Query 007456
Match_columns 603
No_of_seqs 189 out of 1360
Neff 4.7
Searched_HMMs 29240
Date Tue Mar 26 02:17:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007456.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007456hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 3E-204 1E-208 1647.3 39.2 540 31-601 2-542 (555)
2 1o0s_A NAD-ME, NAD-dependent m 100.0 4E-203 1E-207 1646.9 38.4 546 24-601 31-579 (605)
3 1pj3_A NAD-dependent malic enz 100.0 7E-203 2E-207 1641.1 39.6 543 30-601 3-547 (564)
4 3nv9_A Malic enzyme; rossmann 100.0 2E-122 6E-127 989.9 34.3 396 106-591 44-449 (487)
5 2a9f_A Putative malic enzyme ( 100.0 1E-113 5E-118 911.8 21.1 368 106-562 19-391 (398)
6 1vl6_A Malate oxidoreductase; 100.0 1E-107 4E-112 865.4 26.3 360 106-558 23-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 2.9E-86 9.9E-91 713.1 28.1 388 111-596 21-420 (439)
8 3gvp_A Adenosylhomocysteinase 98.7 4.9E-08 1.7E-12 105.4 13.2 169 243-457 112-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.7 2.5E-08 8.4E-13 107.8 10.6 129 289-459 173-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.3 9.3E-07 3.2E-11 94.1 9.4 227 155-447 25-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.7 0.00011 3.9E-09 79.8 11.4 128 289-458 209-346 (464)
12 3ond_A Adenosylhomocysteinase; 97.7 0.00011 3.6E-09 80.6 9.9 129 289-460 227-366 (488)
13 1l7d_A Nicotinamide nucleotide 97.1 0.0077 2.6E-07 63.3 15.2 238 155-446 18-296 (384)
14 4dio_A NAD(P) transhydrogenase 96.8 0.00043 1.5E-08 74.3 2.3 112 323-453 190-322 (405)
15 3d4o_A Dipicolinate synthase s 96.4 0.028 9.5E-07 56.6 12.9 141 279-457 107-255 (293)
16 3p2y_A Alanine dehydrogenase/p 96.2 0.003 1E-07 67.2 4.3 105 323-446 184-304 (381)
17 3k92_A NAD-GDH, NAD-specific g 95.6 0.15 5.1E-06 55.0 14.4 185 242-448 125-330 (424)
18 1a4i_A Methylenetetrahydrofola 95.5 0.02 6.8E-07 59.3 7.1 141 253-446 79-239 (301)
19 3tri_A Pyrroline-5-carboxylate 95.2 0.23 7.8E-06 49.7 13.5 122 323-478 3-127 (280)
20 3p2o_A Bifunctional protein fo 95.2 0.034 1.2E-06 57.1 7.4 158 208-447 61-236 (285)
21 3l07_A Bifunctional protein fo 95.1 0.034 1.2E-06 57.1 7.3 139 253-444 78-233 (285)
22 4fcc_A Glutamate dehydrogenase 95.1 0.87 3E-05 49.5 18.5 186 241-448 139-355 (450)
23 4a5o_A Bifunctional protein fo 95.0 0.04 1.4E-06 56.6 7.2 142 253-447 79-237 (286)
24 3r3j_A Glutamate dehydrogenase 95.0 0.89 3E-05 49.5 17.9 191 243-459 145-368 (456)
25 1b0a_A Protein (fold bifunctio 94.9 0.032 1.1E-06 57.4 6.3 141 253-446 77-233 (288)
26 3aoe_E Glutamate dehydrogenase 94.8 0.31 1.1E-05 52.5 13.9 181 243-448 123-324 (419)
27 3aog_A Glutamate dehydrogenase 94.6 0.38 1.3E-05 52.1 13.9 182 243-448 140-345 (440)
28 3ngx_A Bifunctional protein fo 94.5 0.052 1.8E-06 55.5 6.7 137 253-444 70-222 (276)
29 2yfq_A Padgh, NAD-GDH, NAD-spe 94.5 0.4 1.4E-05 51.7 13.8 183 243-447 116-326 (421)
30 4a26_A Putative C-1-tetrahydro 94.3 0.059 2E-06 55.7 6.6 139 253-444 81-239 (300)
31 1edz_A 5,10-methylenetetrahydr 93.8 0.045 1.5E-06 57.0 4.5 115 302-447 150-278 (320)
32 1v8b_A Adenosylhomocysteinase; 93.5 0.33 1.1E-05 53.1 11.0 123 295-459 235-357 (479)
33 2c2x_A Methylenetetrahydrofola 93.2 0.1 3.4E-06 53.6 5.9 158 208-446 60-234 (281)
34 2rir_A Dipicolinate synthase, 93.1 0.21 7.2E-06 50.3 8.1 100 311-445 148-247 (300)
35 4e12_A Diketoreductase; oxidor 92.7 0.62 2.1E-05 46.3 10.7 32 324-367 5-36 (283)
36 2bma_A Glutamate dehydrogenase 92.6 1.2 4.1E-05 48.7 13.7 181 244-448 159-373 (470)
37 1c1d_A L-phenylalanine dehydro 92.6 0.38 1.3E-05 50.6 9.4 166 244-448 91-266 (355)
38 2tmg_A Protein (glutamate dehy 92.5 1.8 6.1E-05 46.6 14.7 183 244-448 115-320 (415)
39 1pjc_A Protein (L-alanine dehy 92.1 0.22 7.5E-06 51.7 6.9 100 321-446 165-269 (361)
40 1gpj_A Glutamyl-tRNA reductase 92.0 1.1 3.7E-05 47.3 12.1 137 277-447 129-269 (404)
41 2o4c_A Erythronate-4-phosphate 91.8 1.4 4.8E-05 46.7 12.7 223 263-539 56-292 (380)
42 3fbt_A Chorismate mutase and s 91.4 0.21 7.3E-06 50.8 5.7 99 252-367 47-155 (282)
43 3ado_A Lambda-crystallin; L-gu 91.4 1.3 4.5E-05 45.8 11.7 195 324-565 7-216 (319)
44 3jyo_A Quinate/shikimate dehyd 91.2 0.24 8.1E-06 50.2 5.8 142 252-418 51-204 (283)
45 3tnl_A Shikimate dehydrogenase 91.2 0.25 8.5E-06 51.1 6.0 50 304-367 138-187 (315)
46 1lu9_A Methylene tetrahydromet 91.0 1 3.5E-05 44.8 10.2 86 266-367 60-152 (287)
47 3t4e_A Quinate/shikimate dehyd 91.0 0.25 8.6E-06 51.0 5.8 49 305-367 133-181 (312)
48 3d64_A Adenosylhomocysteinase; 90.9 0.47 1.6E-05 52.1 8.2 100 312-448 269-368 (494)
49 4e21_A 6-phosphogluconate dehy 90.9 0.55 1.9E-05 49.1 8.4 95 324-447 23-118 (358)
50 3ce6_A Adenosylhomocysteinase; 90.7 1.4 4.8E-05 48.3 11.7 109 312-459 266-374 (494)
51 3o8q_A Shikimate 5-dehydrogena 90.7 0.24 8.1E-06 50.3 5.2 99 252-367 50-159 (281)
52 2dpo_A L-gulonate 3-dehydrogen 90.6 2.5 8.4E-05 43.4 12.8 129 324-478 7-152 (319)
53 3tum_A Shikimate dehydrogenase 90.6 0.28 9.7E-06 49.5 5.7 48 305-366 110-157 (269)
54 3u95_A Glycoside hydrolase, fa 90.4 0.18 6.2E-06 54.9 4.3 45 424-472 140-184 (477)
55 2zyd_A 6-phosphogluconate dehy 90.3 0.45 1.5E-05 51.6 7.3 102 323-448 15-117 (480)
56 2ekl_A D-3-phosphoglycerate de 90.2 3.3 0.00011 42.3 13.3 165 262-465 65-251 (313)
57 3pwz_A Shikimate dehydrogenase 90.0 0.25 8.5E-06 49.9 4.7 99 252-367 44-153 (272)
58 1pzg_A LDH, lactate dehydrogen 90.0 0.28 9.5E-06 50.6 5.1 126 324-470 10-157 (331)
59 3dtt_A NADP oxidoreductase; st 90.0 0.46 1.6E-05 46.3 6.4 106 321-447 17-127 (245)
60 3don_A Shikimate dehydrogenase 89.9 0.17 5.7E-06 51.4 3.3 109 305-447 102-214 (277)
61 3mw9_A GDH 1, glutamate dehydr 89.6 2.5 8.6E-05 46.5 12.4 185 242-447 135-352 (501)
62 3oet_A Erythronate-4-phosphate 89.4 1.7 5.7E-05 46.3 10.5 187 289-527 85-282 (381)
63 2gcg_A Glyoxylate reductase/hy 89.1 2.9 0.0001 42.8 11.9 147 264-446 75-248 (330)
64 3h8v_A Ubiquitin-like modifier 88.8 0.25 8.5E-06 50.7 3.7 36 321-367 34-69 (292)
65 3u62_A Shikimate dehydrogenase 88.8 0.44 1.5E-05 47.5 5.3 79 306-417 97-175 (253)
66 2egg_A AROE, shikimate 5-dehyd 88.6 0.44 1.5E-05 48.3 5.3 49 305-367 125-174 (297)
67 1mld_A Malate dehydrogenase; o 88.5 1.3 4.3E-05 45.3 8.6 102 325-448 2-121 (314)
68 1gtm_A Glutamate dehydrogenase 88.4 2.3 7.9E-05 45.6 11.0 112 244-370 115-249 (419)
69 1nyt_A Shikimate 5-dehydrogena 88.4 0.51 1.7E-05 46.9 5.5 49 304-367 103-151 (271)
70 1wwk_A Phosphoglycerate dehydr 88.3 3.8 0.00013 41.7 12.0 149 261-446 62-234 (307)
71 1x0v_A GPD-C, GPDH-C, glycerol 88.1 1.4 4.7E-05 44.6 8.7 114 324-448 9-128 (354)
72 1bgv_A Glutamate dehydrogenase 88.1 18 0.00062 39.2 17.8 186 244-448 136-351 (449)
73 3gt0_A Pyrroline-5-carboxylate 88.1 1.4 4.8E-05 42.7 8.3 122 324-478 3-126 (247)
74 3k5p_A D-3-phosphoglycerate de 88.0 5.9 0.0002 42.5 13.8 218 262-526 77-321 (416)
75 1obb_A Maltase, alpha-glucosid 88.0 0.17 5.7E-06 55.4 1.8 131 324-472 4-177 (480)
76 1txg_A Glycerol-3-phosphate de 88.0 0.95 3.3E-05 45.2 7.3 100 325-447 2-107 (335)
77 1p77_A Shikimate 5-dehydrogena 87.8 0.44 1.5E-05 47.4 4.6 49 304-367 103-151 (272)
78 3oj0_A Glutr, glutamyl-tRNA re 87.7 0.35 1.2E-05 42.9 3.5 91 324-447 22-113 (144)
79 1v9l_A Glutamate dehydrogenase 87.6 1.8 6E-05 46.7 9.5 181 244-448 116-326 (421)
80 2v6b_A L-LDH, L-lactate dehydr 87.6 0.32 1.1E-05 49.4 3.5 124 325-471 2-140 (304)
81 2izz_A Pyrroline-5-carboxylate 87.6 1.5 5E-05 44.5 8.4 101 324-449 23-123 (322)
82 2hk9_A Shikimate dehydrogenase 87.5 0.64 2.2E-05 46.2 5.6 82 305-417 114-195 (275)
83 3kkj_A Amine oxidase, flavin-c 87.1 0.33 1.1E-05 43.2 3.0 32 324-367 3-34 (336)
84 1x7d_A Ornithine cyclodeaminas 86.9 1.7 5.7E-05 45.3 8.6 118 305-455 116-238 (350)
85 1hyh_A L-hicdh, L-2-hydroxyiso 86.9 0.72 2.5E-05 46.5 5.7 107 324-449 2-127 (309)
86 1f0y_A HCDH, L-3-hydroxyacyl-C 86.7 0.43 1.5E-05 47.7 3.9 32 324-367 16-47 (302)
87 2p4q_A 6-phosphogluconate dehy 86.5 1.4 4.9E-05 48.0 8.1 101 324-448 11-113 (497)
88 2eez_A Alanine dehydrogenase; 86.5 1.1 3.7E-05 46.6 6.9 100 320-445 163-267 (369)
89 1s6y_A 6-phospho-beta-glucosid 86.5 0.19 6.6E-06 54.3 1.2 130 324-470 8-175 (450)
90 2rcy_A Pyrroline carboxylate r 86.4 3.5 0.00012 39.6 10.1 92 324-449 5-96 (262)
91 2j6i_A Formate dehydrogenase; 86.4 6.2 0.00021 41.2 12.6 171 261-468 80-279 (364)
92 1u8x_X Maltose-6'-phosphate gl 86.4 0.18 6.2E-06 54.9 1.0 130 324-470 29-194 (472)
93 2h78_A Hibadh, 3-hydroxyisobut 86.3 0.85 2.9E-05 45.3 5.8 32 324-367 4-35 (302)
94 1leh_A Leucine dehydrogenase; 86.3 1.3 4.4E-05 46.7 7.4 159 249-447 93-264 (364)
95 2ewd_A Lactate dehydrogenase,; 86.2 0.33 1.1E-05 49.3 2.8 107 324-449 5-126 (317)
96 3rui_A Ubiquitin-like modifier 86.0 0.32 1.1E-05 51.0 2.6 36 321-367 32-67 (340)
97 2iz1_A 6-phosphogluconate dehy 85.7 1.3 4.5E-05 47.7 7.3 101 324-448 6-107 (474)
98 1t2d_A LDH-P, L-lactate dehydr 85.3 0.33 1.1E-05 49.9 2.2 129 324-474 5-155 (322)
99 2pgd_A 6-phosphogluconate dehy 85.2 1.3 4.5E-05 47.8 7.0 101 324-448 3-105 (482)
100 3fef_A Putative glucosidase LP 85.0 2.2 7.4E-05 46.3 8.5 106 324-448 6-150 (450)
101 2hjr_A Malate dehydrogenase; m 84.7 0.34 1.2E-05 49.9 2.0 129 324-474 15-160 (328)
102 1sc6_A PGDH, D-3-phosphoglycer 84.7 12 0.00041 39.8 14.0 217 262-527 66-311 (404)
103 3ba1_A HPPR, hydroxyphenylpyru 84.5 4.4 0.00015 41.9 10.3 122 289-448 111-255 (333)
104 4gwg_A 6-phosphogluconate dehy 84.3 2.2 7.6E-05 46.5 8.3 102 324-448 5-107 (484)
105 1yj8_A Glycerol-3-phosphate de 84.3 1.4 4.9E-05 45.4 6.5 114 324-448 22-145 (375)
106 1mx3_A CTBP1, C-terminal bindi 84.2 20 0.00069 37.2 15.2 218 261-527 81-334 (347)
107 2vhw_A Alanine dehydrogenase; 84.1 1.3 4.3E-05 46.4 6.1 99 320-444 165-268 (377)
108 1bg6_A N-(1-D-carboxylethyl)-L 84.1 1.6 5.4E-05 43.9 6.6 100 324-445 5-110 (359)
109 4gsl_A Ubiquitin-like modifier 84.1 0.55 1.9E-05 52.9 3.5 34 324-368 327-360 (615)
110 3i83_A 2-dehydropantoate 2-red 83.9 0.95 3.2E-05 45.7 4.9 104 324-448 3-109 (320)
111 4dgs_A Dehydrogenase; structur 83.8 5 0.00017 41.7 10.4 138 289-466 117-278 (340)
112 3doj_A AT3G25530, dehydrogenas 83.8 1.5 5E-05 44.2 6.2 32 324-367 22-53 (310)
113 3d1l_A Putative NADP oxidoredu 83.6 0.86 2.9E-05 44.3 4.2 97 324-449 11-107 (266)
114 2i6t_A Ubiquitin-conjugating e 83.5 2.8 9.7E-05 42.7 8.2 121 324-471 15-151 (303)
115 2i99_A MU-crystallin homolog; 83.4 3.1 0.00011 42.2 8.5 116 305-459 122-241 (312)
116 3pef_A 6-phosphogluconate dehy 83.4 1.2 4.2E-05 43.9 5.4 32 324-367 2-33 (287)
117 1up7_A 6-phospho-beta-glucosid 83.3 1.2 4.1E-05 47.7 5.5 126 324-470 3-164 (417)
118 1jw9_B Molybdopterin biosynthe 83.3 0.54 1.9E-05 46.4 2.7 34 324-368 32-65 (249)
119 1ks9_A KPA reductase;, 2-dehyd 82.9 1.8 6.2E-05 41.9 6.2 100 325-448 2-101 (291)
120 1zud_1 Adenylyltransferase THI 82.7 0.53 1.8E-05 46.6 2.4 33 324-367 29-61 (251)
121 4g2n_A D-isomer specific 2-hyd 82.7 7 0.00024 40.7 11.0 193 289-527 118-336 (345)
122 3vh1_A Ubiquitin-like modifier 82.6 0.58 2E-05 52.6 2.9 37 317-367 324-360 (598)
123 1pgj_A 6PGDH, 6-PGDH, 6-phosph 82.5 1.4 4.9E-05 47.5 5.9 104 324-448 2-107 (478)
124 1y6j_A L-lactate dehydrogenase 82.3 4 0.00014 41.6 8.9 115 324-460 8-136 (318)
125 3gvi_A Malate dehydrogenase; N 82.2 0.75 2.6E-05 47.6 3.4 106 324-448 8-128 (324)
126 4fgw_A Glycerol-3-phosphate de 82.2 2.1 7.2E-05 45.6 6.9 94 324-432 35-139 (391)
127 1npy_A Hypothetical shikimate 82.0 1.3 4.3E-05 44.6 4.9 48 305-367 105-152 (271)
128 1b8p_A Protein (malate dehydro 82.0 1.5 5.1E-05 45.0 5.5 111 324-448 6-137 (329)
129 4hy3_A Phosphoglycerate oxidor 81.9 4.2 0.00014 42.8 9.0 184 298-527 133-339 (365)
130 3k96_A Glycerol-3-phosphate de 81.8 2.3 7.9E-05 44.2 6.9 105 324-448 30-137 (356)
131 2zqz_A L-LDH, L-lactate dehydr 81.8 1.6 5.5E-05 44.9 5.7 114 324-460 10-138 (326)
132 3pdu_A 3-hydroxyisobutyrate de 81.7 1.5 5E-05 43.4 5.2 32 324-367 2-33 (287)
133 1ez4_A Lactate dehydrogenase; 81.5 1.9 6.3E-05 44.3 6.0 114 324-460 6-134 (318)
134 1o6z_A MDH, malate dehydrogena 81.5 1.9 6.5E-05 43.7 6.0 114 324-460 1-132 (303)
135 3h5n_A MCCB protein; ubiquitin 81.5 0.8 2.7E-05 47.7 3.3 37 317-367 115-151 (353)
136 3jtm_A Formate dehydrogenase, 81.3 6.1 0.00021 41.2 9.9 219 262-527 83-330 (351)
137 3qsg_A NAD-binding phosphogluc 81.3 4.3 0.00015 40.9 8.6 33 324-367 25-57 (312)
138 3hg7_A D-isomer specific 2-hyd 81.2 3.9 0.00013 42.3 8.3 183 299-527 103-302 (324)
139 2qrj_A Saccharopine dehydrogen 81.1 3.3 0.00011 44.3 7.9 97 297-430 160-289 (394)
140 3cky_A 2-hydroxymethyl glutara 80.9 1.6 5.6E-05 42.9 5.2 32 324-367 5-36 (301)
141 4huj_A Uncharacterized protein 80.8 1.3 4.6E-05 42.2 4.4 93 324-448 24-117 (220)
142 4dll_A 2-hydroxy-3-oxopropiona 80.6 1.6 5.6E-05 44.1 5.1 32 324-367 32-63 (320)
143 3gvx_A Glycerate dehydrogenase 80.4 13 0.00044 37.7 11.8 160 319-527 118-281 (290)
144 3vrd_B FCCB subunit, flavocyto 80.3 1.6 5.3E-05 44.7 5.0 35 323-367 2-36 (401)
145 1nvt_A Shikimate 5'-dehydrogen 80.3 1.6 5.5E-05 43.5 5.0 49 303-367 111-159 (287)
146 2d0i_A Dehydrogenase; structur 80.1 8.1 0.00028 39.7 10.3 90 320-445 143-236 (333)
147 2yq5_A D-isomer specific 2-hyd 79.9 12 0.00041 38.9 11.6 134 289-459 94-251 (343)
148 2cuk_A Glycerate dehydrogenase 79.9 9.9 0.00034 38.7 10.7 210 263-527 63-302 (311)
149 3b1f_A Putative prephenate deh 79.7 1.9 6.6E-05 42.3 5.2 97 324-447 7-104 (290)
150 1y8q_A Ubiquitin-like 1 activa 79.5 0.99 3.4E-05 46.9 3.2 33 324-367 37-69 (346)
151 1vpd_A Tartronate semialdehyde 79.4 1.6 5.4E-05 43.0 4.5 32 324-367 6-37 (299)
152 1xdw_A NAD+-dependent (R)-2-hy 79.3 6.1 0.00021 40.6 9.0 142 267-447 72-237 (331)
153 3ghy_A Ketopantoate reductase 79.3 1.2 4.2E-05 45.2 3.8 103 324-447 4-107 (335)
154 1smk_A Malate dehydrogenase, g 78.9 1.6 5.5E-05 44.7 4.5 104 324-448 9-129 (326)
155 2uyy_A N-PAC protein; long-cha 78.3 2.7 9.4E-05 41.9 5.9 32 324-367 31-62 (316)
156 1a5z_A L-lactate dehydrogenase 78.2 2.6 8.8E-05 42.9 5.7 105 325-449 2-121 (319)
157 3c24_A Putative oxidoreductase 77.6 1.9 6.6E-05 42.5 4.5 93 324-448 12-105 (286)
158 3qha_A Putative oxidoreductase 77.5 2.1 7.2E-05 42.7 4.8 32 324-367 16-47 (296)
159 2dbq_A Glyoxylate reductase; D 77.3 7.7 0.00026 39.8 9.1 148 261-445 63-241 (334)
160 1oju_A MDH, malate dehydrogena 77.1 1.6 5.3E-05 44.6 3.7 115 325-460 2-131 (294)
161 1ldn_A L-lactate dehydrogenase 77.0 1 3.5E-05 46.0 2.3 114 324-459 7-135 (316)
162 3evt_A Phosphoglycerate dehydr 76.9 10 0.00034 39.2 9.8 220 261-526 57-300 (324)
163 3k6j_A Protein F01G10.3, confi 76.9 2.1 7.3E-05 46.5 5.0 36 485-520 232-267 (460)
164 1dxy_A D-2-hydroxyisocaproate 76.8 11 0.00038 38.7 10.1 161 267-468 71-255 (333)
165 1j4a_A D-LDH, D-lactate dehydr 76.8 11 0.00037 38.8 10.0 143 288-468 93-257 (333)
166 3ggo_A Prephenate dehydrogenas 76.8 5.2 0.00018 40.7 7.5 34 324-367 34-67 (314)
167 3hn2_A 2-dehydropantoate 2-red 76.7 1.8 6.2E-05 43.5 4.1 103 324-448 3-107 (312)
168 2pi1_A D-lactate dehydrogenase 76.6 11 0.00038 38.9 10.0 168 261-468 60-252 (334)
169 3g0o_A 3-hydroxyisobutyrate de 76.5 1.3 4.6E-05 44.2 3.0 32 324-367 8-39 (303)
170 3vku_A L-LDH, L-lactate dehydr 76.3 3.8 0.00013 42.4 6.4 114 324-460 10-138 (326)
171 1guz_A Malate dehydrogenase; o 76.2 1 3.6E-05 45.6 2.2 106 325-448 2-122 (310)
172 2cvz_A Dehydrogenase, 3-hydrox 76.2 1.6 5.3E-05 42.6 3.3 31 324-367 2-32 (289)
173 2z2v_A Hypothetical protein PH 76.1 2.8 9.7E-05 43.7 5.5 121 324-476 17-137 (365)
174 1yb4_A Tartronic semialdehyde 76.1 2.5 8.4E-05 41.4 4.8 21 324-344 4-24 (295)
175 2xxj_A L-LDH, L-lactate dehydr 76.0 2 7E-05 43.8 4.3 114 324-460 1-129 (310)
176 4hb9_A Similarities with proba 75.9 1.6 5.6E-05 43.7 3.5 32 324-367 2-33 (412)
177 1hyu_A AHPF, alkyl hydroperoxi 75.6 0.85 2.9E-05 49.3 1.4 103 251-367 134-244 (521)
178 1hdo_A Biliverdin IX beta redu 75.4 5.6 0.00019 35.9 6.7 73 324-418 4-77 (206)
179 2d4a_B Malate dehydrogenase; a 75.2 1.7 5.8E-05 44.3 3.4 105 325-448 1-120 (308)
180 1ur5_A Malate dehydrogenase; o 75.1 1.8 6E-05 44.1 3.5 106 324-448 3-123 (309)
181 2w2k_A D-mandelate dehydrogena 75.1 7.8 0.00027 40.1 8.4 111 320-465 160-275 (348)
182 2d5c_A AROE, shikimate 5-dehyd 74.6 3.1 0.00011 40.7 5.1 47 305-367 102-148 (263)
183 2nac_A NAD-dependent formate d 74.0 7.4 0.00025 41.3 8.1 219 263-527 111-357 (393)
184 4b4u_A Bifunctional protein fo 73.8 6.3 0.00022 40.8 7.3 131 253-429 97-243 (303)
185 3phh_A Shikimate dehydrogenase 73.4 1.8 6.3E-05 43.7 3.1 43 306-367 108-150 (269)
186 1tt5_B Ubiquitin-activating en 73.2 1.4 4.7E-05 47.5 2.3 33 324-367 41-73 (434)
187 3kb6_A D-lactate dehydrogenase 72.8 16 0.00055 37.7 10.1 147 262-446 61-232 (334)
188 4e5n_A Thermostable phosphite 72.8 7 0.00024 40.3 7.4 168 263-468 65-258 (330)
189 1qp8_A Formate dehydrogenase; 72.6 19 0.00066 36.5 10.5 143 262-445 47-211 (303)
190 3fbs_A Oxidoreductase; structu 72.5 2.2 7.5E-05 40.8 3.3 32 324-367 3-34 (297)
191 3hdj_A Probable ornithine cycl 72.3 25 0.00087 35.8 11.4 102 324-457 122-227 (313)
192 3d1c_A Flavin-containing putat 72.3 2.2 7.5E-05 42.5 3.3 34 324-368 5-38 (369)
193 3d0o_A L-LDH 1, L-lactate dehy 72.0 2.5 8.6E-05 43.1 3.8 115 324-460 7-136 (317)
194 3l6d_A Putative oxidoreductase 71.8 2.7 9.1E-05 42.3 3.9 32 324-367 10-41 (306)
195 3fi9_A Malate dehydrogenase; s 71.6 3.9 0.00013 42.7 5.2 118 321-461 6-140 (343)
196 4a9w_A Monooxygenase; baeyer-v 71.5 1.8 6.2E-05 42.3 2.5 33 324-368 4-36 (357)
197 2g76_A 3-PGDH, D-3-phosphoglyc 71.1 15 0.0005 38.0 9.4 149 263-448 87-259 (335)
198 2g1u_A Hypothetical protein TM 71.1 3.2 0.00011 37.1 3.8 32 324-367 20-51 (155)
199 1y8q_B Anthracycline-, ubiquit 70.9 1.9 6.6E-05 48.8 2.8 34 323-367 17-50 (640)
200 3f8d_A Thioredoxin reductase ( 70.8 2.5 8.6E-05 40.8 3.3 32 324-367 16-47 (323)
201 3pp8_A Glyoxylate/hydroxypyruv 70.0 10 0.00036 38.8 7.9 218 264-527 58-301 (315)
202 1hye_A L-lactate/malate dehydr 69.9 4 0.00014 41.4 4.7 127 325-471 2-148 (313)
203 4egb_A DTDP-glucose 4,6-dehydr 69.6 9.1 0.00031 37.8 7.2 104 324-444 25-149 (346)
204 2zbw_A Thioredoxin reductase; 69.5 2.7 9.4E-05 41.2 3.3 33 324-368 6-38 (335)
205 3lzw_A Ferredoxin--NADP reduct 69.4 2.7 9.1E-05 40.9 3.2 33 324-368 8-40 (332)
206 3h8l_A NADH oxidase; membrane 69.3 3.1 0.0001 42.8 3.8 36 324-368 2-37 (409)
207 2gf2_A Hibadh, 3-hydroxyisobut 69.3 6.1 0.00021 38.7 5.8 31 325-367 2-32 (296)
208 3fg2_P Putative rubredoxin red 69.1 4.3 0.00015 41.8 4.8 36 324-369 2-37 (404)
209 3iwa_A FAD-dependent pyridine 69.0 3 0.0001 43.9 3.7 36 324-369 4-39 (472)
210 3hwr_A 2-dehydropantoate 2-red 68.6 1.5 5.1E-05 44.4 1.2 97 323-449 19-125 (318)
211 2hmt_A YUAA protein; RCK, KTN, 68.3 2.6 8.8E-05 36.0 2.5 32 324-367 7-38 (144)
212 3hyw_A Sulfide-quinone reducta 68.1 3.3 0.00011 43.3 3.8 34 324-367 3-36 (430)
213 3tl2_A Malate dehydrogenase; c 68.0 1.6 5.5E-05 44.9 1.3 114 324-459 9-139 (315)
214 3itj_A Thioredoxin reductase 1 67.9 2.3 8E-05 41.4 2.4 32 324-367 23-54 (338)
215 3oz2_A Digeranylgeranylglycero 67.6 2.8 9.7E-05 41.5 3.0 30 326-367 7-36 (397)
216 3axb_A Putative oxidoreductase 67.6 4.5 0.00015 41.9 4.6 32 324-366 24-55 (448)
217 3pdi_B Nitrogenase MOFE cofact 67.6 6.8 0.00023 42.2 6.1 183 149-417 177-384 (458)
218 2jae_A L-amino acid oxidase; o 67.5 3.2 0.00011 43.6 3.5 43 313-370 4-46 (489)
219 3c85_A Putative glutathione-re 67.2 3.9 0.00013 37.3 3.6 35 322-367 38-72 (183)
220 2ywl_A Thioredoxin reductase r 67.1 3.6 0.00012 37.0 3.3 33 324-368 2-34 (180)
221 3alj_A 2-methyl-3-hydroxypyrid 66.9 3.4 0.00012 41.9 3.5 34 324-369 12-45 (379)
222 1lss_A TRK system potassium up 66.8 4.1 0.00014 34.7 3.5 32 324-367 5-36 (140)
223 3gg9_A D-3-phosphoglycerate de 66.7 23 0.00077 36.9 9.7 197 288-527 98-325 (352)
224 4ezb_A Uncharacterized conserv 66.6 5.8 0.0002 40.2 5.1 33 324-367 25-57 (317)
225 3ip1_A Alcohol dehydrogenase, 66.5 19 0.00066 37.2 9.2 85 324-430 215-304 (404)
226 3p7m_A Malate dehydrogenase; p 66.5 1.8 6E-05 44.7 1.2 117 323-461 5-136 (321)
227 3rp8_A Flavoprotein monooxygen 66.1 3.7 0.00013 41.9 3.6 34 323-368 23-56 (407)
228 3llv_A Exopolyphosphatase-rela 66.0 3.7 0.00013 35.7 3.1 32 324-367 7-38 (141)
229 2q7v_A Thioredoxin reductase; 65.8 3.6 0.00012 40.4 3.3 32 324-367 9-40 (325)
230 3ic5_A Putative saccharopine d 65.5 3.7 0.00013 33.8 2.9 85 324-432 6-91 (118)
231 1id1_A Putative potassium chan 65.4 4.3 0.00015 36.1 3.4 33 323-367 3-35 (153)
232 2xdo_A TETX2 protein; tetracyc 65.3 3.6 0.00012 42.1 3.3 33 324-368 27-59 (398)
233 3ef6_A Toluene 1,2-dioxygenase 65.2 6.4 0.00022 40.7 5.2 37 324-370 3-39 (410)
234 1ryi_A Glycine oxidase; flavop 65.1 3.8 0.00013 41.1 3.3 34 324-369 18-51 (382)
235 1yvv_A Amine oxidase, flavin-c 65.0 3.6 0.00012 40.4 3.1 33 324-368 3-35 (336)
236 3ldh_A Lactate dehydrogenase; 64.8 2.2 7.5E-05 44.4 1.6 116 324-461 22-152 (330)
237 3r9u_A Thioredoxin reductase; 64.8 3.5 0.00012 39.7 3.0 32 324-367 5-37 (315)
238 3cgv_A Geranylgeranyl reductas 64.7 3 0.0001 41.9 2.5 34 324-369 5-38 (397)
239 2pv7_A T-protein [includes: ch 64.6 12 0.00041 37.3 6.9 32 324-367 22-54 (298)
240 3fwz_A Inner membrane protein 64.6 4.2 0.00014 35.8 3.2 32 324-367 8-39 (140)
241 3nep_X Malate dehydrogenase; h 64.6 3.2 0.00011 42.7 2.8 114 325-459 2-130 (314)
242 3fys_A Protein DEGV; fatty aci 64.4 3.8 0.00013 42.3 3.2 150 147-357 16-178 (315)
243 3cty_A Thioredoxin reductase; 64.4 4 0.00014 39.9 3.3 32 324-367 17-48 (319)
244 1np3_A Ketol-acid reductoisome 64.3 5.6 0.00019 40.7 4.5 87 324-441 17-104 (338)
245 3dme_A Conserved exported prot 64.3 4.1 0.00014 40.1 3.4 32 324-367 5-36 (369)
246 3s5w_A L-ornithine 5-monooxyge 64.1 4.6 0.00016 42.0 3.9 39 324-369 31-69 (463)
247 2vdc_G Glutamate synthase [NAD 63.9 4.4 0.00015 43.3 3.7 34 323-368 122-155 (456)
248 3lxd_A FAD-dependent pyridine 63.8 6.1 0.00021 40.7 4.8 36 324-369 10-45 (415)
249 3kd9_A Coenzyme A disulfide re 63.8 5.1 0.00017 41.9 4.2 36 323-368 3-38 (449)
250 1y56_B Sarcosine oxidase; dehy 63.6 4.1 0.00014 40.9 3.3 33 324-368 6-38 (382)
251 3pqe_A L-LDH, L-lactate dehydr 63.2 4.1 0.00014 42.1 3.2 115 324-460 6-135 (326)
252 1y7t_A Malate dehydrogenase; N 63.1 3 0.0001 42.2 2.2 110 324-447 5-133 (327)
253 3k7m_X 6-hydroxy-L-nicotine ox 63.1 4.5 0.00015 41.4 3.6 33 324-368 2-34 (431)
254 2vou_A 2,6-dihydroxypyridine h 63.0 4.8 0.00016 41.1 3.7 33 324-368 6-38 (397)
255 2gf3_A MSOX, monomeric sarcosi 63.0 4.1 0.00014 40.8 3.2 35 324-370 4-38 (389)
256 3ab1_A Ferredoxin--NADP reduct 62.9 4.3 0.00015 40.6 3.3 33 324-368 15-47 (360)
257 3c96_A Flavin-containing monoo 62.2 4.6 0.00016 41.4 3.5 34 324-368 5-38 (410)
258 2gqw_A Ferredoxin reductase; f 62.2 5.5 0.00019 41.3 4.0 37 324-370 8-44 (408)
259 3qy9_A DHPR, dihydrodipicolina 62.1 17 0.00059 36.0 7.4 21 324-344 4-24 (243)
260 1pqw_A Polyketide synthase; ro 62.0 15 0.0005 33.7 6.5 50 303-367 22-72 (198)
261 1c0p_A D-amino acid oxidase; a 61.8 5.6 0.00019 39.8 3.9 33 324-368 7-39 (363)
262 4ej6_A Putative zinc-binding d 61.8 15 0.0005 37.7 7.1 109 295-430 159-274 (370)
263 2x3n_A Probable FAD-dependent 61.7 4.5 0.00015 41.1 3.2 33 324-368 7-39 (399)
264 2gag_B Heterotetrameric sarcos 61.6 4.8 0.00016 40.5 3.4 35 324-368 22-56 (405)
265 3ics_A Coenzyme A-disulfide re 61.6 5.4 0.00018 43.3 4.0 36 324-369 37-72 (588)
266 4ina_A Saccharopine dehydrogen 61.4 9 0.00031 40.2 5.5 91 324-431 2-97 (405)
267 3nix_A Flavoprotein/dehydrogen 61.4 3.9 0.00013 41.6 2.7 33 324-368 6-38 (421)
268 2uzz_A N-methyl-L-tryptophan o 61.3 4.3 0.00015 40.5 2.9 35 324-370 3-37 (372)
269 3m6i_A L-arabinitol 4-dehydrog 61.0 9.8 0.00034 38.6 5.6 58 294-366 155-212 (363)
270 1lqt_A FPRA; NADP+ derivative, 60.9 5.4 0.00018 42.5 3.7 38 323-367 3-42 (456)
271 3c4a_A Probable tryptophan hyd 60.8 5.8 0.0002 40.3 3.9 34 325-368 2-35 (381)
272 2oln_A NIKD protein; flavoprot 60.7 5.3 0.00018 40.5 3.5 35 324-370 5-39 (397)
273 1tt5_A APPBP1, amyloid protein 60.7 2.9 9.9E-05 46.1 1.7 33 324-367 33-65 (531)
274 2bc0_A NADH oxidase; flavoprot 60.6 6.9 0.00024 41.6 4.6 36 324-368 36-71 (490)
275 4g6h_A Rotenone-insensitive NA 60.6 3 0.0001 45.0 1.8 32 324-367 43-74 (502)
276 2xve_A Flavin-containing monoo 60.5 4.7 0.00016 42.7 3.3 38 324-367 3-40 (464)
277 4eqs_A Coenzyme A disulfide re 60.4 7.5 0.00026 40.9 4.7 34 325-368 2-35 (437)
278 1zk7_A HGII, reductase, mercur 60.4 5.5 0.00019 41.8 3.7 32 324-367 5-36 (467)
279 3fpz_A Thiazole biosynthetic e 60.3 7.5 0.00026 38.7 4.5 34 324-367 66-99 (326)
280 4eez_A Alcohol dehydrogenase 1 60.1 15 0.00051 36.8 6.7 48 304-366 149-196 (348)
281 3gg2_A Sugar dehydrogenase, UD 60.1 16 0.00054 39.2 7.2 32 324-367 3-34 (450)
282 2x0j_A Malate dehydrogenase; o 60.0 8.8 0.0003 39.2 5.0 116 324-460 1-131 (294)
283 3i6d_A Protoporphyrinogen oxid 59.9 6.9 0.00024 40.1 4.3 38 324-367 6-43 (470)
284 1k0i_A P-hydroxybenzoate hydro 59.8 5.4 0.00019 40.3 3.4 33 324-368 3-35 (394)
285 1m6i_A Programmed cell death p 59.8 8.3 0.00028 41.2 5.0 35 324-368 12-46 (493)
286 1vdc_A NTR, NADPH dependent th 59.8 4.2 0.00014 39.9 2.5 31 324-366 9-39 (333)
287 2weu_A Tryptophan 5-halogenase 59.5 5.2 0.00018 42.4 3.4 37 324-369 3-39 (511)
288 3oc4_A Oxidoreductase, pyridin 59.5 5.8 0.0002 41.5 3.7 36 324-369 3-38 (452)
289 2q0l_A TRXR, thioredoxin reduc 59.3 5.6 0.00019 38.6 3.3 33 324-367 2-34 (311)
290 1pl8_A Human sorbitol dehydrog 59.3 13 0.00043 37.8 6.0 49 303-366 156-204 (356)
291 3g3e_A D-amino-acid oxidase; F 59.2 7.9 0.00027 38.5 4.5 37 325-368 2-39 (351)
292 3h28_A Sulfide-quinone reducta 59.1 8.8 0.0003 39.8 4.9 35 324-368 3-37 (430)
293 2cul_A Glucose-inhibited divis 58.7 5.8 0.0002 37.7 3.2 32 324-367 4-35 (232)
