 777777777777777776 344 47777777777777777774 3 34677777777777
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|+|++. ..+..+++|+.|+|++|+|++.+| +..+++|+.|++++|
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N 185 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKN 185 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSS
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCC
Confidence 77777743 456777777777777777777666 666677777776666
No 364
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.47 E-value=2.3e-14 Score=127.92 Aligned_cols=106 Identities=22% Similarity=0.206 Sum_probs=97.0
Q ss_pred CCCCcceEEeccCCCC-CCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCCccCCCCCCCCccccccce
Q 007455 92 RLDKLQRLALHQNSLH-GSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHY 170 (603)
Q Consensus 92 ~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 170 (603)
..++|+.|+|++|.++ +.+|..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.+|..+.++++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3578999999999998 78999899999999999999999965 78999999999999999999778888888999999
Q ss_pred eeccCCcCcccC--CCCccccccCcccccCC
Q 007455 171 LNLSTNFFSGEI--PDFGALSAFGNKSFIGN 199 (603)
Q Consensus 171 l~l~~N~l~~~~--~~~~~l~~l~~l~~~~n 199 (603)
|++++|++++.+ ..+..+++|+.|++++|
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N 123 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCC
Confidence 999999999864 56888999999999888
No 365
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=4.4e-16 Score=146.36 Aligned_cols=124 Identities=24% Similarity=0.317 Sum_probs=88.5
Q ss_pred cEEEEEcCCCCcccccCC------CccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCcccccccccc
Q 007455 71 RVRSINLPYMQLGGIISP------SIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFL 144 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 144 (603)
+++.++|+.+.+++..|. .+..+++|++|+|++|+|++ +| .+.++++|+.|+|++|+|+ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 456666666666666555 67777778888888887774 66 6777778888888888777 677777777778
Q ss_pred ceecccCCccCCCCCCCCccccccceeeccCCcCcccCC--CCccccccCcccccCC
Q 007455 145 TILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIP--DFGALSAFGNKSFIGN 199 (603)
Q Consensus 145 ~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~--~~~~l~~l~~l~~~~n 199 (603)
+.|+|++|++++ +| .+..+++|+.|++++|+|++.++ .+..+++|+.|++++|
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N 150 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCC
Confidence 888888887774 44 57777778888888887776543 3566666766666665
No 366
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.46 E-value=4.1e-14 Score=145.02 Aligned_cols=122 Identities=25% Similarity=0.373 Sum_probs=55.2
Q ss_pred cEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceeccc
Q 007455 71 RVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLS 150 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 150 (603)
+++.|+|++|++++..+ +..+++|++|+|++|.+++ ++ .+..+++|+.|+|++|++++ + +.+..+++|+.|+|+
T Consensus 222 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~ 295 (347)
T 4fmz_A 222 RLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-IN-AVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLN 295 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECC
T ss_pred cCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-Ch-hHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECc
Confidence 34444444444444322 4444444444444444442 22 24444444444444444442 2 234444444444444
Q ss_pred CCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 151 SNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
+|++++..|..+.++++|+.|++++|++++.+| +..+++|+.+++++|
T Consensus 296 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N 343 (347)
T 4fmz_A 296 NNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQ 343 (347)
T ss_dssp SSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC
T ss_pred CCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhh
Confidence 444444444444444444455555544444443 444444444444443
No 367
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.45 E-value=8.4e-14 Score=142.98 Aligned_cols=144 Identities=17% Similarity=0.122 Sum_probs=111.3
Q ss_pred CCccccceeecCC---------CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCC-CCccccCCCce-EE
Q 007455 56 SPCKWTGISCHTH---------DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIP-NEITNCTELRA-LY 124 (603)
Q Consensus 56 ~~c~w~gv~C~~~---------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~ 124 (603)
|-|+|..|.|++. ..++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+| ..|.++++|+. ++
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 4588999999642 2478999999999998777889999999999999999876666 46888988775 67
Q ss_pred eccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccC-CcCcccCCC-Ccccc-ccCcccccCC
Q 007455 125 LRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLST-NFFSGEIPD-FGALS-AFGNKSFIGN 199 (603)
Q Consensus 125 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~-N~l~~~~~~-~~~l~-~l~~l~~~~n 199 (603)
+++|+|++..|..|..+++|+.|++++|+|++..+..+....++..|++.+ |+++.+++. |..+. .++.|++++|
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N 164 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN 164 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccc
Confidence 778999977788899999999999999999966666666777777777754 567666553 44333 3445555554
No 368
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.44 E-value=1e-13 Score=151.90 Aligned_cols=123 Identities=24% Similarity=0.337 Sum_probs=110.5
Q ss_pred CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 69 DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
..+|+.|+|++|.|+++ +.+..+++|+.|+|++|+|++ +| .+..|++|+.|+|++|+|++. ..+..|++|+.|+
T Consensus 86 l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 159 (605)
T 1m9s_A 86 LKNLGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLS 159 (605)
T ss_dssp CTTCCEEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEE
T ss_pred CCCCCEEECcCCCCCCC--hhhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEE
Confidence 46899999999999884 379999999999999999994 54 599999999999999999964 6799999999999
Q ss_pred ccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCCc
Q 007455 149 LSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGNL 200 (603)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~ 200 (603)
|++|+|++..| +..+++|+.|+|++|+|++. +.+..+++|+.|++++|.
T Consensus 160 Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 160 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQE 208 (605)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEE
T ss_pred CcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCc
Confidence 99999997666 99999999999999999986 568889999999999884
No 369
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.42 E-value=5.8e-14 Score=129.09 Aligned_cols=108 Identities=15% Similarity=0.173 Sum_probs=95.9
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCcc--cccccccccee
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPA--NIGNLLFLTIL 147 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L 147 (603)
++++.|+|++|+|+++ +.|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|+ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 3799999999999996 68999999999999999999544444599999999999999997 6776 89999999999
Q ss_pred cccCCccCCCCCCC----CccccccceeeccCCcCccc
Q 007455 148 DLSSNSLKGAIPSS----LGRLTHLHYLNLSTNFFSGE 181 (603)
Q Consensus 148 ~l~~N~l~~~~p~~----~~~l~~L~~l~l~~N~l~~~ 181 (603)
++++|.++ .+|.. +..+++|+.|++++|.+...
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~~ 155 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHHH
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHHH
Confidence 99999999 67774 89999999999999987643
No 370
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.40 E-value=3.2e-13 Score=138.39 Aligned_cols=108 Identities=20% Similarity=0.208 Sum_probs=91.8
Q ss_pred ceEEeccC-CCCCCCCCCccccCCCceEEecc-ccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeecc
Q 007455 97 QRLALHQN-SLHGSIPNEITNCTELRALYLRA-NYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLS 174 (603)
Q Consensus 97 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 174 (603)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 46799998 998 7998 99999999999996 99998888899999999999999999999888899999999999999
Q ss_pred CCcCcccCCCCccccccCcccccCCcccCCCCCCCCCC
Q 007455 175 TNFFSGEIPDFGALSAFGNKSFIGNLDLCGRQVHKPCR 212 (603)
Q Consensus 175 ~N~l~~~~~~~~~l~~l~~l~~~~n~~l~~~~~~~~c~ 212 (603)
+|+|+++++.+.....|+.|++. +|+|.|+|.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~------~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLS------GNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECC------SSCCCCCGG
T ss_pred CCccceeCHHHcccCCceEEEee------CCCccCCCc
Confidence 99999998864332236665555 456666664
No 371
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.39 E-value=3.7e-13 Score=143.82 Aligned_cols=121 Identities=28% Similarity=0.320 Sum_probs=77.4
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|.+++..+ +..+++|+.|+|++|.+++ +|. +..+++|+.|+|++|++++..| +..+++|+.|+|
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN-ISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCc-ccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 467777777777766544 6667777777777777763 333 6666777777777777764333 566666777777
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|++++..| +..+++|+.|++++|++++. +.+..+++|+.|++++|
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n 363 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHN 363 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSS
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCC
Confidence 7776665544 56666666666666666654 34555666666666555
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.39 E-value=4.4e-14 Score=153.94 Aligned_cols=116 Identities=21% Similarity=0.219 Sum_probs=100.2
Q ss_pred EEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCCc
Q 007455 74 SINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSNS 153 (603)
Q Consensus 74 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 153 (603)
.+.+++|.++.+.+ ..|+.|+|++|+|+ .+|. |+.+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+
T Consensus 427 ~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~-~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~ 497 (567)
T 1dce_A 427 SKFLLENSVLKMEY------ADVRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNA 497 (567)
T ss_dssp HHHHHHHHHHHHHH------TTCSEEECTTSCCS-SCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSC
T ss_pred hhhhhcccccccCc------cCceEEEecCCCCC-CCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCC
Confidence 33344455555332 25899999999999 5787 999999999999999999 899999999999999999999
Q ss_pred cCCCCCCCCccccccceeeccCCcCccc--CCCCccccccCcccccCCc
Q 007455 154 LKGAIPSSLGRLTHLHYLNLSTNFFSGE--IPDFGALSAFGNKSFIGNL 200 (603)
Q Consensus 154 l~~~~p~~~~~l~~L~~l~l~~N~l~~~--~~~~~~l~~l~~l~~~~n~ 200 (603)
|++ +| .++++++|+.|+|++|+|++. |..++.+++|+.|++++|.
T Consensus 498 l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~ 544 (567)
T 1dce_A 498 LEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNS 544 (567)
T ss_dssp CCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred CCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCc
Confidence 995 77 899999999999999999999 4568999999999988883
No 373
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.38 E-value=3.1e-15 Score=140.56 Aligned_cols=121 Identities=21% Similarity=0.292 Sum_probs=105.6
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.++++|+|++|++++ +| .+..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +| .+..+++|+.|+|
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 579999999999999 56 8999999999999999999 889888889999999999999995 66 6899999999999
Q ss_pred cCCccCCCCC-CCCccccccceeeccCCcCcccCCC-----------CccccccCccc
Q 007455 150 SSNSLKGAIP-SSLGRLTHLHYLNLSTNFFSGEIPD-----------FGALSAFGNKS 195 (603)
Q Consensus 150 ~~N~l~~~~p-~~~~~l~~L~~l~l~~N~l~~~~~~-----------~~~l~~l~~l~ 195 (603)
++|++++..+ ..+..+++|+.|++++|++++.+|. +..+++|+.|+
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC
Confidence 9999994322 4688999999999999999988765 56666776654
No 374
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.38 E-value=5.5e-13 Score=144.68 Aligned_cols=112 Identities=20% Similarity=0.180 Sum_probs=78.3
Q ss_pred CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 69 DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
..+++.|+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+
T Consensus 99 l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 166 (571)
T 3cvr_A 99 PASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLS 166 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred cCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEE
Confidence 3578888888888887 555 554 88888888888874 665 57788888888888874 665 567778888
Q ss_pred ccCCccCCCCCCCCccccccceeeccCCcCcccCCCCcccccc-------CcccccCC
Q 007455 149 LSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAF-------GNKSFIGN 199 (603)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l-------~~l~~~~n 199 (603)
|++|+|++ +|. |. ++|+.|+|++|+|+.+++ +.. +| +.|++++|
T Consensus 167 Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N 217 (571)
T 3cvr_A 167 VRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCREN 217 (571)
T ss_dssp CCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC----------CCEEEECCSS
T ss_pred CCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCC
Confidence 88888774 666 54 777777777777775555 433 45 55555555
No 375
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.37 E-value=6.1e-13 Score=142.13 Aligned_cols=122 Identities=29% Similarity=0.379 Sum_probs=103.9
Q ss_pred CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceec
Q 007455 69 DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILD 148 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 148 (603)
..+++.|+|++|++++. +.+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++. |. +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEE
Confidence 45799999999999875 468889999999999999985544 88899999999999999954 43 88899999999
Q ss_pred ccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 149 LSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 149 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
|++|++++..| +..+++|+.|++++|++++.++ +..+++|+.|++++|
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n 341 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNN 341 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSS
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCC
Confidence 99999996544 8889999999999999998877 778888998888887
No 376
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.37 E-value=1.3e-12 Score=138.92 Aligned_cols=117 Identities=21% Similarity=0.266 Sum_probs=79.1
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.++++|+|++|+++++ | .+..+++|++|+|++|+|++ +| ++.+++|++|+|++|+|++ +| ++++++|++|+|
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 3577777777777764 3 56777777777777777764 34 6677777777777777774 33 667777777777
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|++++ +| +.++++|+.|++++|+|++. +++.+++|+.|++++|
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l--~l~~l~~L~~L~l~~n 158 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEI--DVSHNTQLTELDCHLN 158 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCC--CCTTCTTCCEEECTTC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCcccee--ccccCCcCCEEECCCC
Confidence 7777774 43 66777777777777777764 2556666666666666
No 377
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.32 E-value=3.3e-12 Score=125.31 Aligned_cols=148 Identities=16% Similarity=0.115 Sum_probs=114.6
Q ss_pred HHHHHhhCCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCC-CCeeeecceeeecCCccE
Q 007455 305 EIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIK-HINLVNLRGYCRLPATKL 383 (603)
Q Consensus 305 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 383 (603)
.+...+..|+....++.|+.+.||++... ++.+++|............+.+|+++++.+. +..+.++++++...+..|
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 34456678888888898999999999865 5789999886432222345889999999884 677888999998888899
Q ss_pred EEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------
Q 007455 384 LIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC-------------------------------- 431 (603)
Q Consensus 384 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------- 431 (603)
+||||++|.+|.+.... ......++.+++++|..||+..