294 3c4n_A Uncharacterized protein 58.5 6.9 0.00024 40.3 4.0 35 324-368 37-71 (405)
295 3ntd_A FAD-dependent pyridine 58.4 6.2 0.00021 42.3 3.8 36 324-369 2-37 (565)
296 4f3y_A DHPR, dihydrodipicolina 58.1 27 0.00092 35.1 8.1 94 324-441 8-102 (272)
297 3i3l_A Alkylhalidase CMLS; fla 58.0 6.1 0.00021 43.7 3.7 33 323-367 23-55 (591)
298 3ihm_A Styrene monooxygenase A 58.0 5.7 0.00019 41.5 3.3 32 324-367 23-54 (430)
299 1ygy_A PGDH, D-3-phosphoglycer 57.9 33 0.0011 37.4 9.4 146 263-445 64-233 (529)
300 1dxl_A Dihydrolipoamide dehydr 57.9 6.8 0.00023 41.0 3.9 33 324-368 7-39 (470)
301 3ka7_A Oxidoreductase; structu 57.8 6.6 0.00023 40.0 3.7 33 325-369 2-34 (425)
302 3uox_A Otemo; baeyer-villiger 57.8 6.3 0.00022 43.0 3.7 34 324-369 10-43 (545)
303 1trb_A Thioredoxin reductase; 57.7 4.2 0.00014 39.5 2.1 32 324-367 6-37 (320)
304 3nrn_A Uncharacterized protein 57.6 6.7 0.00023 40.2 3.7 33 325-369 2-34 (421)
305 3lk7_A UDP-N-acetylmuramoylala 57.6 6.9 0.00024 41.5 3.9 36 320-367 6-41 (451)
306 3sx6_A Sulfide-quinone reducta 57.5 6 0.00021 41.2 3.4 36 324-368 5-40 (437)
307 4gcm_A TRXR, thioredoxin reduc 57.3 6 0.0002 38.6 3.1 31 325-367 8-38 (312)
308 1xdi_A RV3303C-LPDA; reductase 57.2 6.8 0.00023 41.6 3.8 36 324-368 3-38 (499)
309 2cdu_A NADPH oxidase; flavoenz 57.2 7.3 0.00025 40.7 3.9 34 325-368 2-35 (452)
310 2nvu_B Maltose binding protein 57.2 3.6 0.00012 47.0 1.7 35 322-367 410-444 (805)
311 2e4g_A Tryptophan halogenase; 56.8 5.9 0.0002 42.9 3.3 37 324-369 26-62 (550)
312 1nhp_A NADH peroxidase; oxidor 56.8 7.6 0.00026 40.5 4.0 35 325-369 2-36 (447)
313 3cmm_A Ubiquitin-activating en 56.7 6 0.00021 47.0 3.5 37 317-367 24-60 (1015)
314 3urh_A Dihydrolipoyl dehydroge 56.7 6.2 0.00021 41.8 3.4 34 324-369 26-59 (491)
315 3k30_A Histamine dehydrogenase 56.4 7.6 0.00026 43.4 4.1 33 324-368 392-424 (690)
316 3dje_A Fructosyl amine: oxygen 56.3 6.7 0.00023 40.4 3.5 36 324-370 7-42 (438)
317 3klj_A NAD(FAD)-dependent dehy 56.3 7.6 0.00026 40.2 3.9 35 324-370 10-44 (385)
318 2dq4_A L-threonine 3-dehydroge 55.8 9.8 0.00033 38.3 4.5 99 303-430 149-252 (343)
319 2a87_A TRXR, TR, thioredoxin r 55.6 5.6 0.00019 39.4 2.6 32 324-367 15-46 (335)
320 4ap3_A Steroid monooxygenase; 55.5 6.5 0.00022 43.0 3.3 34 324-369 22-55 (549)
321 3cgb_A Pyridine nucleotide-dis 55.3 7.9 0.00027 41.0 3.9 36 324-369 37-72 (480)
322 1zmd_A Dihydrolipoyl dehydroge 55.2 6.8 0.00023 41.2 3.3 33 324-368 7-39 (474)
323 3lov_A Protoporphyrinogen oxid 55.1 9.6 0.00033 39.6 4.4 35 324-368 5-39 (475)
324 3qj4_A Renalase; FAD/NAD(P)-bi 55.1 4.6 0.00016 40.2 1.9 35 324-367 2-36 (342)
325 2r9z_A Glutathione amide reduc 55.0 7.3 0.00025 41.2 3.5 32 324-367 5-36 (463)
326 1mo9_A ORF3; nucleotide bindin 54.9 6.7 0.00023 42.2 3.3 33 324-368 44-76 (523)
327 2yqu_A 2-oxoglutarate dehydrog 54.9 6.9 0.00024 40.9 3.3 33 324-368 2-34 (455)
328 3v76_A Flavoprotein; structura 54.8 6.3 0.00021 41.6 3.0 34 324-369 28-61 (417)
329 2hqm_A GR, grase, glutathione 54.7 6.6 0.00023 41.6 3.2 33 324-368 12-44 (479)
330 1fl2_A Alkyl hydroperoxide red 54.5 6.3 0.00022 38.2 2.8 32 324-367 2-33 (310)
331 2aqj_A Tryptophan halogenase, 54.5 6.9 0.00024 42.1 3.3 36 324-368 6-41 (538)
332 2qae_A Lipoamide, dihydrolipoy 54.5 7.3 0.00025 40.9 3.4 33 324-368 3-35 (468)
333 2a8x_A Dihydrolipoyl dehydroge 54.5 6.2 0.00021 41.4 2.9 32 324-367 4-35 (464)
334 2raf_A Putative dinucleotide-b 54.2 7.9 0.00027 36.6 3.3 33 323-367 19-51 (209)
335 2qcu_A Aerobic glycerol-3-phos 54.1 6.9 0.00024 41.8 3.2 33 324-368 4-36 (501)
336 1ebd_A E3BD, dihydrolipoamide 53.7 6.6 0.00022 41.1 2.9 32 324-367 4-35 (455)
337 2gv8_A Monooxygenase; FMO, FAD 53.7 11 0.00038 39.3 4.6 35 324-368 7-41 (447)
338 2bry_A NEDD9 interacting prote 53.6 8.2 0.00028 41.4 3.7 35 324-370 93-127 (497)
339 3nrc_A Enoyl-[acyl-carrier-pro 53.5 9.5 0.00032 37.2 3.9 38 319-368 22-62 (280)
340 4a2c_A Galactitol-1-phosphate 53.4 25 0.00084 35.1 7.0 49 303-366 145-193 (346)
341 2eq6_A Pyruvate dehydrogenase 53.1 7.7 0.00026 40.9 3.3 33 324-368 7-39 (464)
342 2d8a_A PH0655, probable L-thre 53.0 9.5 0.00033 38.5 3.9 48 303-366 153-200 (348)
343 1ges_A Glutathione reductase; 52.9 6.7 0.00023 41.2 2.8 32 324-367 5-36 (450)
344 1v59_A Dihydrolipoamide dehydr 52.5 8.7 0.0003 40.4 3.6 33 324-368 6-38 (478)
345 1w4x_A Phenylacetone monooxyge 52.3 7.9 0.00027 41.8 3.3 34 324-369 17-50 (542)
346 3dfz_A SIRC, precorrin-2 dehyd 52.2 6.3 0.00022 38.7 2.3 35 321-367 29-63 (223)
347 3hhp_A Malate dehydrogenase; M 52.1 18 0.00062 37.0 5.8 105 325-448 2-122 (312)
348 1q1r_A Putidaredoxin reductase 52.1 13 0.00046 38.7 5.0 36 324-369 5-40 (431)
349 3l8k_A Dihydrolipoyl dehydroge 52.0 8.5 0.00029 40.5 3.5 34 324-369 5-38 (466)
350 1onf_A GR, grase, glutathione 51.8 7.7 0.00026 41.4 3.1 33 324-368 3-35 (500)
351 3s2u_A UDP-N-acetylglucosamine 51.6 15 0.00052 37.4 5.2 42 400-446 84-125 (365)
352 1z82_A Glycerol-3-phosphate de 51.4 9.2 0.00032 38.5 3.5 100 323-449 14-116 (335)
353 3abi_A Putative uncharacterize 51.2 12 0.0004 38.5 4.2 92 324-445 17-109 (365)
354 3m2p_A UDP-N-acetylglucosamine 51.2 35 0.0012 33.2 7.5 94 324-444 3-109 (311)
355 2ph5_A Homospermidine synthase 51.1 17 0.00058 39.8 5.7 100 324-445 14-115 (480)
356 4a5l_A Thioredoxin reductase; 51.1 6.9 0.00024 37.9 2.4 31 325-367 6-36 (314)
357 4b63_A L-ornithine N5 monooxyg 51.1 7.8 0.00027 41.6 3.0 23 325-347 41-63 (501)
358 1lvl_A Dihydrolipoamide dehydr 50.7 8.4 0.00029 40.5 3.2 32 324-367 6-37 (458)
359 3gwf_A Cyclohexanone monooxyge 50.7 7.1 0.00024 42.6 2.7 34 324-368 9-42 (540)
360 3ihg_A RDME; flavoenzyme, anth 50.5 7.8 0.00027 41.5 2.9 33 324-368 6-38 (535)
361 2e1m_A L-glutamate oxidase; L- 50.5 9.4 0.00032 40.1 3.5 32 324-367 45-76 (376)
362 1e6u_A GDP-fucose synthetase; 50.5 15 0.00051 35.7 4.8 87 323-444 3-107 (321)
363 3o0h_A Glutathione reductase; 50.3 9.5 0.00033 40.4 3.5 32 324-367 27-58 (484)
364 1o94_A Tmadh, trimethylamine d 50.3 9.3 0.00032 43.2 3.6 33 324-368 390-422 (729)
365 1cjc_A Protein (adrenodoxin re 50.2 10 0.00035 40.4 3.7 35 324-368 7-41 (460)
366 1rsg_A FMS1 protein; FAD bindi 49.9 8.8 0.0003 40.8 3.2 22 324-345 9-30 (516)
367 2bi7_A UDP-galactopyranose mut 49.9 10 0.00034 39.3 3.5 33 324-368 4-36 (384)
368 2ew2_A 2-dehydropantoate 2-red 49.7 9.8 0.00034 37.1 3.3 105 324-448 4-112 (316)
369 4fk1_A Putative thioredoxin re 49.6 9.4 0.00032 37.3 3.1 32 324-367 7-38 (304)
370 4gde_A UDP-galactopyranose mut 49.6 15 0.00052 38.2 4.9 22 324-345 11-32 (513)
371 1rp0_A ARA6, thiazole biosynth 49.5 8 0.00028 38.0 2.6 36 324-370 40-75 (284)
372 1ojt_A Surface protein; redox- 49.3 10 0.00036 40.0 3.6 33 324-368 7-39 (482)
373 1yqd_A Sinapyl alcohol dehydro 49.2 24 0.00084 35.9 6.3 47 305-366 173-219 (366)
374 2qa2_A CABE, polyketide oxygen 49.2 10 0.00034 40.7 3.5 32 324-367 13-44 (499)
375 3fpc_A NADP-dependent alcohol 49.1 10 0.00036 38.3 3.5 49 303-366 151-199 (352)
376 3r6d_A NAD-dependent epimerase 49.1 10 0.00035 35.2 3.1 95 324-442 6-106 (221)
377 2o7s_A DHQ-SDH PR, bifunctiona 49.1 12 0.00043 40.6 4.3 35 321-367 362-396 (523)
378 2pyx_A Tryptophan halogenase; 48.7 9.1 0.00031 41.0 3.1 38 324-368 8-52 (526)
379 3e1t_A Halogenase; flavoprotei 48.6 8.1 0.00028 41.3 2.7 33 324-368 8-40 (512)
380 1xhc_A NADH oxidase /nitrite r 48.6 10 0.00036 38.7 3.4 35 323-370 8-42 (367)
381 2wpf_A Trypanothione reductase 48.4 12 0.00042 39.9 4.0 31 324-365 8-38 (495)
382 4id9_A Short-chain dehydrogena 48.3 31 0.001 34.0 6.7 95 321-444 17-126 (347)
383 3nyc_A D-arginine dehydrogenas 48.2 6.6 0.00023 38.9 1.8 33 323-368 9-41 (381)
384 1s3e_A Amine oxidase [flavin-c 47.9 11 0.00036 40.1 3.4 33 324-368 5-37 (520)
385 1wly_A CAAR, 2-haloacrylate re 47.9 25 0.00084 35.1 6.0 51 302-367 128-179 (333)
386 3dk9_A Grase, GR, glutathione 47.8 9.8 0.00033 40.1 3.1 33 324-368 21-53 (478)
387 3l4b_C TRKA K+ channel protien 47.8 9.8 0.00034 35.7 2.8 31 325-367 2-32 (218)
388 1e3j_A NADP(H)-dependent ketos 47.7 22 0.00075 35.9 5.6 48 303-366 153-200 (352)
389 1lld_A L-lactate dehydrogenase 47.6 18 0.0006 36.0 4.8 107 324-449 8-129 (319)
390 4a7p_A UDP-glucose dehydrogena 47.5 18 0.00061 38.9 5.1 45 409-454 122-166 (446)
391 2cdc_A Glucose dehydrogenase g 47.4 33 0.0011 34.8 6.9 33 323-367 181-213 (366)
392 2i0z_A NAD(FAD)-utilizing dehy 47.4 9.6 0.00033 40.0 3.0 34 324-369 27-60 (447)
393 3lad_A Dihydrolipoamide dehydr 47.3 12 0.00041 39.3 3.7 33 324-368 4-36 (476)
394 2qa1_A PGAE, polyketide oxygen 47.3 11 0.00037 40.5 3.4 32 324-367 12-43 (500)
395 2gqf_A Hypothetical protein HI 46.9 7.8 0.00027 40.4 2.2 34 324-369 5-38 (401)
396 2iid_A L-amino-acid oxidase; f 46.7 14 0.00049 38.6 4.2 32 324-367 34-65 (498)
397 3slg_A PBGP3 protein; structur 46.5 46 0.0016 33.1 7.7 102 321-444 22-141 (372)
398 4dgk_A Phytoene dehydrogenase; 46.4 9.6 0.00033 39.8 2.8 22 324-345 2-23 (501)
399 1ps9_A 2,4-dienoyl-COA reducta 46.2 11 0.00036 42.0 3.2 33 324-368 374-406 (671)
400 2r0c_A REBC; flavin adenine di 46.2 11 0.00037 40.9 3.2 33 324-368 27-59 (549)
401 2pzm_A Putative nucleotide sug 46.2 21 0.00073 35.2 5.1 107 318-444 15-136 (330)
402 2b9w_A Putative aminooxidase; 46.1 11 0.00039 38.4 3.2 34 324-368 7-40 (424)
403 3ps9_A TRNA 5-methylaminomethy 46.0 12 0.0004 41.6 3.5 33 324-368 273-305 (676)
404 2rgh_A Alpha-glycerophosphate 45.8 11 0.00037 41.3 3.2 34 324-369 33-66 (571)
405 1omo_A Alanine dehydrogenase; 45.8 46 0.0016 33.8 7.6 115 305-455 112-229 (322)
406 1v0j_A UDP-galactopyranose mut 45.8 13 0.00045 38.4 3.7 34 324-368 8-41 (399)
407 3ek2_A Enoyl-(acyl-carrier-pro 45.5 11 0.00038 35.9 2.8 36 320-367 11-49 (271)
408 4gbj_A 6-phosphogluconate dehy 45.4 8.2 0.00028 38.9 2.0 32 324-367 6-37 (297)
409 2yg5_A Putrescine oxidase; oxi 45.4 13 0.00044 38.3 3.5 32 324-367 6-37 (453)
410 2ivd_A PPO, PPOX, protoporphyr 45.3 9.5 0.00033 39.6 2.5 32 324-367 17-48 (478)
411 3da1_A Glycerol-3-phosphate de 44.8 10 0.00036 41.4 2.8 32 324-367 19-50 (561)
412 3uko_A Alcohol dehydrogenase c 44.8 26 0.00088 35.8 5.6 32 324-366 195-226 (378)
413 2v3a_A Rubredoxin reductase; a 44.8 16 0.00054 37.2 4.0 34 324-367 5-38 (384)
414 1fec_A Trypanothione reductase 44.7 15 0.00052 39.0 4.0 31 324-365 4-34 (490)
415 1gdh_A D-glycerate dehydrogena 44.7 21 0.00071 36.4 4.9 123 289-445 91-239 (320)
416 3g17_A Similar to 2-dehydropan 44.6 12 0.0004 37.2 2.9 98 324-451 3-103 (294)
417 3atr_A Conserved archaeal prot 44.6 6.3 0.00022 41.2 1.0 34 324-369 7-40 (453)
418 2vvm_A Monoamine oxidase N; FA 44.5 13 0.00045 38.9 3.5 32 324-367 40-71 (495)
419 3pvc_A TRNA 5-methylaminomethy 44.3 10 0.00035 42.3 2.7 33 324-368 265-297 (689)
420 4dna_A Probable glutathione re 44.3 12 0.0004 39.4 3.0 32 324-367 6-37 (463)
421 1dlj_A UDP-glucose dehydrogena 44.1 23 0.00077 37.1 5.2 30 325-367 2-31 (402)
422 3dhn_A NAD-dependent epimerase 43.9 24 0.00084 32.4 4.9 95 324-442 5-110 (227)
423 1gte_A Dihydropyrimidine dehyd 43.9 11 0.00039 44.3 3.2 34 324-368 188-221 (1025)
424 3qvo_A NMRA family protein; st 43.8 24 0.00083 33.1 4.9 99 324-444 24-125 (236)
425 2yy7_A L-threonine dehydrogena 43.6 20 0.00068 34.6 4.4 99 324-443 3-117 (312)
426 1kyq_A Met8P, siroheme biosynt 43.6 10 0.00035 38.4 2.3 35 321-367 11-45 (274)
427 2vns_A Metalloreductase steap3 43.4 14 0.00047 35.0 3.1 91 324-448 29-119 (215)
428 1n2s_A DTDP-4-, DTDP-glucose o 43.2 20 0.0007 34.4 4.3 86 325-444 2-104 (299)
429 3e48_A Putative nucleoside-dip 43.1 24 0.00083 33.8 4.9 98 325-444 2-106 (289)
430 4fs3_A Enoyl-[acyl-carrier-pro 42.7 18 0.00063 35.0 4.0 35 321-367 4-41 (256)
431 2gmh_A Electron transfer flavo 42.6 24 0.00082 38.7 5.3 37 324-368 36-74 (584)
432 3ijp_A DHPR, dihydrodipicolina 42.2 51 0.0018 33.5 7.3 96 324-442 22-118 (288)
433 4b7c_A Probable oxidoreductase 42.1 31 0.0011 34.3 5.7 50 302-366 132-182 (336)
434 3hdq_A UDP-galactopyranose mut 42.1 16 0.00056 38.5 3.7 33 324-368 30-62 (397)
435 5mdh_A Malate dehydrogenase; o 41.8 5 0.00017 41.5 -0.3 120 324-461 4-143 (333)
436 2dph_A Formaldehyde dismutase; 41.7 38 0.0013 34.8 6.4 48 304-366 171-218 (398)
437 2q3e_A UDP-glucose 6-dehydroge 41.7 75 0.0026 33.8 8.8 34 324-367 6-39 (467)
438 1zcj_A Peroxisomal bifunctiona 41.6 13 0.00043 39.9 2.8 32 324-367 38-69 (463)
439 2q1w_A Putative nucleotide sug 41.5 45 0.0015 32.9 6.6 104 321-444 19-137 (333)
440 1yqg_A Pyrroline-5-carboxylate 41.3 18 0.0006 34.7 3.6 32 325-367 2-33 (263)
441 1y56_A Hypothetical protein PH 41.2 7.3 0.00025 41.6 0.9 32 324-368 109-140 (493)
442 2cf5_A Atccad5, CAD, cinnamyl 41.2 39 0.0013 34.2 6.3 45 307-366 168-212 (357)
443 3s55_A Putative short-chain de 41.2 41 0.0014 32.5 6.2 37 320-367 7-43 (281)
444 3lup_A DEGV family protein; PS 41.1 9 0.00031 38.7 1.5 132 172-358 4-148 (285)
445 2gjc_A Thiazole biosynthetic e 41.1 18 0.0006 37.5 3.7 37 324-370 66-102 (326)
446 1f8f_A Benzyl alcohol dehydrog 41.0 40 0.0014 34.2 6.3 32 324-366 192-223 (371)
447 3g79_A NDP-N-acetyl-D-galactos 40.9 49 0.0017 35.9 7.3 49 409-457 140-191 (478)
448 2obn_A Hypothetical protein; s 40.9 1.8E+02 0.0061 30.4 11.3 129 323-477 7-141 (349)
449 3nks_A Protoporphyrinogen oxid 40.9 15 0.00051 38.0 3.1 35 324-368 3-37 (477)
450 1zej_A HBD-9, 3-hydroxyacyl-CO 40.8 16 0.00056 37.0 3.3 32 323-367 12-43 (293)
451 2x8g_A Thioredoxin glutathione 40.6 15 0.00052 39.9 3.3 31 324-366 108-138 (598)
452 1pjq_A CYSG, siroheme synthase 40.5 18 0.0006 38.8 3.7 25 321-345 10-34 (457)
453 3ic9_A Dihydrolipoamide dehydr 40.3 13 0.00044 39.6 2.6 32 324-367 9-40 (492)
454 1p0f_A NADP-dependent alcohol 40.3 38 0.0013 34.4 6.0 32 324-366 193-224 (373)
455 4gqa_A NAD binding oxidoreduct 40.2 32 0.0011 35.6 5.5 113 308-439 13-129 (412)
456 2fzw_A Alcohol dehydrogenase c 40.0 38 0.0013 34.3 6.0 32 324-366 192-223 (373)
457 2bcg_G Secretory pathway GDP d 40.0 15 0.00051 38.6 3.0 35 324-370 12-46 (453)
458 2h6e_A ADH-4, D-arabinose 1-de 39.9 36 0.0012 34.2 5.7 21 319-342 170-190 (344)
459 3cmm_A Ubiquitin-activating en 39.8 17 0.00059 43.2 3.8 39 323-367 425-463 (1015)
460 1qo8_A Flavocytochrome C3 fuma 39.7 20 0.00068 38.9 4.0 35 324-370 122-156 (566)
461 3enk_A UDP-glucose 4-epimerase 39.5 29 0.00099 34.0 4.9 102 324-444 6-129 (341)
462 3eag_A UDP-N-acetylmuramate:L- 39.4 17 0.00059 36.7 3.3 32 324-367 5-37 (326)
463 4gut_A Lysine-specific histone 39.3 22 0.00074 40.9 4.4 34 324-369 337-370 (776)
464 2j3h_A NADP-dependent oxidored 39.3 31 0.0011 34.4 5.1 50 302-366 138-188 (345)
465 1i8t_A UDP-galactopyranose mut 39.2 13 0.00046 38.0 2.5 32 324-367 2-33 (367)
466 1qsg_A Enoyl-[acyl-carrier-pro 39.1 17 0.00058 35.0 3.0 35 322-368 8-45 (265)
467 1kol_A Formaldehyde dehydrogen 39.1 38 0.0013 34.7 5.9 48 304-366 171-218 (398)
468 4b8w_A GDP-L-fucose synthase; 39.1 47 0.0016 31.5 6.2 46 398-444 51-113 (319)
469 3euw_A MYO-inositol dehydrogen 38.9 72 0.0025 31.9 7.8 89 324-440 5-93 (344)
470 3o38_A Short chain dehydrogena 38.9 19 0.00063 34.5 3.3 36 320-367 19-56 (266)
471 2x5o_A UDP-N-acetylmuramoylala 38.9 12 0.00042 39.4 2.2 35 322-368 4-38 (439)
472 3r1i_A Short-chain type dehydr 38.9 55 0.0019 31.9 6.7 81 321-418 30-119 (276)
473 1y0p_A Fumarate reductase flav 38.8 17 0.00059 39.4 3.4 35 324-370 127-161 (571)
474 1pn0_A Phenol 2-monooxygenase; 38.8 16 0.00055 40.8 3.2 38 324-368 9-46 (665)
475 3nlc_A Uncharacterized protein 38.7 11 0.00039 41.4 1.9 32 324-367 108-139 (549)
476 3dqp_A Oxidoreductase YLBE; al 38.6 31 0.0011 31.8 4.7 93 325-442 2-104 (219)
477 2nu8_A Succinyl-COA ligase [AD 38.6 72 0.0025 31.9 7.7 84 323-438 7-91 (288)
478 3oec_A Carveol dehydrogenase ( 38.5 41 0.0014 33.5 5.8 40 317-367 40-79 (317)
479 1qor_A Quinone oxidoreductase; 38.4 42 0.0014 33.2 5.9 50 303-367 124-174 (327)
480 3vtz_A Glucose 1-dehydrogenase 38.4 1E+02 0.0035 29.7 8.6 75 321-418 12-91 (269)
481 3fmw_A Oxygenase; mithramycin, 38.2 16 0.00054 40.1 3.0 32 324-367 50-81 (570)
482 3uuw_A Putative oxidoreductase 38.2 48 0.0016 32.7 6.3 88 324-441 7-95 (308)
483 1h2b_A Alcohol dehydrogenase; 38.1 40 0.0014 34.1 5.8 44 307-366 173-219 (359)
484 2dkh_A 3-hydroxybenzoate hydro 37.9 13 0.00044 41.2 2.2 34 324-368 33-66 (639)
485 2qyt_A 2-dehydropantoate 2-red 37.7 20 0.00068 35.1 3.4 111 324-448 9-121 (317)
486 3uve_A Carveol dehydrogenase ( 37.6 49 0.0017 32.0 6.1 34 323-367 11-44 (286)
487 2zxi_A TRNA uridine 5-carboxym 37.6 13 0.00043 42.1 2.1 32 324-367 28-59 (637)
488 3oqb_A Oxidoreductase; structu 37.5 1E+02 0.0036 31.2 8.8 41 397-441 72-112 (383)
489 1v3u_A Leukotriene B4 12- hydr 37.5 38 0.0013 33.6 5.5 52 301-367 127-179 (333)
490 1jay_A Coenzyme F420H2:NADP+ o 37.4 18 0.00063 33.4 2.9 96 325-448 2-101 (212)
491 3mog_A Probable 3-hydroxybutyr 37.4 17 0.00057 39.5 3.0 32 324-367 6-37 (483)
492 3ego_A Probable 2-dehydropanto 37.2 20 0.00069 35.9 3.3 31 324-367 3-33 (307)
493 1pj5_A N,N-dimethylglycine oxi 37.2 17 0.0006 41.3 3.2 35 324-369 5-39 (830)
494 4h08_A Putative hydrolase; GDS 37.1 41 0.0014 30.3 5.2 46 207-269 70-115 (200)
495 2f1k_A Prephenate dehydrogenas 37.0 20 0.0007 34.6 3.3 31 325-367 2-32 (279)
496 3ojo_A CAP5O; rossmann fold, c 36.7 54 0.0018 35.1 6.7 52 405-459 117-174 (431)
497 1tt7_A YHFP; alcohol dehydroge 36.6 55 0.0019 32.4 6.5 32 324-367 152-184 (330)
498 1e3i_A Alcohol dehydrogenase, 36.5 40 0.0014 34.3 5.5 32 324-366 197-228 (376)
499 2zb4_A Prostaglandin reductase 36.4 41 0.0014 33.9 5.5 57 298-367 137-195 (357)
500 2zcu_A Uncharacterized oxidore 36.4 19 0.00064 34.3 2.8 96 325-444 1-104 (286)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=3e-204 Score=1647.34 Aligned_cols=540 Identities=41% Similarity=0.772 Sum_probs=526.7
Q ss_pred CccccccCCCCCcCCCCChHHhhhcCCCCCCCCccccHHHHHHHHHHHHhccccccCCCCCCCCchhHHHHHHHhhhccc
Q 007456 31 RGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRNE 110 (603)
Q Consensus 31 ~G~~ll~~p~~NKgtaFt~~ER~~l~l~GLlPp~v~tle~Q~~R~~~~~~~~~~~~~~~~~~~~~l~Ky~~L~~L~~rNe 110 (603)
+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||++||+|||
T Consensus 2 ~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~~L~~~Ne 71 (555)
T 1gq2_A 2 KGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLT----------SDLDRYILLMSLQDRNE 71 (555)
T ss_dssp CTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCC----------CHHHHHHHHHHHHHHCH
T ss_pred ChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCC----------CcHHHHHHHHHhcCcce
Confidence 69999999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred eeeeeeeccCccccCccccccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCceEEEEecCccccccCCCC
Q 007456 111 TLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLG 190 (603)
Q Consensus 111 ~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 190 (603)
+||||++++|++|+|||+||||||++|++||++||+|||+|||++|+|+++++++|||.++|+|||||||||||||||||
T Consensus 72 ~Lfy~ll~~~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G 151 (555)
T 1gq2_A 72 KLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLG 151 (555)
T ss_dssp HHHHHHHHHTHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCG
T ss_pred eeehhhHhhhHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccchhHHHHHHhcCCCCCceeeEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhC-CCeEEE
Q 007456 191 VQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW-PKAIVQ 269 (603)
Q Consensus 191 ~~GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~-P~~~Iq 269 (603)
++||||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+.+| |+++||
T Consensus 152 ~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~ 231 (555)
T 1gq2_A 152 CYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQ 231 (555)
T ss_dssp GGGGHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCccccchhHHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred eecCCCchHHHHHHHHhhcCCccccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHh
Q 007456 270 FEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (603)
Q Consensus 270 ~EDf~~~naf~iL~ryr~~~~~FnDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~ 349 (603)
||||+++|||+||+|||+++|||||||||||+|+|||||||+|++|++|+| |||||+|||+||+|||+||+++|+ +
T Consensus 232 ~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d---~riv~~GAGaAg~gia~ll~~~~~-~ 307 (555)
T 1gq2_A 232 FEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSD---HTVLFQGAGEAALGIANLIVMAMQ-K 307 (555)
T ss_dssp ECSCCHHHHHHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGG---CCEEEECCSHHHHHHHHHHHHHHH-H
T ss_pred ecccCCccHHHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHHHHHHHHH-H
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999999999 6
Q ss_pred cCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHH
Q 007456 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKA 429 (603)
Q Consensus 350 ~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~ 429 (603)
+|+|+|||++||||||++|||+++|++|+++|++||++.++ ..+|+|||+++|||||||+|++||+||+||||+
T Consensus 308 ~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~~------~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~ 381 (555)
T 1gq2_A 308 EGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCE------MKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQD 381 (555)
T ss_dssp HTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCC------CCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHH
T ss_pred cCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcCC------CCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHH
Confidence 79999999999999999999999998999999999998642 368999999999999999999999999999999
Q ss_pred hhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeccccccccccchhhHHHHHHhCCcc
Q 007456 430 MRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARF 509 (603)
Q Consensus 430 M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~ 509 (603)
|++ +|+|||||||||||++|||+||||++||+|+|||||||||+||+|++||+++||||||+|||||||||+++++|++
T Consensus 382 Ma~-~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~ 460 (555)
T 1gq2_A 382 MAA-FNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKH 460 (555)
T ss_dssp HHH-HCSSCEEEECCSSGGGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSS
T ss_pred HHh-cCCCCEEEECCCCCCccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeE
Confidence 975 9999999999999999999999999999999999999999999996699999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHHHHcCccCCCCCCCCCcCCCCCHHHHHHHHHh
Q 007456 510 ITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDLKHMSKEETVEYVTR 589 (603)
Q Consensus 510 Itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ir~Vs~~VA~AVa~~A~~~G~A~~~~~~~~~~~~~~~~~dl~~~i~~ 589 (603)
|||+|+++||++||+++++++++.+.|||+++++|+||.+||.||+++|+++|+|+. ...++|+++||++
T Consensus 461 Itd~M~~aAA~alA~~v~~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~----------~~~~~d~~~~i~~ 530 (555)
T 1gq2_A 461 IGDDVFLTTAEVIAQEVSEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTAST----------YPQPEDLEAFIRS 530 (555)
T ss_dssp CCHHHHHHHHHHHHHTCCHHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCC----------SSCCSSHHHHHHT
T ss_pred CCHHHHHHHHHHHHhccccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCC----------CCChHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999972 1225789999999
Q ss_pred CCccCCCCCCcc
Q 007456 590 SMWFPIYSPLVH 601 (603)
Q Consensus 590 ~mw~P~Y~~~v~ 601 (603)
+||+|+|+|++.
T Consensus 531 ~~~~P~Y~~~~~ 542 (555)
T 1gq2_A 531 QVYSTDYNCFVA 542 (555)
T ss_dssp TSCCCSCCCCSC
T ss_pred hccCCCCCCccc
Confidence 999999999864
No 2
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=3.9e-203 Score=1646.92 Aligned_cols=546 Identities=42% Similarity=0.764 Sum_probs=530.5
Q ss_pred CceeeccCccccccCCCCCcCCCCChHHhhhcCCCCCCCCccccHHHHHHHHHHHHhccccccCCCCCCCCchhHHHHHH
Q 007456 24 GPCMVHKRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILN 103 (603)
Q Consensus 24 ~~~~~~~~G~~ll~~p~~NKgtaFt~~ER~~l~l~GLlPp~v~tle~Q~~R~~~~~~~~~~~~~~~~~~~~~l~Ky~~L~ 103 (603)
.++.+..+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||+
T Consensus 31 ~~~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~ 100 (605)
T 1o0s_A 31 ERVTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQP----------NDLARYIQLD 100 (605)
T ss_dssp CCCCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSS----------SHHHHHHHHH
T ss_pred CccccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCC----------CcHHHHHHHH
Confidence 345566799999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred HhhhccceeeeeeeccCccccCccccccchHHHHHHHhhcccCCCccccccCCh--hhHHHHHhcCCCCCceEEEEecCc
Q 007456 104 RLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDK--GEMMSMIYNWPAQQVDMIVLTDGS 181 (603)
Q Consensus 104 ~L~~rNe~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~--g~i~~~l~nwp~~~v~viVVTDG~ 181 (603)
+||+|||+||||++++|++|+|||+||||||++|++||++||+|+|+|||++|+ |+++++++|||.++|+||||||||
T Consensus 101 ~L~~~Ne~Lfyrll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~ 180 (605)
T 1o0s_A 101 GLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGE 180 (605)
T ss_dssp HHHHHCHHHHHHHHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSS
T ss_pred HhhcccchhhhhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccc
Confidence 999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred cccccCCCCCCcccccchhHHHHHHhcCCCCCceeeEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHH
Q 007456 182 RILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHA 261 (603)
Q Consensus 182 rILGLGDlG~~GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~ 261 (603)
|||||||||++||||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+.