T Consensus 87 lv~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN 157 (263)
T ss_dssp EEEECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred EEEEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence 99999999998775321 1123467889999999999810
Q ss_pred ------------------------CCCeEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 432 ------------------------CPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 432 ------------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
.+.++|||++|.||++++++.+.|+||+.+.
T Consensus 158 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876556799999764
No 378
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.32 E-value=4.4e-13 Score=147.21 Aligned_cols=135 Identities=20% Similarity=0.205 Sum_probs=82.3
Q ss_pred CCCCCCCCCCCCccccceee------cCCCCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCC
Q 007455 46 LLGNWQATEESPCKWTGISC------HTHDQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTE 119 (603)
Q Consensus 46 ~l~~w~~~~~~~c~w~gv~C------~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 119 (603)
..++|.. +.+||.|+|..| .....+++.|++++|+|+. +|..+. ++|++|+|++|+|+ .+|. .+++
T Consensus 11 ~w~~W~~-~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~~-lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 11 VWSAWRR-AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp HHHHHHH-TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCSC-CCSCCC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHHHHh-cCCcchhccccccCcccccccCCCCcEEEecCCCcCc-cChhhC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 3456753 345788866421 1111347777888887774 555554 67777777777777 5665 4577
Q ss_pred CceEEeccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 120 LRALYLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 120 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|+.|++++|+|+++++. +++|+.|++++|
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L~~N~l~~lp~~---l~~L~~L~Ls~N 151 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWIFGNQLTSLPVL---PPGLQELSVSDN 151 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSS
T ss_pred CCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEECCCCCCCcCCCC---CCCCCEEECcCC
Confidence 777777777777 4554 5567777777777776 3444 345566666666666654443 245555555554
No 379
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.31 E-value=2.9e-12 Score=131.12 Aligned_cols=122 Identities=26% Similarity=0.373 Sum_probs=78.4
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.++++|+|++|+++++.+ +..+++|++|+|++|.++ .+| .+.++++|++|+|++|++++ +|. +..+++|+.|++
T Consensus 66 ~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~-~~~-~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l 139 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT-DIS-ALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSLNL 139 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCccEEEccCCccccchh--hhcCCcCCEEEccCCccc-Cch-HHcCCCcCCEEECcCCcccC-chh-hccCCceeEEEC
Confidence 456777777777766433 666777777777777776 344 46677777777777777763 333 666777777777
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|...+.++ .+..+++|+.|++++|.+++.++ +..+++|+.|++++|
T Consensus 140 ~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 140 GANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYN 187 (347)
T ss_dssp TTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTS
T ss_pred CCCCCccccc-chhhCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCC
Confidence 7775543333 36667777777777777665544 566666666666655
No 380
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.29 E-value=5.4e-12 Score=134.13 Aligned_cols=117 Identities=20% Similarity=0.191 Sum_probs=80.6
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.++++|+|++|+++++ | ++.+++|++|+|++|+|++ +| ++++++|++|+|++|++++ +| +..+++|+.|++
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 5678888888888774 3 7777888888888888874 34 7777888888888888875 44 777777788888
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|++++ ++ +.++++|+.|++++|+..+.+ .+..+++|+.|++++|
T Consensus 135 ~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~ls~n 180 (457)
T 3bz5_A 135 ARNTLTE-ID--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTTLDCSFN 180 (457)
T ss_dssp TTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCEEECCSS
T ss_pred CCCccce-ec--cccCCcCCEEECCCCCccccc-ccccCCcCCEEECCCC
Confidence 8777775 33 566666666666666444333 3455556666655555
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.28 E-value=4.8e-14 Score=143.82 Aligned_cols=108 Identities=21% Similarity=0.226 Sum_probs=47.9
Q ss_pred cEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCC-CCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 71 RVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGS-IPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
+++.|+|++|.+++..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|++++..|..+..+++|++|+|
T Consensus 71 ~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred cceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 344444444444443322 33344444444444444432 3444444444444444444444444444444444444444
Q ss_pred cCC-ccCC-CCCCCCccccccceeeccCC-cCc
Q 007455 150 SSN-SLKG-AIPSSLGRLTHLHYLNLSTN-FFS 179 (603)
Q Consensus 150 ~~N-~l~~-~~p~~~~~l~~L~~l~l~~N-~l~ 179 (603)
++| .+++ .++..+.++++|+.|++++| .++
T Consensus 150 ~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~ 182 (336)
T 2ast_B 150 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT 182 (336)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC
T ss_pred CCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC
Confidence 444 3332 13333444444444444444 444
No 382
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.27 E-value=1.3e-11 Score=131.08 Aligned_cols=115 Identities=21% Similarity=0.224 Sum_probs=69.3
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|+++++ +.. .++|++|+|++|++++ +| .|+++++|++|+|++|++++ +|..+ ++|++|++
T Consensus 111 ~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 3455555555555542 111 1567777777777763 66 47777777777777777773 55433 36777777
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|++++ +| .+.++++|+.|++++|++++.+... .+|+.|++++|
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~~---~~L~~L~l~~n 225 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDLP---LSLESIVAGNN 225 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCCC---TTCCEEECCSS
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCCc---CcccEEECcCC
Confidence 7777764 55 4666777777777777766644321 35555555555
No 383
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.26 E-value=9.5e-12 Score=136.57 Aligned_cols=54 Identities=24% Similarity=0.161 Sum_probs=25.2
Q ss_pred cccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 142 LFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 142 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+.+|+.+..+++|+.|++++|
T Consensus 241 ~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N 294 (622)
T 3g06_A 241 SELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGN 294 (622)
T ss_dssp TTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSC
T ss_pred CcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCC
Confidence 34444444444444 3333 234455555555555544444444555555544444
No 384
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.22 E-value=2.1e-13 Score=142.02 Aligned_cols=130 Identities=20% Similarity=0.260 Sum_probs=69.5
Q ss_pred CcEEEEEcCCCCccc----ccCCCccCC---------CCcceEEeccCCCC-CCCC---CCccccCCCceEEeccccCC-
Q 007455 70 QRVRSINLPYMQLGG----IISPSIGRL---------DKLQRLALHQNSLH-GSIP---NEITNCTELRALYLRANYLQ- 131 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~----~~~~~~~~l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~- 131 (603)
.++++|+|++|++++ .++..+..+ ++|++|+|++|+|+ +.+| ..+..+++|+.|+|++|+|+
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 201 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 201 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCH
Confidence 456666666666642 233444444 56666666666665 2333 23445566666666666655
Q ss_pred -C---CCccccccccccceecccCCccC----CCCCCCCccccccceeeccCCcCccc-----CCCC--ccccccCcccc
Q 007455 132 -G---GIPANIGNLLFLTILDLSSNSLK----GAIPSSLGRLTHLHYLNLSTNFFSGE-----IPDF--GALSAFGNKSF 196 (603)
Q Consensus 132 -~---~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~l~l~~N~l~~~-----~~~~--~~l~~l~~l~~ 196 (603)
| ..|..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|++|+|++. +..+ +.+++|+.|++
T Consensus 202 ~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L 281 (386)
T 2ca6_A 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 281 (386)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEEC
T ss_pred hHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEEC
Confidence 1 23335556666666666666663 34555555666666666666666543 1112 22455555555
Q ss_pred cCC
Q 007455 197 IGN 199 (603)
Q Consensus 197 ~~n 199 (603)
++|
T Consensus 282 ~~n 284 (386)
T 2ca6_A 282 QYN 284 (386)
T ss_dssp CSS
T ss_pred cCC
Confidence 554
No 385
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.22 E-value=2.8e-13 Score=138.05 Aligned_cols=133 Identities=17% Similarity=0.165 Sum_probs=97.0
Q ss_pred CcEEEEEcCCCCcccc-cCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccc-cCCC-CCccccccccccce
Q 007455 70 QRVRSINLPYMQLGGI-ISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRAN-YLQG-GIPANIGNLLFLTI 146 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~-~~p~~~~~l~~L~~ 146 (603)
.++++|+|++|.+++. ++..+..+++|++|+|++|.+++..|..+..+++|++|+|++| .+++ .++..+.++++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5688888888888765 6667778888888888888887777777888888888888888 6765 26666777888888
Q ss_pred ecccCC-ccCCC-CCCCCcccc-ccceeeccCC--cCc--ccCCCCccccccCcccccCCccc
Q 007455 147 LDLSSN-SLKGA-IPSSLGRLT-HLHYLNLSTN--FFS--GEIPDFGALSAFGNKSFIGNLDL 202 (603)
Q Consensus 147 L~l~~N-~l~~~-~p~~~~~l~-~L~~l~l~~N--~l~--~~~~~~~~l~~l~~l~~~~n~~l 202 (603)
|+|++| .+++. ++..+..++ +|+.|++++| .++ +.+..+..+++|+.|++++|..+
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l 235 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVML 235 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTC
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcC
Confidence 888888 77743 456677777 7888888887 343 22333556677777777776433
No 386
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.21 E-value=3.1e-11 Score=128.19 Aligned_cols=115 Identities=23% Similarity=0.315 Sum_probs=95.2
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.|+|++|.+++ +|.. +++|++|+|++|+++ .+|.. .++|++|+|++|++++ +| .|.++++|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 578999999999988 5543 478999999999998 45532 2689999999999995 77 5999999999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|++++ +|..+ ++|+.|++++|++++. |+++.+++|+.|++++|
T Consensus 161 ~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~~~~~l~~L~~L~l~~N 205 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-PELQNLPFLTAIYADNN 205 (454)
T ss_dssp CSSCCSC-CCCCC---TTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSS
T ss_pred CCCcCcc-cCCCc---ccccEEECcCCcCCcC-ccccCCCCCCEEECCCC
Confidence 9999994 66644 5899999999999985 47888999999988887
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.21 E-value=5.4e-13 Score=137.59 Aligned_cols=130 Identities=22% Similarity=0.283 Sum_probs=83.8
Q ss_pred CcEEEEEcCCCCcccccC----CCccCCC-CcceEEeccCCCCCCCCCCcccc-----CCCceEEeccccCCCCCccccc
Q 007455 70 QRVRSINLPYMQLGGIIS----PSIGRLD-KLQRLALHQNSLHGSIPNEITNC-----TELRALYLRANYLQGGIPANIG 139 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~ 139 (603)
.++++|+|++|.+++..+ ..|..++ +|++|+|++|+|++..+..+..+ ++|++|+|++|+|++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 347777777777777555 5566676 77777777777776666666664 7777777777777766665444
Q ss_pred cc-----cccceecccCCccCCCCCCCCcc-----ccccceeeccCCcCcccCCC-----Ccccc-ccCcccccCC
Q 007455 140 NL-----LFLTILDLSSNSLKGAIPSSLGR-----LTHLHYLNLSTNFFSGEIPD-----FGALS-AFGNKSFIGN 199 (603)
Q Consensus 140 ~l-----~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~l~l~~N~l~~~~~~-----~~~l~-~l~~l~~~~n 199 (603)
.. ++|+.|+|++|+|++..+..+.. .++|+.|+|++|+|+..... +..+. +|+.|++++|
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n 177 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGN 177 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTS
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCC
Confidence 43 67777777777777544433332 24777777777777743221 22222 5666666655
No 388
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.19 E-value=4.2e-13 Score=139.72 Aligned_cols=130 Identities=18% Similarity=0.275 Sum_probs=63.7
Q ss_pred CcEEEEEcCCCCccc----ccCCCccCCCCcceEEeccCCCCCCCCCCc----ccc---------CCCceEEeccccCC-
Q 007455 70 QRVRSINLPYMQLGG----IISPSIGRLDKLQRLALHQNSLHGSIPNEI----TNC---------TELRALYLRANYLQ- 131 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l---------~~L~~L~L~~N~l~- 131 (603)
.++++|+|++|.+++ .++..+..+++|++|+|++|.|++..+..+ ..+ ++|++|+|++|+|+
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 345555555555554 344445555555555555555542222222 222 55555555555554
Q ss_pred CCCc---cccccccccceecccCCccC--C---CCCCCCccccccceeeccCCcCc----c-cCCCCccccccCcccccC
Q 007455 132 GGIP---ANIGNLLFLTILDLSSNSLK--G---AIPSSLGRLTHLHYLNLSTNFFS----G-EIPDFGALSAFGNKSFIG 198 (603)
Q Consensus 132 ~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~l~l~~N~l~----~-~~~~~~~l~~l~~l~~~~ 198 (603)
+.+| ..+..+++|+.|+|++|+|+ | ..|..+..+++|+.|+|++|.|+ + .+..+..+++|+.|++++
T Consensus 174 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~ 253 (386)
T 2ca6_A 174 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 253 (386)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCC
Confidence 2233 24445555555555555555 1 23334555555666666665553 1 222244445555555554
Q ss_pred C
Q 007455 199 N 199 (603)
Q Consensus 199 n 199 (603)
|
T Consensus 254 n 254 (386)
T 2ca6_A 254 C 254 (386)
T ss_dssp C
T ss_pred C
Confidence 4
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.15 E-value=2.3e-12 Score=132.86 Aligned_cols=126 Identities=20% Similarity=0.168 Sum_probs=105.8
Q ss_pred EEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCC----CCccccC-CCceEEeccccCCCCCccccccc-----cc
Q 007455 74 SINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIP----NEITNCT-ELRALYLRANYLQGGIPANIGNL-----LF 143 (603)
Q Consensus 74 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 143 (603)
.+.|++|++++.+|..+...++|++|+|++|.|++..+ ..|..++ +|++|+|++|+|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999988877777889999999999996655 6788888 99999999999998888888886 99
Q ss_pred cceecccCCccCCCCCCCCccc-----cccceeeccCCcCcccCCC-----Ccc-ccccCcccccCC
Q 007455 144 LTILDLSSNSLKGAIPSSLGRL-----THLHYLNLSTNFFSGEIPD-----FGA-LSAFGNKSFIGN 199 (603)
Q Consensus 144 L~~L~l~~N~l~~~~p~~~~~l-----~~L~~l~l~~N~l~~~~~~-----~~~-l~~l~~l~~~~n 199 (603)
|++|+|++|++++..+..+... ++|+.|+|++|+|++..+. +.. ..+|+.|++++|
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N 148 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGN 148 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTS
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCC
Confidence 9999999999997766655444 8999999999999977653 222 257888888877
No 390
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.14 E-value=4.1e-11 Score=117.12 Aligned_cols=137 Identities=14% Similarity=0.030 Sum_probs=99.1
Q ss_pred CCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCe--eeecceeeecCCccEEEEEec
Q 007455 312 ALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHIN--LVNLRGYCRLPATKLLIYDYL 389 (603)
Q Consensus 312 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~ 389 (603)
.+....+.+.|..+.||++...++..+++|..... ....+.+|+.+++.+.+.+ +.+++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34433333456669999998777778999987543 2234788999999886444 556888888777889999999
Q ss_pred CCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------
Q 007455 390 SMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC-------------------------------------- 431 (603)
Q Consensus 390 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------- 431 (603)
+|.++. ... .+ ...++.++++.|..||+..