T Consensus 181 ~ILGLGD~G~~g~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~ 260 (605)
T 1o0s_A 181 RILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTK 260 (605)
T ss_dssp CBTTTBCCGGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHH
T ss_pred cceecCCCCCCcCcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hC-CCeEEEeecCCCchHHHHHHHHhhcCCccccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHH
Q 007456 262 RW-PKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLK 340 (603)
Q Consensus 262 ~~-P~~~Iq~EDf~~~naf~iL~ryr~~~~~FnDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~ 340 (603)
+| |+++||||||+++|||+||+|||+++|||||||||||+|+|||||||+|++|++|+| |||||+|||+||+|||+
T Consensus 261 ~fGp~~~I~~EDf~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d---~riv~~GAGaAgigia~ 337 (605)
T 1o0s_A 261 KYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQ---EKYLFFGAGAASTGIAE 337 (605)
T ss_dssp HHCTTCEEEECSCCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGG---CCEEEECCSHHHHHHHH
T ss_pred HhCCCcEeeHhhcCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHH
Confidence 99 999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCC
Q 007456 341 MAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGG 420 (603)
Q Consensus 341 li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g 420 (603)
||+++|+ ++|+|++||++||||||++|||+++|++|+++|++||++.++ ..+|+|||+.+|||||||+|++||
T Consensus 338 ll~~~m~-~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~~~A~~~~~------~~~L~eav~~vkpdVlIG~S~~~g 410 (605)
T 1o0s_A 338 MIVHQMQ-NEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAKDMPE------TTSILEVIRAARPGALIGASTVRG 410 (605)
T ss_dssp HHHHHHH-TTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTCBSSCC------CCCHHHHHHHHCCSEEEECSSCTT
T ss_pred HHHHHHH-HcCCChhhhhCeEEEEECCCceeCCCCCchHHHHHHHhhcCC------CCCHHHHHhhcCCCEEEEecCCCC
Confidence 9999999 789999999999999999999999998999999999998642 368999999999999999999999
Q ss_pred CCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeccccccccccchhhHH
Q 007456 421 VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGL 500 (603)
Q Consensus 421 ~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGigl 500 (603)
+||+||||+|++ +|+|||||||||||++|||+||||++||+|+|||||||||+||+|+ ||+++||||||+||||||||
T Consensus 411 ~ft~evv~~Ma~-~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~-Grs~~pnQ~NN~liFPGi~l 488 (605)
T 1o0s_A 411 AFNEEVIRAMAE-INERPIIFALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELN-GHTYKPGQGNNAYIFPGVAL 488 (605)
T ss_dssp CSCHHHHHHHHH-HCSSCEEEECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEET-TEEECCEECCGGGTHHHHHH
T ss_pred CCCHHHHHHHHh-cCCCCEEEECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeEC-CEEeccccccceeeccchhh
Confidence 999999999975 9999999999999999999999999999999999999999999995 99999999999999999999
Q ss_pred HHHHhCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHHHHcCccCCCCCCCCCcCCCCCH
Q 007456 501 GTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDLKHMSK 580 (603)
Q Consensus 501 G~~~~~a~~Itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ir~Vs~~VA~AVa~~A~~~G~A~~~~~~~~~~~~~~~~ 580 (603)
|+++++|++|||+|+++||+|||++++++++..+.|||+++++|+||.+||.||+++|+++|+|+. ...+
T Consensus 489 Gal~~~A~~Itd~M~~aAA~aLA~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~----------~~~~ 558 (605)
T 1o0s_A 489 GTILFQIRHVDNDLFLLAAKKVASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANL----------YPQP 558 (605)
T ss_dssp HHHHHTBSCCCHHHHHHHHHHHHHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCS----------SSCC
T ss_pred hhhhcCCeEcCHHHHHHHHHHHHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCC----------CCCh
Confidence 999999999999999999999999999999999999999999999999999999999999999972 1225
Q ss_pred HHHHHHHHhCCccCCCCCCcc
Q 007456 581 EETVEYVTRSMWFPIYSPLVH 601 (603)
Q Consensus 581 ~dl~~~i~~~mw~P~Y~~~v~ 601 (603)
+|+++||+++||+|+|+|++.
T Consensus 559 ~d~~~~i~~~~w~P~Y~~~~~ 579 (605)
T 1o0s_A 559 EDLEKYVRAQVYNTEYEELIN 579 (605)
T ss_dssp SCHHHHHHHHSCCCSCCCCSC
T ss_pred HHHHHHHHHhccCCCCCcccc
Confidence 789999999999999999864
No 3
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=6.7e-203 Score=1641.12 Aligned_cols=543 Identities=41% Similarity=0.765 Sum_probs=528.0
Q ss_pred cCccccccCCCCCcCCCCChHHhhhcCCCCCCCCccccHHHHHHHHHHHHhccccccCCCCCCCCchhHHHHHHHhhhcc
Q 007456 30 KRGTDILHDPWFNKDTGFPLTERDRLGLRGLLPPRVISFEQQYARFMESFRSLEKNTEGQPNKVVSLAKWRILNRLHDRN 109 (603)
Q Consensus 30 ~~G~~ll~~p~~NKgtaFt~~ER~~l~l~GLlPp~v~tle~Q~~R~~~~~~~~~~~~~~~~~~~~~l~Ky~~L~~L~~rN 109 (603)
.+|.++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++ ++|+||+||++||+||
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~----------~~l~k~~~L~~L~~~N 72 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMT----------SPLEKYIYIMGIQERN 72 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCC----------SHHHHHHHHHHHHTTC
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCC----------CcHHHHHHHHHhhccc
Confidence 579999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred ceeeeeeeccCccccCccccccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCceEEEEecCccccccCCC
Q 007456 110 ETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDL 189 (603)
Q Consensus 110 e~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDl 189 (603)
|+||||++++|++|+|||+||||||++|++||++||+|+|+|||++|+++++++|+|||.++|+||||||||||||||||
T Consensus 73 e~Lfy~ll~~~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~ 152 (564)
T 1pj3_A 73 EKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDL 152 (564)
T ss_dssp HHHHHHHHHHCHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCC
T ss_pred ceeehhhhhhCHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccchhHHHHHHhcCCCCCceeeEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhC-CCeEE
Q 007456 190 GVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW-PKAIV 268 (603)
Q Consensus 190 G~~GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~-P~~~I 268 (603)
|++||+|||||++|||+||||||++|||||||+||||++||+||+||||||+|++|++||+|+||||++|+++| |+++|
T Consensus 153 G~~gm~ipvGKl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I 232 (564)
T 1pj3_A 153 GVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLI 232 (564)
T ss_dssp GGGGGHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCCcccceehHHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 89999
Q ss_pred EeecCCCchHHHHHHHHhhcCCccccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHH
Q 007456 269 QFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (603)
Q Consensus 269 q~EDf~~~naf~iL~ryr~~~~~FnDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~ 348 (603)
|||||+++|||+||+|||+++|||||||||||+|+|||||||+|++|++|+| |||||+|||+||+|||+||+++|+
T Consensus 233 ~~EDf~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d---~riv~~GAGaAgigia~ll~~~m~- 308 (564)
T 1pj3_A 233 QFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISE---HKILFLGAGEAALGIANLIVMSMV- 308 (564)
T ss_dssp EECSCCHHHHHHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGG---CCEEEECCSHHHHHHHHHHHHHHH-
T ss_pred eehhcCCccHHHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhH---cEEEEeCCCHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHH
Q 007456 349 MAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVL 427 (603)
Q Consensus 349 ~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv 427 (603)
++|+|+|||++||||||++|||+++| ++|+++|++||++.+++ ...+|+|||+++|||||||+|++||+||+|||
T Consensus 309 ~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~----~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv 384 (564)
T 1pj3_A 309 ENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPES----IPDTFEDAVNILKPSTIIGVAGAGRLFTPDVI 384 (564)
T ss_dssp HTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSS----CCSSHHHHHHHHCCSEEEECCCSSCCSCHHHH
T ss_pred HcCCChHHhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCcc----ccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHH
Confidence 68999999999999999999999999 78999999999987542 13689999999999999999999999999999
Q ss_pred HHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeccccccccccchhhHHHHHHhCC
Q 007456 428 KAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGA 507 (603)
Q Consensus 428 ~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a 507 (603)
|+|++ +|+|||||||||||++|||+||||++||+|+|||||||||+||+|++||+++||||||+|||||||||+++++|
T Consensus 385 ~~Ma~-~~~~PIIFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A 463 (564)
T 1pj3_A 385 RAMAS-INERPVIFALSNPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNT 463 (564)
T ss_dssp HHHHH-HCSSCEEEECCSSGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTC
T ss_pred HHHHh-cCCCCEEEECCCCCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCC
Confidence 99975 99999999999999999999999999999999999999999999955999999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHHHHcCccCCCCCCCCCcCCCCCHHHHHHHH
Q 007456 508 RFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDLKHMSKEETVEYV 587 (603)
Q Consensus 508 ~~Itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ir~Vs~~VA~AVa~~A~~~G~A~~~~~~~~~~~~~~~~~dl~~~i 587 (603)
++|||+|+++||++||++++++++..+.|||+++++|+||.+||.||+++|+++|+|+. ...++|+++||
T Consensus 464 ~~Itd~M~~aAA~aLA~~v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~----------~~~~~d~~~~i 533 (564)
T 1pj3_A 464 RHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFR----------YPEPEDKAKYV 533 (564)
T ss_dssp SCCCHHHHHHHHHHHHTTCCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCC----------SSCCSSHHHHH
T ss_pred eECCHHHHHHHHHHHHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCC----------CCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999972 12357899999
Q ss_pred HhCCccCCCCCCcc
Q 007456 588 TRSMWFPIYSPLVH 601 (603)
Q Consensus 588 ~~~mw~P~Y~~~v~ 601 (603)
+++||+|.|++++.
T Consensus 534 ~~~~~~p~Y~~~~~ 547 (564)
T 1pj3_A 534 KERTWRSEYDSLLP 547 (564)
T ss_dssp HHTCCCCSCCCCCC
T ss_pred HHHhhCCCCCCccc
Confidence 99999999999864
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=1.8e-122 Score=989.92 Aligned_cols=396 Identities=25% Similarity=0.364 Sum_probs=361.5
Q ss_pred hhccceeeeeeeccCccccCccccccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCceEEEEecCccccc
Q 007456 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (603)
Q Consensus 106 ~~rNe~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILG 185 (603)
..+-+.. -++.+++.++ |||+||||||++|++|+ +|++++++++.+| ++|+||||||||||
T Consensus 44 ~GKi~v~-~~~~~~~~~d-LslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILG 104 (487)
T 3nv9_A 44 KGKIQIM-PKCTLAGFNW-FNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLG 104 (487)
T ss_dssp TSSEEEE-ECSCCSSGGG-HHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGG
T ss_pred CCeEEEE-ecCCCCCHHH-CeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeee
Confidence 5565444 7788889888 79999999999999998 6899998888877 58999999999999
Q ss_pred cCCCCC-CcccccchhHHHHHHhcCCCCCceeeEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCC
Q 007456 186 LGDLGV-QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (603)
Q Consensus 186 LGDlG~-~GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P 264 (603)
|||+|+ +||||||||++|||+||||| |||||||+||+| +++| +||||++|+++||
T Consensus 105 LGDiG~~agmpImeGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d-------------------~defve~v~~~~P 160 (487)
T 3nv9_A 105 DGDVTPPGGLGVMEGKALLMKYLGGID---AVPICIDSKNKE--GKND-------------------PDAVIEFVQRIQH 160 (487)
T ss_dssp GBCCCGGGGHHHHHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBC-------------------HHHHHHHHHHHGG
T ss_pred ccccccccCCchhhhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCC-------------------HHHHHHHHHHhCC
Confidence 999999 79999999999999999999 999999999866 4677 5999999999999
Q ss_pred Ce-EEEeecCCCchHHHHHHHHhh--cCCccccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHH
Q 007456 265 KA-IVQFEDFQMKWAFETLERYRK--RFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 341 (603)
Q Consensus 265 ~~-~Iq~EDf~~~naf~iL~ryr~--~~~~FnDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~l 341 (603)
++ .||||||+++|||+||+|||+ .+|||||||||||+|+|||||||+|++|++|+| |||||+|||+||+|||+|
T Consensus 161 ~fG~InlEDf~ap~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d---~riV~~GAGaAGigia~l 237 (487)
T 3nv9_A 161 TFGAINLEDISQPNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHE---CRMVFIGAGSSNTTCLRL 237 (487)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGG---CCEEEECCSHHHHHHHHH
T ss_pred CCCeecHhhcCCchHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhh---cEEEEECCCHHHHHHHHH
Confidence 99 999999999999999999999 479999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCC-----hhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec
Q 007456 342 AVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD-----PAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS 416 (603)
Q Consensus 342 i~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~-----~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S 416 (603)
|+. .|+++ +||||+|++|||+++|++|+ ++|.+||++.+. ....+|+|||++ +|||||+|
T Consensus 238 l~~-----~G~~~----~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~----~~~~~L~eav~~--adVlIG~S 302 (487)
T 3nv9_A 238 IVT-----AGADP----KKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNP----SKFGSIAEACVG--ADVLISLS 302 (487)
T ss_dssp HHH-----TTCCG----GGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCT----TCCCSHHHHHTT--CSEEEECC
T ss_pred HHH-----cCCCc----ccEEEEeccccccCCcchhhhhcccHHHHHHHHhccc----ccCCCHHHHHhc--CCEEEEec
Confidence 975 58986 89999999999999997774 466788886532 135799999999 69999999
Q ss_pred CC-CCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeccccccccccc
Q 007456 417 GV-GGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLF 495 (603)
Q Consensus 417 ~~-~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iF 495 (603)
++ ||+||+||||+|+ +|||||||||||+ ||+||||++ +|+|||||| |+++||||||+|+|
T Consensus 303 ~~~pg~ft~e~V~~Ma----~~PIIFaLSNPtp--Ei~pe~A~~--~G~aIvATG-----------rsd~PnQ~NN~liF 363 (487)
T 3nv9_A 303 TPGPGVVKAEWIKSMG----EKPIVFCCANPVP--EIYPYEAKE--AGAYIVATG-----------RGDFPNQVNNSVGF 363 (487)
T ss_dssp CSSCCCCCHHHHHTSC----SSCEEEECCSSSC--SSCHHHHHH--TTCSEEEES-----------CTTSSSBCCGGGTH
T ss_pred ccCCCCCCHHHHHhhc----CCCEEEECCCCCc--cCCHHHHHH--hCCEEEEEC-----------CCCCcccCcceeEc
Confidence 76 7999999999994 7999999999998 999999998 699999995 67789999999999
Q ss_pred hhhHHHHHHhCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHHHHcCccCCCCCCCCCcC
Q 007456 496 PGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDL 575 (603)
Q Consensus 496 PGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ir~Vs~~VA~AVa~~A~~~G~A~~~~~~~~~~~ 575 (603)
||||+|+++++|++|||+|+++||++||++++++++..++|||++++ ++||.+||.||+++|+++|+|+.
T Consensus 364 PGI~~Gal~~~A~~Itd~M~~AAA~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~--------- 433 (487)
T 3nv9_A 364 PGILKGALIVRARKITDNMAIAASRALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARV--------- 433 (487)
T ss_dssp HHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSC---------
T ss_pred chhhHHHHHcCCcccCHHHHHHHHHHHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCC---------
Confidence 99999999999999999999999999999999999999999999999 57999999999999999999982
Q ss_pred CCCCHHHHHHHHHhCC
Q 007456 576 KHMSKEETVEYVTRSM 591 (603)
Q Consensus 576 ~~~~~~dl~~~i~~~m 591 (603)
...+++++.+++++++
T Consensus 434 ~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 434 TDLTWQQVYDIAEHDI 449 (487)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 1145788888888764
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=1.4e-113 Score=911.83 Aligned_cols=368 Identities=30% Similarity=0.453 Sum_probs=339.5
Q ss_pred hhccceeeeeeeccCccccCccccccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCceEEEEecCccccc
Q 007456 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (603)
Q Consensus 106 ~~rNe~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILG 185 (603)
..+- .+++++.+++.++ |||+||||||++|++|+ +|+++++ +|+.++++|+|||||+||||
T Consensus 19 ~gk~-~~~~~~~~~~~~~-l~i~YtP~V~~~c~~i~-------------~~p~~v~----~~t~~~~~V~VvTdG~~iLG 79 (398)
T 2a9f_A 19 GGKL-EVQPKVDIKTKHD-LSIAYTPGVASVSSAIA-------------KDKTLAY----DLTTKKNTVAVISDGTAVLG 79 (398)
T ss_dssp TSSE-EEEESSCCSSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHH----HHSGGGTEEEEEECSSSCTT
T ss_pred CCeE-EEEEecccCCHHH-CeEEECchHHHHHHHHH-------------hCHHHHH----HhcccCCEEEEEECCccccC
Confidence 4553 5679999999855 79999999999999998 4787776 56778899999999999999
Q ss_pred cCCCCCC-cccccchhHHHHHHhcCCCCCceeeEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCC
Q 007456 186 LGDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (603)
Q Consensus 186 LGDlG~~-GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P 264 (603)
|||+|++ |||||+||+.||++||||| |+|||||+|| +||||++|+++||
T Consensus 80 LGD~G~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~p 129 (398)
T 2a9f_A 80 LGDIGPEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALAP 129 (398)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHGG
T ss_pred CCCcccccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcCC
Confidence 9999996 9999999999999999999 9999999985 7999999999999
Q ss_pred Ce-EEEeecCCCchHHHHHHHHhhc--CCccccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHH
Q 007456 265 KA-IVQFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 341 (603)
Q Consensus 265 ~~-~Iq~EDf~~~naf~iL~ryr~~--~~~FnDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~l 341 (603)
++ .||||||+++|||++|+|||++ +|||||||||||+|++||++||+|++|++++| +||||+|||+||+|||++
T Consensus 130 ~F~~I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d---~kVVi~GAGaAG~~iA~l 206 (398)
T 2a9f_A 130 TFGGINLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDE---VSIVVNGGGSAGLSITRK 206 (398)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTS---CEEEEECCSHHHHHHHHH
T ss_pred ceeEeccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCc---cEEEEECCCHHHHHHHHH
Confidence 95 9999999999999999999998 99999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHhcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCC
Q 007456 342 AVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGG 420 (603)
Q Consensus 342 i~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g 420 (603)
++.+ |. ++||++|++|||+++| ++|+++|++||++.+.. ....+|+|+|+. +|+|||+|+ ||
T Consensus 207 l~~~-----Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~---~~~~~L~eav~~--ADV~IG~Sa-pg 269 (398)
T 2a9f_A 207 LLAA-----GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNRE---FKSGTLEDALEG--ADIFIGVSA-PG 269 (398)
T ss_dssp HHHH-----TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCT---TCCCSCSHHHHT--TCSEEECCS-TT
T ss_pred HHHc-----CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcc---cchhhHHHHhcc--CCEEEecCC-CC
Confidence 9985 54 7999999999999999 88999999999975432 135789999999 799999998 99
Q ss_pred CCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeccccccccccchhhHH
Q 007456 421 VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGL 500 (603)
Q Consensus 421 ~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGigl 500 (603)
+||+|+|++|+ ++||||||||||+ ||+||||++| |+||||| ||+++|||+||+|+|||||+
T Consensus 270 l~T~EmVk~Ma----~~pIIfalsNPt~--E~~pe~a~~~--g~~i~at-----------Grs~~p~Q~NN~~~FPgi~~ 330 (398)
T 2a9f_A 270 VLKAEWISKMA----ARPVIFAMANPIP--EIYPDEALEA--GAYIVGT-----------GRSDFPNQINNVLAFPGIFR 330 (398)
T ss_dssp CCCHHHHHTSC----SSCEEEECCSSSC--SSCHHHHHTT--TCSEEEE-----------SCTTSSSBCCGGGTHHHHHH
T ss_pred CCCHHHHHhhC----CCCEEEECCCCCc--cCCHHHHHHh--CCeEEEe-----------CCCCCCCcCCceeEcchHHH
Confidence 99999999995 7999999999997 9999999999 9999999 58899999999999999999
Q ss_pred HHHHhCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHHHHcC
Q 007456 501 GTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEED 562 (603)
Q Consensus 501 G~~~~~a~~Itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ir~Vs~~VA~AVa~~A~~~G 562 (603)
|+++++|++|||+|+++||++||++++++++..++|||++++ |+||.+||.||+++|+++.
T Consensus 331 Gal~~~a~~I~d~m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~~ 391 (398)
T 2a9f_A 331 GALDARAKTITVEMQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKSE 391 (398)
T ss_dssp HHHHHTCSSCCHHHHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC---
T ss_pred HHHHcCCcCCCHHHHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999 8999999999999998643
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=1.1e-107 Score=865.43 Aligned_cols=360 Identities=26% Similarity=0.399 Sum_probs=335.0
Q ss_pred hhccceeeeeeeccCccccCccccccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCceEEEEecCccccc
Q 007456 106 HDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILG 185 (603)
Q Consensus 106 ~~rNe~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILG 185 (603)
..+- .+++++.+++.++ |||+||||||++|++|+ .|+++++ +|+.++++|+|||||+||||
T Consensus 23 ~gk~-~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~-------------~~p~~v~----~~t~~~~~V~VvTdg~~vLG 83 (388)
T 1vl6_A 23 KGKI-RTALPVEKVDRET-LSLLYTPGVADVARACA-------------EDPEKTY----VYTSRWNTVAVVSDGSAVLG 83 (388)
T ss_dssp TCSC-EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH-------------HCGGGHH----HHSGGGGEEEEEECSTTBTT
T ss_pred CCeE-EEEEeeecCCHHH-CeEEECchHHHHHHHHH-------------hCHHHHH----hhcccCCeEEEEECCccccC
Confidence 4553 5779999999977 79999999999999998 3677666 57778899999999999999
Q ss_pred cCCCCCC-cccccchhHHHHHHhcCCCCCceeeEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCC
Q 007456 186 LGDLGVQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWP 264 (603)
Q Consensus 186 LGDlG~~-GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P 264 (603)
|||+|++ |||||+||+.||++||||| |+|||||+|| +||||++|+++||
T Consensus 84 lGD~G~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~p 133 (388)
T 1vl6_A 84 LGNIGPYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLEP 133 (388)
T ss_dssp TBSCCHHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTGG
T ss_pred CCccccccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcCC
Confidence 9999996 9999999999999999999 9999999985 7999999999999
Q ss_pred Ce-EEEeecCCCchHHHHHHHHhhc--CCccccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHH
Q 007456 265 KA-IVQFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKM 341 (603)
Q Consensus 265 ~~-~Iq~EDf~~~naf~iL~ryr~~--~~~FnDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~l 341 (603)
++ .||||||+++|||++|+|||++ +|||||||||||+|++||+++|+|++|++++| +||||+|||+||+++|++
T Consensus 134 ~f~~i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~---~kVVv~GAGaAG~~iAkl 210 (388)
T 1vl6_A 134 SFGGINLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEE---VKVVVNGIGAAGYNIVKF 210 (388)
T ss_dssp GCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTT---CEEEEECCSHHHHHHHHH
T ss_pred cceEeCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCC---cEEEEECCCHHHHHHHHH
Confidence 95 9999999999999999999997 99999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCC--CChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCC
Q 007456 342 AVQAAARMAGNNDAFARNKFFLLDKDGLITKERKN--LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG 419 (603)
Q Consensus 342 i~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~--l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~ 419 (603)
++.+ |. ++||++|++|||+.+|.+ |+++|++||++.... ....+|.|+|+. +|+|||+|+ |
T Consensus 211 l~~~-----G~------~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~---~~~~~L~eav~~--ADVlIG~Sa-p 273 (388)
T 1vl6_A 211 LLDL-----GV------KNVVAVDRKGILNENDPETCLNEYHLEIARITNPE---RLSGDLETALEG--ADFFIGVSR-G 273 (388)
T ss_dssp HHHH-----TC------CEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT---CCCSCHHHHHTT--CSEEEECSC-S
T ss_pred HHhC-----CC------CeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc---CchhhHHHHHcc--CCEEEEeCC-C
Confidence 9875 42 799999999999999976 999999999975432 235789999999 799999999 8
Q ss_pred CCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeccccccccccchhhH
Q 007456 420 GVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIG 499 (603)
Q Consensus 420 g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGig 499 (603)
|+||+|+|+.|+ ++||||+|||||+ ||+||||++| |+||||| ||+++|||+||+|+|||||
T Consensus 274 ~l~t~emVk~Ma----~~pIIfalSNPt~--E~~p~~a~~~--g~~i~at-----------Gr~~~p~Q~NN~~~FPgi~ 334 (388)
T 1vl6_A 274 NILKPEWIKKMS----RKPVIFALANPVP--EIDPELAREA--GAFIVAT-----------GRSDHPNQVNNLLAFPGIM 334 (388)
T ss_dssp SCSCHHHHTTSC----SSCEEEECCSSSC--SSCHHHHHHT--TCSEEEE-----------SCTTSSSBCCGGGTHHHHH
T ss_pred CccCHHHHHhcC----CCCEEEEcCCCCC--CCCHHHHHHh--cCeEEEe-----------CCCCCCCcCCceeEcchHh
Confidence 999999999994 7999999999996 9999999999 9999999 5889999999999999999
Q ss_pred HHHHHhCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHH
Q 007456 500 LGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAA 558 (603)
Q Consensus 500 lG~~~~~a~~Itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ir~Vs~~VA~AVa~~A 558 (603)
+|+++++|+ |||+|+++||++||+++ ++..++|||++++ |+||.+||.||+++|
T Consensus 335 ~Gal~~~a~-i~~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 335 KGAVEKRSK-ITKNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp HHHHHHCSC-CCHHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred HHHHhcCCc-cCHHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 999999999 99999999999999999 6788999999999 999999999999875
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=2.9e-86 Score=713.15 Aligned_cols=388 Identities=28% Similarity=0.441 Sum_probs=352.8
Q ss_pred eeeeeeeccCccccCccccccchHHHHHHHhhcccCCCccccccCChhhHHHHHhcCCCCCceEEEEecCccccccCCCC
Q 007456 111 TLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLG 190 (603)
Q Consensus 111 ~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~~~r~prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 190 (603)
..++++.+++.++ |||+||||||++|++|+ +|++++++ |+.++++++|||||+|||||||+|
T Consensus 21 ~~~~~~~~~~~~~-l~~~YtP~v~~~c~~~~-------------~~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 21 EVIPKVSLESREE-LTLAYTPGVAEPCKEIA-------------RDPGKVYE----YTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp EEEESSCCCSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHHH----HSSGGGEEEEEECSTTBTTTBCCC
T ss_pred EEEEeeccCCHHH-CeeEECchhHHHHHHHH-------------HCHHHHHh----hcccCcEEEEEECCCeEeccccee
Confidence 4679999999866 79999999999999998 48998886 666889999999999999999999
Q ss_pred CC-cccccchhHHHHHHhcCCCCCceeeEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCCCe-EE
Q 007456 191 VQ-GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKA-IV 268 (603)
Q Consensus 191 ~~-GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~-~I 268 (603)
.+ ++|+++||++||++||||| ++|++||+ +| +|||+++|+.++|++ +|
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv--------~d-------------------~de~~~~v~~l~~~f~Gi 132 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVD---AFPIMIKE--------QE-------------------PNKFIDIVKAIAPTFGGI 132 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSC--------CS-------------------HHHHHHHHHHTGGGCSEE
T ss_pred ccccCHHHHHHHHHHHHhCCCC---Ceeeeeec--------CC-------------------HHHHHHHHHHhCccCcEE
Confidence 95 9999999999999999999 99999999 34 699999999999996 99
Q ss_pred EeecCCCchHHHHHHHHhhc--CCccccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHH
Q 007456 269 QFEDFQMKWAFETLERYRKR--FCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAA 346 (603)
Q Consensus 269 q~EDf~~~naf~iL~ryr~~--~~~FnDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~ 346 (603)
|||||+.||||++|++|++. +||||||+||||.+.++|+++|++.+|+++++ +|+||+|||+||.+|+.+|.++
T Consensus 133 nvED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~---~rvlvlGAGgAg~aia~~L~~~- 208 (439)
T 2dvm_A 133 NLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISE---ITLALFGAGAAGFATLRILTEA- 208 (439)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTT---CCEEEECCSHHHHHHHHHHHHT-
T ss_pred EEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccC---CEEEEECccHHHHHHHHHHHHc-
Confidence 99999999999999999985 89999999999999999999999999999999 9999999999999999999763
Q ss_pred HHhcCCChhhhcCeEEEEe----cCCcccCCCCC---CChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCC
Q 007456 347 ARMAGNNDAFARNKFFLLD----KDGLITKERKN---LDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG 419 (603)
Q Consensus 347 ~~~~Gls~~eA~~~i~lvD----~~GLv~~~r~~---l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~ 419 (603)
|.++ ++||++| ++||+++. ++ |.++|++|++..... ....+|.|+++. +|+|||+|+.+
T Consensus 209 ----G~~~----~~I~vvd~~~~R~G~~~~a-~~~~~L~~~~~~~a~~~~~~---~~~~~L~e~l~~--aDVlInaT~~~ 274 (439)
T 2dvm_A 209 ----GVKP----ENVRVVELVNGKPRILTSD-LDLEKLFPYRGWLLKKTNGE---NIEGGPQEALKD--ADVLISFTRPG 274 (439)
T ss_dssp ----TCCG----GGEEEEEEETTEEEECCTT-SCHHHHSTTCHHHHTTSCTT---CCCSSHHHHHTT--CSEEEECSCCC
T ss_pred ----CCCc----CeEEEEEccCCCcCccccc-cchhHHHHHHHHHhhccccc---cccccHHHHhcc--CCEEEEcCCCc
Confidence 7653 6899999 99999987 45 788888888753210 123579999987 79999999975
Q ss_pred -CCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeccccccccccchhh
Q 007456 420 -GVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGI 498 (603)
Q Consensus 420 -g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGi 498 (603)
|.|++++++.|+ ++||||+||||++ ||++++|.+| |++++|| |+++.|+|+||+|+||||
T Consensus 275 ~G~~~~e~v~~m~----~~~iVfDLynP~~--t~~~~~A~~~--G~~ivat-----------G~~ml~~Q~nn~~~FPGi 335 (439)
T 2dvm_A 275 PGVIKPQWIEKMN----EDAIVFPLANPVP--EILPEEAKKA--GARIVAT-----------GRSDYPNQINNLLGFPGI 335 (439)
T ss_dssp SSSSCHHHHTTSC----TTCEEEECCSSSC--SSCHHHHHHH--TCSEECB-----------SCSSSSSBCCGGGTHHHH
T ss_pred cCCCChHHHHhcC----CCCEEEECCCCCC--cchHHHHHHc--CCeEEcC-----------CCchhHHHHHHHhcccCc
Confidence 999999999994 7999999999997 9999999998 8899998 588999999999999999
Q ss_pred HHHHHHhCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHHHHHHHHHHHcCccCCCCCCCCCcCCCC
Q 007456 499 GLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAEGHGEVGPRDLKHM 578 (603)
Q Consensus 499 glG~~~~~a~~Itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ir~Vs~~VA~AVa~~A~~~G~A~~~~~~~~~~~~~~ 578 (603)
|+|+++++|++|||+|+++||++||++++++ ..++|||++++ |+||.+||.||+++|+++|+|+. +.
T Consensus 336 ~~g~l~~~a~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~----------~~ 402 (439)
T 2dvm_A 336 FRGALDVRARTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVART----------KV 402 (439)
T ss_dssp HHHHHHTTCSCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSS----------CC
T ss_pred hHHHHhcCCCCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCC----------CC
Confidence 9999999999999999999999999999866 78999999999 99999999999999999999972 34
Q ss_pred CHHHHHHHHHhCCccCCC
Q 007456 579 SKEETVEYVTRSMWFPIY 596 (603)
Q Consensus 579 ~~~dl~~~i~~~mw~P~Y 596 (603)
.++|+.+|+++.||.+.|
T Consensus 403 ~~~~~~~~~~~~~~~~~~ 420 (439)
T 2dvm_A 403 KGEWVEEHTIRLIEFYEN 420 (439)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhhhhHH
Confidence 578899999999998764
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.75 E-value=4.9e-08 Score=105.35 Aligned_cols=169 Identities=20% Similarity=0.229 Sum_probs=122.1
Q ss_pred CChhhhhHhHHHHHHHHHHhCCCeEEEeecCCCchHHHHH---------------------HHHhh-------cCCcc--
Q 007456 243 LEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETL---------------------ERYRK-------RFCMF-- 292 (603)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~P~~~Iq~EDf~~~naf~iL---------------------~ryr~-------~~~~F-- 292 (603)
-+.|||+..++..+.+ ....|+..| |-+..=...+. .||+. .+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~-~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~v 187 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV-EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNV 187 (435)
T ss_dssp CCHHHHHHHHHHHHCB-TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEEC
T ss_pred CCHHHHHHHHHHHHhc-cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEEe
Confidence 3667888888876642 112366555 44443333222 34443 27999
Q ss_pred --------ccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEE
Q 007456 293 --------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLL 364 (603)
Q Consensus 293 --------nDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lv 364 (603)
.|++.||+-++++|+..+ ++..+.. .+++|+|+|..|.++|+.+... |. +++.+
T Consensus 188 nds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~G---ktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~ 249 (435)
T 3gvp_A 188 NDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGG---KQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVT 249 (435)
T ss_dssp TTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEE
T ss_pred cchhhhhhhhhhhhhHHHHHHHHHHh---hCceecC---CEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEE
Confidence 899999999999999765 6888888 9999999999999999888653 43 68888
Q ss_pred ecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 007456 365 DKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 365 D~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LS 444 (603)
|++. .+...|.... ....+|.|+++. .|++|.+++..+.++++.++.|. +..||+-.+
T Consensus 250 D~dp-----------~ra~~A~~~G-----~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK----~gailINvg 307 (435)
T 3gvp_A 250 EIDP-----------ICALQACMDG-----FRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK----NSCIVCNMG 307 (435)
T ss_dssp CSCH-----------HHHHHHHHTT-----CEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC----TTEEEEECS
T ss_pred eCCh-----------hhhHHHHHcC-----CEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC----CCcEEEEec
Confidence 8642 1112222110 013579999987 79999998888999999999994 688999999
Q ss_pred CCCCccCCCHHHH
Q 007456 445 NPTMNAECTAADA 457 (603)
Q Consensus 445 NPt~~aE~tpeda 457 (603)
++.. |+..+..
T Consensus 308 rg~~--EId~~~L 318 (435)
T 3gvp_A 308 HSNT--EIDVASL 318 (435)
T ss_dssp STTT--TBTGGGG
T ss_pred CCCc--cCCHHHH
Confidence 9977 7877655
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.74 E-value=2.5e-08 Score=107.78 Aligned_cols=129 Identities=19% Similarity=0.243 Sum_probs=102.9
Q ss_pred CCcc----------ccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhc
Q 007456 289 FCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFAR 358 (603)
Q Consensus 289 ~~~F----------nDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~ 358 (603)
+|+| .|++.||+-+++.|++. .++..+.. .+++|+|.|..|.++|+.+..+ |.
T Consensus 173 iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~G---ktVgIiG~G~IG~~vA~~Lka~-----Ga------ 235 (436)
T 3h9u_A 173 IPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAG---KTACVCGYGDVGKGCAAALRGF-----GA------ 235 (436)
T ss_dssp SCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------
T ss_pred CceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccC---CEEEEEeeCHHHHHHHHHHHHC-----CC------
Confidence 8999 89999999999999964 56888888 9999999999999999988764 43
Q ss_pred CeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCC
Q 007456 359 NKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKP 438 (603)
Q Consensus 359 ~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erP 438 (603)
+++++|++ +.+...|.... ....+|.|+++. .|++|.+++..+.++++.++.|. +..
T Consensus 236 -~Viv~D~~-----------p~~a~~A~~~G-----~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK----~gA 292 (436)
T 3h9u_A 236 -RVVVTEVD-----------PINALQAAMEG-----YQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR----DDA 292 (436)
T ss_dssp -EEEEECSC-----------HHHHHHHHHTT-----CEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC----TTE
T ss_pred -EEEEECCC-----------hhhhHHHHHhC-----CeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC----CCc
Confidence 68888873 22222222110 023579999987 89999888878999999999994 689
Q ss_pred eEEecCCCCCccCCCHHHHhc
Q 007456 439 AIFAMSNPTMNAECTAADAFK 459 (603)
Q Consensus 439 IIF~LSNPt~~aE~tpeda~~ 459 (603)
||+-.|++.. |+.++++.+
T Consensus 293 IVINvgRg~v--EID~~~L~~ 311 (436)
T 3h9u_A 293 IVCNIGHFDT--EIQVAWLKA 311 (436)
T ss_dssp EEEECSSSGG--GBCHHHHHH
T ss_pred EEEEeCCCCC--ccCHHHHHh
Confidence 9999999987 899987765
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.34 E-value=9.3e-07 Score=94.08 Aligned_cols=227 Identities=17% Similarity=0.259 Sum_probs=133.8
Q ss_pred CChhhHHHHHhcCCCCCceEEEEecCccccccCCCCCC--cccccchhHHHHHHhcCCCCCceeeEEeeccCCchhcccC
Q 007456 155 KDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQ--GIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLED 232 (603)
Q Consensus 155 ~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~D 232 (603)
-+++.+.++... ..+|+|.++++..+|++|.+.. |..|+.+ ..+|. | +++|.+. +
T Consensus 25 ltP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk--------~ 81 (401)
T 1x13_A 25 ATPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVN--------A 81 (401)
T ss_dssp CCHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSS--------C
T ss_pred CCHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeC--------C
Confidence 466777777774 4689999999999999999973 9999988 66775 1 5677662 3
Q ss_pred cccccccccCCChhhhhHhHHHHHHHHHHhCCCe-EEEeecCCCchHHHHHHHHhhc-CCccc-cCC------c----hh
Q 007456 233 RLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR-FCMFN-DDI------Q----GT 299 (603)
Q Consensus 233 P~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~-~Iq~EDf~~~naf~iL~ryr~~-~~~Fn-DDi------Q----GT 299 (603)
| .++.++. .-|+. +|.+=..+.. -.+++.++++ +.+|+ +.+ | .+
T Consensus 82 p------------------~~~~i~~---l~~~~~li~~~~~~~d--~~~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~ 138 (401)
T 1x13_A 82 P------------------LDDEIAL---LNPGTTLVSFIWPAQN--PELMQKLAERNVTVMAMDSVPRISRAQSLDALS 138 (401)
T ss_dssp C------------------CHHHHTT---CCTTCEEEECCCGGGC--HHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHH
T ss_pred C------------------CHHHHHH---hcCCCcEEEEecCCCC--HHHHHHHHHCCCEEEEeehhhhhhhhcccchHH
Confidence 3 1233322 22443 5544443332 2355666554 66663 222 2 45
Q ss_pred HHHHHHHHHHHHHHh----CCCC-------CCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 300 AGVALAGLLGTVRAQ----GLSL-------TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 300 aaV~lAgll~A~r~t----g~~l-------~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
....+|| .+|++.. ++.. .+|...+|+|+|+|.+|.++++.+... |. +++.+|++.
T Consensus 139 ~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~~~ 205 (401)
T 1x13_A 139 SMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDTRP 205 (401)
T ss_dssp HHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCG
T ss_pred HHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCH
Confidence 5556665 3344432 2210 023349999999999999999877553 42 588899864
Q ss_pred cccCCCCCCC-------h-----hhhccccccCC-cCCcccCCCHHHHhcccCCcEEEeecCCC-----CCCCHHHHHHh
Q 007456 369 LITKERKNLD-------P-----AAAPFAKDPGD-FMGLREGASLLEVVRKVKPHVLLGLSGVG-----GVFNEEVLKAM 430 (603)
Q Consensus 369 Lv~~~r~~l~-------~-----~k~~fa~~~~~-~~~~~~~~~L~e~V~~vkptvLIG~S~~~-----g~Ft~evv~~M 430 (603)
-..+....+. . .+-.|++...+ +. .....+|.+.++. .|++|++...| .+++++.++.|
T Consensus 206 ~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~m 282 (401)
T 1x13_A 206 EVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFI-KAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSM 282 (401)
T ss_dssp GGHHHHHHTTCEECCC--------CCHHHHHHSHHHH-HHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTS
T ss_pred HHHHHHHHcCCEEEEecccccccccccchhhccHHHH-HHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcC
Confidence 3211000010 0 00001110000 00 0001147788876 79999985443 67999999999
Q ss_pred hhcCCCCCeEEecCCCC
Q 007456 431 RESDSVKPAIFAMSNPT 447 (603)
Q Consensus 431 ~~~~~erPIIF~LSNPt 447 (603)
. +..+|+-+|+|.
T Consensus 283 k----~g~vIVdva~~~ 295 (401)
T 1x13_A 283 K----AGSVIVDLAAQN 295 (401)
T ss_dssp C----TTCEEEETTGGG
T ss_pred C----CCcEEEEEcCCC
Confidence 4 678999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.75 E-value=0.00011 Score=79.81 Aligned_cols=128 Identities=19% Similarity=0.206 Sum_probs=95.3
Q ss_pred CCcc----------ccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhc
Q 007456 289 FCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFAR 358 (603)
Q Consensus 289 ~~~F----------nDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~ 358 (603)
+|+| .|+..||+-.++.|+. |.++..+.. .+++|+|.|..|.++|+.+... |+
T Consensus 209 ~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~G---KTVgVIG~G~IGr~vA~~lraf-----Ga------ 271 (464)
T 3n58_A 209 FPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAG---KVAVVCGYGDVGKGSAQSLAGA-----GA------ 271 (464)
T ss_dssp SCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------
T ss_pred CCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccC---CEEEEECcCHHHHHHHHHHHHC-----CC------
Confidence 7998 6778999999988885 567888888 9999999999999999887654 43
Q ss_pred CeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCC
Q 007456 359 NKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKP 438 (603)
Q Consensus 359 ~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erP 438 (603)
+++.+|++. .....+.... ....+|.|+++. .|+++-+++..+.++++.++.|. +..
T Consensus 272 -~Viv~d~dp-----------~~a~~A~~~G-----~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK----~GA 328 (464)
T 3n58_A 272 -RVKVTEVDP-----------ICALQAAMDG-----FEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK----DMC 328 (464)
T ss_dssp -EEEEECSSH-----------HHHHHHHHTT-----CEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC----TTE
T ss_pred -EEEEEeCCc-----------chhhHHHhcC-----ceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC----CCe
Confidence 688777532 1111111100 012479999987 79999988878999999999993 688
Q ss_pred eEEecCCCCCccCCCHHHHh
Q 007456 439 AIFAMSNPTMNAECTAADAF 458 (603)
Q Consensus 439 IIF~LSNPt~~aE~tpeda~ 458 (603)
||.-.++... |+..+...
T Consensus 329 ILINvGRgdv--EID~~aL~ 346 (464)
T 3n58_A 329 IVGNIGHFDN--EIQVAALR 346 (464)
T ss_dssp EEEECSSSTT--TBTCGGGT
T ss_pred EEEEcCCCCc--ccCHHHHH
Confidence 9988888765 56654443
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.67 E-value=0.00011 Score=80.64 Aligned_cols=129 Identities=21% Similarity=0.282 Sum_probs=96.2
Q ss_pred CCcc----------ccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhc
Q 007456 289 FCMF----------NDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFAR 358 (603)
Q Consensus 289 ~~~F----------nDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~ 358 (603)
+|+| .|++.||+-.++.|+. |.++..|.. .+++|.|+|..|.++|+.+... |.
T Consensus 227 iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~G---KtVvVtGaGgIG~aiA~~Laa~-----GA------ 289 (488)
T 3ond_A 227 FPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAG---KVAVVAGYGDVGKGCAAALKQA-----GA------ 289 (488)
T ss_dssp SCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC------
T ss_pred CceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccC---CEEEEECCCHHHHHHHHHHHHC-----CC------
Confidence 7999 6889999999999886 788888888 9999999998888888776553 53
Q ss_pred CeEEEEecCCcccCCCCCCChhhhcccc-ccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCC
Q 007456 359 NKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVK 437 (603)
Q Consensus 359 ~~i~lvD~~GLv~~~r~~l~~~k~~fa~-~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~er 437 (603)
+++++|++.. +...+. ... ...++.++++. .|+++-.++..++++.+.++.|. +.
T Consensus 290 -~Viv~D~~~~-----------~a~~Aa~~g~------dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk----~g 345 (488)
T 3ond_A 290 -RVIVTEIDPI-----------CALQATMEGL------QVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK----NN 345 (488)
T ss_dssp -EEEEECSCHH-----------HHHHHHHTTC------EECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC----TT
T ss_pred -EEEEEcCCHH-----------HHHHHHHhCC------ccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC----CC
Confidence 6888887421 111111 100 12346666665 79999888888999999999993 68
Q ss_pred CeEEecCCCCCccCCCHHHHhcc
Q 007456 438 PAIFAMSNPTMNAECTAADAFKH 460 (603)
Q Consensus 438 PIIF~LSNPt~~aE~tpeda~~w 460 (603)
.||+-.+++.. |+..++.-.|
T Consensus 346 aiVvNaG~~~~--Ei~~~~l~~~ 366 (488)
T 3ond_A 346 AIVCNIGHFDN--EIDMLGLETH 366 (488)
T ss_dssp EEEEESSSTTT--TBTHHHHHTS
T ss_pred eEEEEcCCCCc--ccchHHHHHh
Confidence 89999999855 7887776555
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.10 E-value=0.0077 Score=63.26 Aligned_cols=238 Identities=15% Similarity=0.179 Sum_probs=121.7
Q ss_pred CChhhHHHHHhcCCCCCceEEEEecCccccccCCCCC--CcccccchhHHHHHHhcCCCCCceeeEEeeccCC-----ch
Q 007456 155 KDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGV--QGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTN-----NQ 227 (603)
Q Consensus 155 ~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~--~GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTn-----N~ 227 (603)
-.+..+.++... ..+|+|.++++...|+.|... .|..|+.++-.++ ++.| ++|.+.+- ++
T Consensus 18 l~P~~v~~L~~~----G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~ 84 (384)
T 1l7d_A 18 ISPEVVKKLVGL----GFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGT 84 (384)
T ss_dssp CCHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSC
T ss_pred CCHHHHHHHHhC----CCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCH
Confidence 356777777763 568999999999999999876 4888988877666 3433 56665321 11
Q ss_pred hc---c-cCcccccccccCCChhhhhHhHHHHHHHHHHhCCCeEEEeecCCCchHHHHHHHHhhcCCccccCCchhHHHH
Q 007456 228 KL---L-EDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRFCMFNDDIQGTAGVA 303 (603)
Q Consensus 228 ~L---l-~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~~Iq~EDf~~~naf~iL~ryr~~~~~FnDDiQGTaaV~ 303 (603)
+. + ..-.+++.-|.- ++ .+.+++++++--. ++.+|-+....+- ..+++|+ ....
T Consensus 85 ~~i~~l~~~~~~i~~~~~~-----~~---~~~~~~~~~~gi~-~~~~e~~~~~~~~-------~~l~~l~------~~a~ 142 (384)
T 1l7d_A 85 DEVALIKEGAVLMCHLGAL-----TN---RPVVEALTKRKIT-AYAMELMPRISRA-------QSMDILS------SQSN 142 (384)
T ss_dssp CGGGGSCTTCEEEEECCGG-----GC---HHHHHHHHHTTCE-EEEGGGCCCSGGG-------GGGCHHH------HHHH
T ss_pred HHHHhhccCCEEEEEeccc-----CC---HHHHHHHHHCCCE-EEEeccccccccc-------cccchhh------HHHH
Confidence 11 1 111122222210 00 1122233222211 2333222111000 0122222 1111
Q ss_pred HH---HHHHHHHHhCCCC-------CCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC
Q 007456 304 LA---GLLGTVRAQGLSL-------TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE 373 (603)
Q Consensus 304 lA---gll~A~r~tg~~l-------~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~ 373 (603)
+| +++.+.+..++.. .++...+|+|+|+|.+|.+++..+... |. +++.+|++.--.+.
T Consensus 143 ~ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~~~d~~~~~~~~ 210 (384)
T 1l7d_A 143 LAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRL-----GA-------VVMATDVRAATKEQ 210 (384)
T ss_dssp HHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCSTTHHH
T ss_pred HHHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHH
Confidence 22 4556666555411 134449999999999999998876543 42 48889976321000
Q ss_pred CCCCC-------h-------hhhccccccC-CcCCcccCCCHHHHhcccCCcEEEeecCC-----CCCCCHHHHHHhhhc
Q 007456 374 RKNLD-------P-------AAAPFAKDPG-DFMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRES 433 (603)
Q Consensus 374 r~~l~-------~-------~k~~fa~~~~-~~~~~~~~~~L~e~V~~vkptvLIG~S~~-----~g~Ft~evv~~M~~~ 433 (603)
...+. . .+-.|++... ++. ......+.+.++. .|++|.++.. +..++++.++.|.
T Consensus 211 ~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~-~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk-- 285 (384)
T 1l7d_A 211 VESLGGKFITVDDEAMKTAETAGGYAKEMGEEFR-KKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK-- 285 (384)
T ss_dssp HHHTTCEECCC------------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC--
T ss_pred HHHcCCeEEeecccccccccccccchhhcCHHHH-hhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC--
Confidence 00000 0 0001111100 000 0001127778875 7999998832 3568999999993
Q ss_pred CCCCCeEEecCCC
Q 007456 434 DSVKPAIFAMSNP 446 (603)
Q Consensus 434 ~~erPIIF~LSNP 446 (603)
+..+|+-+|-+
T Consensus 286 --~g~vivdva~~ 296 (384)
T 1l7d_A 286 --PGSVIIDLAVE 296 (384)
T ss_dssp --TTCEEEETTGG
T ss_pred --CCCEEEEEecC
Confidence 57789988854
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.76 E-value=0.00043 Score=74.28 Aligned_cols=112 Identities=21% Similarity=0.306 Sum_probs=69.3
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCC--------------hhhhcccccc
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLD--------------PAAAPFAKDP 388 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~--------------~~k~~fa~~~ 388 (603)
..||+|+|+|.+|.++|+++... |. +++++|++.-..+....+. +.+..|++..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~ 257 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEM 257 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHHTTCEECCCCC----------------
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhc
Confidence 39999999999999999988654 42 6889998753211000000 0011233211
Q ss_pred CC-cCCcccCCCHHHHhcccCCcEEEeecCC-----CCCCCHHHHHHhhhcCCCCCeEEecCC-CCCccCCC
Q 007456 389 GD-FMGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRESDSVKPAIFAMSN-PTMNAECT 453 (603)
Q Consensus 389 ~~-~~~~~~~~~L~e~V~~vkptvLIG~S~~-----~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt~~aE~t 453 (603)
.+ +. ..+..+|.|+++. .|++|++... |..||+++|+.|. +..||+-+|- |-..+|.|
T Consensus 258 s~~~~-~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk----~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 258 SGEYQ-VKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK----PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -CHHH-HHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC----TTCEEEETTGGGTCSBTTC
T ss_pred chhhh-hhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC----CCCEEEEEeCCCCCCcccc
Confidence 00 00 0012479999988 7999998533 4579999999994 7899999994 33344554
No 15
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.43 E-value=0.028 Score=56.64 Aligned_cols=141 Identities=14% Similarity=0.122 Sum_probs=90.6
Q ss_pred HHHHHHHhhc-CCccccC------CchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcC
Q 007456 279 FETLERYRKR-FCMFNDD------IQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAG 351 (603)
Q Consensus 279 f~iL~ryr~~-~~~FnDD------iQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~G 351 (603)
..+++..+++ +.++|-. .-.+-+|+=.++..++...+..+.. .+++|+|+|..|..+|+.+... |
T Consensus 107 id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g---~~v~IiG~G~iG~~~a~~l~~~-----G 178 (293)
T 3d4o_A 107 TYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHG---ANVAVLGLGRVGMSVARKFAAL-----G 178 (293)
T ss_dssp HHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTT---CEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred HHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCC---CEEEEEeeCHHHHHHHHHHHhC-----C
Confidence 4454555554 7777743 2345556655666666677777777 9999999999999999887543 4
Q ss_pred CChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhh
Q 007456 352 NNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMR 431 (603)
Q Consensus 352 ls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~ 431 (603)
. +++.+|+..- .+...+ .+ ...+ ....+|.|+++. .|++|-+. ..+.++++.++.|.
T Consensus 179 ~-------~V~~~dr~~~------~~~~~~-~~---g~~~---~~~~~l~~~l~~--aDvVi~~~-p~~~i~~~~l~~mk 235 (293)
T 3d4o_A 179 A-------KVKVGARESD------LLARIA-EM---GMEP---FHISKAAQELRD--VDVCINTI-PALVVTANVLAEMP 235 (293)
T ss_dssp C-------EEEEEESSHH------HHHHHH-HT---TSEE---EEGGGHHHHTTT--CSEEEECC-SSCCBCHHHHHHSC
T ss_pred C-------EEEEEECCHH------HHHHHH-HC---CCee---cChhhHHHHhcC--CCEEEECC-ChHHhCHHHHHhcC
Confidence 3 6888887520 011000 01 0000 012368888876 79999665 46899999999983
Q ss_pred hcCCCCCeEEecC-CCCCccCCCHHHH
Q 007456 432 ESDSVKPAIFAMS-NPTMNAECTAADA 457 (603)
Q Consensus 432 ~~~~erPIIF~LS-NPt~~aE~tpeda 457 (603)
+..+|+=+| +|. ++..+.+
T Consensus 236 ----~~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 236 ----SHTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp ----TTCEEEECSSTTC---SBCHHHH
T ss_pred ----CCCEEEEecCCCC---CCCHHHH
Confidence 567888888 454 3445444
No 16
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.17 E-value=0.003 Score=67.23 Aligned_cols=105 Identities=15% Similarity=0.239 Sum_probs=64.8
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCC-------C---hhhhccccccCC-c
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-------D---PAAAPFAKDPGD-F 391 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l-------~---~~k~~fa~~~~~-~ 391 (603)
..|++|+|+|.+|..+|+.+... |. +++.+|++.-..+.-..+ . .....|++...+ +
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~ 251 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAE 251 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHH
Confidence 38999999999999999988764 32 688999874211000000 0 000111111000 0
Q ss_pred CCcccCCCHHHHhcccCCcEEEeecCC-----CCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007456 392 MGLREGASLLEVVRKVKPHVLLGLSGV-----GGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (603)
Q Consensus 392 ~~~~~~~~L~e~V~~vkptvLIG~S~~-----~g~Ft~evv~~M~~~~~erPIIF~LSNP 446 (603)
......+|.|+++. .|++|++-.. |..||+++++.|. +..+|+-+|=+
T Consensus 252 -~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk----pGsVIVDvA~d 304 (381)
T 3p2y_A 252 -RAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ----PGSVVVDLAGE 304 (381)
T ss_dssp -HHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC----TTCEEEETTGG
T ss_pred -HhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC----CCcEEEEEeCC
Confidence 00012468899987 7999997433 3579999999994 68899999854
No 17
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=95.60 E-value=0.15 Score=55.05 Aligned_cols=185 Identities=16% Similarity=0.168 Sum_probs=124.4
Q ss_pred CCChhhhhHhHHHHHHHHHHhC-CCeEEEeecCCCchH-H-HHHHHHhhcC-----Ccc----------ccCCchhHHHH
Q 007456 242 RLEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA-F-ETLERYRKRF-----CMF----------NDDIQGTAGVA 303 (603)
Q Consensus 242 R~~g~~Y~~~vdefv~av~~~~-P~~~Iq~EDf~~~na-f-~iL~ryr~~~-----~~F----------nDDiQGTaaV~ 303 (603)
..+..|-..|...|+.++.+.- |+.-|-=+|++..-. . -+.+.|+... .++ .+--.-||-=+
T Consensus 125 ~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv 204 (424)
T 3k92_A 125 TMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGV 204 (424)
T ss_dssp GSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHH
Confidence 3455677788999999998876 777788899987422 2 2557775421 122 23334578778
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhh-h
Q 007456 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA-A 382 (603)
Q Consensus 304 lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k-~ 382 (603)
..++-.+++..|.+|+. .||+|-|.|..|...|++|.+. |. +-+.+.|++|-|++.. .|+... +
T Consensus 205 ~~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~-GlD~~~l~ 269 (424)
T 3k92_A 205 TICIEEAVKKKGIKLQN---ARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD-GLDIPYLL 269 (424)
T ss_dssp HHHHHHHHHHTTCCGGG---CEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHHcCCCccc---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC-CCCHHHHH
Confidence 88888999999998888 9999999999999999998764 42 3467999999999754 343322 1
Q ss_pred ccccccCCcCCc-ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007456 383 PFAKDPGDFMGL-REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (603)
Q Consensus 383 ~fa~~~~~~~~~-~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt~ 448 (603)
.+......+.+. ....+-.++ -.++.||||=+.. .+..|++-++.+ .-.+|.--+| |+.
T Consensus 270 ~~~~~~g~i~~~~a~~~~~~~i-~~~~~DIliPcA~-~n~I~~~~a~~l-----~ak~V~EgAN~p~t 330 (424)
T 3k92_A 270 DKRDSFGMVTNLFTDVITNEEL-LEKDCDILVPAAI-SNQITAKNAHNI-----QASIVVERANGPTT 330 (424)
T ss_dssp HHCCSSSCCGGGCSCCBCHHHH-HHSCCSEEEECSC-SSCBCTTTGGGC-----CCSEEECCSSSCBC
T ss_pred HHHHHhCCCCCCCcEEecCccc-eeccccEEeecCc-ccccChhhHhhc-----CceEEEcCCCCCCC
Confidence 121111101000 011233343 3568999998776 599999988887 3578888888 653
No 18
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.55 E-value=0.02 Score=59.29 Aligned_cols=141 Identities=17% Similarity=0.143 Sum_probs=97.7
Q ss_pred HHHHHHHHHhC--CCe---EEEeecCCC--chHHHHHHHHh--hcCCccc---------cC-CchhHHHHHHHHHHHHHH
Q 007456 253 DEFMEAVHARW--PKA---IVQFEDFQM--KWAFETLERYR--KRFCMFN---------DD-IQGTAGVALAGLLGTVRA 313 (603)
Q Consensus 253 defv~av~~~~--P~~---~Iq~EDf~~--~naf~iL~ryr--~~~~~Fn---------DD-iQGTaaV~lAgll~A~r~ 313 (603)
+|+.+.+.++- |++ ++|+==.+. -+..++++.-. +.+=.|| .+ ..+-.-+|-.|++-.++-
T Consensus 79 ~ell~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p~KDVDG~hp~N~G~l~~g~~~~~~~PcTp~gi~~ll~~ 158 (301)
T 1a4i_A 79 SEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKE 158 (301)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhccCCCCCccCCChhhHHHHhcCCCCCCccCchHHHHHHHHHH
Confidence 45666666554 644 777644444 45666665442 2222222 11 234456788889999999
Q ss_pred hCCCCCCCCCceEEEeCcc-hhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcC
Q 007456 314 QGLSLTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFM 392 (603)
Q Consensus 314 tg~~l~dl~~~riv~~GAG-sAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~ 392 (603)
.+.+++. .++||+|+| ..|.-+|.++... | .++++++++
T Consensus 159 ~~i~l~g---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------------------- 198 (301)
T 1a4i_A 159 TGVPIAG---RHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------------------- 198 (301)
T ss_dssp TTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT-------------------------
T ss_pred cCCCCCC---CEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC-------------------------
Confidence 9998888 999999999 5799998888663 3 258888743
Q ss_pred CcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007456 393 GLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (603)
Q Consensus 393 ~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNP 446 (603)
..+|.+.++. .|++|++.+.++.+|+++|| +.-+|+=++-|
T Consensus 199 ----t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ----TAHLDEEVNK--GDILVVATGQPEMVKGEWIK-------PGAIVIDCGIN 239 (301)
T ss_dssp ----CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECCCB
T ss_pred ----cccHHHHhcc--CCEEEECCCCcccCCHHHcC-------CCcEEEEccCC
Confidence 1358889988 79999999999999998875 34577766654
No 19
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.23 E-value=0.23 Score=49.71 Aligned_cols=122 Identities=14% Similarity=0.137 Sum_probs=74.3
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
..||.|+|+|..|.++|..+... |.+. .+|+++|++- +.+...++.| .- ....++.|
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~~----~~V~v~dr~~------~~~~~l~~~~---gi-----~~~~~~~~ 59 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYDP----NRICVTNRSL------DKLDFFKEKC---GV-----HTTQDNRQ 59 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCCG----GGEEEECSSS------HHHHHHHHTT---CC-----EEESCHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCCC----CeEEEEeCCH------HHHHHHHHHc---CC-----EEeCChHH
Confidence 37899999999999999887653 5432 4688888741 1122222111 10 11357889
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhc-CCCCCeEEecCCCCCccCCCHHHHhcccCC--cEEEEcCCCCCceec
Q 007456 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRES-DSVKPAIFAMSNPTMNAECTAADAFKHAGE--NIVFASGSPFENVDL 478 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~-~~erPIIF~LSNPt~~aE~tpeda~~wt~G--rai~AtGSPf~pv~~ 478 (603)
+++. +|++| ++..+ ...+++++.+... ..++.+|...++..+. +..-+|... +++-+ -|+.|...
T Consensus 60 ~~~~--aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~~-----~~l~~~l~~~~~vvr~--mPn~p~~v 127 (280)
T 3tri_A 60 GALN--ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVTT-----PLIEKWLGKASRIVRA--MPNTPSSV 127 (280)
T ss_dssp HHSS--CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCCH-----HHHHHHHTCCSSEEEE--ECCGGGGG
T ss_pred HHhc--CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCCH-----HHHHHHcCCCCeEEEE--ecCChHHh
Confidence 9986 78877 44333 4567888888542 3566688888887763 333444432 33322 47777665
No 20
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.19 E-value=0.034 Score=57.12 Aligned_cols=158 Identities=17% Similarity=0.202 Sum_probs=106.9
Q ss_pred cCCCCCceeeEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhC--CCe---EEEeecCCCchHHHHH
Q 007456 208 AGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW--PKA---IVQFEDFQMKWAFETL 282 (603)
Q Consensus 208 gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~--P~~---~Iq~EDf~~~naf~iL 282 (603)
-||+ +.-+.|+-.+. -+|+.+.+++.. |++ ++|+==.+.-+..+++
T Consensus 61 ~Gi~---~~~~~lp~~~s--------------------------~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~ 111 (285)
T 3p2o_A 61 CGIK---SLVYHLNENIT--------------------------QNELLALINTLNHDDSVHGILVQLPLPDHICKDLIL 111 (285)
T ss_dssp HTCE---EEEEEECTTCC--------------------------HHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHH
T ss_pred cCCe---EEEEECCCCCC--------------------------HHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHH
Confidence 6788 77777776543 256666676664 554 6666433444455555
Q ss_pred HHHh--hcCCccc---------cCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcch-hHHHHHHHHHHHHHHhc
Q 007456 283 ERYR--KRFCMFN---------DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMA 350 (603)
Q Consensus 283 ~ryr--~~~~~Fn---------DDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~ 350 (603)
+.-. +.+=.|| .+-.|-.-+|-.|++..++-.+.+++. .++|++|+|. .|..+|.+|...
T Consensus 112 ~~I~p~KDVDg~~~~N~g~l~~g~~~g~~PcTp~gv~~lL~~~~i~l~G---k~vvVvGrs~iVG~p~A~lL~~~----- 183 (285)
T 3p2o_A 112 ESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEG---KDAVIIGASNIVGRPMATMLLNA----- 183 (285)
T ss_dssp HHSCGGGCTTCCSHHHHHHHHTTCCSSCCCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHHHT-----
T ss_pred hhCCcccccccCCHhhhhhhhcCCCCCCCCCCHHHHHHHHHHhCCCCCC---CEEEEECCCchHHHHHHHHHHHC-----
Confidence 5432 2222222 222234567888899999999999888 9999999876 899999988763
Q ss_pred CCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHh
Q 007456 351 GNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAM 430 (603)
Q Consensus 351 Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M 430 (603)
|. .+.+++++ ..+|.+.++. +|++|...+.++.++.++||
T Consensus 184 gA-------tVtv~h~~-----------------------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-- 223 (285)
T 3p2o_A 184 GA-------TVSVCHIK-----------------------------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK-- 223 (285)
T ss_dssp TC-------EEEEECTT-----------------------------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC--
T ss_pred CC-------eEEEEeCC-----------------------------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC--
Confidence 32 57877752 0248888988 79999999999999998774
Q ss_pred hhcCCCCCeEEecC-CCC
Q 007456 431 RESDSVKPAIFAMS-NPT 447 (603)
Q Consensus 431 ~~~~~erPIIF~LS-NPt 447 (603)
+.-+|+=++ ||.
T Consensus 224 -----~GavVIDVgi~~~ 236 (285)
T 3p2o_A 224 -----EGVIVVDVGINRL 236 (285)
T ss_dssp -----TTEEEEECCCEEC
T ss_pred -----CCeEEEEeccCcc
Confidence 344666553 443
No 21
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.14 E-value=0.034 Score=57.11 Aligned_cols=139 Identities=17% Similarity=0.185 Sum_probs=91.5
Q ss_pred HHHHHHHHHhC--CCe---EEEeecCCCchHHHHHHHH--hhcCCcccc---------CCchhHHHHHHHHHHHHHHhCC
Q 007456 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERY--RKRFCMFND---------DIQGTAGVALAGLLGTVRAQGL 316 (603)
Q Consensus 253 defv~av~~~~--P~~---~Iq~EDf~~~naf~iL~ry--r~~~~~FnD---------DiQGTaaV~lAgll~A~r~tg~ 316 (603)
+|+.+.+++.. |++ ++|+==.+.-+..++++.- .+.+=.||. +..+-.-+|-.|++-.++-.+.
T Consensus 78 ~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~PcTp~gv~~lL~~~~i 157 (285)
T 3l07_A 78 SELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKKCLESCTPKGIMTMLREYGI 157 (285)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGBTTCCSHHHHHHHHHTCTTCCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCcccccccCChhheeehhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 56666666664 544 5665333333444444432 122222221 1023345677889999999999
Q ss_pred CCCCCCCceEEEeCcch-hHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcc
Q 007456 317 SLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLR 395 (603)
Q Consensus 317 ~l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~ 395 (603)
+++. .++|++|+|. .|..+|.+|... |. .+.+++|+
T Consensus 158 ~l~G---k~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~---------------------------- 194 (285)
T 3l07_A 158 KTEG---AYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF---------------------------- 194 (285)
T ss_dssp CCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT----------------------------
T ss_pred CCCC---CEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC----------------------------
Confidence 8888 9999999876 899999988763 32 47777642
Q ss_pred cCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 007456 396 EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 396 ~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LS 444 (603)
..+|.+.++. +|++|.+.+.++.++.|+|| +.-+|+=++
T Consensus 195 -t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvg 233 (285)
T 3l07_A 195 -TTDLKSHTTK--ADILIVAVGKPNFITADMVK-------EGAVVIDVG 233 (285)
T ss_dssp -CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECC
T ss_pred -chhHHHhccc--CCEEEECCCCCCCCCHHHcC-------CCcEEEEec
Confidence 0248889988 79999999999999998774 344666554
No 22
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=95.13 E-value=0.87 Score=49.53 Aligned_cols=186 Identities=12% Similarity=0.106 Sum_probs=123.2
Q ss_pred cCCChhhhhHhHHHHHHHHHHhC-CCeEEEeecCCCchHH--HHHHHHh---hcC-Ccc----------ccCCchhHHHH
Q 007456 241 PRLEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAF--ETLERYR---KRF-CMF----------NDDIQGTAGVA 303 (603)
Q Consensus 241 ~R~~g~~Y~~~vdefv~av~~~~-P~~~Iq~EDf~~~naf--~iL~ryr---~~~-~~F----------nDDiQGTaaV~ 303 (603)
+..+..|-..|...|+..+.+.. |+.-|--.|++..-.- -+.+.|+ ... +|| .+.-.-||-=+
T Consensus 139 k~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv 218 (450)
T 4fcc_A 139 KGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGL 218 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeH
Confidence 34567788889999999987766 8889999999764321 2444454 332 232 12233477767
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhc
Q 007456 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP 383 (603)
Q Consensus 304 lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~ 383 (603)
.-++-.+++..|.+|+. .||+|-|.|..|...|+.|.+. |. +=|.+-|++|-|++.. .++..+..
T Consensus 219 ~~~~~~~~~~~~~~l~G---k~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~-Gid~e~l~ 283 (450)
T 4fcc_A 219 VYFTEAMLKRHGMGFEG---MRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES-GFTKEKLA 283 (450)
T ss_dssp HHHHHHHHHHTTCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT-CCCHHHHH
T ss_pred HHHHHHHHHHcCCCcCC---CEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC-CCCHHHHH
Confidence 77888889999998888 9999999999999999988764 43 3466789999988653 34433221
Q ss_pred cccccCCcCCcccCCCHHH-------------HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007456 384 FAKDPGDFMGLREGASLLE-------------VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (603)
Q Consensus 384 fa~~~~~~~~~~~~~~L~e-------------~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt~ 448 (603)
...+... .....+.+ -+-.++.|||+=+.. .+.+|++-++.+.+ +.-.+|.-=+| |+.
T Consensus 284 ~l~e~k~----~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl-~~~I~~~~a~~L~a--~g~k~IaEgAN~p~t 355 (450)
T 4fcc_A 284 RLIEIKS----SRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCAT-QNELDVDAAHQLIA--NGVKAVAEGANMPTT 355 (450)
T ss_dssp HHHHHHT----STTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSC-TTCBCHHHHHHHHH--TTCCEEECCSSSCBC
T ss_pred HHHHHhc----ccCCccccccccCCcEEecCcccccCCccEEeeccc-cccccHHHHHHHHh--cCceEEecCCCCCCC
Confidence 1100000 00001111 123467999998876 68999999999954 22357777777 653
No 23
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.96 E-value=0.04 Score=56.65 Aligned_cols=142 Identities=19% Similarity=0.198 Sum_probs=92.6
Q ss_pred HHHHHHHHHhC--CCe---EEEeecCCCchHHHHHHHH--hhcCCcccc--------CCchhHHHHHHHHHHHHHHhCCC
Q 007456 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERY--RKRFCMFND--------DIQGTAGVALAGLLGTVRAQGLS 317 (603)
Q Consensus 253 defv~av~~~~--P~~---~Iq~EDf~~~naf~iL~ry--r~~~~~FnD--------DiQGTaaV~lAgll~A~r~tg~~ 317 (603)
+|+.+.++++. |++ ++|+==...-+..++++.- .+.+=.||. ...+-.-+|-.|++..++-.+.+
T Consensus 79 ~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~g~l~~g~~~~~PcTp~gv~~lL~~~~i~ 158 (286)
T 4a5o_A 79 DDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDGFHPYNIGRLAQRMPLLRPCTPKGIMTLLASTGAD 158 (286)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCcccccccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCC
Confidence 56666776665 544 6665323333344444432 111211211 11223456778899999999998
Q ss_pred CCCCCCceEEEeCcch-hHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCccc
Q 007456 318 LTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (603)
Q Consensus 318 l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~ 396 (603)
++. .++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 159 l~G---k~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~----------------------------- 194 (286)
T 4a5o_A 159 LYG---MDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF----------------------------- 194 (286)
T ss_dssp CTT---CEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT-----------------------------
T ss_pred CCC---CEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-----------------------------
Confidence 888 9999999875 899999988763 32 57777542
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEec-CCCC
Q 007456 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAM-SNPT 447 (603)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~L-SNPt 447 (603)
..+|.+.++. +|++|+..+.++.++.|+|| +.-+|+=+ +||.
T Consensus 195 T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK-------EGAIVIDVGINRQ 237 (286)
T ss_dssp CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC-------TTCEEEECCSCSS
T ss_pred CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC-------CCeEEEEeccccc
Confidence 1248888988 79999999999999998874 33466655 3554
No 24
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=94.95 E-value=0.89 Score=49.55 Aligned_cols=191 Identities=16% Similarity=0.160 Sum_probs=124.6
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCeEEEeecCCCchH--HHHHHHHhhc---CC-cc----------ccCCchhHHHHHH
Q 007456 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRKR---FC-MF----------NDDIQGTAGVALA 305 (603)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~~Iq~EDf~~~na--f~iL~ryr~~---~~-~F----------nDDiQGTaaV~lA 305 (603)
.+..|...|-..||..+.+.. |..-|-=+|++..-. --+.+.|+.. .+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 456677888888999986554 888888999987432 2255676643 21 11 1112246666666
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhc--
Q 007456 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAP-- 383 (603)
Q Consensus 306 gll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~-- 383 (603)
++-.+++..|.+|+. .||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .|+..+..
T Consensus 225 ~~~~~~~~~g~~l~g---~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~-Gld~~~l~~~ 289 (456)
T 3r3j_A 225 FAENVLKDLNDNLEN---KKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN-GFTKEQLNYI 289 (456)
T ss_dssp HHHHHHHTTTCCSTT---CCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT-CCCHHHHHHH
T ss_pred HHHHHHHHcCCCccC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC-CCCHHHHHHH
Confidence 777888888888888 9999999999999999988765 32 2345899999988753 34432211
Q ss_pred -------------cccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCCc
Q 007456 384 -------------FAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTMN 449 (603)
Q Consensus 384 -------------fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt~~ 449 (603)
|+...+..... .... +-.++.||||=+.. ++..|++-++.+.+ +.-+||.--+| |+.
T Consensus 290 ~~~k~~~~~~v~~~~~~~~~a~~v-~~~~----i~~~~~DI~iPcA~-~~~I~~~na~~l~~--~~ak~V~EgAN~p~T- 360 (456)
T 3r3j_A 290 MDIKNNQRLRLKEYLKYSKTAKYF-ENQK----PWNIPCDIAFPCAT-QNEINENDADLFIQ--NKCKMIVEGANMPTH- 360 (456)
T ss_dssp HHHHHTSCCCGGGGGGTCSSCEEE-CSCC----GGGSCCSEEEECSC-TTCBCHHHHHHHHH--HTCCEEECCSSSCBC-
T ss_pred HHHHHhcCcchhhhhhcCCCceEe-CCcc----ccccCccEEEeCCC-ccchhhHHHHHHHh--cCCeEEEecCCCCCC-
Confidence 11100000000 0112 23567899998776 79999999999842 35679999998 754
Q ss_pred cCCCHHHHhc
Q 007456 450 AECTAADAFK 459 (603)
Q Consensus 450 aE~tpeda~~ 459 (603)
.| +.+.+.
T Consensus 361 ~e--A~~iL~ 368 (456)
T 3r3j_A 361 IK--ALHKLK 368 (456)
T ss_dssp TT--HHHHHH
T ss_pred HH--HHHHHH
Confidence 23 556554
No 25
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=94.92 E-value=0.032 Score=57.44 Aligned_cols=141 Identities=16% Similarity=0.138 Sum_probs=94.8
Q ss_pred HHHHHHHHHhC--CCe---EEEeecCCCchHHHHHHHHh--hcCCcccc--------CCchhHHHHHHHHHHHHHHhCCC
Q 007456 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYR--KRFCMFND--------DIQGTAGVALAGLLGTVRAQGLS 317 (603)
Q Consensus 253 defv~av~~~~--P~~---~Iq~EDf~~~naf~iL~ryr--~~~~~FnD--------DiQGTaaV~lAgll~A~r~tg~~ 317 (603)
+|+.+.+.++- |++ ++|+==.+.-+..++++.-. +.+=.||. ...+-.-+|-.|++-.++..+.+
T Consensus 77 ~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~~i~ 156 (288)
T 1b0a_A 77 AELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNID 156 (288)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCccCcccCCccchhHHhCCCCCCCCCcHHHHHHHHHHcCCC
Confidence 46666666654 543 77764444444444544331 11111111 11244567888899999999998
Q ss_pred CCCCCCceEEEeCcch-hHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCccc
Q 007456 318 LTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (603)
Q Consensus 318 l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~ 396 (603)
++. .++||+|+|. .|.-+|.++... | ..+++++++
T Consensus 157 l~g---k~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~----------------------------- 192 (288)
T 1b0a_A 157 TFG---LNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF----------------------------- 192 (288)
T ss_dssp CTT---CEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS-----------------------------
T ss_pred CCC---CEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC-----------------------------
Confidence 888 9999999995 699988887653 3 258887632
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007456 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (603)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNP 446 (603)
..+|.+.++. .|++|+..+.++.+++++|| +.-+|+=++-|
T Consensus 193 t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk-------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK-------EGAIVIDVGIN 233 (288)
T ss_dssp CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC-------TTCEEEECCCE
T ss_pred chhHHHHhcc--CCEEEECCCCcCcCCHHHcC-------CCcEEEEccCC
Confidence 1358889988 79999999999999998874 34466666644
No 26
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=94.80 E-value=0.31 Score=52.47 Aligned_cols=181 Identities=18% Similarity=0.205 Sum_probs=120.2
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCeEEEeecCCCchH--HHHHHHHhhcC-----Ccc----------ccCCchhHHHHH
Q 007456 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRKRF-----CMF----------NDDIQGTAGVAL 304 (603)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~~Iq~EDf~~~na--f~iL~ryr~~~-----~~F----------nDDiQGTaaV~l 304 (603)
.+..|-..|...|+.++...- |+.-|-=+|++..-. --+.+.|+... .++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 345677788999999998876 888888899987532 23566774321 112 222334666666
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEecCCcccCCCCCCChhhh-
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAAA- 382 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~-lvD~~GLv~~~r~~l~~~k~- 382 (603)
-++-.+++..|.+|+. .||+|-|.|..|...|++|.+. |. +++ +.|++|-|++.. .|+..+.