T Consensus 98 ~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 98 PGQDLL--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp SSEETT--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred CCcccC--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 998884 211 11 1256677788888888742
Q ss_pred -----------------CCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 432 -----------------CPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 432 -----------------~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
...++|||++|.||++++++.+.|+|||.+..
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998776667999998753
No 391
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.12 E-value=8.1e-11 Score=120.61 Aligned_cols=130 Identities=22% Similarity=0.122 Sum_probs=92.9
Q ss_pred CCcEEEEEcCCCCcccccC-CCccCCCCcce-EEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccc-------
Q 007455 69 DQRVRSINLPYMQLGGIIS-PSIGRLDKLQR-LALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIG------- 139 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~------- 139 (603)
..+|++|+|++|++.+.+| ..|.++++|.+ +++++|+|+...|+.|..+++|++|++++|+|++..+..+.
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 4689999999999876555 56888888765 66778999877788899999999999999998854443322
Q ss_pred ------------------cc-cccceecccCCccCCCCCCCCccccccceeecc-CCcCcccCCC-CccccccCcccccC
Q 007455 140 ------------------NL-LFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLS-TNFFSGEIPD-FGALSAFGNKSFIG 198 (603)
Q Consensus 140 ------------------~l-~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~-~N~l~~~~~~-~~~l~~l~~l~~~~ 198 (603)
.+ ..|+.|+|++|+|+ .+|.......+|+.|+++ +|.++.++++ |..+++|+.|++++
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~ 211 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISR 211 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTT
T ss_pred hhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCC
Confidence 22 24566777777777 555555556677777775 4566665554 56777777777777
Q ss_pred C
Q 007455 199 N 199 (603)
Q Consensus 199 n 199 (603)
|
T Consensus 212 N 212 (350)
T 4ay9_X 212 T 212 (350)
T ss_dssp S
T ss_pred C
Confidence 6
No 392
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.08 E-value=3.6e-10 Score=116.20 Aligned_cols=141 Identities=18% Similarity=0.271 Sum_probs=105.9
Q ss_pred CCeeeecCCeEEEEEEECCCCEEEEEEeC--CCC-CChHHHHHHHHHHHhhCC--CCeeeecceeeecC---CccEEEEE
Q 007455 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRID--RSR-EGSDQVFERELEILGSIK--HINLVNLRGYCRLP---ATKLLIYD 387 (603)
Q Consensus 316 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~e 387 (603)
.+.|+.|.++.||+....+ +.+++|+.. ... ......+.+|+.+++.+. +..+.++++++.+. +..|+|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4678999999999988765 688888765 322 122346889999999997 45578888888766 45799999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC------------------------------------ 431 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------ 431 (603)
|++|..+.+... ..++..++..++.++++.|..||+..
T Consensus 122 ~v~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 122 FVSGRVLWDQSL------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCCBCCCCTTC------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred ecCCeecCCCcc------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 999988854221 11677888899999999999999831
Q ss_pred -------------------CCCeEEecCCCCCeEECCCCC--eEEeecccccc
Q 007455 432 -------------------CPKIIHRDIKSSNILLDENLE--PHVSDFGLAKL 463 (603)
Q Consensus 432 -------------------~~~ivH~Dlkp~NIll~~~~~--~kl~DfG~~~~ 463 (603)
.+.++|||+++.||+++.++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999998764 68999998864
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.00 E-value=3.4e-12 Score=135.96 Aligned_cols=130 Identities=18% Similarity=0.109 Sum_probs=78.8
Q ss_pred CcEEEEEcCCCCccccc-----CCCccCCCCcceEEeccCCCCCC----CCCCccccCCCceEEeccccCCCCCcccccc
Q 007455 70 QRVRSINLPYMQLGGII-----SPSIGRLDKLQRLALHQNSLHGS----IPNEITNCTELRALYLRANYLQGGIPANIGN 140 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 140 (603)
.+++.|+|++|.+++.. +..+..+++|++|+|++|+|+.. ++..+.++++|+.|+|++|++++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 46777888877776532 22223467777777777777642 5556666777777777777776443433433
Q ss_pred c-----cccceecccCCccCCC----CCCCCccccccceeeccCCcCcccCCC-Ccc-----ccccCcccccCC
Q 007455 141 L-----LFLTILDLSSNSLKGA----IPSSLGRLTHLHYLNLSTNFFSGEIPD-FGA-----LSAFGNKSFIGN 199 (603)
Q Consensus 141 l-----~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~-----l~~l~~l~~~~n 199 (603)
. ++|+.|+|++|.+++. ++..+..+++|+.|++++|++++..+. +.. .++|+.|++++|
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 380 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC
Confidence 2 5677777777777643 344555667777777777776654221 111 345666666555
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.99 E-value=1.3e-11 Score=120.02 Aligned_cols=124 Identities=19% Similarity=0.153 Sum_probs=84.8
Q ss_pred CccccceeecCCCCcEEEEEcCC---CCcccccC------------------------CCccCCCCcce--EEeccCCCC
Q 007455 57 PCKWTGISCHTHDQRVRSINLPY---MQLGGIIS------------------------PSIGRLDKLQR--LALHQNSLH 107 (603)
Q Consensus 57 ~c~w~gv~C~~~~~~l~~L~L~~---n~l~~~~~------------------------~~~~~l~~L~~--L~L~~N~l~ 107 (603)
.|+|.|+.|+....+|..+...+ ..+.+.++ ..|...+.|.. ++++.|+..
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 48999999987666776666544 12222221 11333344444 667777543
Q ss_pred CCCCCC----ccccCCCceEEeccccCCC--CCccccccccccceecccCCccCCCCCCCCcccc--ccceeeccCCcCc
Q 007455 108 GSIPNE----ITNCTELRALYLRANYLQG--GIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLT--HLHYLNLSTNFFS 179 (603)
Q Consensus 108 ~~~p~~----~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~--~L~~l~l~~N~l~ 179 (603)
.++.. ..++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|+.|+|++|.++
T Consensus 157 -~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 157 -CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp -HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTG
T ss_pred -HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCc
Confidence 33322 2457899999999999997 4557778899999999999999954 3455555 8999999999998
Q ss_pred ccCC
Q 007455 180 GEIP 183 (603)
Q Consensus 180 ~~~~ 183 (603)
+..|
T Consensus 234 ~~~~ 237 (267)
T 3rw6_A 234 DTFR 237 (267)
T ss_dssp GGCS
T ss_pred cccC
Confidence 7665
No 395
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.97 E-value=3.5e-10 Score=113.40 Aligned_cols=185 Identities=21% Similarity=0.214 Sum_probs=120.2
Q ss_pred CCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCC-CCe--eeecceeeecCC---ccEEEEEec
Q 007455 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIK-HIN--LVNLRGYCRLPA---TKLLIYDYL 389 (603)
Q Consensus 316 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~ 389 (603)
.+.++.|....||+.. +.+++|..... .....+.+|+++++.+. +.. +.+++....... ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4678999999999863 56888875432 23466899999998883 333 334444433332 348899999
Q ss_pred CCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---------------------------------------
Q 007455 390 SMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD--------------------------------------- 430 (603)
Q Consensus 390 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~--------------------------------------- 430 (603)
+|.++.+.... .++..++..++.++++.+..||+.
T Consensus 99 ~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 99 KGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 99888653321 166777788888888888888861
Q ss_pred ----------------CCCCeEEecCCCCCeEECC--CCCeEEeecccccccCCCCcceeec--------------cccc
Q 007455 431 ----------------CCPKIIHRDIKSSNILLDE--NLEPHVSDFGLAKLLVDEEAHVTTV--------------VAGT 478 (603)
Q Consensus 431 ----------------~~~~ivH~Dlkp~NIll~~--~~~~kl~DfG~~~~~~~~~~~~~~~--------------~~gt 478 (603)
..+.++|+|++|.||++++ ++.+.|+||+.+..-... ...... ....
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHHHHHHH
Confidence 1135899999999999998 456789999988653211 100000 0000
Q ss_pred ccccC-ccccccCCCCcccchHhHHHHHHHHHhCCCCC
Q 007455 479 FGYLA-PEYLQSGRATEKSDVYSFGVLLLELVTGKRPT 515 (603)
Q Consensus 479 ~~y~a-PE~~~~~~~~~~~Dv~slG~vl~elltg~~p~ 515 (603)
.+... |+... +.....+.|++|.++|.+.+|..+|
T Consensus 252 Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 252 YKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 01111 22111 1112368999999999999998775
No 396
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.91 E-value=1.7e-11 Score=130.62 Aligned_cols=129 Identities=19% Similarity=0.184 Sum_probs=73.2
Q ss_pred cEEEEEcCCCCccc----ccCCCccCCCCcceEEeccCCCCCCCCCCcc-----ccCCCceEEeccccCCCC----Cccc
Q 007455 71 RVRSINLPYMQLGG----IISPSIGRLDKLQRLALHQNSLHGSIPNEIT-----NCTELRALYLRANYLQGG----IPAN 137 (603)
Q Consensus 71 ~l~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~p~~ 137 (603)
++++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. ..++|++|+|++|++++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 46667777776663 4456666666777777777666533222222 234566777777666642 2444
Q ss_pred cccccccceecccCCccCCCCCCCCcc-----ccccceeeccCCcCccc-----CCCCccccccCcccccCC
Q 007455 138 IGNLLFLTILDLSSNSLKGAIPSSLGR-----LTHLHYLNLSTNFFSGE-----IPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 138 ~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~l~l~~N~l~~~-----~~~~~~l~~l~~l~~~~n 199 (603)
+..+++|+.|+|++|.+++..+..+.. +++|+.|++++|.+++. +..+..+++|+.|++++|
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n 237 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSN 237 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSS
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCC
Confidence 555666777777777665433222321 34666777777766652 222444556666666655
No 397
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.86 E-value=1.8e-09 Score=109.43 Aligned_cols=59 Identities=14% Similarity=0.120 Sum_probs=34.2
Q ss_pred ccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccC-cccccCCc
Q 007455 141 LLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFG-NKSFIGNL 200 (603)
Q Consensus 141 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~-~l~~~~n~ 200 (603)
+++|+.|+|++|+++...+.+|.++++|+.|+|.+| ++.+.+. |..+.+|+ .+.+.+++
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~~l 285 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPASV 285 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECTTC
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcccc
Confidence 456666666666666444445666666666666665 5544443 55556665 55555543
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.82 E-value=4.5e-11 Score=123.22 Aligned_cols=130 Identities=18% Similarity=0.159 Sum_probs=90.3
Q ss_pred CcEEEEEcCCCCcccccCCCc-cCCCCcceEEeccCCCCCCCCCCc-----cccCCCceEEeccccCCC----CCccccc
Q 007455 70 QRVRSINLPYMQLGGIISPSI-GRLDKLQRLALHQNSLHGSIPNEI-----TNCTELRALYLRANYLQG----GIPANIG 139 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~ 139 (603)
.+++.|+|++|.|+..-...+ ..+++|+.|+|++|.|+..-...+ ...++|+.|+|++|+|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 478889999888865433222 346788899999998864332333 235789999999998873 2445556
Q ss_pred cccccceecccCCccCCC----CCCCCccccccceeeccCCcCcccCC-----CCccccccCcccccCC
Q 007455 140 NLLFLTILDLSSNSLKGA----IPSSLGRLTHLHYLNLSTNFFSGEIP-----DFGALSAFGNKSFIGN 199 (603)
Q Consensus 140 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~~~-----~~~~l~~l~~l~~~~n 199 (603)
.+++|++|+|++|.|++. ++..+...++|+.|+|++|.|+.... .+...++|+.|++++|
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N 249 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFN 249 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTS
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCC
Confidence 788899999999988742 34556677889999999998875321 1334467777777776
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.70 E-value=5.8e-10 Score=114.91 Aligned_cols=111 Identities=21% Similarity=0.225 Sum_probs=88.7
Q ss_pred cEEEEEcCCCCcccccCCCc-----cCCCCcceEEeccCCCCC----CCCCCccccCCCceEEeccccCCCC----Cccc
Q 007455 71 RVRSINLPYMQLGGIISPSI-----GRLDKLQRLALHQNSLHG----SIPNEITNCTELRALYLRANYLQGG----IPAN 137 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~ 137 (603)
+++.|+|++|+|+......+ ...++|++|+|++|.|+. .++..+..+++|++|+|++|+|++. ++..