T Consensus 203 ~~~~~~~~~~g~~l~g---k~vaVqG~GnVG~~~a~~L~~~-----Ga-------kVVavsD~~G~i~dp~-Gld~~~l~ 266 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRG---ARVVVQGLGQVGAAVALHAERL-----GM-------RVVAVATSMGGMYAPE-GLDVAEVL 266 (419)
T ss_dssp HHHHHHHHHHTCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEEETTEEEECTT-CCCHHHHH
T ss_pred HHHHHHHHhcCCCccC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEcCCCeEECCC-CCCHHHHH
Confidence 6778888889998888 9999999999999999888653 43 566 999999998754 3332221
Q ss_pred ccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007456 383 PFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (603)
Q Consensus 383 ~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt~ 448 (603)
.+......+.+- . .+-.| +-.++.|||+=++. ++.+|++-.+.+ .-.||.--+| |+.
T Consensus 267 ~~~~~~g~v~~~-~-~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l-----~ak~V~EgAN~p~t 324 (419)
T 3aoe_E 267 SAYEATGSLPRL-D-LAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV-----QAQAVVEVANFGLN 324 (419)
T ss_dssp HHHHHHSSCSCC-C-BCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC-----CCSEEEECSTTCBC
T ss_pred HHHHhhCCccee-e-ccchh-hhccCceEEEeccc-ccccccchHhhC-----CceEEEECCCCcCC
Confidence 111111111000 0 00112 34578999998775 799999999887 3469998888 654
No 27
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=94.56 E-value=0.38 Score=52.12 Aligned_cols=182 Identities=13% Similarity=0.130 Sum_probs=118.9
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCeEEEeecCCCch--HHHHHHHHhhc---C--Ccc----------ccCCchhHHHHH
Q 007456 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR---F--CMF----------NDDIQGTAGVAL 304 (603)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~~Iq~EDf~~~n--af~iL~ryr~~---~--~~F----------nDDiQGTaaV~l 304 (603)
.+..|-..|...|+.++...- |+.-|-=+|++..- ---+.+.|+.. . .++ .+.-.-||-=+.
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 345677788999999999877 88888889998741 22356677431 1 222 222334666666
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEecCCcccCCCC-C---CCh
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERK-N---LDP 379 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~-lvD~~GLv~~~r~-~---l~~ 379 (603)
-++-.+++..|.+|+. .||+|.|.|..|...|++|.+. |. +++ +.|++|-|++... + |..
T Consensus 220 ~~~~~~~~~~g~~l~g---~~vaVqGfGnVG~~~a~~L~e~-----Ga-------kvVavsD~~G~i~dp~Gld~~~l~~ 284 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEG---ARVAIQGFGNVGNAAARAFHDH-----GA-------RVVAVQDHTGTVYNEAGIDPYDLLR 284 (440)
T ss_dssp HHHHHHHHHHTCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEECSSCEEECTTCCCHHHHHH
T ss_pred HHHHHHHHhcCCCccC---CEEEEeccCHHHHHHHHHHHHC-----CC-------EEEEEEcCCcEEECCCCCCHHHHHH
Confidence 6777888889998888 9999999999999999888663 42 455 9999999887642 1 222
Q ss_pred hhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007456 380 AAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (603)
Q Consensus 380 ~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt~ 448 (603)
++..+-+ -.++.+ ....+-.|. -.++.||||=+.. ++..|++-++.+ .-.+|.--+| |+.
T Consensus 285 ~~~~~g~-i~~y~~-a~~i~~~ei-~~~~~DIlvPcA~-~n~i~~~na~~l-----~ak~VvEgAN~p~t 345 (440)
T 3aog_A 285 HVQEFGG-VRGYPK-AEPLPAADF-WGLPVEFLVPAAL-EKQITEQNAWRI-----RARIVAEGANGPTT 345 (440)
T ss_dssp HHHHTSS-STTCTT-SEECCHHHH-TTCCCSEEEECSS-SSCBCTTTGGGC-----CCSEEECCSSSCBC
T ss_pred HHHhcCC-cccCCC-ceEcCchhh-hcCCCcEEEecCC-cCccchhhHHHc-----CCcEEEecCccccC
Confidence 2222110 001110 011233443 4578899997765 688888888877 3467777777 653
No 28
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=94.53 E-value=0.052 Score=55.53 Aligned_cols=137 Identities=9% Similarity=0.124 Sum_probs=93.3
Q ss_pred HHHHHHHHHhC--CCe---EEEeecCCCchHHHHHHHH--hhcCCccccC--------CchhHHHHHHHHHHHHHHhCCC
Q 007456 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERY--RKRFCMFNDD--------IQGTAGVALAGLLGTVRAQGLS 317 (603)
Q Consensus 253 defv~av~~~~--P~~---~Iq~EDf~~~naf~iL~ry--r~~~~~FnDD--------iQGTaaV~lAgll~A~r~tg~~ 317 (603)
+|+++.++++. |++ ++|+==.+.-+..++++.- .+.+=.||.- ..+-.-+|-.|++..++..+
T Consensus 70 ~ell~~I~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~p~KDVDG~~p~n~G~l~~g~~~~~PcTp~gv~~lL~~~~-- 147 (276)
T 3ngx_A 70 KDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALNREFLVPATPRAVIDIMDYYG-- 147 (276)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECSCCCTTCCHHHHHTTSCGGGBTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCCCCCcccCCCccchhhhhcCCCCCCCCcHHHHHHHHHHhC--
Confidence 56777777665 654 6676434444555555543 2223333322 22344578889999999998
Q ss_pred CCCCCCceEEEeCcc-hhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCccc
Q 007456 318 LTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (603)
Q Consensus 318 l~dl~~~riv~~GAG-sAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~ 396 (603)
++. .++|++|+| ..|..+|.++... |. .+++++++
T Consensus 148 l~G---k~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~----------------------------- 183 (276)
T 3ngx_A 148 YHE---NTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK----------------------------- 183 (276)
T ss_dssp CCS---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-----------------------------
T ss_pred cCC---CEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC-----------------------------
Confidence 777 999999998 5899999988763 32 57887652
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 007456 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LS 444 (603)
..+|.+.++. .|++|++.+.++.+++++|| +.-+|+=++
T Consensus 184 t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvg 222 (276)
T 3ngx_A 184 TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT-------PGSVVIDVG 222 (276)
T ss_dssp CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC-------TTCEEEECC
T ss_pred cccHHHhhcc--CCEEEECCCCCccccHhhcc-------CCcEEEEec
Confidence 0258899988 79999999999999987763 334666554
No 29
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=94.51 E-value=0.4 Score=51.65 Aligned_cols=183 Identities=16% Similarity=0.162 Sum_probs=105.7
Q ss_pred CChhhhhHhHHHHHHHHHHhC-CCeEEEeecCCCchH--HHHHHHHhhcC------Ccc----------ccCCchhHHHH
Q 007456 243 LEGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRKRF------CMF----------NDDIQGTAGVA 303 (603)
Q Consensus 243 ~~g~~Y~~~vdefv~av~~~~-P~~~Iq~EDf~~~na--f~iL~ryr~~~------~~F----------nDDiQGTaaV~ 303 (603)
.+..|-..|...|+.++...- |+.-|-=+|++..-. --+.+.|+... .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 345667788999999998877 888888899997522 24667775321 122 12223465555
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC-----CcccCCCCCCC
Q 007456 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD-----GLITKERKNLD 378 (603)
Q Consensus 304 lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~-----GLv~~~r~~l~ 378 (603)
.-++-.+++..|.+|+. .||+|.|.|..|...|++|.+. |. +=+-+.|++ |-|++.. .|+
T Consensus 196 ~~~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~~~~~~G~i~d~~-Gld 260 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMED---AKIAVQGFGNVGTFTVKNIERQ-----GG------KVCAIAEWDRNEGNYALYNEN-GID 260 (421)
T ss_dssp HHHHHHHHHHTTCCGGG---SCEEEECCSHHHHHHHHHHHHT-----TC------CEEECCBCCSSSCSBCCBCSS-CCC
T ss_pred HHHHHHHHHhcCCCccC---CEEEEECcCHHHHHHHHHHHHC-----CC------EEEEEEecCCCccceEEECCC-CCC
Confidence 66777888888988877 9999999999999999888663 43 234499999 9998754 333
Q ss_pred hhhh-ccccccCCcCCcc--cCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CC
Q 007456 379 PAAA-PFAKDPGDFMGLR--EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PT 447 (603)
Q Consensus 379 ~~k~-~fa~~~~~~~~~~--~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt 447 (603)
.... .+......+.+-+ ...+-.| +-.++.||||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 261 ~~~l~~~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l-----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 261 FKELLAYKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI-----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHHHCC----------------------CEEECSC-SSCSCHHHHTTC-----CCSEEECCSSSCS
T ss_pred HHHHHHHHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc-----CCeEEEeCCcccc
Confidence 2211 1111100000000 0001112 23356677775553 566776666655 2345555555 44
No 30
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.32 E-value=0.059 Score=55.74 Aligned_cols=139 Identities=15% Similarity=0.205 Sum_probs=94.8
Q ss_pred HHHHHHHHHhC--CCe---EEEeecCCCchHHHHHHHHh--hcCCccc----------cCCchhHHHHHHHHHHHHHHhC
Q 007456 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYR--KRFCMFN----------DDIQGTAGVALAGLLGTVRAQG 315 (603)
Q Consensus 253 defv~av~~~~--P~~---~Iq~EDf~~~naf~iL~ryr--~~~~~Fn----------DDiQGTaaV~lAgll~A~r~tg 315 (603)
+|+.+.++++. |++ ++|+==.+.-+..++++.-. +.+=.|| +...|-.-+|-.|++..++-.+
T Consensus 81 ~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~~PcTp~gv~~lL~~~~ 160 (300)
T 4a26_A 81 EVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCG 160 (300)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHCTTCCCSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcccccccCCcceEEEeecCCCcCCCCCCCHHHHHHHHHHcC
Confidence 56777777765 554 66664333444445554432 2222222 2234545678888999999999
Q ss_pred CCCCCCCCceEEEeCcch-hHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCc
Q 007456 316 LSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL 394 (603)
Q Consensus 316 ~~l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~ 394 (603)
.+++. .++|++|+|. .|..+|.+|... |. .+++++++ +
T Consensus 161 i~l~G---k~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~---T----------------------- 199 (300)
T 4a26_A 161 IEMAG---KRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG---T----------------------- 199 (300)
T ss_dssp CCCTT---CEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT---S-----------------------
T ss_pred CCCCC---CEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC---C-----------------------
Confidence 99888 9999999876 899999988763 32 58888762 0
Q ss_pred ccCCCHH--HHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecC
Q 007456 395 REGASLL--EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 395 ~~~~~L~--e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LS 444 (603)
.+|. +.++. .|++|.+.+.++.++.++|| +.-+|+=++
T Consensus 200 ---~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk-------~GavVIDvg 239 (300)
T 4a26_A 200 ---STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK-------EGAAVVDVG 239 (300)
T ss_dssp ---CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC-------TTCEEEECC
T ss_pred ---CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC-------CCcEEEEEe
Confidence 1355 88888 79999999999999998764 344666554
No 31
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=93.76 E-value=0.045 Score=57.02 Aligned_cols=115 Identities=14% Similarity=0.181 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHH---------hCCCCCCCCCceEEEeCcch-hHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCccc
Q 007456 302 VALAGLLGTVRA---------QGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLIT 371 (603)
Q Consensus 302 V~lAgll~A~r~---------tg~~l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~ 371 (603)
+|-.|.+-.++- .|.++.. .++||+|+|. .|.-+|.++... | .+++++|++..-.
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~g---k~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l 214 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYG---KKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQK 214 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTT---CEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEE
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCC---CEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHH
Confidence 344555566665 5667777 9999999995 598888887653 3 2589999875444
Q ss_pred CCC-CCCChhhhccccccCCcCCcccC--CCHHHHhcccCCcEEEeecCCCCC-CCHHHHHHhhhcCCCCCeEEecCCCC
Q 007456 372 KER-KNLDPAAAPFAKDPGDFMGLREG--ASLLEVVRKVKPHVLLGLSGVGGV-FNEEVLKAMRESDSVKPAIFAMSNPT 447 (603)
Q Consensus 372 ~~r-~~l~~~k~~fa~~~~~~~~~~~~--~~L~e~V~~vkptvLIG~S~~~g~-Ft~evv~~M~~~~~erPIIF~LSNPt 447 (603)
..| ..+... ++..... ... .+|.++++. .|++|++.+.++. +|.++|+ +.-+|+=++.|-
T Consensus 215 ~~ra~~la~~----~~~~t~~---~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk-------~GavVIDVgi~r 278 (320)
T 1edz_A 215 FTRGESLKLN----KHHVEDL---GEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK-------EGAVCINFACTK 278 (320)
T ss_dssp EESCCCSSCC----CCEEEEE---EECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC-------TTEEEEECSSSC
T ss_pred HhHHHHHhhh----ccccccc---ccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC-------CCeEEEEcCCCc
Confidence 433 223210 1110000 001 469999998 7999999998887 9988864 234666666654
No 32
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=93.54 E-value=0.33 Score=53.07 Aligned_cols=123 Identities=20% Similarity=0.267 Sum_probs=85.5
Q ss_pred CCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC
Q 007456 295 DIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER 374 (603)
Q Consensus 295 DiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r 374 (603)
.+.|+......|+ .+.++..+.. .+++|+|.|..|.++|+.+... |+ +++.+|++..
T Consensus 235 ~~~~~~~~l~~gw---~r~~~~~l~G---ktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----- 291 (479)
T 1v8b_A 235 NVYGCRHSLPDGL---MRATDFLISG---KIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----- 291 (479)
T ss_dssp HHHHHHHHHHHHH---HHHHCCCCTT---SEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH-----
T ss_pred chHhHHHHHhhhh---hhccccccCC---CEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh-----
Confidence 4445555555663 2567777777 9999999999999999988764 43 6888887521
Q ss_pred CCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCH
Q 007456 375 KNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTA 454 (603)
Q Consensus 375 ~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tp 454 (603)
... ..+...- ...+|.|+++. .|++|.+....+.++++.++.|. +.-||.=.|.-.. |+.-
T Consensus 292 ----~~~-~a~~~g~------~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK----~gailiNvgrg~~--EId~ 352 (479)
T 1v8b_A 292 ----CAI-QAVMEGF------NVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK----NNAVVGNIGHFDD--EIQV 352 (479)
T ss_dssp ----HHH-HHHTTTC------EECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC----TTCEEEECSSTTT--SBCH
T ss_pred ----hHH-HHHHcCC------EecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC----CCcEEEEeCCCCc--cccc
Confidence 000 1111100 12479999987 79999997778999999999993 5678887887554 6666
Q ss_pred HHHhc
Q 007456 455 ADAFK 459 (603)
Q Consensus 455 eda~~ 459 (603)
++..+
T Consensus 353 ~aL~~ 357 (479)
T 1v8b_A 353 NELFN 357 (479)
T ss_dssp HHHHT
T ss_pred hhhhc
Confidence 66655
No 33
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=93.24 E-value=0.1 Score=53.61 Aligned_cols=158 Identities=16% Similarity=0.226 Sum_probs=106.1
Q ss_pred cCCCCCceeeEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhC--CCe---EEEeecCCCchHHHHH
Q 007456 208 AGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARW--PKA---IVQFEDFQMKWAFETL 282 (603)
Q Consensus 208 gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~--P~~---~Iq~EDf~~~naf~iL 282 (603)
-||+ +.-+.|+-.|.. +|+.+.+.++- |++ ++|+==.+.-+..+++
T Consensus 60 ~Gi~---~~~~~lp~~~s~--------------------------~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~ 110 (281)
T 2c2x_A 60 VGIT---SIRRDLPADIST--------------------------ATLNETIDELNANPDCTGYIVQLPLPKHLDENAAL 110 (281)
T ss_dssp HTCE---EEEEEECTTCCH--------------------------HHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHH
T ss_pred cCCE---EEEEECCCCCCH--------------------------HHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHH
Confidence 6888 777777765542 45555665554 644 7777555555555666
Q ss_pred HHHh--hcCCcccc--------CCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcch-hHHHHHHHHHHHHHHhc-
Q 007456 283 ERYR--KRFCMFND--------DIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGS-AGLGVLKMAVQAAARMA- 350 (603)
Q Consensus 283 ~ryr--~~~~~FnD--------DiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGs-Ag~GiA~li~~~~~~~~- 350 (603)
+.-. +.+=.||. ...+-.-+|-.|++-.++-.+.+++. .++|++|+|. .|.-+|.++... .
T Consensus 111 ~~I~p~KDVDG~~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~~i~l~g---k~vvVvG~s~iVG~p~A~lL~~~----g~ 183 (281)
T 2c2x_A 111 ERVDPAKDADGLHPTNLGRLVLGTPAPLPCTPRGIVHLLRRYDISIAG---AHVVVIGRGVTVGRPLGLLLTRR----SE 183 (281)
T ss_dssp HHSCGGGBTTSCCHHHHHHHHHTCCCCCCHHHHHHHHHHHHTTCCCTT---CEEEEECCCTTTHHHHHHHHTST----TT
T ss_pred hhcCccCCccCCChhhHHHHhCCCCCCCCChHHHHHHHHHHcCCCCCC---CEEEEECCCcHHHHHHHHHHhcC----CC
Confidence 5442 22222221 11244566778889999999988888 9999999996 588888777542 1
Q ss_pred CCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHh
Q 007456 351 GNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAM 430 (603)
Q Consensus 351 Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M 430 (603)
| ..+++++|+ ..+|.+.++. .|++|+..+.++.+|+|+||
T Consensus 184 ~-------atVtv~h~~-----------------------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk-- 223 (281)
T 2c2x_A 184 N-------ATVTLCHTG-----------------------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR-- 223 (281)
T ss_dssp C-------CEEEEECTT-----------------------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC--
T ss_pred C-------CEEEEEECc-----------------------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC--
Confidence 2 357777532 1358889988 79999999999999998874
Q ss_pred hhcCCCCCeEEecCCC
Q 007456 431 RESDSVKPAIFAMSNP 446 (603)
Q Consensus 431 ~~~~~erPIIF~LSNP 446 (603)
+.-+|+=++-|
T Consensus 224 -----~GavVIDVgi~ 234 (281)
T 2c2x_A 224 -----PGAAVIDVGVS 234 (281)
T ss_dssp -----TTCEEEECCEE
T ss_pred -----CCcEEEEccCC
Confidence 34577777755
No 34
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.13 E-value=0.21 Score=50.25 Aligned_cols=100 Identities=15% Similarity=0.238 Sum_probs=66.9
Q ss_pred HHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCC
Q 007456 311 VRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGD 390 (603)
Q Consensus 311 ~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~ 390 (603)
++..+..+.. .+++|+|+|..|..+|+.+... |. +++.+|+.- . .+...+ .+ ...
T Consensus 148 ~~~~~~~l~g---~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~--~~~~~~-~~---g~~ 202 (300)
T 2rir_A 148 IQHTDYTIHG---SQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----A--HLARIT-EM---GLV 202 (300)
T ss_dssp HHTCSSCSTT---SEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----H--HHHHHH-HT---TCE
T ss_pred HHhcCCCCCC---CEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----H--HHHHHH-HC---CCe
Confidence 3445666777 9999999999999999887643 43 688888752 0 011100 01 000
Q ss_pred cCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007456 391 FMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (603)
Q Consensus 391 ~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN 445 (603)
. ....+|.|+++. .|++|-+.. .+.++++.++.|. +..+|+=+|.
T Consensus 203 ~---~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk----~g~~lin~a~ 247 (300)
T 2rir_A 203 P---FHTDELKEHVKD--IDICINTIP-SMILNQTVLSSMT----PKTLILDLAS 247 (300)
T ss_dssp E---EEGGGHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC----TTCEEEECSS
T ss_pred E---EchhhHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC----CCCEEEEEeC
Confidence 0 012468888876 799997664 5899999998883 5678888886
No 35
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.65 E-value=0.62 Score=46.32 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=26.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 6899999999999999988764 54 68888874
No 36
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=92.65 E-value=1.2 Score=48.67 Aligned_cols=181 Identities=14% Similarity=0.127 Sum_probs=117.9
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CCeEEEeecCCCchH--HHHHHHHhhc--C--Ccc----------ccCCchhHHHHHHH
Q 007456 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRKR--F--CMF----------NDDIQGTAGVALAG 306 (603)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~~Iq~EDf~~~na--f~iL~ryr~~--~--~~F----------nDDiQGTaaV~lAg 306 (603)
+..|...|-..||..+.+.. |..-|-=+|++..-. --+.+.|+.. . .|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 45667778888888888654 887788899987422 2355677642 1 111 11223466555667
Q ss_pred HHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEecCCcccCCCCCCChh-----
Q 007456 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPA----- 380 (603)
Q Consensus 307 ll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~-lvD~~GLv~~~r~~l~~~----- 380 (603)
+-.+++..|.+|+. .||+|-|.|..|...|+.|.+. |. +++ +.|++|-|++.. .|+..
T Consensus 239 ~~~~l~~~G~~l~g---~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~-Gid~edl~~l 302 (470)
T 2bma_A 239 VLEVLKSLNIPVEK---QTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN-GFTHENLEFL 302 (470)
T ss_dssp HHHHHHTTTCCGGG---CEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS-CCCHHHHHHH
T ss_pred HHHHHHhccCCcCC---CEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC-CCCHHHHHHH
Confidence 77888888887777 9999999999999999988664 43 455 889998888753 34332
Q ss_pred ---h-------hccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007456 381 ---A-------APFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (603)
Q Consensus 381 ---k-------~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt~ 448 (603)
| ..|+...+ +. ...+-.+.. .++.||||=+.. ++..|++-++.+.+ +.-.||.--+| |+.
T Consensus 303 ~~~k~~~~g~v~~~~~~~~---~a-~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~--~~ak~V~EgAN~p~T 373 (470)
T 2bma_A 303 IDLKEEKKGRIKEYLNHSS---TA-KYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK--NGCILVGEGANMPST 373 (470)
T ss_dssp HHHHTTTTCCGGGGGGTCS---SC-EECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH--TTCCEEECCSSSCBC
T ss_pred HHHHHhcCCcHHHHHhhcC---Cc-EEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh--cCcEEEEeCCCCCCC
Confidence 1 11221000 00 000001222 568999998774 79999999999953 45679998888 653
No 37
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=92.56 E-value=0.38 Score=50.65 Aligned_cols=166 Identities=19% Similarity=0.205 Sum_probs=102.4
Q ss_pred ChhhhhHhHHHHHHHHHHhCCCeEEEeecCCCchH--HHHHHHHhhc--CC-cc---ccCCchhHHHHHHHHHHHHHHhC
Q 007456 244 EGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWA--FETLERYRKR--FC-MF---NDDIQGTAGVALAGLLGTVRAQG 315 (603)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~P~~~Iq~EDf~~~na--f~iL~ryr~~--~~-~F---nDDiQGTaaV~lAgll~A~r~tg 315 (603)
+..+-++++..|.+++..+.-. -|-=+|++..-. --+.++|+-- -+ .+ .|=-.-||-=+.-++-.+++..|
T Consensus 91 s~~~~e~~~r~~~~~~~~l~g~-~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G 169 (355)
T 1c1d_A 91 DPSTWARILRIHAENIDKLSGN-YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRG 169 (355)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTS-EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred ChhhHHHHHHHHHHHHHHhcCC-cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 3345567888888888887632 567789976431 1234444311 01 11 11112255555566777788888
Q ss_pred C-CCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCc
Q 007456 316 L-SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGL 394 (603)
Q Consensus 316 ~-~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~ 394 (603)
. +|+. .+++|.|.|..|..+|+.+... |. ++++.|++ +....|++...
T Consensus 170 ~~~L~G---ktV~I~G~GnVG~~~A~~l~~~-----Ga-------kVvvsD~~-----------~~~~~~a~~~g----- 218 (355)
T 1c1d_A 170 LGSLDG---LTVLVQGLGAVGGSLASLAAEA-----GA-------QLLVADTD-----------TERVAHAVALG----- 218 (355)
T ss_dssp CCCSTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC-----------HHHHHHHHHTT-----
T ss_pred CCCCCC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEeCC-----------ccHHHHHHhcC-----
Confidence 7 6777 9999999999999999877543 53 67788874 11122332110
Q ss_pred ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007456 395 REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (603)
Q Consensus 395 ~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt~ 448 (603)
....++.|+.+ ++.|+|+=+. ..+.++++-++.|. -.||.--+| |+.
T Consensus 219 a~~v~~~ell~-~~~DIliP~A-~~~~I~~~~~~~lk-----~~iVie~AN~p~t 266 (355)
T 1c1d_A 219 HTAVALEDVLS-TPCDVFAPCA-MGGVITTEVARTLD-----CSVVAGAANNVIA 266 (355)
T ss_dssp CEECCGGGGGG-CCCSEEEECS-CSCCBCHHHHHHCC-----CSEECCSCTTCBC
T ss_pred CEEeChHHhhc-CccceecHhH-HHhhcCHHHHhhCC-----CCEEEECCCCCCC
Confidence 01123344433 4679999544 57999999999992 468888887 643
No 38
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=92.54 E-value=1.8 Score=46.56 Aligned_cols=183 Identities=15% Similarity=0.175 Sum_probs=115.9
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CCeEEEeecCCCch--HHHHHHHHhhc-----CCccccC----------CchhHHHHHH
Q 007456 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKW--AFETLERYRKR-----FCMFNDD----------IQGTAGVALA 305 (603)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~~Iq~EDf~~~n--af~iL~ryr~~-----~~~FnDD----------iQGTaaV~lA 305 (603)
+.+|-..|...|+.++...- |+.-|-=+|++..- ---+.+.|+.. ..++--+ -.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 44566788999999998877 78778889998752 22245666431 1233222 2235555555
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEecCCcccCCCCCCChhh-hc
Q 007456 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERKNLDPAA-AP 383 (603)
Q Consensus 306 gll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~-lvD~~GLv~~~r~~l~~~k-~~ 383 (603)
++-.+++..|.+++. .||+|.|.|..|...|++|.+ +.|. +++ +.|++|-+++.. .|+... +.
T Consensus 195 ~~~~~~~~~g~~l~g---~~vaVqG~GnVG~~~a~~L~e----~~Ga-------kvVavsD~~G~i~dp~-Gld~~~l~~ 259 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKK---ATVAVQGFGNVGQFAALLISQ----ELGS-------KVVAVSDSRGGIYNPE-GFDVEELIR 259 (415)
T ss_dssp HHHHHHHHTTCCTTT---CEEEEECCSHHHHHHHHHHHH----TTCC-------EEEEEECSSCEEECTT-CCCHHHHHH
T ss_pred HHHHHHHHcCCCcCC---CEEEEECCcHHHHHHHHHHHH----hcCC-------EEEEEEeCCCeEECCC-CCCHHHHHH
Confidence 677788888998888 999999999999999988765 1343 444 899999988754 233321 11
Q ss_pred cccccCCcCCcc--cCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007456 384 FAKDPGDFMGLR--EGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (603)
Q Consensus 384 fa~~~~~~~~~~--~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt~ 448 (603)
+......+.+-+ ...+-.| +-.++.|+||=+.. ++..|++-.+.+ .-.+|.--+| |+.
T Consensus 260 ~~~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l-----~ak~V~EgAN~p~t 320 (415)
T 2tmg_A 260 YKKEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI-----KAKAVVEGANGPTT 320 (415)
T ss_dssp HHHHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC-----CCSEEECCSSSCBC
T ss_pred HHHhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc-----CCeEEEeCCCcccC
Confidence 111111111000 1123344 44678899997765 688888888877 2457777777 553
No 39
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.14 E-value=0.22 Score=51.71 Aligned_cols=100 Identities=23% Similarity=0.321 Sum_probs=61.7
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCH
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 400 (603)
+...+++|+|||.+|.+++..+... |. +++++|++- . .+...+..++....-. .....++
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~-----Ga-------~V~v~dr~~----~--r~~~~~~~~~~~~~~~--~~~~~~~ 224 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL-----GA-------QVQIFDINV----E--RLSYLETLFGSRVELL--YSNSAEI 224 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----H--HHHHHHHHHGGGSEEE--ECCHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCH----H--HHHHHHHhhCceeEee--eCCHHHH
Confidence 4459999999999999988877543 42 688888741 1 1222222222210000 0011246
Q ss_pred HHHhcccCCcEEEeecCCCCC-----CCHHHHHHhhhcCCCCCeEEecCCC
Q 007456 401 LEVVRKVKPHVLLGLSGVGGV-----FNEEVLKAMRESDSVKPAIFAMSNP 446 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~-----Ft~evv~~M~~~~~erPIIF~LSNP 446 (603)
.+.++. .|++|.+.+.++. ++++.++.|. +.-+|+-++.+
T Consensus 225 ~~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~----~g~~ivdv~~~ 269 (361)
T 1pjc_A 225 ETAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR----TGSVIVDVAVD 269 (361)
T ss_dssp HHHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC----TTCEEEETTCT
T ss_pred HHHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC----CCCEEEEEecC
Confidence 777765 7999998876553 5888898883 45577777753
No 40
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=92.01 E-value=1.1 Score=47.30 Aligned_cols=137 Identities=23% Similarity=0.323 Sum_probs=74.2
Q ss_pred hHHHHHHHHhhcCCccccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhh
Q 007456 277 WAFETLERYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAF 356 (603)
Q Consensus 277 naf~iL~ryr~~~~~FnDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~e 356 (603)
.++.+-++.+...... .++.+++.+++--+-++.+ ++.. .+++|+|+|..|..++..+... |.
T Consensus 129 ~a~~~~k~v~~~~~~~----~~~~s~a~~av~~a~~~~~-~l~g---~~VlIiGaG~iG~~~a~~l~~~-----G~---- 191 (404)
T 1gpj_A 129 RAINLGKRAREETRIS----EGAVSIGSAAVELAERELG-SLHD---KTVLVVGAGEMGKTVAKSLVDR-----GV---- 191 (404)
T ss_dssp HHHHHHHHHHHHSSTT----CSCCSHHHHHHHHHHHHHS-CCTT---CEEEEESCCHHHHHHHHHHHHH-----CC----
T ss_pred HHhhhhccCcchhhhc----CCCccHHHHHHHHHHHHhc-cccC---CEEEEEChHHHHHHHHHHHHHC-----CC----
Confidence 3677777766543221 1222233333222222222 3455 9999999999998888877653 54
Q ss_pred hcCeEEEEecCCcccCCCCCCChhhhcccccc-CCcCCcccCCCHHHHhcccCCcEEEeecCCC-CCCCHHHHHH--hhh
Q 007456 357 ARNKFFLLDKDGLITKERKNLDPAAAPFAKDP-GDFMGLREGASLLEVVRKVKPHVLLGLSGVG-GVFNEEVLKA--MRE 432 (603)
Q Consensus 357 A~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~-~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~-g~Ft~evv~~--M~~ 432 (603)
++|+++|+.. .+ . ..+++.- .+. -...++.+.++. .|++|-+++.+ ..++++.++. |..
T Consensus 192 --~~V~v~~r~~----~r--a----~~la~~~g~~~---~~~~~l~~~l~~--aDvVi~at~~~~~~~~~~~l~~~~lk~ 254 (404)
T 1gpj_A 192 --RAVLVANRTY----ER--A----VELARDLGGEA---VRFDELVDHLAR--SDVVVSATAAPHPVIHVDDVREALRKR 254 (404)
T ss_dssp --SEEEEECSSH----HH--H----HHHHHHHTCEE---CCGGGHHHHHHT--CSEEEECCSSSSCCBCHHHHHHHHHHC
T ss_pred --CEEEEEeCCH----HH--H----HHHHHHcCCce---ecHHhHHHHhcC--CCEEEEccCCCCceecHHHHHHHHHhc
Confidence 4799888741 00 1 1222210 000 012367888865 79999776544 4567888887 421
Q ss_pred cCCCCCeEEecCCCC
Q 007456 433 SDSVKPAIFAMSNPT 447 (603)
Q Consensus 433 ~~~erPIIF~LSNPt 447 (603)
+...+-+++-++.|.
T Consensus 255 r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 255 DRRSPILIIDIANPR 269 (404)
T ss_dssp SSCCCEEEEECCSSC
T ss_pred cCCCCEEEEEccCCC
Confidence 112333555555543
No 41
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=91.80 E-value=1.4 Score=46.72 Aligned_cols=223 Identities=16% Similarity=0.101 Sum_probs=131.6
Q ss_pred CCCe-EEEeecCCCchHHHHHHHHh-hcCCccccCCc---hhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHH
Q 007456 263 WPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLG 337 (603)
Q Consensus 263 ~P~~-~Iq~EDf~~~naf~iL~ryr-~~~~~FnDDiQ---GTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~G 337 (603)
.|+. .|+--..+..|- .+ +..+ ..+.+.|.--- .+|=-+++.+|+..|-.|..|.+ .+|.|+|.|..|..
T Consensus 56 ~~~Lk~I~~~~~G~D~i-D~-~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g---~tvGIIGlG~IG~~ 130 (380)
T 2o4c_A 56 GSPVRFVGTCTIGTDHL-DL-DYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAE---RTYGVVGAGQVGGR 130 (380)
T ss_dssp TSCCCEEEECSSCSTTB-CH-HHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGG---CEEEEECCSHHHHH
T ss_pred CCCceEEEEcCcccchh-hH-HHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCC---CEEEEEeCCHHHHH
Confidence 4887 888888888773 22 2223 34777775433 34445899999999998888877 99999999999999
Q ss_pred HHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec-
Q 007456 338 VLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS- 416 (603)
Q Consensus 338 iA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S- 416 (603)
+|+.+... |+ +++.+|+..- ... ... ...+|.|+++. .|+++=.-
T Consensus 131 vA~~l~~~-----G~-------~V~~~d~~~~-----------~~~---~g~------~~~~l~ell~~--aDvV~l~~P 176 (380)
T 2o4c_A 131 LVEVLRGL-----GW-------KVLVCDPPRQ-----------ARE---PDG------EFVSLERLLAE--ADVISLHTP 176 (380)
T ss_dssp HHHHHHHT-----TC-------EEEEECHHHH-----------HHS---TTS------CCCCHHHHHHH--CSEEEECCC
T ss_pred HHHHHHHC-----CC-------EEEEEcCChh-----------hhc---cCc------ccCCHHHHHHh--CCEEEEecc
Confidence 99988653 44 6888886421 000 000 12479999987 79887532
Q ss_pred --C-----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeccccc
Q 007456 417 --G-----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQA 489 (603)
Q Consensus 417 --~-----~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~ 489 (603)
. ..+.|+++.++.|. +..++.=.|+-..--|-.-.+|++ +|+..-|.=-=|.+-... ..... +
T Consensus 177 lt~~g~~~T~~li~~~~l~~mk----~gailIN~sRG~vvd~~aL~~aL~--~g~i~~A~LDV~~~EP~~-~~~l~--~- 246 (380)
T 2o4c_A 177 LNRDGEHPTRHLLDEPRLAALR----PGTWLVNASRGAVVDNQALRRLLE--GGADLEVALDVWEGEPQA-DPELA--A- 246 (380)
T ss_dssp CCSSSSSCCTTSBCHHHHHTSC----TTEEEEECSCGGGBCHHHHHHHHH--TTCCEEEEESCCTTTTSC-CHHHH--T-
T ss_pred CccccccchhhhcCHHHHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCCceEEeeeeccCCCC-chhhc--c-
Confidence 1 34789999999993 567888777633322222233333 555443321111100001 11112 2
Q ss_pred cccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCCCCC-CCCCccccC
Q 007456 490 NNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEE-IPKGILYPS 539 (603)
Q Consensus 490 NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~~~~-l~~g~l~P~ 539 (603)
+|+.+-|=++--... --..|...+++.|......+. ..-..++|.
T Consensus 247 ~nvi~TPHiag~t~e-----~~~~~~~~~~~nl~~~l~g~~~~~~~~~~p~ 292 (380)
T 2o4c_A 247 RCLIATPHIAGYSLE-----GKLRGTAQIYQAYCAWRGIAERVSLQDVLPE 292 (380)
T ss_dssp TCSEECSSCTTCCHH-----HHHHHHHHHHHHHHHHHTCCCCCCGGGTCCC
T ss_pred CCEEEccccCcCCHH-----HHHHHHHHHHHHHHHHHcCCCccchhhcCCC
Confidence 478888877532111 123455566666766654332 222345554
No 42
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.41 E-value=0.21 Score=50.82 Aligned_cols=99 Identities=13% Similarity=0.149 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhCCCe-EEEeecCCCchHHHHHHHHhhc------C-CccccC--CchhHHHHHHHHHHHHHHhCCCCCCC
Q 007456 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-CMFNDD--IQGTAGVALAGLLGTVRAQGLSLTDF 321 (603)
Q Consensus 252 vdefv~av~~~~P~~-~Iq~EDf~~~naf~iL~ryr~~------~-~~FnDD--iQGTaaV~lAgll~A~r~tg~~l~dl 321 (603)
+.+|++.++. +++ .++.--=-...++++||+.-.. + ++.++| ..|.-.= ..|++.+++-.|.+++.
T Consensus 47 l~~~v~~l~~--~~~~G~nVTiP~K~~v~~~ld~ls~~A~~iGAVNTv~~~~g~l~G~NTD-~~G~~~~L~~~~~~~~~- 122 (282)
T 3fbt_A 47 LKESVDTFKI--IKCGGLNVTIPYKVEVMKELYEISEKARKIGAVNTLKFSREGISGFNTD-YIGFGKMLSKFRVEIKN- 122 (282)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTCTTGGGGGCSEECHHHHHHTCCCEEEECSSCEEEECCH-HHHHHHHHHHTTCCCTT-
T ss_pred HHHHHHHHhc--CCCCEEEEcCCCHHHHHHHHHhcCHHHHHcCCcceEEeeCCEEEeeCCc-HHHHHHHHHHcCCCccC-
Confidence 5566666654 333 4443332224556665554322 1 233322 2232211 26889999888888888
Q ss_pred CCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 123 --k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt 155 (282)
T 3fbt_A 123 --NICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN 155 (282)
T ss_dssp --SEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred --CEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 999999999888887777655 354 579988874
No 43
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.36 E-value=1.3 Score=45.81 Aligned_cols=195 Identities=13% Similarity=0.097 Sum_probs=101.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC-cccCCCCCCChhhhcccccc---CC------cCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG-LITKERKNLDPAAAPFAKDP---GD------FMG 393 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G-Lv~~~r~~l~~~k~~fa~~~---~~------~~~ 393 (603)
.||.|+|||..|.|||..++.+ |+ ++.++|.+= .+.+.++.+......+.+.. .. ...