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~ 206 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHH
Confidence 69999999999986544443 246889999999999974 2445557789999999999999842 3566
Q ss_pred cccccccceecccCCccCCC----CCCCCccccccceeeccCCcCccc
Q 007455 138 IGNLLFLTILDLSSNSLKGA----IPSSLGRLTHLHYLNLSTNFFSGE 181 (603)
Q Consensus 138 ~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~~~ 181 (603)
+...++|+.|+|++|.|++. ++..+...++|+.|+|++|.|+..
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 77888999999999999853 334455678999999999999854
No 400
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.68 E-value=2.1e-09 Score=104.36 Aligned_cols=80 Identities=24% Similarity=0.283 Sum_probs=65.9
Q ss_pred cCCCCcceEEeccCCCCC--CCCCCccccCCCceEEeccccCCCCCcccccccc--ccceecccCCccCCCCCC------
Q 007455 91 GRLDKLQRLALHQNSLHG--SIPNEITNCTELRALYLRANYLQGGIPANIGNLL--FLTILDLSSNSLKGAIPS------ 160 (603)
Q Consensus 91 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~------ 160 (603)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 468899999999999997 4556678999999999999999954 4456666 999999999999987763
Q ss_pred -CCccccccceee
Q 007455 161 -SLGRLTHLHYLN 172 (603)
Q Consensus 161 -~~~~l~~L~~l~ 172 (603)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 366778888776
No 401
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.66 E-value=1.1e-07 Score=95.89 Aligned_cols=136 Identities=20% Similarity=0.216 Sum_probs=99.7
Q ss_pred CCCCCCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCC----CeeeecceeeecCCccEEEEE
Q 007455 312 ALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKH----INLVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 312 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e 387 (603)
.....+.++.|..+.||+. ++.+++|..... .....+.+|+++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5556678999999999998 567888876321 223458899999988865 123444444 56789999
Q ss_pred ecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCC-----------------------------------
Q 007455 388 YLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCC----------------------------------- 432 (603)
Q Consensus 388 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~----------------------------------- 432 (603)
|++|.++.+.... .++..+...++.++++.+..||+...
T Consensus 108 ~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 108 YIKGERITYEQYH------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp CCCCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ecCCccccccccc------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 9999888743211 15666677778888888888885421
Q ss_pred -------------------------CCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 433 -------------------------PKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 433 -------------------------~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
+.++|+|++|.||++++++.+.|+||+.+..
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999866679999998865
No 402
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.66 E-value=2.2e-08 Score=101.40 Aligned_cols=100 Identities=15% Similarity=0.049 Sum_probs=58.2
Q ss_pred CCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccc-eecccCCccCCCCCCCCcccccccee
Q 007455 93 LDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLT-ILDLSSNSLKGAIPSSLGRLTHLHYL 171 (603)
Q Consensus 93 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~l 171 (603)
+++|+.|+|++|+++..-+.+|.++++|+.|+|++| ++..-+..|.+|++|+ .|+|.+ +++..-+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 456666666666666333345666666666666665 5544445566666666 666666 4553444566666666666
Q ss_pred eccCCcCcccCCC-CccccccCcc
Q 007455 172 NLSTNFFSGEIPD-FGALSAFGNK 194 (603)
Q Consensus 172 ~l~~N~l~~~~~~-~~~l~~l~~l 194 (603)
++++|+++.+.+. |..+++|+.+
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEE
T ss_pred EeCCCccCccchhhhcCCcchhhh
Confidence 6666666655543 5555555544
No 403
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.56 E-value=3.8e-07 Score=90.17 Aligned_cols=76 Identities=16% Similarity=0.182 Sum_probs=60.6
Q ss_pred CCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCC---eeeecceeeecCCccEEEEEecCCC
Q 007455 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHI---NLVNLRGYCRLPATKLLIYDYLSMG 392 (603)
Q Consensus 316 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~g 392 (603)
.+.|+.|.++.||++...+++.++||+...........+.+|++.++.+.+. .+.+++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 4679999999999999988889999986543333345689999999999765 466777653 469999999998
Q ss_pred Ccc
Q 007455 393 SLD 395 (603)
Q Consensus 393 sL~ 395 (603)
++.
T Consensus 96 ~~~ 98 (288)
T 3d1u_A 96 PPT 98 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 404
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.53 E-value=9.7e-09 Score=112.80 Aligned_cols=104 Identities=10% Similarity=0.089 Sum_probs=63.4
Q ss_pred cEEEEEcCCCC-ccc-ccCCCccCCCCcceEEeccCCCCCC----CCCCccccCCCceEEeccccCCC----CCcccccc
Q 007455 71 RVRSINLPYMQ-LGG-IISPSIGRLDKLQRLALHQNSLHGS----IPNEITNCTELRALYLRANYLQG----GIPANIGN 140 (603)
Q Consensus 71 ~l~~L~L~~n~-l~~-~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~ 140 (603)
++++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 37777777765 211 1122233567777777777777644 23334566777777777777762 33444556
Q ss_pred ccccceecccCCccCCCCCCCCccccccceeeccC
Q 007455 141 LLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLST 175 (603)
Q Consensus 141 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~ 175 (603)
+++|+.|+|++|.+.+ +|..+.++++|+.|++++
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 7777777777777763 445556666666666653
No 405
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=3.9e-09 Score=97.42 Aligned_cols=111 Identities=14% Similarity=0.206 Sum_probs=80.6
Q ss_pred CCcEEEEEcCCC-Ccccc----cCCCccCCCCcceEEeccCCCCCC----CCCCccccCCCceEEeccccCCCC----Cc
Q 007455 69 DQRVRSINLPYM-QLGGI----ISPSIGRLDKLQRLALHQNSLHGS----IPNEITNCTELRALYLRANYLQGG----IP 135 (603)
Q Consensus 69 ~~~l~~L~L~~n-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p 135 (603)
...+++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 357889999998 88642 344566678899999999988632 333455567899999999988843 45
Q ss_pred cccccccccceecc--cCCccCCC----CCCCCccccccceeeccCCcCc
Q 007455 136 ANIGNLLFLTILDL--SSNSLKGA----IPSSLGRLTHLHYLNLSTNFFS 179 (603)
Q Consensus 136 ~~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~l~l~~N~l~ 179 (603)
..+...++|++|+| ++|.|... +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56677788899999 77888743 3334555678888888888875
No 406
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.42 E-value=9.6e-07 Score=88.25 Aligned_cols=136 Identities=17% Similarity=0.184 Sum_probs=92.4
Q ss_pred CCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCC---eeeecceeee-cCCccEEEEEecCC
Q 007455 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHI---NLVNLRGYCR-LPATKLLIYDYLSM 391 (603)
Q Consensus 316 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 391 (603)
.+.++.|....||+. ++.+++|.-.. ......+.+|+++++.+.+. .+.+++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 356888999999988 46788887422 22345689999999999642 3556666664 44567899999999
Q ss_pred CCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 007455 392 GSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHD----------------------------------------- 430 (603)
Q Consensus 392 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~----------------------------------------- 430 (603)
.++.+..-. .++..+...++.++++.|..||+.
T Consensus 98 ~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 98 QILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp EECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred eECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 888653111 033344444555555555555432
Q ss_pred ----------------CCCCeEEecCCCCCeEECC---CCCe-EEeecccccc
Q 007455 431 ----------------CCPKIIHRDIKSSNILLDE---NLEP-HVSDFGLAKL 463 (603)
Q Consensus 431 ----------------~~~~ivH~Dlkp~NIll~~---~~~~-kl~DfG~~~~ 463 (603)
..+.++|+|+++.||+++. ++.+ .|+||+.+..
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999987 4554 7999998764
No 407
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.36 E-value=4.5e-08 Score=107.43 Aligned_cols=129 Identities=10% Similarity=-0.025 Sum_probs=84.9
Q ss_pred CcEEEEEcCCCCcccc----cCCCccCCCCcceEEeccCCCCC----CCCCCccccCCCceEEeccccCCCCCccccccc
Q 007455 70 QRVRSINLPYMQLGGI----ISPSIGRLDKLQRLALHQNSLHG----SIPNEITNCTELRALYLRANYLQGGIPANIGNL 141 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 141 (603)
+++++|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.++++|+.|+|++|.+. .+|..+.++
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELVGFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGHHHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHHHHHhhh
Confidence 5789999999987665 33345667889999999998873 33444567888999999998888 477778888
Q ss_pred cccceecccCCccC---CCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 142 LFLTILDLSSNSLK---GAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 142 ~~L~~L~l~~N~l~---~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
++|+.|+++++... +..+..+..+++|+.|+++++.....+..+..+++|+.|++++|
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~ 303 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYA 303 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTC
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCC
Confidence 88888888753322 22334455555566666555544433333444555555555554
No 408
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.36 E-value=7.2e-09 Score=95.59 Aligned_cols=116 Identities=10% Similarity=0.086 Sum_probs=86.8
Q ss_pred cccCCCccCCCCcceEEeccC-CCCCC----CCCCccccCCCceEEeccccCCCC----CccccccccccceecccCCcc
Q 007455 84 GIISPSIGRLDKLQRLALHQN-SLHGS----IPNEITNCTELRALYLRANYLQGG----IPANIGNLLFLTILDLSSNSL 154 (603)
Q Consensus 84 ~~~~~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l 154 (603)
..+...+...++|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 344556777899999999999 88632 344566778999999999999842 344566678999999999999
Q ss_pred CCC----CCCCCccccccceeec--cCCcCcccCC-----CCccccccCcccccCC
Q 007455 155 KGA----IPSSLGRLTHLHYLNL--STNFFSGEIP-----DFGALSAFGNKSFIGN 199 (603)
Q Consensus 155 ~~~----~p~~~~~l~~L~~l~l--~~N~l~~~~~-----~~~~l~~l~~l~~~~n 199 (603)
+.. +...+...++|+.|+| ++|.|+..-. .+...++|+.|++++|
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n 161 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 161 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCC
Confidence 853 4567788889999999 8899985321 1333456777777665
No 409
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.36 E-value=9.7e-07 Score=86.45 Aligned_cols=136 Identities=19% Similarity=0.174 Sum_probs=96.0
Q ss_pred CeeeecCCe-EEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCC-CCeeeecceeeecCCccEEEEEecCCCC
Q 007455 317 DVVGSGGFG-TVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIK-HINLVNLRGYCRLPATKLLIYDYLSMGS 393 (603)
Q Consensus 317 ~~ig~G~~g-~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 393 (603)
+.+..|..| .||+..... +..+++|+-.. .....+.+|+..++.+. +--+.++++++.+++..++|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345666666 689887654 45688887542 23456889999998884 3346678888888899999999999988
Q ss_pred ccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------
Q 007455 394 LDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDC------------------------------------------ 431 (603)
Q Consensus 394 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------------ 431 (603)
+.+...... .....++.++++.|..||+..
T Consensus 107 ~~~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 107 AFQVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred ccccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 766543321 122345556666666666420
Q ss_pred -------------CCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 432 -------------CPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 432 -------------~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12379999999999999877677999997753
No 410
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.33 E-value=1.5e-06 Score=88.94 Aligned_cols=142 Identities=12% Similarity=0.125 Sum_probs=88.6
Q ss_pred CCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCe--eeecceeeecC-CccEEEEEecCCC
Q 007455 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHIN--LVNLRGYCRLP-ATKLLIYDYLSMG 392 (603)
Q Consensus 316 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~~g 392 (603)
.+.++.|....+|+... +++.+++|..... ..+.+|+.+++.+.... +.++++++... +..|+||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 46789999999999876 4578999976432 25889999999886433 45666666554 5689999999987
Q ss_pred Ccccccc------------------ccCCC------------C-ccCCHHHH---------------------HHHHHHH
Q 007455 393 SLDDFLH------------------EHGEG------------Q-QLLNWSAR---------------------LKIALGS 420 (603)
Q Consensus 393 sL~~~l~------------------~~~~~------------~-~~l~~~~~---------------------~~i~~~i 420 (603)
++.+.-. ..... . ..-.|... ......+
T Consensus 120 ~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 199 (362)
T 3ovc_A 120 TLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQAL 199 (362)
T ss_dssp ETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHH
Confidence 6653210 00000 0 00011111 0111112
Q ss_pred HHHHHHHHhC-CCCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 421 ARGLAYLHHD-CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 421 ~~~L~~LH~~-~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
...+.++... ..+.++|+|+.+.||++++++.+.|+||+.+..
T Consensus 200 ~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 200 DELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 2222233221 114689999999999998777788999998865
No 411
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.31 E-value=9.2e-07 Score=90.45 Aligned_cols=80 Identities=10% Similarity=0.078 Sum_probs=55.5
Q ss_pred Cee-eecCCeEEEEEEEC-------CCCEEEEEEeCCCC---CChHHHHHHHHHHHhhCC-C--CeeeecceeeecC---
Q 007455 317 DVV-GSGGFGTVYRMVMN-------DCGTFAVKRIDRSR---EGSDQVFERELEILGSIK-H--INLVNLRGYCRLP--- 379 (603)
Q Consensus 317 ~~i-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~--- 379 (603)
+.| +.|..+.+|+.... +++.+++|...... ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888999988764 24578888764322 111234788999998885 3 2466777776554
Q ss_pred CccEEEEEecCCCCccc
Q 007455 380 ATKLLIYDYLSMGSLDD 396 (603)
Q Consensus 380 ~~~~lv~e~~~~gsL~~ 396 (603)
+..++||||++|.++.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999988765
No 412
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.24 E-value=3e-08 Score=108.91 Aligned_cols=63 Identities=19% Similarity=0.236 Sum_probs=27.0
Q ss_pred ccCCCceEEeccccCCCCCcccccc-ccccceecccCCccCCCCCCCC-ccccccceeeccCCcCc
Q 007455 116 NCTELRALYLRANYLQGGIPANIGN-LLFLTILDLSSNSLKGAIPSSL-GRLTHLHYLNLSTNFFS 179 (603)
Q Consensus 116 ~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~l~l~~N~l~ 179 (603)
.+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.++
T Consensus 430 ~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 430 HCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred hCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 344444444433 333322233332 4445555555555443222222 33455555555555553
No 413
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.22 E-value=3.1e-08 Score=108.73 Aligned_cols=83 Identities=17% Similarity=0.194 Sum_probs=40.4
Q ss_pred cEEEEEcCCCCcccccCCCcc-CCCCcceEEeccC-CCCCC-CCCCccccCCCceEEeccccCCCCCccccc----cccc
Q 007455 71 RVRSINLPYMQLGGIISPSIG-RLDKLQRLALHQN-SLHGS-IPNEITNCTELRALYLRANYLQGGIPANIG----NLLF 143 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l~~ 143 (603)
++++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~ 185 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTS 185 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCc
Confidence 455555555555544444443 3555555555555 33311 222233455555555555555543333332 3445
Q ss_pred cceecccCCc
Q 007455 144 LTILDLSSNS 153 (603)
Q Consensus 144 L~~L~l~~N~ 153 (603)
|+.|+|++|.
T Consensus 186 L~~L~l~~~~ 195 (594)
T 2p1m_B 186 LVSLNISCLA 195 (594)
T ss_dssp CCEEECTTCC
T ss_pred CcEEEecccC
Confidence 5555555554
No 414
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.20 E-value=1.9e-06 Score=89.38 Aligned_cols=126 Identities=12% Similarity=0.086 Sum_probs=78.3
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+++.+.|.++ ++.+-..+|.++++|+.|+|..| ++..-..+|.+ .+|+.+.| .|.++..-+..|.+|++|+.+++
T Consensus 203 ~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 203 AGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEE
T ss_pred cccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEe
Confidence 35777788744 77777777888888888888764 44233445555 56777777 34455344556666777777777
Q ss_pred cCCccC-----CCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCCc
Q 007455 150 SSNSLK-----GAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNL 200 (603)
Q Consensus 150 ~~N~l~-----~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~ 200 (603)
.+|.+. ...+..|.++++|+.++|. |.++.+... |..+.+|+.+.+..|+
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~l 334 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPANV 334 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTTC
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECccc
Confidence 666554 2334566666677777766 335544433 5556666666665554
No 415
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.18 E-value=3.2e-06 Score=87.73 Aligned_cols=123 Identities=11% Similarity=0.109 Sum_probs=77.0
Q ss_pred cEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceeccc
Q 007455 71 RVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLS 150 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 150 (603)
+|+.+.|.+ .++.+-+.+|.++++|+.++|++|+++..-...|. .++|+.+.|.+| ++..-...|.++++|+.++|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 477788875 67777777888888888888888888733333444 577888887744 554555667777777777777
Q ss_pred CCccCCCCCCCCccccccceeeccCCcCcccCCC-CccccccCcccccCC
Q 007455 151 SNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGN 199 (603)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n 199 (603)
+| ++..-..+|.+ .+|+.+.+ .|.++.+... |..+.+|+.+.+.+|
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~ 281 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGS 281 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESS
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCc
Confidence 64 34233334444 55666666 3334444332 555555555555554
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.09 E-value=2.8e-07 Score=94.09 Aligned_cols=128 Identities=13% Similarity=0.113 Sum_probs=82.7
Q ss_pred CCcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCcc--ccCCCceEEecc--ccCCCC-----Ccccc-
Q 007455 69 DQRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEIT--NCTELRALYLRA--NYLQGG-----IPANI- 138 (603)
Q Consensus 69 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~- 138 (603)
.++|+.|+|++|.-.. +++ + .+++|+.|+|..|.+....-..+. .+++|+.|+|+. |...+. +...+
T Consensus 171 ~P~L~~L~L~g~~~l~-l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNLS-IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBTCB-CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCCce-ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 3689999998873112 333 4 378999999988887632222333 688899998863 222111 11222
Q ss_pred -ccccccceecccCCccCCCCCCCCc---cccccceeeccCCcCccc-----CCCCccccccCcccccCC
Q 007455 139 -GNLLFLTILDLSSNSLKGAIPSSLG---RLTHLHYLNLSTNFFSGE-----IPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 139 -~~l~~L~~L~l~~N~l~~~~p~~~~---~l~~L~~l~l~~N~l~~~-----~~~~~~l~~l~~l~~~~n 199 (603)
..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|+.. ...+..+++|+.|+++.|
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n 317 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYN 317 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSB
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCC
Confidence 2478999999999888743332232 478899999999988863 223355677888877766
No 417
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.06 E-value=3.7e-07 Score=93.17 Aligned_cols=127 Identities=14% Similarity=0.132 Sum_probs=84.2
Q ss_pred CcEEEEEcCCCCcc---------cccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccc-
Q 007455 70 QRVRSINLPYMQLG---------GIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIG- 139 (603)
Q Consensus 70 ~~l~~L~L~~n~l~---------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~- 139 (603)
++|+.|.+.++... +.++..+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHH
Confidence 57888888765432 123344567899999999988411 3444 4 388999999999887743333444
Q ss_pred -cccccceecccC--CccCCC-----CCCCC--ccccccceeeccCCcCcccCCC----CccccccCcccccCC
Q 007455 140 -NLLFLTILDLSS--NSLKGA-----IPSSL--GRLTHLHYLNLSTNFFSGEIPD----FGALSAFGNKSFIGN 199 (603)
Q Consensus 140 -~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~l~l~~N~l~~~~~~----~~~l~~l~~l~~~~n 199 (603)
.+++|+.|+|+. |...+. +...+ ..+++|+.|+|.+|.++..... ...+++|+.|+++.|
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n 289 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAG 289 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSS
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCC
Confidence 689999999863 332211 11122 3578999999999998743221 234678899988876
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.05 E-value=1.2e-05 Score=81.34 Aligned_cols=141 Identities=19% Similarity=0.298 Sum_probs=80.8
Q ss_pred CeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCC--Ceeeecce------eeecCCccEEEEEe
Q 007455 317 DVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKH--INLVNLRG------YCRLPATKLLIYDY 388 (603)
Q Consensus 317 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~------~~~~~~~~~lv~e~ 388 (603)
+.|+.|..+.||+....+ +.+++|..... ...+..|+.+++.+.. -.+.+++. +....+..+++|+|
T Consensus 38 ~~l~gG~~n~~~~v~~~~-~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDS-GAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETT-EEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCC-CCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 346667789999998765 46999988652 2345556666665531 12333332 12345667899999
Q ss_pred cCCCCccc--------------cccccC-----CCC-----ccCCHHHH-------------------------------
Q 007455 389 LSMGSLDD--------------FLHEHG-----EGQ-----QLLNWSAR------------------------------- 413 (603)
Q Consensus 389 ~~~gsL~~--------------~l~~~~-----~~~-----~~l~~~~~------------------------------- 413 (603)
++|.++.. .++... ... ..-.|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 99876531 011100 000 01122211
Q ss_pred HHHHHHHHHHHHHHHh----------CCCCCeEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 414 LKIALGSARGLAYLHH----------DCCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 414 ~~i~~~i~~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
..+...+.+++.+|+. ...+.++|||+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223345666653 123479999999999999888899999999775
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.93 E-value=2.2e-05 Score=81.37 Aligned_cols=75 Identities=11% Similarity=-0.007 Sum_probs=49.1
Q ss_pred CCeeeecCCeEEEEEEEC-CCCEEEEEEeCCCCC-------ChHHHHHHHHHHHhhCCC--Ce-eeecceeeecCCccEE
Q 007455 316 EDVVGSGGFGTVYRMVMN-DCGTFAVKRIDRSRE-------GSDQVFERELEILGSIKH--IN-LVNLRGYCRLPATKLL 384 (603)
Q Consensus 316 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 384 (603)
.+.||.|.++.||++... +++.++||....... ....++..|+++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357899999999999764 457899997643211 123456789999887742 33 3345443 4456789
Q ss_pred EEEecCCC
Q 007455 385 IYDYLSMG 392 (603)
Q Consensus 385 v~e~~~~g 392 (603)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.90 E-value=4e-05 Score=76.35 Aligned_cols=139 Identities=18% Similarity=0.219 Sum_probs=91.7
Q ss_pred CCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCC---CCeeeecceeeecCCccEEEEEecCCC
Q 007455 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIK---HINLVNLRGYCRLPATKLLIYDYLSMG 392 (603)
Q Consensus 316 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~g 392 (603)
.+.|+.|....+|+... +++.+++|..... ....+.+|++.|+.+. ...+.+++++....+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 35789999999999876 4578999976432 3556889999998884 356788888888778899999999998
Q ss_pred Ccccc-----------ccccCC-C-----------------CccCCHHHHH---HHHH----------------HHHHH-
Q 007455 393 SLDDF-----------LHEHGE-G-----------------QQLLNWSARL---KIAL----------------GSARG- 423 (603)
Q Consensus 393 sL~~~-----------l~~~~~-~-----------------~~~l~~~~~~---~i~~----------------~i~~~- 423 (603)
.+..- ++.... . ...-+|.... ++.. .+...
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 76321 111111 0 0012344321 1111 11111
Q ss_pred HHHHHh-CCCCCeEEecCCCCCeEECCCCCeEEeecc
Q 007455 424 LAYLHH-DCCPKIIHRDIKSSNILLDENLEPHVSDFG 459 (603)
Q Consensus 424 L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 459 (603)
...|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223322 2346899999999999999887 8899974
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.76 E-value=0.00014 Score=71.72 Aligned_cols=76 Identities=16% Similarity=0.195 Sum_probs=56.1
Q ss_pred CCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCC---eeeecceeeecCCccEEEEEecCCC
Q 007455 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHI---NLVNLRGYCRLPATKLLIYDYLSMG 392 (603)
Q Consensus 316 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~g 392 (603)
.+.+|.|..+.||+....+|+.|++|+-..........+.+|++.|+.+.-. -+.+++++ +..++||||++++
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~ 95 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeeccc
Confidence 4678999999999999999999999986554444455688999999988422 23344443 2358899999887
Q ss_pred Ccc
Q 007455 393 SLD 395 (603)
Q Consensus 393 sL~ 395 (603)
...
T Consensus 96 ~~~ 98 (288)
T 3f7w_A 96 PPT 98 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 422
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.67 E-value=5.8e-06 Score=74.37 Aligned_cols=82 Identities=15% Similarity=0.156 Sum_probs=33.0
Q ss_pred CcceEEeccCCCCCCCCCCccccCCCceEEecccc-CCCCCccccccc----cccceecccCCc-cCCCCCCCCcccccc
Q 007455 95 KLQRLALHQNSLHGSIPNEITNCTELRALYLRANY-LQGGIPANIGNL----LFLTILDLSSNS-LKGAIPSSLGRLTHL 168 (603)
Q Consensus 95 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~L 168 (603)
+|+.|||+++.|+..--..+..+++|+.|+|+++. |+..--..+..+ ++|++|+|++|. |+..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444444444432212223444444455554442 332111222221 245555555543 442111234445555
Q ss_pred ceeeccCC
Q 007455 169 HYLNLSTN 176 (603)
Q Consensus 169 ~~l~l~~N 176 (603)
+.|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.59 E-value=9.6e-06 Score=72.96 Aligned_cols=86 Identities=10% Similarity=0.082 Sum_probs=65.7
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCC-CCCCCCCCcccc----CCCceEEecccc-CCCCCccccccccc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNS-LHGSIPNEITNC----TELRALYLRANY-LQGGIPANIGNLLF 143 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 143 (603)
-+|+.|||+++.++..--..+.++++|+.|+|++|. |+..--..+..+ ++|++|+|++|. |+..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999876544567889999999999985 653222224443 479999999984 87544456788999
Q ss_pred cceecccCCc-cC
Q 007455 144 LTILDLSSNS-LK 155 (603)
Q Consensus 144 L~~L~l~~N~-l~ 155 (603)
|+.|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999986 44
No 424
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.57 E-value=0.00018 Score=75.10 Aligned_cols=78 Identities=12% Similarity=0.117 Sum_probs=48.0
Q ss_pred CCeEEecCCCCCeEECCCCCeEEeecccccccCCCCcceeecc-cccccccCccccccC---CCCcccchHhHHHHHHHH
Q 007455 433 PKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVTTVV-AGTFGYLAPEYLQSG---RATEKSDVYSFGVLLLEL 508 (603)
Q Consensus 433 ~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~---~~~~~~Dv~slG~vl~el 508 (603)
+.++|||++|.||+++.++ +.++||+.+..-... ....... .-...|.+|+..... ......++......+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 4799999999999999876 999999988753211 0000000 011346666654311 112235566788888888
Q ss_pred HhCC
Q 007455 509 VTGK 512 (603)
Q Consensus 509 ltg~ 512 (603)
+++.