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~ 74 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSL 74 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHT
T ss_pred CeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhh
Confidence 7899999999999999887664 65 588888631 00000000110000010000 00 000
Q ss_pred cccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccC--CcEEEEcCC
Q 007456 394 LREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG--ENIVFASGS 471 (603)
Q Consensus 394 ~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~--Grai~AtGS 471 (603)
.....+|.|+++. .|.+|=+-.--=..++++.+.+. ++++.-.||+ ||=.+ ..+.+..+.+. .|+|.. -
T Consensus 75 i~~~~~l~~a~~~--ad~ViEav~E~l~iK~~lf~~l~-~~~~~~aIla-SNTSs---l~is~ia~~~~~p~r~ig~--H 145 (319)
T 3ado_A 75 ISSCTNLAEAVEG--VVHIQECVPENLDLKRKIFAQLD-SIVDDRVVLS-SSSSC---LLPSKLFTGLAHVKQCIVA--H 145 (319)
T ss_dssp EEEECCHHHHTTT--EEEEEECCCSCHHHHHHHHHHHH-TTCCSSSEEE-ECCSS---CCHHHHHTTCTTGGGEEEE--E
T ss_pred cccccchHhHhcc--CcEEeeccccHHHHHHHHHHHHH-HHhhhcceee-hhhhh---ccchhhhhhccCCCcEEEe--c
Confidence 0124578888887 57776433222236678888884 4777777775 44333 44554444332 455554 5
Q ss_pred CCCceecCCCeeeccccccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCCCCCCCCCccccCCCCcchhhHHHH
Q 007456 472 PFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVG 551 (603)
Q Consensus 472 Pf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~~~~l~~g~l~P~l~~ir~Vs~~VA 551 (603)
||.|+.+-.=....|+. . |+.=.++.+.+++..+-. ..+.-.-+..-=|.-++-
T Consensus 146 ffNP~~~m~LVEiv~g~--------------------~-Ts~~~~~~~~~~~~~~gk-----~pv~v~kd~pGFi~NRl~ 199 (319)
T 3ado_A 146 PVNPPYYIPLVELVPHP--------------------E-TSPATVDRTHALMRKIGQ-----SPVRVLKEIDGFVLNRLQ 199 (319)
T ss_dssp ECSSTTTCCEEEEEECT--------------------T-CCHHHHHHHHHHHHHTTC-----EEEECSSCCTTTTHHHHH
T ss_pred CCCCccccchHHhcCCC--------------------C-CcHHHHHHHHHHHHHhCC-----ccCCcCCCCCCEeHHHHH
Confidence 88888652111222222 2 444456677777765531 111111111123566677
Q ss_pred HHHHHHH---HHcCccC
Q 007456 552 AAVLRAA---VEEDLAE 565 (603)
Q Consensus 552 ~AVa~~A---~~~G~A~ 565 (603)
.+....| +++|+|+
T Consensus 200 ~~~~~EA~~lv~eGvas 216 (319)
T 3ado_A 200 YAIISEAWRLVEEGIVS 216 (319)
T ss_dssp HHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 7766655 5788876
No 44
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=91.22 E-value=0.24 Score=50.25 Aligned_cols=142 Identities=14% Similarity=0.110 Sum_probs=77.0
Q ss_pred HHHHHHHHHHhCCCe-EEEeecCCCchHHHHHHHHhhc------C-Ccccc-CC--chhHHHHHHHHHHHHHHhCCCCCC
Q 007456 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-CMFND-DI--QGTAGVALAGLLGTVRAQGLSLTD 320 (603)
Q Consensus 252 vdefv~av~~~~P~~-~Iq~EDf~~~naf~iL~ryr~~------~-~~FnD-Di--QGTaaV~lAgll~A~r~tg~~l~d 320 (603)
+++|++.++. +++ .++.-==-...++++||+.-+. + ++.++ |- .|.-.= ..|++.+++-.+.+++.
T Consensus 51 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~lD~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~l~~~~~~l~~ 127 (283)
T 3jyo_A 51 LKTLLDAALY--LGFNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVIDATGHTTGHNTD-VSGFGRGMEEGLPNAKL 127 (283)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTCTTTTGGGSSEECHHHHHHTCCCEEEECTTSCEEEECHH-HHHHHHHHHHHCTTCCC
T ss_pred HHHHHHHHhh--CCCCEEEECcccHHHHHHHhhhCCHHHHHhCcceEEEECCCCeEEEecCC-HHHHHHHHHHhCcCcCC
Confidence 5677776664 333 4443332334455555543322 1 34444 42 342221 35788888888877777
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCC-cccCCC
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMG-LREGAS 399 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~-~~~~~~ 399 (603)
.+++|+|||.+|.+++..|.. .|. ++|+++|+.- + ......+.+........- .....+
T Consensus 128 ---k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~~----~--~a~~la~~~~~~~~~~~i~~~~~~~ 187 (283)
T 3jyo_A 128 ---DSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLDT----S--RAQALADVINNAVGREAVVGVDARG 187 (283)
T ss_dssp ---SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSSH----H--HHHHHHHHHHHHHTSCCEEEECSTT
T ss_pred ---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECCH----H--HHHHHHHHHHhhcCCceEEEcCHHH
Confidence 999999999776666655544 454 4799888751 1 111111122111000000 001236
Q ss_pred HHHHhcccCCcEEEeecCC
Q 007456 400 LLEVVRKVKPHVLLGLSGV 418 (603)
Q Consensus 400 L~e~V~~vkptvLIG~S~~ 418 (603)
|.++++. +|++|-++..
T Consensus 188 l~~~l~~--~DiVInaTp~ 204 (283)
T 3jyo_A 188 IEDVIAA--ADGVVNATPM 204 (283)
T ss_dssp HHHHHHH--SSEEEECSST
T ss_pred HHHHHhc--CCEEEECCCC
Confidence 8888887 7999987753
No 45
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=91.17 E-value=0.25 Score=51.08 Aligned_cols=50 Identities=18% Similarity=0.397 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 304 lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
-.|++.+++-.+.+++. .+++|+|||.+|.+||..|.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~g---k~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIG---KKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTT---SEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccC---CEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 35688888888888888 999999999666666665544 454 579999885
No 46
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=91.04 E-value=1 Score=44.79 Aligned_cols=86 Identities=21% Similarity=0.250 Sum_probs=58.8
Q ss_pred eEEEeecCCCchHHHHHHHHhhc-C----CccccCCchhHHHHHHHHHHHHHHh-CCCCCCCCCceEEEeC-cchhHHHH
Q 007456 266 AIVQFEDFQMKWAFETLERYRKR-F----CMFNDDIQGTAGVALAGLLGTVRAQ-GLSLTDFADQKIVVVG-AGSAGLGV 338 (603)
Q Consensus 266 ~~Iq~EDf~~~naf~iL~ryr~~-~----~~FnDDiQGTaaV~lAgll~A~r~t-g~~l~dl~~~riv~~G-AGsAg~Gi 338 (603)
..+.++-+.-..+.+++++-+.. + ++...|..|.- ..-.|++.+++-. +.+++. .+++|.| +|.+|.++
T Consensus 60 t~~~~~G~~~~~~~~~~~~~~~~~~gavnt~~~~~~~G~n-Td~~g~~~~l~~~~~~~l~g---k~vlVtGaaGGiG~ai 135 (287)
T 1lu9_A 60 TAIFVGGGDMAAGERVFEAVKKRFFGPFRVSCMLDSNGSN-TTAAAGVALVVKAAGGSVKG---KKAVVLAGTGPVGMRS 135 (287)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHCBTTBCCEEEECSTTHH-HHHHHHHHHHHHHTTSCCTT---CEEEEETCSSHHHHHH
T ss_pred ceEEEccchHHHHHHHHHHHHHhcCCCeEEEEecCCCcCC-chHHHHHHHHHHhhccCCCC---CEEEEECCCcHHHHHH
Confidence 35556666666889999988754 1 22334555532 2356677777766 676777 9999999 88888888
Q ss_pred HHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 339 LKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 339 A~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+..+.+ .|. +++++|++
T Consensus 136 a~~L~~-----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 136 AALLAG-----EGA-------EVVLCGRK 152 (287)
T ss_dssp HHHHHH-----TTC-------EEEEEESS
T ss_pred HHHHHH-----CcC-------EEEEEECC
Confidence 877765 343 48888875
No 47
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=91.01 E-value=0.25 Score=50.99 Aligned_cols=49 Identities=20% Similarity=0.460 Sum_probs=37.7
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.|++.+++-.+.+++. .+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 133 ~Gf~~~L~~~~~~l~g---k~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt 181 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRG---KTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHhcCCCcCC---CEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC
Confidence 4678888877887777 999999999777777666654 454 479998884
No 48
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=90.94 E-value=0.47 Score=52.09 Aligned_cols=100 Identities=20% Similarity=0.250 Sum_probs=72.5
Q ss_pred HHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCc
Q 007456 312 RAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF 391 (603)
Q Consensus 312 r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~ 391 (603)
+.+|..+.. .+++|+|.|..|.++|+.+... |+ +++.+|++.. ... .......
T Consensus 269 ~~~g~~L~G---ktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~~~---------~~~-~a~~~G~-- 321 (494)
T 3d64_A 269 RATDVMIAG---KIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEIDPI---------CAL-QAAMEGY-- 321 (494)
T ss_dssp HHHCCCCTT---CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSCHH---------HHH-HHHTTTC--
T ss_pred hccccccCC---CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCChH---------hHH-HHHHcCC--
Confidence 567887777 9999999999999999987643 43 6888887521 000 0001100
Q ss_pred CCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 392 MGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 392 ~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
...+|.|+++. .|++|.+....+.++++.++.|. +.-||.=.|....
T Consensus 322 ----~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK----~gAilINvgrg~v 368 (494)
T 3d64_A 322 ----RVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR----HNAIVCNIGHFDS 368 (494)
T ss_dssp ----EECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC----TTEEEEECSSSSC
T ss_pred ----EeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC----CCcEEEEcCCCcc
Confidence 12479999987 79999987778999999999993 5678887887544
No 49
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.87 E-value=0.55 Score=49.05 Aligned_cols=95 Identities=18% Similarity=0.259 Sum_probs=61.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.||.|+|.|..|..+|..|.+. |. +++++|+.- +....++.... ....++.|+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-----G~-------~V~v~dr~~----------~~~~~l~~~g~-----~~~~s~~e~ 75 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-----GH-------ECVVYDLNV----------NAVQALEREGI-----AGARSIEEF 75 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCH----------HHHHHHHTTTC-----BCCSSHHHH
T ss_pred CEEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCCH----------HHHHHHHHCCC-----EEeCCHHHH
Confidence 8999999999999999888764 42 577777641 11112222111 123578888
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007456 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (603)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt 447 (603)
++.. +||++| ++...+ -.+++++.+.....+.-||.-+||-.
T Consensus 76 ~~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 76 CAKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred HhcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 8774 568776 332334 67788887755445677888888754
No 50
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.69 E-value=1.4 Score=48.27 Aligned_cols=109 Identities=18% Similarity=0.243 Sum_probs=74.6
Q ss_pred HHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCc
Q 007456 312 RAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF 391 (603)
Q Consensus 312 r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~ 391 (603)
|.++..+.. .+|+|+|+|..|.++|..+... |. +++.+|++ +.+...|+...
T Consensus 266 r~~~~~l~G---ktV~IiG~G~IG~~~A~~lka~-----Ga-------~Viv~d~~-----------~~~~~~A~~~G-- 317 (494)
T 3ce6_A 266 RGTDALIGG---KKVLICGYGDVGKGCAEAMKGQ-----GA-------RVSVTEID-----------PINALQAMMEG-- 317 (494)
T ss_dssp HHHCCCCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC-----------HHHHHHHHHTT--
T ss_pred hccCCCCCc---CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCC-----------HHHHHHHHHcC--
Confidence 445656667 9999999999999998877543 42 68888764 22222222110
Q ss_pred CCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007456 392 MGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 459 (603)
Q Consensus 392 ~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~ 459 (603)
....++.|+++. .|++|-+++..+.++++.++.|. +.-+|.-.+.... |+..+..+.
T Consensus 318 ---a~~~~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk----~ggilvnvG~~~~--eId~~aL~~ 374 (494)
T 3ce6_A 318 ---FDVVTVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK----DHAILGNIGHFDN--EIDMAGLER 374 (494)
T ss_dssp ---CEECCHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC----TTCEEEECSSSGG--GBCHHHHHH
T ss_pred ---CEEecHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC----CCcEEEEeCCCCC--ccCHHHHHH
Confidence 012468888876 79999988888899999999993 4667777777543 666555443
No 51
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=90.69 E-value=0.24 Score=50.25 Aligned_cols=99 Identities=23% Similarity=0.233 Sum_probs=60.2
Q ss_pred HHHHHHHHHHhCCCe-EEEeecCCCchHHHHHHHHhhc------C-C-ccccC--CchhHHHHHHHHHHHHHHhCCCCCC
Q 007456 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-C-MFNDD--IQGTAGVALAGLLGTVRAQGLSLTD 320 (603)
Q Consensus 252 vdefv~av~~~~P~~-~Iq~EDf~~~naf~iL~ryr~~------~-~-~FnDD--iQGTaaV~lAgll~A~r~tg~~l~d 320 (603)
++++++.++. +++ .++.--=-...++++||+.-+. + + +|++| ..|.-.= ..|++.+++-.|.+++.
T Consensus 50 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~L~~~~~~l~~ 126 (281)
T 3o8q_A 50 FTEAAKHFFA--QGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD-GEGLVQDLLAQQVLLKG 126 (281)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH-HHHHHHHHHHTTCCCTT
T ss_pred HHHHHHHHHh--CCCCEEEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH-HHHHHHHHHHhCCCccC
Confidence 5666666653 333 5544433344566666654332 1 2 34444 2332111 45788888888888877
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 127 ---k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 127 ---ATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred ---CEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 999999999777766665544 454 479988884
No 52
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.60 E-value=2.5 Score=43.42 Aligned_cols=129 Identities=12% Similarity=0.130 Sum_probs=68.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhh-------cccccc---CC---
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA-------PFAKDP---GD--- 390 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~-------~fa~~~---~~--- 390 (603)
+||.|+|+|..|.+||..+..+ |. +++++|++-= .+...+. .++... ..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~~------~~~~~~~~i~~~l~~l~~~G~~~g~~~~ 68 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEPR------QITGALENIRKEMKSLQQSGSLKGSLSA 68 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCHH------HHHHHHHHHHHHHHHHHHTTCCCSSSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCHH------HHHHHHHHHHHHHHHHHHcCccccccch
Confidence 7899999999999999988764 54 5888887411 0111100 000000 00
Q ss_pred ---cCCcccCCCHHHHhcccCCcEEEeecCCCC-CCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEE
Q 007456 391 ---FMGLREGASLLEVVRKVKPHVLLGLSGVGG-VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIV 466 (603)
Q Consensus 391 ---~~~~~~~~~L~e~V~~vkptvLIG~S~~~g-~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai 466 (603)
........++.|+++. .|++| .+.... .+.+++.+.+.+ +...-.|++ ||=++ .++.+..+......=
T Consensus 69 ~~~~~~i~~~~~~~eav~~--aDlVi-eavpe~~~~k~~v~~~l~~-~~~~~~Ii~-s~tS~---i~~~~la~~~~~~~r 140 (319)
T 2dpo_A 69 EEQLSLISSCTNLAEAVEG--VVHIQ-ECVPENLDLKRKIFAQLDS-IVDDRVVLS-SSSSC---LLPSKLFTGLAHVKQ 140 (319)
T ss_dssp HHHHHTEEEECCHHHHTTT--EEEEE-ECCCSCHHHHHHHHHHHHT-TCCSSSEEE-ECCSS---CCHHHHHTTCTTGGG
T ss_pred HHHhhceEEeCCHHHHHhc--CCEEE-EeccCCHHHHHHHHHHHHh-hCCCCeEEE-EeCCC---hHHHHHHHhcCCCCC
Confidence 0000123689999987 68877 332222 355677777754 443333443 44333 455555554432222
Q ss_pred EEcCCCCCceec
Q 007456 467 FASGSPFENVDL 478 (603)
Q Consensus 467 ~AtGSPf~pv~~ 478 (603)
|.-+-||.|+.+
T Consensus 141 ~ig~Hp~~P~~~ 152 (319)
T 2dpo_A 141 CIVAHPVNPPYY 152 (319)
T ss_dssp EEEEEECSSTTT
T ss_pred eEEeecCCchhh
Confidence 333458877754
No 53
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=90.59 E-value=0.28 Score=49.52 Aligned_cols=48 Identities=27% Similarity=0.507 Sum_probs=38.5
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
.|++.+++-.|.+++. .|++++|||-|+.+|+-.|.+ .|. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~---~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAG---KRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHHHhCCCccc---CeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCC
Confidence 3477888888888888 999999999998888766654 354 57999886
No 54
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=90.43 E-value=0.18 Score=54.89 Aligned_cols=45 Identities=22% Similarity=0.276 Sum_probs=31.0
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCC
Q 007456 424 EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP 472 (603)
Q Consensus 424 ~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSP 472 (603)
.++++.|. ++|+.-+++=.|||.. -+| +-+.++++=|+|=.+-||
T Consensus 140 ~~i~~~i~-~~~P~A~~in~tNP~~--i~t-~a~~~~~~~k~vGlC~~~ 184 (477)
T 3u95_A 140 LEIAEKMK-KMAPKAYLMQTANPVF--EIT-QAVRRWTGANIIGFCHGV 184 (477)
T ss_dssp HHHHHHHH-HHCTTCEEEECSSCHH--HHH-HHHHHHHCCCEEEECCGG
T ss_pred HHHHHHHH-hhCCCeEEEEecChHH--HHH-HHHHHhCCCCeEEECCCH
Confidence 68999995 4999999999999986 233 334555655555444333
No 55
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.27 E-value=0.45 Score=51.61 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=63.7
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
..+|.|+|+|..|..+|..|.+. |. +++++|+.- +....+.+.... .+.....++.|
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~~----------~~~~~l~~~~~~-~gi~~~~s~~e 71 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRSR----------EKTEEVIAENPG-KKLVPYYTVKE 71 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSSH----------HHHHHHHHHSTT-SCEEECSSHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCCH----------HHHHHHHhhCCC-CCeEEeCCHHH
Confidence 38999999999999999988653 53 577777641 111112111000 01112357888
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 403 ~V~~v-kptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
+++.. ++|++| ++-.++...+++++.+.....+.-||.-+||-.+
T Consensus 72 ~v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~ 117 (480)
T 2zyd_A 72 FVESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFF 117 (480)
T ss_dssp HHHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HHhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 88753 478777 4444556778888887543445668888998664
No 56
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=90.21 E-value=3.3 Score=42.27 Aligned_cols=165 Identities=16% Similarity=0.147 Sum_probs=101.1
Q ss_pred hCCCe-EEEeecCCCchHHHHHHHHhh-cCCccccCC---chhHHHHHHHHHHHHHHh---------C----CCCCCCCC
Q 007456 262 RWPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G----LSLTDFAD 323 (603)
Q Consensus 262 ~~P~~-~Iq~EDf~~~naf~iL~ryr~-~~~~FnDDi---QGTaaV~lAgll~A~r~t---------g----~~l~dl~~ 323 (603)
..|+. .|+.--.+..|- . ++..++ -+.+.|--- +.+|=-+++.+|+..|-. | ..-.+|.+
T Consensus 65 ~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g 142 (313)
T 2ekl_A 65 KGKKLKIIARAGIGLDNI-D-TEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAG 142 (313)
T ss_dssp HCTTCCEEEECSSCCTTB-C-HHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTT
T ss_pred hCCCCeEEEEcCCCCCcc-C-HHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 46887 888777777663 2 233333 477777543 334445788999888742 1 01124444
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.+|.|+|.|..|..+|+.+... |+ +++.+|+.. ...+ +.... . ...+|.|+
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~---------~~~~---~~~~g-~----~~~~l~el 193 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAM-----GM-------KVLAYDILD---------IREK---AEKIN-A----KAVSLEEL 193 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CHHH---HHHTT-C----EECCHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCCc---------chhH---HHhcC-c----eecCHHHH
Confidence 9999999999999999988653 43 688888741 1111 11100 0 12378999
Q ss_pred hcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcE
Q 007456 404 VRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENI 465 (603)
Q Consensus 404 V~~vkptvLIG~S~----~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Gra 465 (603)
++. .|+++=.-- ..+.++++.++.|. +..++.-.|.-..--|..-.+|++ +|+.
T Consensus 194 l~~--aDvVvl~~P~~~~t~~li~~~~l~~mk----~ga~lIn~arg~~vd~~aL~~aL~--~g~i 251 (313)
T 2ekl_A 194 LKN--SDVISLHVTVSKDAKPIIDYPQFELMK----DNVIIVNTSRAVAVNGKALLDYIK--KGKV 251 (313)
T ss_dssp HHH--CSEEEECCCCCTTSCCSBCHHHHHHSC----TTEEEEESSCGGGBCHHHHHHHHH--TTCE
T ss_pred Hhh--CCEEEEeccCChHHHHhhCHHHHhcCC----CCCEEEECCCCcccCHHHHHHHHH--cCCC
Confidence 887 788874421 34778899999993 567888888743322322334443 4544
No 57
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=90.04 E-value=0.25 Score=49.88 Aligned_cols=99 Identities=22% Similarity=0.262 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhCCCe-EEEeecCCCchHHHHHHHHhhc------C-CccccC--CchhHHHHHHHHHHH-HHHhCCCCCC
Q 007456 252 VDEFMEAVHARWPKA-IVQFEDFQMKWAFETLERYRKR------F-CMFNDD--IQGTAGVALAGLLGT-VRAQGLSLTD 320 (603)
Q Consensus 252 vdefv~av~~~~P~~-~Iq~EDf~~~naf~iL~ryr~~------~-~~FnDD--iQGTaaV~lAgll~A-~r~tg~~l~d 320 (603)
++++++.++. +++ .++..-=-...++++||+..+. + ++.++| ..|.-.= ..|++.+ ++-.|.+++.
T Consensus 44 l~~~~~~~~~--~~~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~~ 120 (272)
T 3pwz_A 44 FEAQVLQFRS--EGGKGMNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLRN 120 (272)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCTT
T ss_pred HHHHHHHHhh--CCCCEEEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCccC
Confidence 5667776664 333 5655443445566666654332 1 234333 3443222 3578888 8777777777
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 121 ---k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 121 ---RRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp ---SEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred ---CEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 999999999777666665544 454 479988874
No 58
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=89.98 E-value=0.28 Score=50.60 Aligned_cols=126 Identities=13% Similarity=0.158 Sum_probs=73.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||+.|.++|.++... |+- +++++|.+-=..+. ..++.+... +......+ ....++.|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~~------~V~L~D~~~~~~~~~~~~l~~~~~-~~~~~~~i---~~t~d~~e 74 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----ELA------DVVLYDVVKGMPEGKALDLSHVTS-VVDTNVSV---RAEYSYEA 74 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSSSSHHHHHHHHHHHHHH-HTTCCCCE---EEECSHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEECChhHHHHHHHHHHhhhh-ccCCCCEE---EEeCCHHH
Confidence 5899999999999999888763 441 39999986210000 011221111 11111011 11367988
Q ss_pred HhcccCCcEEEeecCCC---CC----------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc--
Q 007456 403 VVRKVKPHVLLGLSGVG---GV----------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA-- 461 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~----------------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt-- 461 (603)
+++. .|++|=+.+.| |. .-+++.+.|.+ +++.-+|+=.|||... +.+-+.+.+
T Consensus 75 a~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~vi~~tNP~~~---~t~~~~~~~~~ 148 (331)
T 1pzg_A 75 ALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKK-YCPKTFIIVVTNPLDC---MVKVMCEASGV 148 (331)
T ss_dssp HHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHHH---HHHHHHHHHCC
T ss_pred HhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEEcCchHH---HHHHHHHhcCC
Confidence 9988 68887554333 33 14678888854 7888888888999874 234444443
Q ss_pred CCcEEEEcC
Q 007456 462 GENIVFASG 470 (603)
Q Consensus 462 ~Grai~AtG 470 (603)
.-.-+|++|
T Consensus 149 ~~~rviG~g 157 (331)
T 1pzg_A 149 PTNMICGMA 157 (331)
T ss_dssp CGGGEEECC
T ss_pred ChhcEEecc
Confidence 223455665
No 59
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.97 E-value=0.46 Score=46.30 Aligned_cols=106 Identities=16% Similarity=0.256 Sum_probs=60.5
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc--cCCC-CCCCh-hhhccccccCCcCCccc
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI--TKER-KNLDP-AAAPFAKDPGDFMGLRE 396 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv--~~~r-~~l~~-~k~~fa~~~~~~~~~~~ 396 (603)
+...||.|+|+|..|.++|..|... |. +++++|++--- .+.. ..+.. ....++..... ..
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~-----G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 80 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADL-----GH-------EVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPH----VH 80 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCHHHHHTCC-------CCHHHHGGGSTT----CE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCc----ee
Confidence 3449999999999999999988764 42 68888875211 0000 00000 01122221100 12
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHh-hhcCCCCCeEEecCCCC
Q 007456 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAM-RESDSVKPAIFAMSNPT 447 (603)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M-~~~~~erPIIF~LSNPt 447 (603)
..++.|+++. +|++| ++. +.....++++.+ +. +-+..||.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lav-p~~~~~~~~~~i~~~-~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NAT-EGASSIAALTAAGAE-NLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECS-CGGGHHHHHHHHCHH-HHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-Ecc-CcHHHHHHHHHhhhh-hcCCCEEEECCCCC
Confidence 3579999987 78877 443 333334666655 32 22567999999985
No 60
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.87 E-value=0.17 Score=51.37 Aligned_cols=109 Identities=13% Similarity=0.204 Sum_probs=61.5
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhc
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAP 383 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~ 383 (603)
.|++.+++-.+.+++. .+++|+|||.+|.+++..|.+ .|. ++|+++++.. ++ ..+.
T Consensus 102 ~G~~~~L~~~~~~l~~---k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~~----~~a~~la----- 158 (277)
T 3don_A 102 IGYVNGLKQIYEGIED---AYILILGAGGASKGIANELYK-----IVR------PTLTVANRTM----SRFNNWS----- 158 (277)
T ss_dssp HHHHHHHHHHSTTGGG---CCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSCG----GGGTTCC-----
T ss_pred HHHHHHHHHhCCCcCC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCCH----HHHHHHH-----
Confidence 4577788888887777 999999999777777766654 454 4688888752 11 1121
Q ss_pred cccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCH--HHHHHhhhcCCCCCeEEecC-CCC
Q 007456 384 FAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNE--EVLKAMRESDSVKPAIFAMS-NPT 447 (603)
Q Consensus 384 fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~--evv~~M~~~~~erPIIF~LS-NPt 447 (603)
..... ....++.++++. .|++|-++.. |.... +.+. . +...+..+|+=++ ||.
T Consensus 159 --~~~~~----~~~~~~~~~~~~--aDiVInaTp~-Gm~~~~~~~l~-~-~~l~~~~~V~D~vY~P~ 214 (277)
T 3don_A 159 --LNINK----INLSHAESHLDE--FDIIINTTPA-GMNGNTDSVIS-L-NRLASHTLVSDIVYNPY 214 (277)
T ss_dssp --SCCEE----ECHHHHHHTGGG--CSEEEECCC--------CCSSC-C-TTCCSSCEEEESCCSSS
T ss_pred --Hhccc----ccHhhHHHHhcC--CCEEEECccC-CCCCCCcCCCC-H-HHcCCCCEEEEecCCCC
Confidence 11000 011346666666 7999976643 32211 0111 1 1134566777764 664
No 61
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=89.58 E-value=2.5 Score=46.54 Aligned_cols=185 Identities=18% Similarity=0.247 Sum_probs=114.4
Q ss_pred CCChhhhhHhHHHHHHHHHHh-C--CCeEEEeecCCCchH--HHHHHHHhhcCC---------ccccCC---------ch
Q 007456 242 RLEGEEYLSIVDEFMEAVHAR-W--PKAIVQFEDFQMKWA--FETLERYRKRFC---------MFNDDI---------QG 298 (603)
Q Consensus 242 R~~g~~Y~~~vdefv~av~~~-~--P~~~Iq~EDf~~~na--f~iL~ryr~~~~---------~FnDDi---------QG 298 (603)
..+..|-..|...||+.+.++ + |..-|-=+|++..-. --+.+.|+...- +--.-+ .-
T Consensus 135 ~~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eA 214 (501)
T 3mw9_A 135 NYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISA 214 (501)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTH
T ss_pred cCCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCc
Confidence 346678889999999999862 4 888888899987532 237788864321 111111 12
Q ss_pred hHHHHHHHHHH------HHHHhCC--CCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 299 TAGVALAGLLG------TVRAQGL--SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 299 TaaV~lAgll~------A~r~tg~--~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
||-=+.-++-+ +++..|. .|+. .||+|-|.|..|...|+.|.+. |. +-+-+.|++|-|
T Consensus 215 Tg~GV~~~~~~~l~~~~~~~~~G~~~~l~g---~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~i 280 (501)
T 3mw9_A 215 TGRGVFHGIENFINEASYMSILGMTPGFGD---KTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSI 280 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTTCCSSSTT---CEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEE
T ss_pred hHHHHHHHHHHHHhhhHHHHHcCCCCCcCC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceE
Confidence 33333333332 3445675 3666 9999999999999999988763 43 346689999999
Q ss_pred cCCCCCCChhhh-ccccccCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CC
Q 007456 371 TKERKNLDPAAA-PFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PT 447 (603)
Q Consensus 371 ~~~r~~l~~~k~-~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt 447 (603)
++.. +++..+. .+........+.+....+.+.+-.++.||||=+.. .+..|++-++.+ .-.||.--+| |+
T Consensus 281 yd~~-Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~-~n~I~~~na~~l-----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 281 WNPD-GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAAS-EKQLTKSNAPRV-----KAKIIAEGANGPT 352 (501)
T ss_dssp ECTT-CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSS-SCCBCTTTGGGC-----CCSEEECCSSSCB
T ss_pred ECCC-CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeeccc-cCccCHhHHHHc-----CceEEEeCCCCcC
Confidence 9754 3433221 11111000000000000011244678999998876 599999998887 3579998898 54
No 62
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=89.36 E-value=1.7 Score=46.27 Aligned_cols=187 Identities=16% Similarity=0.079 Sum_probs=112.3
Q ss_pred CCccccCC---chhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEe
Q 007456 289 FCMFNDDI---QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (603)
Q Consensus 289 ~~~FnDDi---QGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD 365 (603)
+.+.|.-- +.+|=-+++.+|+..|-.|..|.. .++.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 I~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~g---ktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d 149 (381)
T 3oet_A 85 IGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRD---RTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCD 149 (381)
T ss_dssp CEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGG---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred EEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCC---CEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEEC
Confidence 55555432 345556899999999999988888 9999999999999999988754 54 688888
Q ss_pred cCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC--------CCCCCCHHHHHHhhhcCCCC
Q 007456 366 KDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG--------VGGVFNEEVLKAMRESDSVK 437 (603)
Q Consensus 366 ~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~--------~~g~Ft~evv~~M~~~~~er 437 (603)
+..- ... .. ....+|.|+++. .|+++=.-- .-+.|+++.++.|. +.
T Consensus 150 ~~~~-----------~~~---~~------~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk----~g 203 (381)
T 3oet_A 150 PPRA-----------ARG---DE------GDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK----PG 203 (381)
T ss_dssp HHHH-----------HTT---CC------SCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC----TT
T ss_pred CChH-----------Hhc---cC------cccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC----CC
Confidence 6310 000 00 123579999987 688874321 35789999999993 57
Q ss_pred CeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeccccccccccchhhHHHHHHhCCcccCHHHHHH
Q 007456 438 PAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQ 517 (603)
Q Consensus 438 PIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~a 517 (603)
.|+.=.|.-..--|-.-.+|++ +|+...|.=-=|++-...+.. .. .+|.++-|=|+-....++ ..|...
T Consensus 204 ailIN~aRG~vvde~aL~~aL~--~g~i~gA~LDV~e~EP~~~~~-L~---~~~~i~TPHiag~t~e~~-----~~~~~~ 272 (381)
T 3oet_A 204 AILINACRGPVVDNAALLARLN--AGQPLSVVLDVWEGEPDLNVA-LL---EAVDIGTSHIAGYTLEGK-----ARGTTQ 272 (381)
T ss_dssp EEEEECSCGGGBCHHHHHHHHH--TTCCEEEEESCCTTTTSCCHH-HH---HHSSEECSSCTTCCHHHH-----HHHHHH
T ss_pred cEEEECCCCcccCHHHHHHHHH--hCCCeEEEeeccccCCCCcch-hh---hCCEEECCccCcCcHHHH-----HHHHHH
Confidence 8888888754432333334443 565544321111111011011 11 123566665543322222 345566
Q ss_pred HHHHHhccCC
Q 007456 518 AAECLASYMT 527 (603)
Q Consensus 518 AA~aLA~~v~ 527 (603)
+++.+.+...
T Consensus 273 ~~~~l~~~l~ 282 (381)
T 3oet_A 273 VFEAYSAFIG 282 (381)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHc
Confidence 6777777764
No 63
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=89.08 E-value=2.9 Score=42.81 Aligned_cols=147 Identities=18% Similarity=0.220 Sum_probs=92.1
Q ss_pred CCe-EEEeecCCCchHHHHHHHHhh-cCCccccCC---chhHHHHHHHHHHHHHHh---------CC-----C----CCC
Q 007456 264 PKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL-----S----LTD 320 (603)
Q Consensus 264 P~~-~Iq~EDf~~~naf~iL~ryr~-~~~~FnDDi---QGTaaV~lAgll~A~r~t---------g~-----~----l~d 320 (603)
|+. .|+.-..+..|- . ++..++ -+.+.|--- +.+|=-+++.+|+..|-. |. + -.+
T Consensus 75 ~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~ 152 (330)
T 2gcg_A 75 ANLKVISTMSVGIDHL-A-LDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYG 152 (330)
T ss_dssp TTCCEEEESSSCCTTB-C-HHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCC
T ss_pred CCceEEEECCcccccc-c-HHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcC
Confidence 777 888888887773 2 334433 477777643 334555789999887732 10 0 034
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCH
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 400 (603)
|.+.+|.|+|.|..|..+|+.+.. .|. +++.+|+..- .....+ .+ .. ...++
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~~------~~~~~~-~~---g~------~~~~l 204 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKP-----FGV-------QRFLYTGRQP------RPEEAA-EF---QA------EFVST 204 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGG-----GTC-------CEEEEESSSC------CHHHHH-TT---TC------EECCH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCCc------chhHHH-hc---Cc------eeCCH
Confidence 556999999999999999988754 354 5888886421 111111 10 00 11278
Q ss_pred HHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007456 401 LEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~----~~g~Ft~evv~~M~~~~~erPIIF~LSNP 446 (603)
.|+++. .|++|=.-. ..+.+++++++.|. +..++.-.|+=
T Consensus 205 ~e~l~~--aDvVi~~vp~~~~t~~~i~~~~~~~mk----~gailIn~srg 248 (330)
T 2gcg_A 205 PELAAQ--SDFIVVACSLTPATEGLCNKDFFQKMK----ETAVFINISRG 248 (330)
T ss_dssp HHHHHH--CSEEEECCCCCTTTTTCBSHHHHHHSC----TTCEEEECSCG
T ss_pred HHHHhh--CCEEEEeCCCChHHHHhhCHHHHhcCC----CCcEEEECCCC
Confidence 898887 788774321 24678888888883 45677766653
No 64
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.78 E-value=0.25 Score=50.66 Aligned_cols=36 Identities=25% Similarity=0.444 Sum_probs=31.2
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
|.+.||+|+|+|..|.-+|..|+.+.+ .+|.++|.+
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGV-----------G~i~lvD~D 69 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGI-----------GKLLLFDYD 69 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCC
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCC-----------CEEEEECCC
Confidence 334999999999999999999988744 689999987
No 65
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.77 E-value=0.44 Score=47.53 Aligned_cols=79 Identities=25% Similarity=0.357 Sum_probs=49.6
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccc
Q 007456 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA 385 (603)
Q Consensus 306 gll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa 385 (603)
|++.+++-. ++.+ +++|+|||.+|.+++..|.. .|. ++|+++|+.- ++ -+.++
T Consensus 97 G~~~~l~~~-----~~~~-~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~~----~k------a~~la 149 (253)
T 3u62_A 97 GVVKSLEGV-----EVKE-PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRTI----ER------AKALD 149 (253)
T ss_dssp HHHHHTTTC-----CCCS-SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESCH----HH------HHTCC
T ss_pred HHHHHHHhc-----CCCC-eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCCH----HH------HHHHH
Confidence 577777543 3566 99999999998888777665 354 4799998841 11 11222
Q ss_pred cccCCcCCcccCCCHHHHhcccCCcEEEeecC
Q 007456 386 KDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 417 (603)
Q Consensus 386 ~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~ 417 (603)
+.-.. ....++.++++. +|++|-++.
T Consensus 150 ~~~~~----~~~~~~~~~~~~--aDiVInatp 175 (253)
T 3u62_A 150 FPVKI----FSLDQLDEVVKK--AKSLFNTTS 175 (253)
T ss_dssp SSCEE----EEGGGHHHHHHT--CSEEEECSS
T ss_pred HHccc----CCHHHHHhhhcC--CCEEEECCC
Confidence 21100 012457888876 799997654
No 66
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.57 E-value=0.44 Score=48.29 Aligned_cols=49 Identities=16% Similarity=0.410 Sum_probs=37.6
Q ss_pred HHHHHHHHHhC-CCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 305 AGLLGTVRAQG-LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 305 Agll~A~r~tg-~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.|++.+++..+ .++.. .+++|+|||.+|.++|..|.. .|. ++|+++|+.