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7753
No 425
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.51 E-value=0.00031 Score=70.22 Aligned_cols=158 Identities=12% Similarity=0.087 Sum_probs=87.7
Q ss_pred ChHHHHHHhhCCCCC-----CeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCe--eeecce
Q 007455 302 PSCEIIEKLEALDEE-----DVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHIN--LVNLRG 374 (603)
Q Consensus 302 ~~~~~~~~~~~~~~~-----~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~ 374 (603)
+..++......|... +.|+.|....+|+....++ .+++|...... ....+..|+.+++.+.... +.+++.
T Consensus 8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~ 84 (322)
T 2ppq_A 8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLP 84 (322)
T ss_dssp CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence 344555555666553 3466788899999987654 78899876521 2234667888887774222 333332
Q ss_pred e------eecCCccEEEEEecCCCCcccc--------------cccc----CCCC----ccCCHHHHHH-----------
Q 007455 375 Y------CRLPATKLLIYDYLSMGSLDDF--------------LHEH----GEGQ----QLLNWSARLK----------- 415 (603)
Q Consensus 375 ~------~~~~~~~~lv~e~~~~gsL~~~--------------l~~~----~~~~----~~l~~~~~~~----------- 415 (603)
. ....+..+++++|++|..+... ++.. .... ....|.....
T Consensus 85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 164 (322)
T 2ppq_A 85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 164 (322)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence 1 1223556899999998765321 1110 0000 0011222110
Q ss_pred -HHHHHHHHHHHHHhC----CCCCeEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 416 -IALGSARGLAYLHHD----CCPKIIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 416 -i~~~i~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
+...+.+.++.++.. ...+++|+|+.+.||++++++.+.|+||+.+.
T Consensus 165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011134445555532 12479999999999999987656899999775
No 426
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.38 E-value=0.00066 Score=67.23 Aligned_cols=72 Identities=14% Similarity=0.124 Sum_probs=45.1
Q ss_pred CCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCee-eecceeeecCCccEEEEEec-CCCC
Q 007455 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINL-VNLRGYCRLPATKLLIYDYL-SMGS 393 (603)
Q Consensus 316 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~gs 393 (603)
.+.|+.|....+|+. +.+++|......... ....+|+.+++.+....+ .+++++ .++.-++++||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 678999999999998 568888775432111 113568877777643223 344443 344567899999 6655
Q ss_pred cc
Q 007455 394 LD 395 (603)
Q Consensus 394 L~ 395 (603)
+.
T Consensus 95 l~ 96 (301)
T 3dxq_A 95 MS 96 (301)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 427
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.27 E-value=0.00095 Score=68.39 Aligned_cols=127 Identities=15% Similarity=0.157 Sum_probs=90.9
Q ss_pred cEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceeccc
Q 007455 71 RVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLS 150 (603)
Q Consensus 71 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 150 (603)
.++.+.+..+ +..+...+|.+..+|+.+.+..+ ++..-..+|.++.+|+.+.+..+ ++..-...|.++++|+.+.+.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 3555555433 45555567778888888888766 55344567888888888888655 553445678888999999998
Q ss_pred CCccCCCCCCCCccccccceeeccCCcCcccCC-CCccccccCcccccCCcc
Q 007455 151 SNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIP-DFGALSAFGNKSFIGNLD 201 (603)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~~l~~l~~~~n~~ 201 (603)
+|.++..-..+|.++.+|+.+.|.++ ++.+.. .|..+.+|+.+.+..++.
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~v~ 345 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKSIT 345 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTTCC
T ss_pred ccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCccC
Confidence 88888555678888899999998755 665544 377778888888877654
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.25 E-value=0.00039 Score=59.43 Aligned_cols=56 Identities=20% Similarity=0.167 Sum_probs=36.3
Q ss_pred EEEcCCCCcc-cccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCC
Q 007455 74 SINLPYMQLG-GIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQ 131 (603)
Q Consensus 74 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 131 (603)
.++.++++|+ ..+|..+. ++|+.|+|++|+|+..-++.|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666777776 23554332 36777788888877444455677777777777777664
No 429
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.24 E-value=0.0036 Score=62.58 Aligned_cols=157 Identities=13% Similarity=0.094 Sum_probs=88.7
Q ss_pred hHHHHHHhhCCCC-----CCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCC--eeeeccee
Q 007455 303 SCEIIEKLEALDE-----EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHI--NLVNLRGY 375 (603)
Q Consensus 303 ~~~~~~~~~~~~~-----~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~ 375 (603)
...+......|.+ ...++ |....||+....+++.+++|...... .....+..|..+++.+... .+++++..
T Consensus 13 ~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~ 90 (328)
T 1zyl_A 13 PDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF 90 (328)
T ss_dssp HHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB
T ss_pred HHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec
Confidence 3445455444433 23466 88889999887776679999875332 2345677888888877422 24444443
Q ss_pred -----eecCCccEEEEEecCCCCcccc--------------ccc----cCC-CCccCCHHHH----HHH-----------
Q 007455 376 -----CRLPATKLLIYDYLSMGSLDDF--------------LHE----HGE-GQQLLNWSAR----LKI----------- 416 (603)
Q Consensus 376 -----~~~~~~~~lv~e~~~~gsL~~~--------------l~~----~~~-~~~~l~~~~~----~~i----------- 416 (603)
....+..+++|+|++|..+... ++. ... .....++... ..+
T Consensus 91 ~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 170 (328)
T 1zyl_A 91 NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGL 170 (328)
T ss_dssp TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTT
T ss_pred CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHH
Confidence 1224455789999998654310 000 000 0111222111 000
Q ss_pred ----HHHHHHHHHHHHhC----CCCCeEEecCCCCCeEECCCCCeEEeecccccc
Q 007455 417 ----ALGSARGLAYLHHD----CCPKIIHRDIKSSNILLDENLEPHVSDFGLAKL 463 (603)
Q Consensus 417 ----~~~i~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~ 463 (603)
...+.+.+..+... ....++|||+++.||+++ + .+.|+||+.+..
T Consensus 171 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 171 KAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 01111223333221 224689999999999999 4 899999987754
No 430
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.23 E-value=0.00051 Score=71.70 Aligned_cols=73 Identities=11% Similarity=0.114 Sum_probs=49.5
Q ss_pred CeeeecCCeEEEEEEECC--------CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCee-eecceeeecCCccEEEEE
Q 007455 317 DVVGSGGFGTVYRMVMND--------CGTFAVKRIDRSREGSDQVFERELEILGSIKHINL-VNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 317 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e 387 (603)
+.|+.|....+|++...+ ++.+++|+.... .....+.+|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 467888899999998753 467889877432 222446689999888853333 455665432 38999
Q ss_pred ecCCCCcc
Q 007455 388 YLSMGSLD 395 (603)
Q Consensus 388 ~~~~gsL~ 395 (603)
|++|.++.
T Consensus 153 ~l~G~~l~ 160 (429)
T 1nw1_A 153 YIPSRPLS 160 (429)
T ss_dssp CCCEEECC
T ss_pred EeCCcccC
Confidence 99875553
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.19 E-value=1.6e-05 Score=72.97 Aligned_cols=83 Identities=11% Similarity=0.217 Sum_probs=42.9
Q ss_pred CcEEEEEcCCC-Cccc----ccCCCccCCCCcceEEeccCCCCC----CCCCCccccCCCceEEeccccCCCC----Ccc
Q 007455 70 QRVRSINLPYM-QLGG----IISPSIGRLDKLQRLALHQNSLHG----SIPNEITNCTELRALYLRANYLQGG----IPA 136 (603)
Q Consensus 70 ~~l~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~ 136 (603)
..++.|+|++| +|.. .+.+++..=+.|+.|+|++|+|.. .+...+..-+.|+.|+|++|+|+.. +-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 45667777664 5542 133344445666677777766652 1222233445666666666666521 112
Q ss_pred ccccccccceecccCC
Q 007455 137 NIGNLLFLTILDLSSN 152 (603)
Q Consensus 137 ~~~~l~~L~~L~l~~N 152 (603)
.+..-+.|++|+|++|
T Consensus 121 aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTTTCCCSEEECCCC
T ss_pred HHhhCCceeEEECCCC
Confidence 2333344666666544
No 432
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.15 E-value=0.001 Score=68.69 Aligned_cols=125 Identities=14% Similarity=0.132 Sum_probs=63.1
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
.+|+.+.|.+ .++.+-..+|.++++|+.++|.+| ++..-..+|.++++|+.+.+..+- ...-...|.++..+.....
T Consensus 71 ~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l-~~i~~~aF~~~~~~~~~~~ 147 (394)
T 4fs7_A 71 RKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLML-KSIGVEAFKGCDFKEITIP 147 (394)
T ss_dssp TTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTC-CEECTTTTTTCCCSEEECC
T ss_pred CCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCce-eeecceeeecccccccccC
Confidence 4677777764 366666677777778888777654 442334557777777776665442 2122223333322222222
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCC-CCccccccCcccccCCc
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIP-DFGALSAFGNKSFIGNL 200 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~~l~~l~~~~n~ 200 (603)
.+... .-..+|.++++|+.+.+.++..+ +.. .|..+.+|+.+.+..|+
T Consensus 148 ~~~~~--i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~~ 196 (394)
T 4fs7_A 148 EGVTV--IGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRNL 196 (394)
T ss_dssp TTCCE--ECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTTC
T ss_pred ccccc--cchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCCc
Confidence 11111 11234555555655555544322 222 24445555555555544
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.15 E-value=0.0017 Score=65.19 Aligned_cols=142 Identities=13% Similarity=0.085 Sum_probs=72.0
Q ss_pred CeeeecCCeE-EEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCC--CeeeecceeeecCCccEEEEEecCCCC
Q 007455 317 DVVGSGGFGT-VYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKH--INLVNLRGYCRLPATKLLIYDYLSMGS 393 (603)
Q Consensus 317 ~~ig~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gs 393 (603)
+.|+.|.... +|+....+++.+++|....... ..+..|+.+++.+.. -.+.+++.+.. ..-+++||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~--~~g~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEH--ARGLLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEET--TTTEEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecC--CCCEEEEeeCCCcc
Confidence 3455555444 6677654467787776543221 224567777776642 23445555532 23378999998766
Q ss_pred ccccccccCC----------------------CCccCCHHHHH-------H-------------HHHHHHHHHHHHHh--
Q 007455 394 LDDFLHEHGE----------------------GQQLLNWSARL-------K-------------IALGSARGLAYLHH-- 429 (603)
Q Consensus 394 L~~~l~~~~~----------------------~~~~l~~~~~~-------~-------------i~~~i~~~L~~LH~-- 429 (603)
+.+++..... ....++..... . ....+...+..+..
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 6543321100 00001111000 0 00111122222211
Q ss_pred -CCCCCeEEecCCCCCeEECCC----CCeEEeecccccc
Q 007455 430 -DCCPKIIHRDIKSSNILLDEN----LEPHVSDFGLAKL 463 (603)
Q Consensus 430 -~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfG~~~~ 463 (603)
...+.++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123479999999999999875 6799999998865
No 434
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.08 E-value=0.00076 Score=69.62 Aligned_cols=116 Identities=10% Similarity=0.199 Sum_probs=87.8
Q ss_pred cccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCCccCCCCCCC
Q 007455 82 LGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSS 161 (603)
Q Consensus 82 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 161 (603)
++.+-..+|.+.++|+.+.+.++..+ .-..+|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++..-..+
T Consensus 253 v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 329 (394)
T 4gt6_A 253 VARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDA 329 (394)
T ss_dssp EEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTT
T ss_pred ceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhH
Confidence 44444567888899999999876654 556778899999999996 4566455667889999999999865 55355678
Q ss_pred CccccccceeeccCCcCcccCCC-CccccccCcccccCCcc
Q 007455 162 LGRLTHLHYLNLSTNFFSGEIPD-FGALSAFGNKSFIGNLD 201 (603)
Q Consensus 162 ~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~~~n~~ 201 (603)
|.++++|+.+.+.++ ++.+... |..+.+|+.+.+.+|..
T Consensus 330 F~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 330 FAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred hhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 999999999999755 6655443 78888898888888753
No 435
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.06 E-value=0.00047 Score=71.16 Aligned_cols=124 Identities=12% Similarity=0.112 Sum_probs=86.9
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
..++.+.+.++- ..+-..+|.+.++|+.+.+. +.++..-..+|.++++|+.++|..| ++..-...|.+|++|+.+.|
T Consensus 265 ~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSV-VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTC-CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEeccccc-ceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 356677776543 34556788999999999996 5566345567999999999999865 66455678999999999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCcccCCCCccccccCcccccCC
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPDFGALSAFGNKSFIGN 199 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n 199 (603)
..+ ++..-..+|.++++|+.+++.+|.... ..+....+|+.+.+..|
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRSQW--NAISTDSGLQNLPVAPG 388 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHHHH--HTCBCCCCC--------
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCceeeh--hhhhccCCCCEEEeCCC
Confidence 765 663445689999999999999886542 23444556666655443
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.05 E-value=0.0017 Score=66.30 Aligned_cols=142 Identities=14% Similarity=0.073 Sum_probs=80.9
Q ss_pred CeeeecCCeEEEEEEECC--------CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCe-eeecceeeecCCccEEEEE
Q 007455 317 DVVGSGGFGTVYRMVMND--------CGTFAVKRIDRSREGSDQVFERELEILGSIKHIN-LVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 317 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e 387 (603)
+.|..|-...+|+....+ ++.+++|+.... ......+.+|.++++.+.-.. ..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 567778888999988642 467888875332 223445678999998884222 3455665543 38999
Q ss_pred ecCCCCcccc-cc----------------ccC-CCCccCC--HHHHHHHHHHHHH-------------------HHHHH-
Q 007455 388 YLSMGSLDDF-LH----------------EHG-EGQQLLN--WSARLKIALGSAR-------------------GLAYL- 427 (603)
Q Consensus 388 ~~~~gsL~~~-l~----------------~~~-~~~~~l~--~~~~~~i~~~i~~-------------------~L~~L- 427 (603)
|++|.+|..- +. ... ....... +.+..++..++.. .+..|
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998766421 11 000 0011122 3333334433211 12232
Q ss_pred ---HhC-CCCCeEEecCCCCCeEECCC----CCeEEeecccccc
Q 007455 428 ---HHD-CCPKIIHRDIKSSNILLDEN----LEPHVSDFGLAKL 463 (603)
Q Consensus 428 ---H~~-~~~~ivH~Dlkp~NIll~~~----~~~kl~DfG~~~~ 463 (603)
... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 222 12368999999999999876 7899999998764
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.04 E-value=0.00089 Score=57.16 Aligned_cols=57 Identities=21% Similarity=0.274 Sum_probs=47.7
Q ss_pred ceEEeccCCCC-CCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCCccC
Q 007455 97 QRLALHQNSLH-GSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSNSLK 155 (603)
Q Consensus 97 ~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 155 (603)
..++.++++++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 37899999996 46776544 47999999999999666677899999999999999875
No 438
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.96 E-value=0.0015 Score=67.35 Aligned_cols=85 Identities=14% Similarity=0.094 Sum_probs=49.3
Q ss_pred CccccCCCceEEeccccCCCCCccccccccccceecccCCccCCCCCCCCccccccceeeccCCcCcccCCC-Ccccccc
Q 007455 113 EITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGEIPD-FGALSAF 191 (603)
Q Consensus 113 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l 191 (603)
.|..+.+|+.+.+.++ ++..-...|.++++|+.++|.++ ++..-..+|.++++|+.+++..| ++.+... |..+.+|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTC
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCC
Confidence 3555666666666544 44233455666777777777543 54333456666777777777655 5544332 6666666
Q ss_pred CcccccCCc
Q 007455 192 GNKSFIGNL 200 (603)
Q Consensus 192 ~~l~~~~n~ 200 (603)
+.+.+..++
T Consensus 369 ~~i~lp~~~ 377 (394)
T 4fs7_A 369 KKVELPKRL 377 (394)
T ss_dssp CEEEEEGGG
T ss_pred CEEEECCCC
Confidence 666665554
No 439
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.92 E-value=0.0039 Score=62.81 Aligned_cols=67 Identities=12% Similarity=0.119 Sum_probs=43.0
Q ss_pred ecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCC---CCeeeeccee------eecCCccEEEEEecCC
Q 007455 321 SGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIK---HINLVNLRGY------CRLPATKLLIYDYLSM 391 (603)
Q Consensus 321 ~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~------~~~~~~~~lv~e~~~~ 391 (603)
.|....||+....++ .+++|+...... .+|+.+++.+. -|++.+++.. ....+..+++|+|++|
T Consensus 33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 33 ADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp SCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred CccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 333679999987775 899998755432 34566665553 2224454432 2334667899999998
Q ss_pred CCc
Q 007455 392 GSL 394 (603)
Q Consensus 392 gsL 394 (603)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 766
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.88 E-value=0.0033 Score=65.95 Aligned_cols=74 Identities=11% Similarity=0.100 Sum_probs=47.4
Q ss_pred CeeeecCCeEEEEEEECC-CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCee-eecceeeecCCccEEEEEecCCCCc
Q 007455 317 DVVGSGGFGTVYRMVMND-CGTFAVKRIDRSREGSDQVFERELEILGSIKHINL-VNLRGYCRLPATKLLIYDYLSMGSL 394 (603)
Q Consensus 317 ~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gsL 394 (603)
+.|+.|-...+|+....+ ++.+++|+......... ...+|..+++.+...++ .++++.+. + ..|+||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 568889899999998875 46788887643221111 12578888888864444 45666652 2 359999998665
Q ss_pred c
Q 007455 395 D 395 (603)
Q Consensus 395 ~ 395 (603)
.
T Consensus 189 ~ 189 (458)
T 2qg7_A 189 S 189 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.87 E-value=0.0014 Score=67.03 Aligned_cols=108 Identities=13% Similarity=0.121 Sum_probs=87.0
Q ss_pred CcEEEEEcCCCCcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecc
Q 007455 70 QRVRSINLPYMQLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDL 149 (603)
Q Consensus 70 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 149 (603)
..++.+.+..+ ++.+-..+|.+..+|+.+.+..+ +...-...|.++++|+.+.+.+|.++..-...|.++.+|+.+.|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 46788888765 77777788999999999999765 55344567999999999999999998556678999999999999
Q ss_pred cCCccCCCCCCCCccccccceeeccCCcCccc
Q 007455 150 SSNSLKGAIPSSLGRLTHLHYLNLSTNFFSGE 181 (603)
Q Consensus 150 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 181 (603)
..+ ++..-..+|.++++|+.+.+..| ++.+
T Consensus 318 p~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I 347 (379)
T 4h09_A 318 PTA-LKTIQVYAFKNCKALSTISYPKS-ITLI 347 (379)
T ss_dssp CTT-CCEECTTTTTTCTTCCCCCCCTT-CCEE
T ss_pred Ccc-ccEEHHHHhhCCCCCCEEEECCc-cCEE
Confidence 865 66345568999999999998655 5433
No 442
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.82 E-value=0.0033 Score=57.90 Aligned_cols=102 Identities=15% Similarity=0.092 Sum_probs=66.2
Q ss_pred CccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCCeEECCCCCeEEeecccccccCCCCccee
Q 007455 393 SLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSNILLDENLEPHVSDFGLAKLLVDEEAHVT 472 (603)
Q Consensus 393 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~~~~~~~~~~~~~ 472 (603)
||.+.++..+ +++++.++|.++.|.+.+|.-.-.... . ..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~---~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 34 SLEEILRLYN---QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cHHHHHHHcC---CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc----------
Confidence 7888887654 459999999999999999877632110 1 1223346889999999988764 1110
Q ss_pred ecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCC
Q 007455 473 TVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRP 514 (603)
Q Consensus 473 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p 514 (603)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123467888764 3456788999999999999975555
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.75 E-value=0.0026 Score=64.87 Aligned_cols=73 Identities=11% Similarity=0.066 Sum_probs=43.0
Q ss_pred CeeeecCCeEEEEEEECC---------CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCe-eeecceeeecCCccEEEE
Q 007455 317 DVVGSGGFGTVYRMVMND---------CGTFAVKRIDRSREGSDQVFERELEILGSIKHIN-LVNLRGYCRLPATKLLIY 386 (603)
Q Consensus 317 ~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 386 (603)
+.|+.|....+|+....+ ++.+++|........ ......|.++++.+...+ ..++++.. .-++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec----CCcEEE
Confidence 457788888999998764 257888876432211 112367888888775333 33555443 237899
Q ss_pred EecCCCCc
Q 007455 387 DYLSMGSL 394 (603)
Q Consensus 387 e~~~~gsL 394 (603)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99998654
No 444
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.48 E-value=0.00034 Score=64.01 Aligned_cols=89 Identities=13% Similarity=0.105 Sum_probs=64.1
Q ss_pred CccCCCCcceEEeccC-CCCC----CCCCCccccCCCceEEeccccCCC----CCccccccccccceecccCCccCCC--
Q 007455 89 SIGRLDKLQRLALHQN-SLHG----SIPNEITNCTELRALYLRANYLQG----GIPANIGNLLFLTILDLSSNSLKGA-- 157 (603)
Q Consensus 89 ~~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~-- 157 (603)
.+.+-+.|++|+|++| +|.. .+-+.+..-+.|+.|+|++|+|.. .+.+.+..-+.|+.|+|++|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455678999999986 7752 133445566889999999999983 2344455667899999999999842
Q ss_pred --CCCCCccccccceeeccCCc
Q 007455 158 --IPSSLGRLTHLHYLNLSTNF 177 (603)
Q Consensus 158 --~p~~~~~l~~L~~l~l~~N~ 177 (603)
+-+++..-+.|+.|+|++|.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHhhCCceeEEECCCCc
Confidence 23345556779999998763
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.05 E-value=0.011 Score=60.67 Aligned_cols=143 Identities=15% Similarity=0.093 Sum_probs=79.9
Q ss_pred CeeeecCCeEEEEEEECC--------CCEEEEEEeCCCCCC----------h--------HHHHHHHHHHHhhCC-CCee
Q 007455 317 DVVGSGGFGTVYRMVMND--------CGTFAVKRIDRSREG----------S--------DQVFERELEILGSIK-HINL 369 (603)
Q Consensus 317 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~----------~--------~~~~~~E~~~l~~l~-h~ni 369 (603)
+.|..|-...+|++...+ ...|.++..-...+. . .+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456677788899887653 256888876332211 0 112235888888875 3334
Q ss_pred eecceeeecCCccEEEEEecCCCCcccc-cc----------------ccC-CCCccCC--HHHHHHHHHHHH--------
Q 007455 370 VNLRGYCRLPATKLLIYDYLSMGSLDDF-LH----------------EHG-EGQQLLN--WSARLKIALGSA-------- 421 (603)
Q Consensus 370 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~----------------~~~-~~~~~l~--~~~~~~i~~~i~-------- 421 (603)
.++++++.. .+|+||++|.+|..- +. ... .-..... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 566666542 289999997666321 10 000 0011122 222222332221
Q ss_pred --------------HHH----HHHHhC-CCCCeEEecCCCCCeEECCC------CCeEEeecccccc
Q 007455 422 --------------RGL----AYLHHD-CCPKIIHRDIKSSNILLDEN------LEPHVSDFGLAKL 463 (603)
Q Consensus 422 --------------~~L----~~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~DfG~~~~ 463 (603)
.-+ .+|... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223222 22368999999999999887 7899999997753
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.85 E-value=0.13 Score=53.10 Aligned_cols=74 Identities=12% Similarity=0.098 Sum_probs=47.3
Q ss_pred CeeeecCCeEEEEEEECC--------CCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCe-eeecceeeecCCccEEEEE
Q 007455 317 DVVGSGGFGTVYRMVMND--------CGTFAVKRIDRSREGSDQVFERELEILGSIKHIN-LVNLRGYCRLPATKLLIYD 387 (603)
Q Consensus 317 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e 387 (603)
+.+..|-...+|+....+ ++.+++|+........ -...+|..+++.+...+ ..++++.+ .-+.|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-YDSKVELDVFRYLSNINIAPNIIADF----PEGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-CCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-cCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEEE
Confidence 467778889999998763 4678888754322111 12357888888774222 33445433 2378999
Q ss_pred ecCCCCcc
Q 007455 388 YLSMGSLD 395 (603)
Q Consensus 388 ~~~~gsL~ 395 (603)
|++|.+|.