T Consensus 125 ~G~~~~l~~~~~~~l~~---~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~ 174 (297)
T 2egg_A 125 LGYVQALEEEMNITLDG---KRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT 174 (297)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS
T ss_pred HHHHHHHHHhCCCCCCC---CEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 67888888776 66767 999999999888777776654 354 479988874
No 67
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=88.45 E-value=1.3 Score=45.35 Aligned_cols=102 Identities=20% Similarity=0.221 Sum_probs=63.5
Q ss_pred eEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCccc---CCCH
Q 007456 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE---GASL 400 (603)
Q Consensus 325 riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~---~~~L 400 (603)
||+|+|| |..|..++..|+. .|+ -..++++|.+-. + .....+.+...... ... ..++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~------~~a~dL~~~~~~~~-l~~~~~t~d~ 62 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--P------GVAADLSHIETRAT-VKGYLGPEQL 62 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--H------HHHHHHTTSSSSCE-EEEEESGGGH
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--H------HHHHHHhccCcCce-EEEecCCCCH
Confidence 8999998 9999998876543 454 246999998741 0 01111111100000 011 1368
Q ss_pred HHHhcccCCcEEEeecCCC---C-----------CCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 401 LEVVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g-----------~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
.|+++. .|++|=+.+.+ | ...+++++.|.+ ++...+|+-.|||..
T Consensus 63 ~~a~~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~sNPv~ 121 (314)
T 1mld_A 63 PDCLKG--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQ-HCPDAMICIISNPVN 121 (314)
T ss_dssp HHHHTT--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECSSCHH
T ss_pred HHHhCC--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEECCCcc
Confidence 999988 69887444333 3 245667777754 788888888999986
No 68
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=88.43 E-value=2.3 Score=45.58 Aligned_cols=112 Identities=20% Similarity=0.238 Sum_probs=76.9
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CCeEEEeecCCCchHHH---HHHHHhh---cC-C---ccccCC----------chhHHH
Q 007456 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAFE---TLERYRK---RF-C---MFNDDI----------QGTAGV 302 (603)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~~Iq~EDf~~~naf~---iL~ryr~---~~-~---~FnDDi----------QGTaaV 302 (603)
+.+|-..|...|+.++...- |+.-|-=+|++.. ... +.+.|.+ .. + ++--+- .-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 44567788999999998877 7878888999874 222 3455543 21 2 333221 235555
Q ss_pred HHHHHHHHHHHhCCC-CCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEE-ecCCcc
Q 007456 303 ALAGLLGTVRAQGLS-LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLL-DKDGLI 370 (603)
Q Consensus 303 ~lAgll~A~r~tg~~-l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lv-D~~GLv 370 (603)
+.-++-.+++..|.+ |+. .++.|+|.|..|..+|+++.. ..|+ +++.+ |+.|-+
T Consensus 194 v~~~~~~~~~~~G~~~l~g---ktvgI~G~G~VG~~vA~~l~~----~~G~-------kVv~~sD~~g~~ 249 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKG---KTIAIQGYGNAGYYLAKIMSE----DFGM-------KVVAVSDSKGGI 249 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTT---CEEEEECCSHHHHHHHHHHHH----TTCC-------EEEEEECSSCEE
T ss_pred HHHHHHHHHHHhCCcccCC---CEEEEEcCCHHHHHHHHHHHH----hcCC-------EEEEEeCCCccc
Confidence 566777888888987 777 999999999999999988765 0244 45544 887643
No 69
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.41 E-value=0.51 Score=46.90 Aligned_cols=49 Identities=22% Similarity=0.335 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 304 lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
-.|++.+++-.|.+++. .+++|+|||.+|.++|..+.. .| .+++++|++
T Consensus 103 ~~G~~~~L~~~~~~l~~---k~vlViGaGg~g~a~a~~L~~-----~G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPG---LRILLIGAGGASRGVLLPLLS-----LD-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCC---CEEEEECCcHHHHHHHHHHHH-----cC-------CEEEEEECC
Confidence 56778888877877777 999999999777777766654 34 268888874
No 70
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=88.26 E-value=3.8 Score=41.73 Aligned_cols=149 Identities=20% Similarity=0.225 Sum_probs=94.9
Q ss_pred HhCCCe-EEEeecCCCchHHHHHHHHh-hcCCccccCC---chhHHHHHHHHHHHHHHh---------C------CCCCC
Q 007456 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G------LSLTD 320 (603)
Q Consensus 261 ~~~P~~-~Iq~EDf~~~naf~iL~ryr-~~~~~FnDDi---QGTaaV~lAgll~A~r~t---------g------~~l~d 320 (603)
...|+. .|+.--.+..|- . ++..+ .-+.+.|--- +.+|=-+++.+|+..|-. | ..-.+
T Consensus 62 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~ 139 (307)
T 1wwk_A 62 ESAPKLKVIARAGVGLDNI-D-VEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIE 139 (307)
T ss_dssp TTCTTCCEEEESSSCCTTB-C-HHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCC
T ss_pred hhCCCCeEEEECCcccccc-C-HHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcc
Confidence 346887 888877777773 3 23333 3477777543 334445788899887731 1 01134
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCH
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 400 (603)
|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. ..+.... . ...+|
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~---------~~---~~~~~~g-~----~~~~l 190 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NILLYDPYP---------NE---ERAKEVN-G----KFVDL 190 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CH---HHHHHTT-C----EECCH
T ss_pred cCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCC---------Ch---hhHhhcC-c----cccCH
Confidence 5559999999999999999987653 43 688888741 11 0111100 0 12368
Q ss_pred HHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007456 401 LEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~----~~g~Ft~evv~~M~~~~~erPIIF~LSNP 446 (603)
.|+++. .|+++=.-- ..+.++++.++.|. +.-++.=.|.-
T Consensus 191 ~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk----~ga~lin~arg 234 (307)
T 1wwk_A 191 ETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK----KTAILINTSRG 234 (307)
T ss_dssp HHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC----TTCEEEECSCG
T ss_pred HHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC----CCeEEEECCCC
Confidence 899886 788874421 24789999999993 56788878773
No 71
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.15 E-value=1.4 Score=44.61 Aligned_cols=114 Identities=11% Similarity=0.126 Sum_probs=64.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhh-----ccccccCCcC-CcccC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA-----PFAKDPGDFM-GLREG 397 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~-----~fa~~~~~~~-~~~~~ 397 (603)
.||.|+|+|..|..+|..+...... .. ....+++++|++.-.. .+......++ .|- +...+. +....
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~-~~----~~~~~V~~~~r~~~~~-~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ 81 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQ-LA----QFDPRVTMWVFEEDIG-GKKLTEIINTQHENVKYL-PGHKLPPNVVAV 81 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH-CT----TEEEEEEEECCCCBSS-SSBHHHHHHHHSCCTTTS-TTCCCCTTEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCc-cc----CCCCeEEEEEcChhhh-hhHHHHHHHhcCcccccC-CcccCccCeEEE
Confidence 7999999999999999999876420 00 0003688888753211 0000111110 000 000000 00112
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
.++.|+++. .|++| ++. +....+++++.+.....+..+|..++|-.+
T Consensus 82 ~~~~~~~~~--aD~Vi-lav-~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 82 PDVVQAAED--ADILI-FVV-PHQFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SSHHHHHTT--CSEEE-ECC-CGGGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred cCHHHHHcC--CCEEE-EeC-CHHHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 578888876 78776 333 345778999988543345678889999543
No 72
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=88.14 E-value=18 Score=39.24 Aligned_cols=186 Identities=15% Similarity=0.148 Sum_probs=115.2
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CCeEEEeecCCCchH--HHHHHHHhh---cC--Ccccc----------CCchhHHHHHH
Q 007456 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWA--FETLERYRK---RF--CMFND----------DIQGTAGVALA 305 (603)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~~Iq~EDf~~~na--f~iL~ryr~---~~--~~FnD----------DiQGTaaV~lA 305 (603)
+..|-..|-..||..+.+.. |..-|-=+|++..-. --+.+.|++ .. -++-. .-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 34567777888888886655 888888999987622 124455553 11 22211 11235555555
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCC-Chhh---
Q 007456 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNL-DPAA--- 381 (603)
Q Consensus 306 gll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l-~~~k--- 381 (603)
++-.+++..|.+|+. .||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .| ++.+
T Consensus 216 ~~~~~~~~~G~~l~g---~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~-Gi~d~edi~~ 280 (449)
T 1bgv_A 216 YVEAVMKHENDTLVG---KTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE-GITTEEKINY 280 (449)
T ss_dssp HHHHHHHHTTCCSTT---CEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT-CSCSHHHHHH
T ss_pred HHHHHHHHccCCcCC---CEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC-cCCCHHHHHH
Confidence 677788888987877 9999999999999999888764 33 2344799999888753 34 2211
Q ss_pred -hcccccc-CCcCCc-----ccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007456 382 -APFAKDP-GDFMGL-----REGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (603)
Q Consensus 382 -~~fa~~~-~~~~~~-----~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt~ 448 (603)
..+.... ..|... ....+-.+. -.++.|+|+=+. .++..|++-++.+.+ |.-.||.-=+| |+.
T Consensus 281 l~~~k~~~~g~v~~y~~~~~a~~i~~~e~-~~~~~Dil~P~A-~~~~I~~~na~~l~a--~g~kiV~EgAN~p~T 351 (449)
T 1bgv_A 281 MLEMRASGRNKVQDYADKFGVQFFPGEKP-WGQKVDIIMPCA-TQNDVDLEQAKKIVA--NNVKYYIEVANMPTT 351 (449)
T ss_dssp HHHHHHHCCCCTHHHHHHHTCEEEETCCG-GGSCCSEEECCS-CTTCBCHHHHHHHHH--TTCCEEECCSSSCBC
T ss_pred HHHHHhccCCChhhcccccCCEEeCchhh-hcCCcceeeccc-cccccchhhHHHHHh--cCCeEEEeCCCCcCC
Confidence 0111000 001000 000000112 256889999777 479999999999953 34468888888 654
No 73
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.11 E-value=1.4 Score=42.65 Aligned_cols=122 Identities=14% Similarity=0.163 Sum_probs=69.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCC-ChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGN-NDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gl-s~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|+|..|..+|..+.+. |. .. .+++++|++ ++....+++... .....++.|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~~~----~~V~~~~r~----------~~~~~~~~~~~g----~~~~~~~~e 59 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIVSS----NQIICSDLN----------TANLKNASEKYG----LTTTTDNNE 59 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSSCG----GGEEEECSC----------HHHHHHHHHHHC----CEECSCHHH
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCCCC----CeEEEEeCC----------HHHHHHHHHHhC----CEEeCChHH
Confidence 5899999999999999888663 43 21 368888873 111112221100 012357889
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc-CCcEEEEcCCCCCceec
Q 007456 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA-GENIVFASGSPFENVDL 478 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt-~Grai~AtGSPf~pv~~ 478 (603)
+++. +|++| ++. +....+++++.+.....+..+|...++-.+. +..-++. .+..+ ...-|+.|+..
T Consensus 60 ~~~~--aDvVi-lav-~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~-----~~l~~~~~~~~~~-v~~~p~~p~~~ 126 (247)
T 3gt0_A 60 VAKN--ADILI-LSI-KPDLYASIINEIKEIIKNDAIIVTIAAGKSI-----ESTENAFNKKVKV-VRVMPNTPALV 126 (247)
T ss_dssp HHHH--CSEEE-ECS-CTTTHHHHC---CCSSCTTCEEEECSCCSCH-----HHHHHHHCSCCEE-EEEECCGGGGG
T ss_pred HHHh--CCEEE-EEe-CHHHHHHHHHHHHhhcCCCCEEEEecCCCCH-----HHHHHHhCCCCcE-EEEeCChHHHH
Confidence 9987 78877 343 4445678888775423456688877776653 2222332 23233 33357777765
No 74
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=88.02 E-value=5.9 Score=42.51 Aligned_cols=218 Identities=18% Similarity=0.179 Sum_probs=129.2
Q ss_pred hCCCe-EEEeecCCCchHHHHHHHHhh-cCCccccCC---chhHHHHHHHHHHHHHHh---------C---C---CCCCC
Q 007456 262 RWPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G---L---SLTDF 321 (603)
Q Consensus 262 ~~P~~-~Iq~EDf~~~naf~iL~ryr~-~~~~FnDDi---QGTaaV~lAgll~A~r~t---------g---~---~l~dl 321 (603)
..|+. .|+.-=.+..| .++ +..++ -+++||--- ..+|=-++|.+|+..|-. | + .-.+|
T Consensus 77 ~~p~Lk~I~~~~~G~d~-IDl-~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el 154 (416)
T 3k5p_A 77 AANRLIAVGCFSVGTNQ-VEL-KAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREV 154 (416)
T ss_dssp HCTTCCEEEECSSCCTT-BCH-HHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCS
T ss_pred hCCCcEEEEECccccCc-cCH-HHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccC
Confidence 35665 56555555544 233 44444 488998643 345666788888887631 1 0 01345
Q ss_pred CCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHH
Q 007456 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (603)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~ 401 (603)
.+.++.|+|.|..|..+|+.+... |+ +++.+|+..- .... -++ ...+|.
T Consensus 155 ~gktvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~yd~~~~-------~~~~---~~~---------~~~sl~ 203 (416)
T 3k5p_A 155 RGKTLGIVGYGNIGSQVGNLAESL-----GM-------TVRYYDTSDK-------LQYG---NVK---------PAASLD 203 (416)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECTTCC-------CCBT---TBE---------ECSSHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEECCcch-------hccc---CcE---------ecCCHH
Confidence 559999999999999999987654 54 6888887511 1100 011 135799
Q ss_pred HHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCC-CCce
Q 007456 402 EVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP-FENV 476 (603)
Q Consensus 402 e~V~~vkptvLIG~S~----~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSP-f~pv 476 (603)
|+++. .|+++=.-- ..+.|+++.++.|. +..++.=.|.=..--|---.+|++ +|+.- +.|.. |++-
T Consensus 204 ell~~--aDvV~lhvPlt~~T~~li~~~~l~~mk----~gailIN~aRG~vvd~~aL~~aL~--~g~i~-gAalDVf~~E 274 (416)
T 3k5p_A 204 ELLKT--SDVVSLHVPSSKSTSKLITEAKLRKMK----KGAFLINNARGSDVDLEALAKVLQ--EGHLA-GAAIDVFPVE 274 (416)
T ss_dssp HHHHH--CSEEEECCCC-----CCBCHHHHHHSC----TTEEEEECSCTTSBCHHHHHHHHH--TTSEE-EEEECCCSSC
T ss_pred HHHhh--CCEEEEeCCCCHHHhhhcCHHHHhhCC----CCcEEEECCCChhhhHHHHHHHHH--cCCcc-EEEeCCCCCC
Confidence 99988 798874321 23889999999993 678999888866533444445554 56643 33333 3221
Q ss_pred ecCCCee--eccccccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccC
Q 007456 477 DLGNGKI--GHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYM 526 (603)
Q Consensus 477 ~~~~G~~--~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v 526 (603)
....+.. ..--+..|+.+-|=+|-....+ -+.|...+++.|.+..
T Consensus 275 P~~~~~~~~~pL~~~~nvilTPHig~~T~ea-----~~~~~~~~~~nl~~~l 321 (416)
T 3k5p_A 275 PASNGERFSTPLQGLENVILTPHIGGSTEEA-----QERIGTEVTRKLVEYS 321 (416)
T ss_dssp CSSTTSCCCCTTTTCTTEEECCSCTTCCHHH-----HHHHHHHHHHHHHHHH
T ss_pred CCCcccccchhHhcCCCEEECCCCCCCCHHH-----HHHHHHHHHHHHHHHH
Confidence 1110100 1123567899999876432222 2456666777777665
No 75
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=87.99 E-value=0.17 Score=55.38 Aligned_cols=131 Identities=17% Similarity=0.184 Sum_probs=74.8
Q ss_pred ceEEEeCcchhHHH--HHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccc-cccCCcCCcccCCCH
Q 007456 324 QKIVVVGAGSAGLG--VLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA-KDPGDFMGLREGASL 400 (603)
Q Consensus 324 ~riv~~GAGsAg~G--iA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa-~~~~~~~~~~~~~~L 400 (603)
.||.|+|||+.|.| +|..|+.. .++ +-..++|+|.+-=..+ .+......+. +-..+. ......++
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~e~l~---~~~~~~~~~l~~~~~~~-~I~~ttD~ 71 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDEERLD---AILTIAKKYVEEVGADL-KFEKTMNL 71 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCHHHHH---HHHHHHHHHHHHTTCCC-EEEEESCH
T ss_pred CEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCHHHHH---HHHHHHHHHhccCCCCc-EEEEECCH
Confidence 79999999996544 46666531 122 1257999998531111 0111111111 000010 01123578
Q ss_pred HHHhcccCCcEEEeecCC---------------CCCCC-------------------------HHHHHHhhhcCCCCCeE
Q 007456 401 LEVVRKVKPHVLLGLSGV---------------GGVFN-------------------------EEVLKAMRESDSVKPAI 440 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~~---------------~g~Ft-------------------------~evv~~M~~~~~erPII 440 (603)
.++++. .|++|=+.+. .|.|. +++++.|.+ +|+.-+|
T Consensus 72 ~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~-~~P~A~i 148 (480)
T 1obb_A 72 DDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEK-LSPKAWY 148 (480)
T ss_dssp HHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHH-HCTTCEE
T ss_pred HHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHH-HCCCeEE
Confidence 899988 7888744421 13333 688899964 9999999
Q ss_pred EecCCCCCccCCCHHHHhcccCCcEEEEcCCC
Q 007456 441 FAMSNPTMNAECTAADAFKHAGENIVFASGSP 472 (603)
Q Consensus 441 F~LSNPt~~aE~tpeda~~wt~Grai~AtGSP 472 (603)
+-.|||.. +..+-+.++..-|+|=.+.+|
T Consensus 149 i~~TNPvd---i~t~~~~k~p~~rviG~c~~~ 177 (480)
T 1obb_A 149 LQAANPIF---EGTTLVTRTVPIKAVGFCHGH 177 (480)
T ss_dssp EECSSCHH---HHHHHHHHHSCSEEEEECSGG
T ss_pred EEeCCcHH---HHHHHHHHCCCCcEEecCCCH
Confidence 99999996 455555666555544333344
No 76
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=87.96 E-value=0.95 Score=45.17 Aligned_cols=100 Identities=19% Similarity=0.136 Sum_probs=58.2
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec--CCcccCCCCCCChhhhccccc--cCCcCCcccCC--
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DGLITKERKNLDPAAAPFAKD--PGDFMGLREGA-- 398 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~--~GLv~~~r~~l~~~k~~fa~~--~~~~~~~~~~~-- 398 (603)
||.|+|+|..|..+|..|.+. | .+++++|+ +.-- +...++...+. ...+.......
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~ 63 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEI------LKSISAGREHPRLGVKLNGVEIFWPE 63 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHH------HHHHHTTCCBTTTTBCCCSEEEECGG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHH------HHHHHHhCcCcccCccccceEEecHH
Confidence 799999999999999888664 4 26888887 3210 00000000000 00000000112
Q ss_pred CHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007456 399 SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (603)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt 447 (603)
++.|+++. .|++| ++. +....+++++.++. ..+..+|..++|-.
T Consensus 64 ~~~~~~~~--~D~vi-~~v-~~~~~~~v~~~i~~-l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 64 QLEKCLEN--AEVVL-LGV-STDGVLPVMSRILP-YLKDQYIVLISKGL 107 (335)
T ss_dssp GHHHHHTT--CSEEE-ECS-CGGGHHHHHHHHTT-TCCSCEEEECCCSE
T ss_pred hHHHHHhc--CCEEE-EcC-ChHHHHHHHHHHhc-CCCCCEEEEEcCcC
Confidence 67788776 68776 332 23367888888865 55567888888866
No 77
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=87.77 E-value=0.44 Score=47.43 Aligned_cols=49 Identities=27% Similarity=0.394 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 304 lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
-.|++.+++-.|..++. .+++|+|||.+|.++|..|.. .| .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~---~~vlvlGaGg~g~a~a~~L~~-----~G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPN---QHVLILGAGGATKGVLLPLLQ-----AQ-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTT---CEEEEECCSHHHHTTHHHHHH-----TT-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCC---CEEEEECCcHHHHHHHHHHHH-----CC-------CEEEEEECC
Confidence 46788888887777777 999999999888887777654 34 368888875
No 78
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=87.75 E-value=0.35 Score=42.94 Aligned_cols=91 Identities=12% Similarity=0.127 Sum_probs=51.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.+|+|+|+|..|..++..+.. .|. + ++++|++ .+..+.|++.... . .....++.++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----------~~~~~~~a~~~~~-~-~~~~~~~~~~ 77 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----------IDHVRAFAEKYEY-E-YVLINDIDSL 77 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----------HHHHHHHHHHHTC-E-EEECSCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----------HHHHHHHHHHhCC-c-eEeecCHHHH
Confidence 899999999999877765543 232 3 8888874 1111223321100 0 0123578888
Q ss_pred hcccCCcEEEeecCCC-CCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007456 404 VRKVKPHVLLGLSGVG-GVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (603)
Q Consensus 404 V~~vkptvLIG~S~~~-g~Ft~evv~~M~~~~~erPIIF~LSNPt 447 (603)
++. .|++|-+++.+ ..++.++ ..+.-+|+-+++|.
T Consensus 78 ~~~--~Divi~at~~~~~~~~~~~-------l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 78 IKN--NDVIITATSSKTPIVEERS-------LMPGKLFIDLGNPP 113 (144)
T ss_dssp HHT--CSEEEECSCCSSCSBCGGG-------CCTTCEEEECCSSC
T ss_pred hcC--CCEEEEeCCCCCcEeeHHH-------cCCCCEEEEccCCc
Confidence 876 79988766543 2333321 22455666777764
No 79
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=87.65 E-value=1.8 Score=46.71 Aligned_cols=181 Identities=13% Similarity=0.099 Sum_probs=112.9
Q ss_pred ChhhhhHhHHHHHHHHHHhC-CCeEEEeecCCCchHHH---HHHHHhhc-----CCccccC----------CchhHHHHH
Q 007456 244 EGEEYLSIVDEFMEAVHARW-PKAIVQFEDFQMKWAFE---TLERYRKR-----FCMFNDD----------IQGTAGVAL 304 (603)
Q Consensus 244 ~g~~Y~~~vdefv~av~~~~-P~~~Iq~EDf~~~naf~---iL~ryr~~-----~~~FnDD----------iQGTaaV~l 304 (603)
+.+|-..|...|+.++...- |+.-|-=+|++.. ... +.+.|+.. ..++--+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 44567788999999999877 8888888999873 222 34666431 1222222 122544455
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEecCCcccCCCC-CCChhhh
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFF-LLDKDGLITKERK-NLDPAAA 382 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~-lvD~~GLv~~~r~-~l~~~k~ 382 (603)
-++-.+++..|.+|+. .||+|.|.|..|...|++|.+. |. +++ +.|++|-+++... ++...+
T Consensus 195 ~~~~~~~~~~g~~l~g---k~vaVqG~GnVG~~aa~~L~e~-----Ga-------kVVavsD~~G~i~dp~GlD~~~l~- 258 (421)
T 1v9l_A 195 VATREMAKKLWGGIEG---KTVAIQGMGNVGRWTAYWLEKM-----GA-------KVIAVSDINGVAYRKEGLNVELIQ- 258 (421)
T ss_dssp HHHHHHHHHHHSCCTT---CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEEECSSCEEECTTCCCTHHHH-
T ss_pred HHHHHHHHhcCCCcCC---CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEECCCcEEECCCCCCHHHHH-
Confidence 5667778888888888 9999999999999999877553 43 455 9999999887542 222211
Q ss_pred ccccccCC--cCCcc-----cCC-CHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CCC
Q 007456 383 PFAKDPGD--FMGLR-----EGA-SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PTM 448 (603)
Q Consensus 383 ~fa~~~~~--~~~~~-----~~~-~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt~ 448 (603)
.+...... |.+-+ ... +-.| +-.++.|+|+=+. .++.+|++-++.+ .-.||.--+| |+.
T Consensus 259 ~~k~~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A-~~~~I~~~~a~~l-----~ak~V~EgAN~p~t 326 (421)
T 1v9l_A 259 KNKGLTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAA-IENVIRGDNAGLV-----KARLVVEGANGPTT 326 (421)
T ss_dssp HTTTSCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECS-CSSCBCTTTTTTC-----CCSEEECCSSSCBC
T ss_pred HHHHhhCCccccccccccCceEeCCchh-hhcCCccEEEecC-cCCccchhhHHHc-----CceEEEecCCCcCC
Confidence 11111000 00000 000 1122 3356789999766 4788888877776 3468888888 653
No 80
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.57 E-value=0.32 Score=49.42 Aligned_cols=124 Identities=20% Similarity=0.248 Sum_probs=67.1
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
||.|+|||+.|.++|..+.. .|+- ..++++|.+---.+. ..++.+.. +|..+. .. ...+ .++
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~~-----~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~-~i----~~~~-~~a 64 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGSC-----SELVLVDRDEDRAQAEAEDIAHAA-PVSHGT-RV----WHGG-HSE 64 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHTTSC-CTTSCC-EE----EEEC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCCHHHHHHHHHhhhhhh-hhcCCe-EE----EECC-HHH
Confidence 89999999999999976644 3542 379999985210000 00111100 111110 00 0123 356
Q ss_pred hcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEc
Q 007456 404 VRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFAS 469 (603)
Q Consensus 404 V~~vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~At 469 (603)
++. .|++|=+.+.+.. .-+++++.|.+ +++.-+|+-.|||.. ...+.+.+.+.-.-+|.+
T Consensus 65 ~~~--aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~~~vi~~tNP~~---~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 65 LAD--AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITR-AAPDAVLLVTSNPVD---LLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp GTT--CSEEEECC------------CHHHHHHHHHHHHHHHHH-HCSSSEEEECSSSHH---HHHHHHHHHSCSSCEEEC
T ss_pred hCC--CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHH-hCCCeEEEEecCchH---HHHHHHHHhCChhcEEeC
Confidence 766 6888754433321 12678888865 677778877999986 333344444444455666
Q ss_pred CC
Q 007456 470 GS 471 (603)
Q Consensus 470 GS 471 (603)
|.
T Consensus 139 gt 140 (304)
T 2v6b_A 139 GT 140 (304)
T ss_dssp TT
T ss_pred Cc
Confidence 53
No 81
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=87.56 E-value=1.5 Score=44.51 Aligned_cols=101 Identities=16% Similarity=0.128 Sum_probs=60.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.||.|+|+|..|..+|..|.+. |... ..+++++|+.- . . .....+.+..- ....+..|+
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~-----G~~~---~~~V~v~~r~~----~---~-~~~~~l~~~G~-----~~~~~~~e~ 81 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA-----GVLA---AHKIMASSPDM----D---L-ATVSALRKMGV-----KLTPHNKET 81 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT-----TSSC---GGGEEEECSCT----T---S-HHHHHHHHHTC-----EEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CCCC---cceEEEECCCc----c---H-HHHHHHHHcCC-----EEeCChHHH
Confidence 6899999999999999888653 4210 13588887641 0 0 01111111110 112467788
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007456 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (603)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~ 449 (603)
++. .|++| ++. +....+++++.+.....+..+|.-+||..+.
T Consensus 82 ~~~--aDvVi-lav-~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~ 123 (322)
T 2izz_A 82 VQH--SDVLF-LAV-KPHIIPFILDEIGADIEDRHIVVSCAAGVTI 123 (322)
T ss_dssp HHH--CSEEE-ECS-CGGGHHHHHHHHGGGCCTTCEEEECCTTCCH
T ss_pred hcc--CCEEE-EEe-CHHHHHHHHHHHHhhcCCCCEEEEeCCCCCH
Confidence 876 67766 333 2346677888775433455688888888763
No 82
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.49 E-value=0.64 Score=46.24 Aligned_cols=82 Identities=26% Similarity=0.372 Sum_probs=53.3
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcc
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~f 384 (603)
.|++.+++-.|..++. .+++|+|+|.+|..+|..+.+. |. +|+++|+.- +.-+.+
T Consensus 114 ~G~~~~l~~~~~~~~~---~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~~----------~~~~~l 168 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKE---KSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRTK----------EKAIKL 168 (275)
T ss_dssp HHHHHHHHHHCTTGGG---SEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSH----------HHHHHH
T ss_pred HHHHHHHHHhCCCcCC---CEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECCH----------HHHHHH
Confidence 4788888877877777 9999999999999988887653 42 588888741 111122
Q ss_pred ccccCCcCCcccCCCHHHHhcccCCcEEEeecC
Q 007456 385 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 417 (603)
Q Consensus 385 a~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~ 417 (603)
++... . ....++.++++. +|++|-+..
T Consensus 169 ~~~~g-~---~~~~~~~~~~~~--aDiVi~atp 195 (275)
T 2hk9_A 169 AQKFP-L---EVVNSPEEVIDK--VQVIVNTTS 195 (275)
T ss_dssp TTTSC-E---EECSCGGGTGGG--CSEEEECSS
T ss_pred HHHcC-C---eeehhHHhhhcC--CCEEEEeCC
Confidence 22100 0 011256677765 799996664
No 83
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=87.11 E-value=0.33 Score=43.25 Aligned_cols=32 Identities=34% Similarity=0.605 Sum_probs=25.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
-.|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 359999999999999988866 465 48888864
No 84
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=86.94 E-value=1.7 Score=45.31 Aligned_cols=118 Identities=14% Similarity=0.167 Sum_probs=67.5
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcc
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~f 384 (603)
+|.+++..+.. ... .++.|+|+|..|..++..+... .+. ++|+++|+. . +........|
T Consensus 116 ~s~laa~~la~--~~~---~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~--~~a~~la~~~ 174 (350)
T 1x7d_A 116 TSLMAAQALAR--PNA---RKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----P--LATAKLIANL 174 (350)
T ss_dssp HHHHHHHHHSC--TTC---CEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----H--HHHHHHHHHH
T ss_pred HHHHHHHHhcc--ccC---CeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----H--HHHHHHHHHH
Confidence 34555555532 345 8999999999999888776542 233 578888873 1 1112222222
Q ss_pred ccccCCcCCcccCCCHHHHhcccCCcEEEeecCCC---CCCCHHHHHHhhhcCCCCCeEEecCC--CCCccCCCHH
Q 007456 385 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG---GVFNEEVLKAMRESDSVKPAIFAMSN--PTMNAECTAA 455 (603)
Q Consensus 385 a~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~---g~Ft~evv~~M~~~~~erPIIF~LSN--Pt~~aE~tpe 455 (603)
... .... .....++.|+++. .|++|=++..+ ..|+.++ ..+.-.|+.++. |. +.|+.++
T Consensus 175 ~~~-~g~~-~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~-------l~~G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 175 KEY-SGLT-IRRASSVAEAVKG--VDIITTVTADKAYATIITPDM-------LEPGMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp TTC-TTCE-EEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGG-------CCTTCEEEECSCCBTT-BEEECHH
T ss_pred Hhc-cCce-EEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHH-------cCCCCEEEECCCCCCC-ceeeCHH
Confidence 110 0000 0124689999987 79998665432 1243322 224458888876 66 5688764
No 85
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=86.87 E-value=0.72 Score=46.52 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=60.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||+.|..+|..|... |+. ..++++|++---.+. ..++.+. ..+... ... ....++ +
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~~-----~~V~l~d~~~~~~~~~~~~l~~~-~~~~~~--~~~--~~~~d~-~ 65 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GVA-----DDYVFIDANEAKVKADQIDFQDA-MANLEA--HGN--IVINDW-A 65 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHHH-GGGSSS--CCE--EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEcCCHHHHHHHHHHHHhh-hhhcCC--CeE--EEeCCH-H
Confidence 4899999999999998888653 541 479999985100000 0001100 011110 000 002356 6
Q ss_pred HhcccCCcEEEeecCC-------CCCC-----------CHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007456 403 VVRKVKPHVLLGLSGV-------GGVF-----------NEEVLKAMRESDSVKPAIFAMSNPTMN 449 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~-------~g~F-----------t~evv~~M~~~~~erPIIF~LSNPt~~ 449 (603)
+++. .|++|=+... +|-. -+++++.|.+ +++..+|+-+|||...
T Consensus 66 ~~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~-~~~~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 66 ALAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKE-SGFHGVLVVISNPVDV 127 (309)
T ss_dssp GGTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHHH
T ss_pred HhCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEEcCcHHH
Confidence 7766 7887744332 2211 1588888854 6777788889999863
No 86
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=86.73 E-value=0.43 Score=47.73 Aligned_cols=32 Identities=28% Similarity=0.652 Sum_probs=26.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5799999999999999988653 43 68888874
No 87
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=86.51 E-value=1.4 Score=48.00 Aligned_cols=101 Identities=12% Similarity=0.188 Sum_probs=59.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcccc-ccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~-~~~~~~~~~~~~~L~e 402 (603)
.+|.|+|+|..|.++|..|.+. |. +++++|+.- +....+.. .... .+.....++.|
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~----------~~~~~l~~~~~~~-~gi~~~~s~~e 67 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ----------SKVDHFLANEAKG-KSIIGATSIED 67 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS----------HHHHHHHHTTTTT-SSEECCSSHHH
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----------HHHHHHHcccccC-CCeEEeCCHHH
Confidence 5899999999999999988763 54 578887641 11111111 0000 00112356778
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 403 ~V~~v-kptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
+++.. +||++| ++-.++...+++++.+.....+..||.-+||-.+
T Consensus 68 ~v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~ 113 (497)
T 2p4q_A 68 FISKLKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHF 113 (497)
T ss_dssp HHHTSCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HHhcCCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCCh
Confidence 77653 367766 4433445667777777543344567777887543
No 88
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.48 E-value=1.1 Score=46.60 Aligned_cols=100 Identities=21% Similarity=0.340 Sum_probs=59.0
Q ss_pred CCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCC
Q 007456 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (603)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 399 (603)
++...+++|+|+|..|..+|+.+... |. +++++|++- . .+...+..+.... ... .....+
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~-----Ga-------~V~~~d~~~----~--~~~~~~~~~g~~~-~~~-~~~~~~ 222 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGM-----GA-------QVTILDVNH----K--RLQYLDDVFGGRV-ITL-TATEAN 222 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----H--HHHHHHHHTTTSE-EEE-ECCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCH----H--HHHHHHHhcCceE-EEe-cCCHHH
Confidence 35559999999999999988877543 43 688888741 0 1111111111100 000 001235
Q ss_pred HHHHhcccCCcEEEeecCCCC-----CCCHHHHHHhhhcCCCCCeEEecCC
Q 007456 400 LLEVVRKVKPHVLLGLSGVGG-----VFNEEVLKAMRESDSVKPAIFAMSN 445 (603)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g-----~Ft~evv~~M~~~~~erPIIF~LSN 445 (603)
+.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.
T Consensus 223 l~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk----~gg~iV~v~~ 267 (369)
T 2eez_A 223 IKKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK----EGAVIVDVAV 267 (369)
T ss_dssp HHHHHHH--CSEEEECCC-------CCSCHHHHTTSC----TTCEEEECC-
T ss_pred HHHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc----CCCEEEEEec
Confidence 7888876 799998876543 47899999993 3456666664
No 89
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=86.48 E-value=0.19 Score=54.32 Aligned_cols=130 Identities=12% Similarity=0.136 Sum_probs=75.8
Q ss_pred ceEEEeCcchh-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC--cccCCCCCCChhhhcccc-ccCCcCCcccCCC
Q 007456 324 QKIVVVGAGSA-GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG--LITKERKNLDPAAAPFAK-DPGDFMGLREGAS 399 (603)
Q Consensus 324 ~riv~~GAGsA-g~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G--Lv~~~r~~l~~~k~~fa~-~~~~~~~~~~~~~ 399 (603)
.||.|+|||+. |.+++..|+.. ..++.- ..|+|+|.+- =..+ .+.+....+.. -..+.. .....+
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~~----~ev~L~Di~~~~e~~~---~~~~~~~~~~~~~~~~~~-i~~t~D 76 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELPV----GELWLVDIPEGKEKLE---IVGALAKRMVEKAGVPIE-IHLTLD 76 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCCE----EEEEEECCGGGHHHHH---HHHHHHHHHHHHTTCCCE-EEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCCC----CEEEEEEcCCChHHHH---HHHHHHHHHHhhcCCCcE-EEEeCC
Confidence 69999999997 55545544431 144421 5799999853 1110 01111112211 000100 112357
Q ss_pred HHHHhcccCCcEEEeecCCCCC----------------------------------CCHHHHHHhhhcCCCCCeEEecCC
Q 007456 400 LLEVVRKVKPHVLLGLSGVGGV----------------------------------FNEEVLKAMRESDSVKPAIFAMSN 445 (603)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~M~~~~~erPIIF~LSN 445 (603)
+.|+++. .|++|=..+.++. .=+++++.|.+ +|+.-+|+-.||
T Consensus 77 ~~eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~-~~P~a~ii~~tN 153 (450)
T 1s6y_A 77 RRRALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEE-LCPDAWLINFTN 153 (450)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSS
T ss_pred HHHHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHH-HCCCeEEEEeCC
Confidence 9999998 7988855443321 13588888854 999999999999
Q ss_pred CCCccCCCHHHHhcccCCcEEEEcC
Q 007456 446 PTMNAECTAADAFKHAGENIVFASG 470 (603)
Q Consensus 446 Pt~~aE~tpeda~~wt~Grai~AtG 470 (603)
|.. +..+-+++.+.-.-+|.+|
T Consensus 154 Pvd---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 154 PAG---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp SHH---HHHHHHHHHCCCCCEEECC
T ss_pred cHH---HHHHHHHHhCCCCCEEEeC
Confidence 996 4555566666442566654
No 90
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=86.44 E-value=3.5 Score=39.65 Aligned_cols=92 Identities=12% Similarity=0.089 Sum_probs=59.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.||.|+|+|..|..+|..+... |.. ...+++++|++- .+ + .- ....++.|+
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~~----~~---------~---g~-----~~~~~~~~~ 55 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPSK----KN---------T---TL-----NYMSSNEEL 55 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSSC----CS---------S---SS-----EECSCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCCc----cc---------C---ce-----EEeCCHHHH
Confidence 6899999999999999988664 320 002688888741 11 0 00 012467788
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007456 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (603)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~ 449 (603)
++. +|++| ++. +....+++++.+.. +.+..+|+.++|..+.