T Consensus 151 fI~G~~l~ 158 (424)
T 3mes_A 151 FIDGEPLT 158 (424)
T ss_dssp CCCSEECC
T ss_pred EeCCccCC
Confidence 99997653
No 447
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=92.09 E-value=0.18 Score=32.08 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=16.3
Q ss_pred cccccchhhhhHhHHHHHHHHHHHHHHhh
Q 007455 238 HYMKGVLIGAMSTMGLALVVLLAFLWICL 266 (603)
Q Consensus 238 ~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 266 (603)
..+.+.+.|+++++.+.+++++++.++++
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceeeeehHHHHHHHHHHHHHHHHe
Confidence 34556677777766555554444444443
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.06 E-value=0.19 Score=51.58 Aligned_cols=30 Identities=30% Similarity=0.434 Sum_probs=25.3
Q ss_pred CeEEecCCCCCeEE------CCCCCeEEeecccccc
Q 007455 434 KIIHRDIKSSNILL------DENLEPHVSDFGLAKL 463 (603)
Q Consensus 434 ~ivH~Dlkp~NIll------~~~~~~kl~DfG~~~~ 463 (603)
.++|+|+.+.||++ +++..+.++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567799999998864
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=89.98 E-value=0.38 Score=31.59 Aligned_cols=27 Identities=11% Similarity=0.042 Sum_probs=11.4
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhhhhcc
Q 007455 244 LIGAMSTMGLALVVLLAFLWICLLSKK 270 (603)
Q Consensus 244 vi~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (603)
+++.++++.+++++++...|+++++|+
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence 444444444433333333344444443
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.64 E-value=0.48 Score=31.16 Aligned_cols=27 Identities=15% Similarity=0.116 Sum_probs=10.8
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhhhhcc
Q 007455 244 LIGAMSTMGLALVVLLAFLWICLLSKK 270 (603)
Q Consensus 244 vi~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (603)
+++.++++.+++++++..+|+++++|+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 444444433333333333344443333
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=83.53 E-value=1.5 Score=40.08 Aligned_cols=117 Identities=12% Similarity=0.128 Sum_probs=76.8
Q ss_pred CCCeeeecceeeecCCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCCC
Q 007455 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCPKIIHRDIKSSN 444 (603)
Q Consensus 365 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 444 (603)
.||+.+.. .+-...+.+.+.|+.-+ +..++-.-. ..+...+++++..|+....++++. +|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~ik-----~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNIK-----SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGGG-----GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHHH-----hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 57877755 44555555555555433 333332211 178899999999999877666554 788899999
Q ss_pred eEECCCCCeEEeecccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCc
Q 007455 445 ILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDP 517 (603)
Q Consensus 445 Ill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~ 517 (603)
|+++.++.+++.=.|+-..+ +|. ..+...=.-.+=+++..+++++..|+.
T Consensus 110 L~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp EEECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999999877754332 221 111122233566788899999988764
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=82.54 E-value=1.5 Score=28.73 Aligned_cols=7 Identities=29% Similarity=0.434 Sum_probs=3.6
Q ss_pred hhhhhHh
Q 007455 244 LIGAMST 250 (603)
Q Consensus 244 vi~~~~~ 250 (603)
+++.+++
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 4555554
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=81.39 E-value=2.4 Score=38.90 Aligned_cols=116 Identities=13% Similarity=0.107 Sum_probs=74.1
Q ss_pred CCCeeeecceeeecCCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHH-HHHhCCCCCeEEecCCCC
Q 007455 365 KHINLVNLRGYCRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLA-YLHHDCCPKIIHRDIKSS 443 (603)
Q Consensus 365 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlkp~ 443 (603)
.||++ -..+-.+++.+.+.|+.-+++.=...++. ++...+++++..++.... +++. -+|=-+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-------~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-------TTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-------SCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-------cCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCc
Confidence 57777 33344566666666665433222222222 788899999999887666 5544 478889999
Q ss_pred CeEECCCCCeEEeecccccccCCCCcceeecccccccccCccccccCCCCcccchHhHHHHHHHHHhCCCCCCc
Q 007455 444 NILLDENLEPHVSDFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDP 517 (603)
Q Consensus 444 NIll~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~p~~~ 517 (603)
||++|.++.+++.-.|+-..+ +|.-+ +..-=.-.+=+++..++.++..|+.
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l------------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL------------------PPDEW-----DDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred eEEEeCCCcEEEEEcCCcccC------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999999877754332 22211 1111123566788888888887753
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=75.08 E-value=0.35 Score=50.57 Aligned_cols=60 Identities=10% Similarity=0.020 Sum_probs=17.3
Q ss_pred CCCeeeecCCeEEEEEEECCC-CEEEE------EEeCCCC--CChHHHHHHHHHHHhhCCCCeeeecceeee
Q 007455 315 EEDVVGSGGFGTVYRMVMNDC-GTFAV------KRIDRSR--EGSDQVFERELEILGSIKHINLVNLRGYCR 377 (603)
Q Consensus 315 ~~~~ig~G~~g~Vy~~~~~~~-~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 377 (603)
+.+.|| ||.||+|.+... .+||| |..+... ......+.+|..+++.++|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345676 999999998753 46888 6654322 122235788999999999999999988754
No 455
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=62.96 E-value=10 Score=25.95 Aligned_cols=32 Identities=22% Similarity=0.159 Sum_probs=18.1
Q ss_pred cccchhhhhHhHHHHHHHHHHHHHHhhhhccc
Q 007455 240 MKGVLIGAMSTMGLALVVLLAFLWICLLSKKE 271 (603)
Q Consensus 240 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (603)
..++++++++++.+++++++.++|-+-..||+
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK~GFFKR~ 39 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWKIGFFKRP 39 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 34666666666655555555555655444443
No 456
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=62.10 E-value=8.6 Score=26.40 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=18.6
Q ss_pred cccchhhhhHhHHHHHHHHHHHHHHhhhhcccc
Q 007455 240 MKGVLIGAMSTMGLALVVLLAFLWICLLSKKER 272 (603)
Q Consensus 240 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (603)
..++++++++++.+++++++.++|-+-..||++
T Consensus 11 p~wiIi~svl~GLllL~li~~~LwK~GFFkR~~ 43 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNR 43 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 446666666665555555555666555455443
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=53.71 E-value=24 Score=27.68 Aligned_cols=46 Identities=15% Similarity=0.240 Sum_probs=24.8
Q ss_pred CcccccCCCccCCCCcceEEeccCCCCCCCCCCccccCCCceEEecc
Q 007455 81 QLGGIISPSIGRLDKLQRLALHQNSLHGSIPNEITNCTELRALYLRA 127 (603)
Q Consensus 81 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 127 (603)
+++.+-..+|.+.++|+.+.|-.+ ++..-..+|.++++|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344444555666666666666553 3323344566666666665543
No 458
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=51.98 E-value=1e+02 Score=32.80 Aligned_cols=85 Identities=12% Similarity=0.087 Sum_probs=50.1
Q ss_pred eecceeeecCCccEEEEEecCCCCccccc----------cccCCCCc---cCCHHHHHHHHHHHH--HHHHHHHhCCCCC
Q 007455 370 VNLRGYCRLPATKLLIYDYLSMGSLDDFL----------HEHGEGQQ---LLNWSARLKIALGSA--RGLAYLHHDCCPK 434 (603)
Q Consensus 370 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l----------~~~~~~~~---~l~~~~~~~i~~~i~--~~L~~LH~~~~~~ 434 (603)
++.|.+........ +.|++++-++.+.+ .+..+... ...+..+..++..+| ..+.|+=.-
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 34455554444444 35777654444443 33221111 123445555555554 345666543
Q ss_pred eEEecCCCCCeEECCCCCeEEeeccccc
Q 007455 435 IIHRDIKSSNILLDENLEPHVSDFGLAK 462 (603)
Q Consensus 435 ivH~Dlkp~NIll~~~~~~kl~DfG~~~ 462 (603)
+|=.++|||++.+|++.=+|||.+.
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5778999999999999999999874
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=50.93 E-value=30 Score=27.10 Aligned_cols=47 Identities=15% Similarity=0.081 Sum_probs=27.5
Q ss_pred CCCCCCCCCccccCCCceEEeccccCCCCCccccccccccceecccCC
Q 007455 105 SLHGSIPNEITNCTELRALYLRANYLQGGIPANIGNLLFLTILDLSSN 152 (603)
Q Consensus 105 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 152 (603)
.++.+-..+|.++++|+.+.|..+ ++..-...|.+|.+|+.+.+.+.
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 444344456777777777777654 33244555666666666666543
No 460
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=47.57 E-value=25 Score=22.69 Aligned_cols=31 Identities=16% Similarity=0.099 Sum_probs=15.7
Q ss_pred cccchhhhhHhHHHHHHHHHHHHHHhhhhcc
Q 007455 240 MKGVLIGAMSTMGLALVVLLAFLWICLLSKK 270 (603)
Q Consensus 240 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (603)
..+++++++.++.+++.++..++|-+-..||
T Consensus 9 p~wiIi~s~l~GLllL~li~~~LwK~GFFkR 39 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAMWKVGFFKR 39 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccC
Confidence 3455666655555555545555554444443
No 461
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=46.89 E-value=26 Score=24.85 Aligned_cols=15 Identities=13% Similarity=0.567 Sum_probs=6.4
Q ss_pred hcccccccchhhhhh
Q 007455 268 SKKERAVKRYTEVRK 282 (603)
Q Consensus 268 ~~~~~~~~~~~~~~~ 282 (603)
++++++.++..+++.
T Consensus 35 rhRrrqAeRMSQikr 49 (70)
T 2klu_A 35 RHRRRQAERMSQIKR 49 (70)
T ss_dssp SCCSSSCTTSSHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444443
No 462
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=40.92 E-value=92 Score=30.37 Aligned_cols=139 Identities=16% Similarity=0.148 Sum_probs=70.8
Q ss_pred CCeeeecCCeEEEEEEECCCCEEEEEEeCCCCCChHHHHHHHHHHHhhCCCCe--eeecce---------------e---
Q 007455 316 EDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHIN--LVNLRG---------------Y--- 375 (603)
Q Consensus 316 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~---------------~--- 375 (603)
.+..-.|..|.++-.. +++.++||.. .....+.+-.++...-.+.-|+ |+..-. .
T Consensus 74 I~~s~~Gstgvff~~t--d~~~~VVK~s---~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~ 148 (342)
T 1cja_A 74 IERSEKGTEGLFFVET--ESGVFIVKRS---TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRV 148 (342)
T ss_dssp EEECCSTTSCEEEEEE--SSCEEEEECC---TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCH
T ss_pred EEeccCCCCCeEEEEe--CCCEEEEeCc---HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHH
Confidence 3444556655554444 4678999944 1223344444444444455554 222110 0
Q ss_pred --eecCCccEEEEEecCCCCccccccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEE-ecCCCCCeEECCCC
Q 007455 376 --CRLPATKLLIYDYLSMGSLDDFLHEHGEGQQLLNWSARLKIALGSARGLAYLHHDCCP-KIIH-RDIKSSNILLDENL 451 (603)
Q Consensus 376 --~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH-~Dlkp~NIll~~~~ 451 (603)
.......+++|||.+|..|.+.-.... ...+.......+.. +-++.++..+++. +.+. .--.+.|||+++++
T Consensus 149 l~~l~~~~~~l~meyv~G~~L~e~~~~~~--~~~f~~~~~k~LG~--Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n 224 (342)
T 1cja_A 149 ITTLANQANILLMELVRGITLNKLTTTSA--PEVLTKSTMQQLGS--LMALDVIVNNSDRLPIAWTNEGNLDNIMLSERG 224 (342)
T ss_dssp HHHHTTCSEEEEEECCCEEESTTCCSSSH--HHHSCHHHHHHHHH--HHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBT
T ss_pred HHHhhcccceehhhhcCCCccccchhhhh--hhhcCHHHHHhhch--hheehhhhcCCccCcccccCCCChhheEEeCCC
Confidence 001224569999999877665433210 01123232222111 2245666665432 1222 22478899997755
Q ss_pred C-eEEeecccccc
Q 007455 452 E-PHVSDFGLAKL 463 (603)
Q Consensus 452 ~-~kl~DfG~~~~ 463 (603)
. +.++|-+.+..
T Consensus 225 ~~~~~IDhn~af~ 237 (342)
T 1cja_A 225 ATVVPIDSKIIPL 237 (342)
T ss_dssp TCEEECSCCCCCC
T ss_pred CeEEEEcCCcccc
Confidence 4 88999988854
No 463
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=27.44 E-value=60 Score=19.70 Aligned_cols=19 Identities=26% Similarity=0.293 Sum_probs=9.4
Q ss_pred ccchhhhhHhHHHHHHHHH
Q 007455 241 KGVLIGAMSTMGLALVVLL 259 (603)
Q Consensus 241 ~~~vi~~~~~~~~~~~~~~ 259 (603)
.+.+.|.+++..++.++++
T Consensus 6 ~gaIaGIVvgdi~~t~~i~ 24 (33)
T 2l34_A 6 PGVLAGIVVGDLVLTVLIA 24 (33)
T ss_dssp THHHHHHHHHHHHHHHHHH
T ss_pred cceEEeEeHHHHHHHHHHH
Confidence 3455666655544444333
No 464
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=22.94 E-value=27 Score=18.34 Aligned_cols=9 Identities=33% Similarity=1.328 Sum_probs=6.7
Q ss_pred CCcccccee
Q 007455 56 SPCKWTGIS 64 (603)
Q Consensus 56 ~~c~w~gv~ 64 (603)
-.|+|.|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 459999864
No 465
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=22.10 E-value=88 Score=24.68 Aligned_cols=46 Identities=13% Similarity=0.135 Sum_probs=34.5
Q ss_pred chhhhcccCCCcCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHh
Q 007455 539 LEDVIDKRCADADMETVEAILEIAARCTDANPDDRPSMNQVLQLLE 584 (603)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~ 584 (603)
+.+.+..+.+....+.-..+.+.|..++..+|.++.|++++.+.|.
T Consensus 33 lPEfF~g~~~~ktpe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l~ 78 (104)
T 2fq3_A 33 LPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVS 78 (104)
T ss_dssp CGGGCCSSCTTSCHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHSC
T ss_pred ChHHhcCCCCCCCHHHHHHHHHHHHHHHHhCCceeeeHHHHHHHcc
Confidence 3344443333344566678999999999999999999999998774
Done!