T Consensus 56 ~~~--~D~vi-~~v-~~~~~~~v~~~l~~-~l~~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 56 ARH--CDIIV-CAV-KPDIAGSVLNNIKP-YLSSKLLISICGGLNI 96 (262)
T ss_dssp HHH--CSEEE-ECS-CTTTHHHHHHHSGG-GCTTCEEEECCSSCCH
T ss_pred Hhc--CCEEE-EEe-CHHHHHHHHHHHHH-hcCCCEEEEECCCCCH
Confidence 876 78776 333 33467888888854 3356678888888764
No 91
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=86.43 E-value=6.2 Score=41.23 Aligned_cols=171 Identities=16% Similarity=0.195 Sum_probs=103.0
Q ss_pred HhCCCe-EEEeecCCCchH-HHHHHHHhhcCCccccCC---chhHHHHHHHHHHHHHH--------------------hC
Q 007456 261 ARWPKA-IVQFEDFQMKWA-FETLERYRKRFCMFNDDI---QGTAGVALAGLLGTVRA--------------------QG 315 (603)
Q Consensus 261 ~~~P~~-~Iq~EDf~~~na-f~iL~ryr~~~~~FnDDi---QGTaaV~lAgll~A~r~--------------------tg 315 (603)
...|+. .|+.-..+..|- ...+.+.+.-+.+.|--- +.+|=-+++.+|+..|- .+
T Consensus 80 ~~~~~Lk~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~ 159 (364)
T 2j6i_A 80 DKAKKLKLVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDA 159 (364)
T ss_dssp HHCTTCCEEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTC
T ss_pred hhCCCCeEEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCc
Confidence 346887 888888888774 222222221466666422 34555578888888772 23
Q ss_pred CCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcc
Q 007456 316 LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLR 395 (603)
Q Consensus 316 ~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~ 395 (603)
.. |.+.+|.|+|.|..|..+|+.+... |+ ++++.+|+... .....+..-++
T Consensus 160 ~~---l~g~tvgIIG~G~IG~~vA~~l~~~-----G~------~~V~~~d~~~~------~~~~~~~~g~~--------- 210 (364)
T 2j6i_A 160 YD---IEGKTIATIGAGRIGYRVLERLVPF-----NP------KELLYYDYQAL------PKDAEEKVGAR--------- 210 (364)
T ss_dssp CC---STTCEEEEECCSHHHHHHHHHHGGG-----CC------SEEEEECSSCC------CHHHHHHTTEE---------
T ss_pred cc---CCCCEEEEECcCHHHHHHHHHHHhC-----CC------cEEEEECCCcc------chhHHHhcCcE---------
Confidence 34 4459999999999999999987543 54 23888886421 01111100011
Q ss_pred cCCCHHHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007456 396 EGASLLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 468 (603)
Q Consensus 396 ~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~A 468 (603)
...+|.|+++. .|+++=+-- ..+.++++.++.|. +..+|.-.|+-..--|---.+|++ +|+.--|
T Consensus 211 ~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~ga~lIn~arG~~vd~~aL~~aL~--~g~i~gA 279 (364)
T 2j6i_A 211 RVENIEELVAQ--ADIVTVNAPLHAGTKGLINKELLSKFK----KGAWLVNTARGAICVAEDVAAALE--SGQLRGY 279 (364)
T ss_dssp ECSSHHHHHHT--CSEEEECCCCSTTTTTCBCHHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE
T ss_pred ecCCHHHHHhc--CCEEEECCCCChHHHHHhCHHHHhhCC----CCCEEEECCCCchhCHHHHHHHHH--cCCCcEE
Confidence 12479999886 798874422 12789999999983 567888888744422333334443 4554433
No 92
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=86.41 E-value=0.18 Score=54.91 Aligned_cols=130 Identities=20% Similarity=0.209 Sum_probs=75.2
Q ss_pred ceEEEeCcchh-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccc-cccCCcCCcccCCCHH
Q 007456 324 QKIVVVGAGSA-GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA-KDPGDFMGLREGASLL 401 (603)
Q Consensus 324 ~riv~~GAGsA-g~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa-~~~~~~~~~~~~~~L~ 401 (603)
.||.|+|||+. +.++|..|+.. ..++. -..++|+|.+-=..+ .+.+....+. .-..+.. .....++.
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~e~~~---~~~~~~~~~l~~~~~~~~-I~~t~D~~ 97 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDKERQD---RIAGACDVFIREKAPDIE-FAATTDPE 97 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCHHHHH---HHHHHHHHHHHHHCTTSE-EEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCHHHHH---HHHHHHHHHhccCCCCCE-EEEECCHH
Confidence 79999999996 44456555441 12442 147999998531111 1111111221 1000100 11235799
Q ss_pred HHhcccCCcEEEeecCCCC---------------C-------------------CCHHHHHHhhhcCCCCCeEEecCCCC
Q 007456 402 EVVRKVKPHVLLGLSGVGG---------------V-------------------FNEEVLKAMRESDSVKPAIFAMSNPT 447 (603)
Q Consensus 402 e~V~~vkptvLIG~S~~~g---------------~-------------------Ft~evv~~M~~~~~erPIIF~LSNPt 447 (603)
|+++. .|++|=+.+.++ . .=+++++.|.+ +|+.-+|+-.|||.
T Consensus 98 eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~-~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 98 EAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEK-YSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSCH
T ss_pred HHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHH-HCCCeEEEEeCCcH
Confidence 99988 798885443321 1 13588888964 99999999999999
Q ss_pred CccCCCHHHHhcccCCcEEEEcC
Q 007456 448 MNAECTAADAFKHAGENIVFASG 470 (603)
Q Consensus 448 ~~aE~tpeda~~wt~Grai~AtG 470 (603)
. +..+-+++.+.-.-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 6 4555565655443555554
No 93
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.32 E-value=0.85 Score=45.30 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=26.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999988763 43 58888874
No 94
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=86.30 E-value=1.3 Score=46.69 Aligned_cols=159 Identities=14% Similarity=0.156 Sum_probs=94.8
Q ss_pred hHhHHHHHHHHHHhCCCeEEEeecCCCchHHHHHHHHhhcC-CccccCC---------chhHHHHHHHHHHHHHH-hCC-
Q 007456 249 LSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKRF-CMFNDDI---------QGTAGVALAGLLGTVRA-QGL- 316 (603)
Q Consensus 249 ~~~vdefv~av~~~~P~~~Iq~EDf~~~naf~iL~ryr~~~-~~FnDDi---------QGTaaV~lAgll~A~r~-tg~- 316 (603)
++++..|.+++..+... -|-=+|++..- +.+...-+++ ++----+ .-||-=+.-++..+++. .|.
T Consensus 93 ~~~~r~~~~~~~~l~g~-~i~A~D~Gt~~--~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~~ 169 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR-YITAEDVGTTV--DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSD 169 (364)
T ss_dssp HHHHHHHHHHHHTTTTS-EEBCBCTTCCH--HHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHhcCc-eEEcccCCCCH--HHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhcccc
Confidence 45677777777777633 56678887543 3555555555 2211111 12443344455555555 365
Q ss_pred CCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCccc
Q 007456 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (603)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~ 396 (603)
+|+. .+|+|.|+|..|..+|+.+.+. |. ++++.|++ .+.+..+...| ...
T Consensus 170 ~L~G---ktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~~~l~~~a~~~---ga~------ 219 (364)
T 1leh_A 170 SLEG---LAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------KAAVSAAVAEE---GAD------ 219 (364)
T ss_dssp CCTT---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------HHHHHHHHHHH---CCE------
T ss_pred CCCc---CEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------HHHHHHHHHHc---CCE------
Confidence 6777 9999999999999999988664 43 57788853 11122222222 111
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC-CC
Q 007456 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN-PT 447 (603)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN-Pt 447 (603)
..++.+.. ..+.|++|=+. ..+.++++.++.| .-.+|.--+| |+
T Consensus 220 ~v~~~~ll-~~~~DIvip~a-~~~~I~~~~~~~l-----g~~iV~e~An~p~ 264 (364)
T 1leh_A 220 AVAPNAIY-GVTCDIFAPCA-LGAVLNDFTIPQL-----KAKVIAGSADNQL 264 (364)
T ss_dssp ECCGGGTT-TCCCSEEEECS-CSCCBSTTHHHHC-----CCSEECCSCSCCB
T ss_pred EEChHHHh-ccCCcEeeccc-hHHHhCHHHHHhC-----CCcEEEeCCCCCc
Confidence 11222322 25689999654 5789999988888 2457776777 54
No 95
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=86.22 E-value=0.33 Score=49.25 Aligned_cols=107 Identities=13% Similarity=0.191 Sum_probs=62.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||+.|.++|..+... |+. +++++|.+-=..+. ..++.+. ..+......+ ....++ +
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~~------~V~l~D~~~~~~~~~~~~l~~~-~~~~~~~~~i---~~t~d~-~ 68 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NLA------DVVLFDIAEGIPQGKALDITHS-MVMFGSTSKV---IGTDDY-A 68 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC------EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCc------eEEEEeCCchHHHHHHHHHHhh-hhhcCCCcEE---EECCCH-H
Confidence 6899999999999999988664 442 49999985200000 0001111 0111001010 112456 6
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007456 403 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~~erPIIF~LSNPt~~ 449 (603)
+++. .|++|=+-+.|.. +.+++++.+.+ +++.-||+-.|||...
T Consensus 69 a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~-~~~~~iii~~sNp~~~ 126 (317)
T 2ewd_A 69 DISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKK-YCPNAFVICITNPLDV 126 (317)
T ss_dssp GGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEeCChHHH
Confidence 7776 7887754433321 24677777754 6788899999999763
No 96
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=86.04 E-value=0.32 Score=51.00 Aligned_cols=36 Identities=25% Similarity=0.455 Sum_probs=31.1
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
|.+.||+|+|||..|..+|..|+.+ |+ ++|.++|.+
T Consensus 32 L~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D 67 (340)
T 3rui_A 32 IKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 67 (340)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCC
Confidence 3349999999999999999999886 44 689999997
No 97
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=85.66 E-value=1.3 Score=47.65 Aligned_cols=101 Identities=15% Similarity=0.172 Sum_probs=60.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.||.|+|+|..|..+|..|.+. |. +++++|+.- +.+...+..+. .. +.....++.|+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~~------~~~~~l~~~~~--~~---gi~~~~s~~e~ 62 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRTT------SKTEEVFKEHQ--DK---NLVFTKTLEEF 62 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH------HHHHHHHHHTT--TS---CEEECSSHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCCH------HHHHHHHHhCc--CC---CeEEeCCHHHH
Confidence 6899999999999999888653 53 477777631 01111111110 00 01123578888
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
++.. ++|++| ++..++...+++++.+.....+..||.-+||-.+
T Consensus 63 v~~l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~ 107 (474)
T 2iz1_A 63 VGSLEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTHF 107 (474)
T ss_dssp HHTBCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HhhccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCCH
Confidence 8753 478777 4444455667787776543344567888888653
No 98
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.27 E-value=0.33 Score=49.91 Aligned_cols=129 Identities=16% Similarity=0.204 Sum_probs=72.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||+.|.++|.++... |+- .++|+|.+-=..+. ..++.+...+.... ..+ ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~~------~v~L~Di~~~~l~~~~~~l~~~~~~~~~~-~~i---~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NLG------DVVLFDIVKNMPHGKALDTSHTNVMAYSN-CKV---SGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TCC------EEEEECSSSSHHHHHHHHHHTHHHHHTCC-CCE---EEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEeCCHHHHHHHHHHHHhhhhhcCCC-cEE---EECCCH-H
Confidence 5899999999999998887653 541 39999975100000 00111111111111 001 112456 7
Q ss_pred HhcccCCcEEEeecCCC---CC----------------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc--
Q 007456 403 VVRKVKPHVLLGLSGVG---GV----------------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA-- 461 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~----------------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt-- 461 (603)
+++. .|++|=+.+.| |. .-+++.+.|.+ +++.-+|+=.|||.... .+-+.+.+
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNP~~~~---t~~~~~~~g~ 142 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKK-NCPNAFIIVVTNPVDVM---VQLLHQHSGV 142 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECSSSHHHH---HHHHHHHHCC
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEecCChHHH---HHHHHHhcCC
Confidence 8877 68887554322 31 35677777754 77888877679998742 33444433
Q ss_pred CCcEEEEcCCCCC
Q 007456 462 GENIVFASGSPFE 474 (603)
Q Consensus 462 ~Grai~AtGSPf~ 474 (603)
.-.-+|.+|+..+
T Consensus 143 ~~~rviG~gt~ld 155 (322)
T 1t2d_A 143 PKNKIIGLGGVLD 155 (322)
T ss_dssp CGGGEEECCHHHH
T ss_pred ChHHEEeccCccc
Confidence 2334566654443
No 99
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=85.25 E-value=1.3 Score=47.81 Aligned_cols=101 Identities=17% Similarity=0.221 Sum_probs=60.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcccc-ccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~-~~~~~~~~~~~~~L~e 402 (603)
.||.|+|+|..|..+|..|.+. |. +++++|+..= .+. .+.+ .... .+.....++.|
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~~------~~~----~l~~~~~~g-~gi~~~~~~~e 59 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTVS------KVD----DFLANEAKG-TKVLGAHSLEE 59 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSTH------HHH----HHHHTTTTT-SSCEECSSHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCHH------HHH----HHHhccccC-CCeEEeCCHHH
Confidence 5899999999999999888653 53 4788876411 111 1111 0000 00112357888
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 403 ~V~~v-kptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
+++.+ ++|++| ++..++...+++++.+.....+.-||+-+||-.+
T Consensus 60 ~v~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~ 105 (482)
T 2pgd_A 60 MVSKLKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEY 105 (482)
T ss_dssp HHHHBCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCH
T ss_pred HHhhccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 88632 478777 4444454567777776543344568888888654
No 100
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=84.97 E-value=2.2 Score=46.28 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=64.2
Q ss_pred ceEEEeCcchh--HHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC-cccCCCCCCChhhhccccccCCcCCcccCCCH
Q 007456 324 QKIVVVGAGSA--GLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG-LITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (603)
Q Consensus 324 ~riv~~GAGsA--g~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G-Lv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 400 (603)
.||.|+||||. |.|++..|+.. ..+ . ..|+|+|.+- -+. .+....+.+.+ .++. .....++
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~e~le----~~~~~~~~l~~--~~~~-I~~TtD~ 69 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDFEAAQ----KNEVIGNHSGN--GRWR-YEAVSTL 69 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSHHHHH----HHHHHHTTSTT--SCEE-EEEESSH
T ss_pred CEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCHHHHH----HHHHHHHHHhc--cCCe-EEEECCH
Confidence 89999999995 68998888752 222 1 3799999752 100 00000001111 1110 1124689
Q ss_pred HHHhcccCCcEEEeecCCC---------------CC---------------------CCHHHHHHhhhcCCCCCeEEecC
Q 007456 401 LEVVRKVKPHVLLGLSGVG---------------GV---------------------FNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---------------g~---------------------Ft~evv~~M~~~~~erPIIF~LS 444 (603)
.||++. .|++|=.-.++ |. .-.++++.|. ++++.-+++-.|
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~-~~~p~a~~i~~t 146 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIR-DYAPESWVINYT 146 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHH-HHCTTSEEEECC
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHH-HHCCCeEEEEec
Confidence 999998 68887332111 22 1356777775 489999999999
Q ss_pred CCCC
Q 007456 445 NPTM 448 (603)
Q Consensus 445 NPt~ 448 (603)
||..
T Consensus 147 NPvd 150 (450)
T 3fef_A 147 NPMS 150 (450)
T ss_dssp SSHH
T ss_pred CchH
Confidence 9996
No 101
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=84.70 E-value=0.34 Score=49.86 Aligned_cols=129 Identities=14% Similarity=0.176 Sum_probs=72.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||+.|.++|..+.. .|+- +++++|.+-=..+. ..++.+...++... ..+ ....++ +
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~~------~V~L~Di~~~~l~~~~~~l~~~~~~~~~~-~~i---~~t~d~-~ 78 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDLG------DVYMFDIIEGVPQGKALDLNHCMALIGSP-AKI---FGENNY-E 78 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSTTHHHHHHHHHHHHHHHHTCC-CCE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEECCHHHHHHHHHHHHhHhhccCCC-CEE---EECCCH-H
Confidence 589999999999999877655 3541 39999985210000 00121111111111 111 112456 7
Q ss_pred HhcccCCcEEEeecC---CCCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc--CCcEE
Q 007456 403 VVRKVKPHVLLGLSG---VGGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GENIV 466 (603)
Q Consensus 403 ~V~~vkptvLIG~S~---~~g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt--~Grai 466 (603)
+++. .|++|=+-+ .+|. .-+++.+.+.+ +++.-+|+=.|||... ..+-+.+.+ .-.-+
T Consensus 79 al~~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNP~~~---~t~~~~~~~~~~~~rv 152 (328)
T 2hjr_A 79 YLQN--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGK-YCPNAFVICITNPLDA---MVYYFKEKSGIPANKV 152 (328)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHHH---HHHHHHHHHCCCGGGE
T ss_pred HHCC--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHH-HCCCeEEEEecCchHH---HHHHHHHhcCCChhhE
Confidence 7877 688774432 2332 24567777754 6777777667999873 234443333 23446
Q ss_pred EEcCCCCC
Q 007456 467 FASGSPFE 474 (603)
Q Consensus 467 ~AtGSPf~ 474 (603)
|++|++.+
T Consensus 153 iG~~t~Ld 160 (328)
T 2hjr_A 153 CGMSGVLD 160 (328)
T ss_dssp EESCHHHH
T ss_pred EEeCcHHH
Confidence 67776665
No 102
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=84.70 E-value=12 Score=39.76 Aligned_cols=217 Identities=18% Similarity=0.186 Sum_probs=121.1
Q ss_pred hCCCe-EEEeecCCCchHHHHHHHHhh-cCCccccCC---chhHHHHHHHHHHHHHHh---------C---C---CCCCC
Q 007456 262 RWPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G---L---SLTDF 321 (603)
Q Consensus 262 ~~P~~-~Iq~EDf~~~naf~iL~ryr~-~~~~FnDDi---QGTaaV~lAgll~A~r~t---------g---~---~l~dl 321 (603)
..|+. .|+.-=.+..|- . ++..++ -+++||--- +.+|=-++|.+|+..|-. | + .-.+|
T Consensus 66 ~~~~Lk~I~~~~~G~d~i-D-~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el 143 (404)
T 1sc6_A 66 AAEKLVAIGAFAIGTNQV-D-LDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEA 143 (404)
T ss_dssp HCSSCCEEEECSSCCTTB-C-HHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCS
T ss_pred hCCCCcEEEECCcccCcc-C-HHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCcccc
Confidence 35665 666555555552 2 233333 488888654 345555789999888731 1 0 11245
Q ss_pred CCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHH
Q 007456 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (603)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~ 401 (603)
.+.++.|+|-|..|..+|+.+... |+ +++.+|+..- ..+. -+ ....+|.
T Consensus 144 ~gktlGiIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~~-----~~~~-----~~---------~~~~~l~ 192 (404)
T 1sc6_A 144 RGKKLGIIGYGHIGTQLGILAESL-----GM-------YVYFYDIENK-----LPLG-----NA---------TQVQHLS 192 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSCC-----CCCT-----TC---------EECSCHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEEcCCch-----hccC-----Cc---------eecCCHH
Confidence 559999999999999999987653 54 6888887421 0000 00 0124799
Q ss_pred HHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE-----cCCC
Q 007456 402 EVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA-----SGSP 472 (603)
Q Consensus 402 e~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~A-----tGSP 472 (603)
|+++. .|+++=.- ...+.|+++.++.|. +.-++.=.|.=..--|.--.+|++ +|+.--| ..-|
T Consensus 193 ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~ga~lIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDVf~~EP 264 (404)
T 1sc6_A 193 DLLNM--SDVVSLHVPENPSTKNMMGAKEISLMK----PGSLLINASRGTVVDIPALADALA--SKHLAGAAIDVFPTEP 264 (404)
T ss_dssp HHHHH--CSEEEECCCSSTTTTTCBCHHHHHHSC----TTEEEEECSCSSSBCHHHHHHHHH--TTSEEEEEEEC-----
T ss_pred HHHhc--CCEEEEccCCChHHHHHhhHHHHhhcC----CCeEEEECCCChHHhHHHHHHHHH--cCCccEEEEeecCCCC
Confidence 99987 68877431 123789999999993 567888888644322222234443 5554211 1112
Q ss_pred CCceecCCCeeeccccccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCC
Q 007456 473 FENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMT 527 (603)
Q Consensus 473 f~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~ 527 (603)
.++-.. -...--+..|+.+-|=+|-...-+ -+.|...+++.|.+...
T Consensus 265 ~~~~~~---~~~pL~~~~nvilTPHi~~~T~ea-----~~~~~~~~~~nl~~~l~ 311 (404)
T 1sc6_A 265 ATNSDP---FTSPLAEFDNVLLTPHIGGSTQEA-----QENIGLEVAGKLIKYSD 311 (404)
T ss_dssp ----CT---TTGGGTTCTTEEEECCCSCCSHHH-----HHHHHHHHHHHHHHHHH
T ss_pred CCcccc---ccchhhcCCCEEECCCCCCCcHHH-----HHHHHHHHHHHHHHHHc
Confidence 110000 000112356889999776322222 23455566666665543
No 103
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=84.55 E-value=4.4 Score=41.87 Aligned_cols=122 Identities=18% Similarity=0.254 Sum_probs=76.3
Q ss_pred CCccccCC---chhHHHHHHHHHHHHHHh---------C----CC---CCCCCCceEEEeCcchhHHHHHHHHHHHHHHh
Q 007456 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------G----LS---LTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (603)
Q Consensus 289 ~~~FnDDi---QGTaaV~lAgll~A~r~t---------g----~~---l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~ 349 (603)
+.+.|--- +.+|=-+++-+|+..|-. | .. -.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 111 I~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~---- 186 (333)
T 3ba1_A 111 VRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEAF---- 186 (333)
T ss_dssp CEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHTT----
T ss_pred cEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHHC----
Confidence 55555432 234445677777776531 0 00 1245559999999999999999987643
Q ss_pred cCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHH
Q 007456 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEE 425 (603)
Q Consensus 350 ~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~e 425 (603)
|+ +++.+|+..- ... .+ . ...+|.|+++. .|+++=.- ...+.++++
T Consensus 187 -G~-------~V~~~dr~~~------~~~----g~-~---------~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~ 236 (333)
T 3ba1_A 187 -DC-------PISYFSRSKK------PNT----NY-T---------YYGSVVELASN--SDILVVACPLTPETTHIINRE 236 (333)
T ss_dssp -TC-------CEEEECSSCC------TTC----CS-E---------EESCHHHHHHT--CSEEEECSCCCGGGTTCBCHH
T ss_pred -CC-------EEEEECCCch------hcc----Cc-e---------ecCCHHHHHhc--CCEEEEecCCChHHHHHhhHH
Confidence 54 5888887521 111 01 0 12468898887 78877432 124788899
Q ss_pred HHHHhhhcCCCCCeEEecCCCCC
Q 007456 426 VLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 426 vv~~M~~~~~erPIIF~LSNPt~ 448 (603)
.++.|. +..+|.-.|.-..
T Consensus 237 ~l~~mk----~gailIn~srG~~ 255 (333)
T 3ba1_A 237 VIDALG----PKGVLINIGRGPH 255 (333)
T ss_dssp HHHHHC----TTCEEEECSCGGG
T ss_pred HHhcCC----CCCEEEECCCCch
Confidence 999993 4668877776543
No 104
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=84.32 E-value=2.2 Score=46.52 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=63.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.+|.|+|+|..|..+|..|.+. |. +++++|+.- +.-..+.+....-.......++.|+
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~~----------~~~~~l~~~g~~g~~i~~~~s~~e~ 62 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----------SKVDDFLANEAKGTKVVGAQSLKEM 62 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----------HHHHHHHHTTTTTSSCEECSSHHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCCH----------HHHHHHHhcccCCCceeccCCHHHH
Confidence 6899999999999999888764 54 578888641 1111222110000000113678888
Q ss_pred hccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 404 VRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 404 V~~v-kptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
++.+ +||++| ++-.++...+++++.+.....+..||.-.||-.+
T Consensus 63 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~ 107 (484)
T 4gwg_A 63 VSKLKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEY 107 (484)
T ss_dssp HHTBCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred HhhccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCc
Confidence 8753 478776 4434455667788877654557778888988654
No 105
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=84.30 E-value=1.4 Score=45.37 Aligned_cols=114 Identities=15% Similarity=0.222 Sum_probs=62.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhh-----ccccccCCcC-CcccC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAA-----PFAKDPGDFM-GLREG 397 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~-----~fa~~~~~~~-~~~~~ 397 (603)
.||.|+|+|..|.++|..|.++... .. .-..+++++|+..-+. .+......++ .|-.. ..+. +....
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~-~~----~~~~~V~~~~r~~~~~-~~~~~~~l~~~~~~~~~~~~-~~~~~~i~~~ 94 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKN-NY----LFENEVRMWIRDEFVN-GERMVDIINNKHENTKYLKG-VPLPHNIVAH 94 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHH-CT----TBCSCEEEECCSCC----CCHHHHHHHHCBCTTTSTT-CBCCTTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCc-cC----CCCCeEEEEECChhhh-hHHHHHHHHhcCcccccCCc-ccCcCCeEEE
Confidence 4799999999999999999876420 00 0003688888753211 0001111100 00000 0000 00112
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhh----cCCCCCeEEecCCCCC
Q 007456 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRE----SDSVKPAIFAMSNPTM 448 (603)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~----~~~erPIIF~LSNPt~ 448 (603)
.++.|+++. .|++| ++. +....+++++.+.. ...+..+|..++|-.+
T Consensus 95 ~~~~ea~~~--aDvVi-lav-~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 95 SDLASVIND--ADLLI-FIV-PCQYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp SSTHHHHTT--CSEEE-ECC-CHHHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred CCHHHHHcC--CCEEE-EcC-CHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 467888876 68766 332 33567888888743 2345668888998654
No 106
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=84.23 E-value=20 Score=37.17 Aligned_cols=218 Identities=16% Similarity=0.140 Sum_probs=129.1
Q ss_pred HhCCCe-EEEeecCCCchHHHHHHHHh-hcCCccccCC---chhHHHHHHHHHHHHHHh---------CCC---------
Q 007456 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GLS--------- 317 (603)
Q Consensus 261 ~~~P~~-~Iq~EDf~~~naf~iL~ryr-~~~~~FnDDi---QGTaaV~lAgll~A~r~t---------g~~--------- 317 (603)
...|+. .|+.--.+..|- .+ +..+ .-+.+.|--- +.+|=-+++.+|+..|-. |.-
T Consensus 81 ~~~~~Lk~I~~~~~G~d~i-d~-~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~ 158 (347)
T 1mx3_A 81 EKFKALRIIVRIGSGFDNI-DI-KSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIRE 158 (347)
T ss_dssp TTCSSCCEEEESSSCCTTB-CH-HHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHH
T ss_pred hhCCCCCEEEEcccccCcc-cH-HHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccc
Confidence 345777 888888887773 22 2233 3476766433 345556789999888721 110
Q ss_pred ----CCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCC
Q 007456 318 ----LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMG 393 (603)
Q Consensus 318 ----l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~ 393 (603)
..+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|++- . +.. ...+ ..
T Consensus 159 ~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~~----~-~~~---~~~~---g~---- 211 (347)
T 1mx3_A 159 VASGAARIRGETLGIIGLGRVGQAVALRAKAF-----GF-------NVLFYDPYL----S-DGV---ERAL---GL---- 211 (347)
T ss_dssp HTTTCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECTTS----C-TTH---HHHH---TC----
T ss_pred cccCccCCCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECCCc----c-hhh---Hhhc---CC----
Confidence 1356669999999999999999987643 54 588888641 1 101 1111 00
Q ss_pred cccCCCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE-
Q 007456 394 LREGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA- 468 (603)
Q Consensus 394 ~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~A- 468 (603)
....+|.|+++. .|+++=.- ...+.++++.++.|. +..++.=.|+=..--|..-.+|++ +|+.--|
T Consensus 212 -~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~ 282 (347)
T 1mx3_A 212 -QRVSTLQDLLFH--SDCVTLHCGLNEHNHHLINDFTVKQMR----QGAFLVNTARGGLVDEKALAQALK--EGRIRGAA 282 (347)
T ss_dssp -EECSSHHHHHHH--CSEEEECCCCCTTCTTSBSHHHHTTSC----TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEE
T ss_pred -eecCCHHHHHhc--CCEEEEcCCCCHHHHHHhHHHHHhcCC----CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEE
Confidence 012478999887 78877432 224788899999883 567888888755533444445544 4544432
Q ss_pred ----cCCCCCceecCCCeeeccccccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCC
Q 007456 469 ----SGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMT 527 (603)
Q Consensus 469 ----tGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~ 527 (603)
..-|+++ . +. .--..+|+.+-|=++- -.....+.|...+++.+.....
T Consensus 283 lDV~~~EP~~~---~-~~--~L~~~~nvi~tPHia~-----~t~~~~~~~~~~~~~ni~~~~~ 334 (347)
T 1mx3_A 283 LDVHESEPFSF---S-QG--PLKDAPNLICTPHAAW-----YSEQASIEMREEAAREIRRAIT 334 (347)
T ss_dssp ESCCSSSSCCT---T-SS--TTTTCSSEEECSSCTT-----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecccCCCCC---C-Cc--hHHhCCCEEEEchHHH-----HHHHHHHHHHHHHHHHHHHHHc
Confidence 2222211 0 11 1124789999998763 2223335566666666666653
No 107
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.13 E-value=1.3 Score=46.40 Aligned_cols=99 Identities=19% Similarity=0.290 Sum_probs=60.5
Q ss_pred CCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCC
Q 007456 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (603)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 399 (603)
++...+++|+|+|..|..+|+.+... |. +++.+|++.- .+...+..+.... ... .....+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~-----Ga-------~V~~~d~~~~------~l~~~~~~~g~~~-~~~-~~~~~~ 224 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGM-----GA-------TVTVLDINID------KLRQLDAEFCGRI-HTR-YSSAYE 224 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCHH------HHHHHHHHTTTSS-EEE-ECCHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCHH------HHHHHHHhcCCee-Eec-cCCHHH
Confidence 45569999999999999998877653 43 5888887410 1111111121100 000 001235
Q ss_pred HHHHhcccCCcEEEeecCCC-----CCCCHHHHHHhhhcCCCCCeEEecC
Q 007456 400 LLEVVRKVKPHVLLGLSGVG-----GVFNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~-----g~Ft~evv~~M~~~~~erPIIF~LS 444 (603)
+.+.++. .|++|.+...+ ..++++.++.|. +.-+|.=+|
T Consensus 225 l~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk----~g~~iV~va 268 (377)
T 2vhw_A 225 LEGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK----PGAVLVDIA 268 (377)
T ss_dssp HHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC----TTCEEEEGG
T ss_pred HHHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC----CCcEEEEEe
Confidence 7888876 79999876544 457899999993 345666666
No 108
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=84.11 E-value=1.6 Score=43.90 Aligned_cols=100 Identities=14% Similarity=0.129 Sum_probs=54.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcc---cccc--C-CcCCcccC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF---AKDP--G-DFMGLREG 397 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~f---a~~~--~-~~~~~~~~ 397 (603)
.||.|+|+|..|..+|..+... |. +++++|++.= .+...++.. .... . ........
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g~-------~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----GQ-------SVLAWDIDAQ------RIKEIQDRGAIIAEGPGLAGTAHPDLLT 66 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCHH------HHHHHHHHTSEEEESSSCCEEECCSEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCHH------HHHHHHhcCCeEEeccccccccccceec
Confidence 6899999999999999887553 42 5888887421 011111100 0000 0 00000012
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007456 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (603)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN 445 (603)
.++.++++. +|++|=+. +....+++++.++....+..+|+.+.|
T Consensus 67 ~~~~~~~~~--~D~vi~~v--~~~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 67 SDIGLAVKD--ADVILIVV--PAIHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp SCHHHHHTT--CSEEEECS--CGGGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred CCHHHHHhc--CCEEEEeC--CchHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 467787765 68776332 223347888877543444556666655
No 109
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=84.09 E-value=0.55 Score=52.93 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=30.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.||+|+|||..|..+|+.|+.+.+ ++|.++|.+=
T Consensus 327 arVLIVGaGGLGs~vA~~La~aGV-----------G~ItLvD~D~ 360 (615)
T 4gsl_A 327 TKVLLLGAGTLGCYVSRALIAWGV-----------RKITFVDNGT 360 (615)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----------CEEEEECCCB
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEEcCCC
Confidence 999999999999999999988644 6899999973
No 110
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=83.90 E-value=0.95 Score=45.72 Aligned_cols=104 Identities=19% Similarity=0.220 Sum_probs=57.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcccc-ccCC--cCCcccCCCH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGD--FMGLREGASL 400 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~-~~~~--~~~~~~~~~L 400 (603)
.||.|+|+|+-|..+|..|..+ | .+++++|+.-. + .+...-..+-. ...+ +.......++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~--~---~i~~~Gl~~~~~~~g~~~~~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDY--E---TVKAKGIRIRSATLGDYTFRPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTH--H---HHHHHCEEEEETTTCCEEECCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChH--H---HHHhCCcEEeecCCCcEEEeeeeeECCH
Confidence 6899999999999999888653 4 26888887531 0 01100000000 0000 0000012345
Q ss_pred HHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 401 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
.++.+ .+|++| ++. +--.++++++.++....+..+|+.+.|--.
T Consensus 66 ~~~~~--~~DlVi-lav-K~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCI-KVVEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECC-CCCTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-Eec-CCCChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 55443 368777 554 333456888888654455678888999764
No 111
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=83.83 E-value=5 Score=41.73 Aligned_cols=138 Identities=17% Similarity=0.225 Sum_probs=75.7
Q ss_pred CCccccCC---chhHHHHHHHHHHHHHHh---------C----C-CC---CCCCCceEEEeCcchhHHHHHHHHHHHHHH
Q 007456 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------G----L-SL---TDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (603)
Q Consensus 289 ~~~FnDDi---QGTaaV~lAgll~A~r~t---------g----~-~l---~dl~~~riv~~GAGsAg~GiA~li~~~~~~ 348 (603)
+++.|--- ..+|=-+++-+|+..|-. | . .. .+|.+.+|.|+|.|..|..+|+.+...
T Consensus 117 I~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~--- 193 (340)
T 4dgs_A 117 IDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAF--- 193 (340)
T ss_dssp CEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHTT---
T ss_pred EEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHHC---
Confidence 55555322 234555677777777631 1 0 11 345559999999999999999987643
Q ss_pred hcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC----CCCCCCH
Q 007456 349 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNE 424 (603)
Q Consensus 349 ~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~ 424 (603)
|+ +++.+|+..- . .. .+. ...+|.|+++. .|+++=.-- ..+.+++
T Consensus 194 --G~-------~V~~~dr~~~----~-~~-----~~~----------~~~sl~ell~~--aDvVil~vP~t~~t~~li~~ 242 (340)
T 4dgs_A 194 --GM-------SVRYWNRSTL----S-GV-----DWI----------AHQSPVDLARD--SDVLAVCVAASAATQNIVDA 242 (340)
T ss_dssp --TC-------EEEEECSSCC----T-TS-----CCE----------ECSSHHHHHHT--CSEEEECC----------CH
T ss_pred --CC-------EEEEEcCCcc----c-cc-----Cce----------ecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhH
Confidence 54 5888887421 0 00 110 12579999987 798874321 2478899
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEE
Q 007456 425 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIV 466 (603)
Q Consensus 425 evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai 466 (603)
+.++.|. +.-++.=.|+=..--|-.-.+|++ +|+.-
T Consensus 243 ~~l~~mk----~gailIN~aRG~vvde~aL~~aL~--~g~i~ 278 (340)
T 4dgs_A 243 SLLQALG----PEGIVVNVARGNVVDEDALIEALK--SGTIA 278 (340)
T ss_dssp HHHHHTT----TTCEEEECSCC----------------CCSS
T ss_pred HHHhcCC----CCCEEEECCCCcccCHHHHHHHHH--cCCce
Confidence 9999993 567888888755544555555554 45543
No 112
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=83.81 E-value=1.5 Score=44.17 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=26.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 7899999999999999998764 43 57888874
No 113
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=83.57 E-value=0.86 Score=44.32 Aligned_cols=97 Identities=14% Similarity=0.147 Sum_probs=57.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.||.|+|+|..|..+|..+... |. +.++++|++. +.+. .+++... . ....++.|+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~------~~~~----~~~~~~g-~---~~~~~~~~~ 65 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE------ESAR----ELAQKVE-A---EYTTDLAEV 65 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH------HHHH----HHHHHTT-C---EEESCGGGS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH------HHHH----HHHHHcC-C---ceeCCHHHH
Confidence 7999999999999999887653 43 2377787631 0111 1111100 0 012356666
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007456 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (603)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~ 449 (603)
++. +|++|=+. .+.. .+++++.+.+...+..+|.-+||-.+.
T Consensus 66 ~~~--~Dvvi~av-~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~~~ 107 (266)
T 3d1l_A 66 NPY--AKLYIVSL-KDSA-FAELLQGIVEGKREEALMVHTAGSIPM 107 (266)
T ss_dssp CSC--CSEEEECC-CHHH-HHHHHHHHHTTCCTTCEEEECCTTSCG
T ss_pred hcC--CCEEEEec-CHHH-HHHHHHHHHhhcCCCcEEEECCCCCch
Confidence 664 78877333 2333 378888775423356788888885553
No 114
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=83.47 E-value=2.8 Score=42.71 Aligned_cols=121 Identities=21% Similarity=0.245 Sum_probs=71.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||..|.++|..++.. |+- ..++|+|.+-= ..+. .++.+ +..+ .. ....++ +
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~~-----~ev~L~Di~~~-~~g~a~dl~~----~~~~--~i---~~t~d~-~ 73 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GIA-----DRLVLLDLSEG-TKGATMDLEI----FNLP--NV---EISKDL-S 73 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECCC------CHHHHHH----HTCT--TE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CCC-----CEEEEEcCCcc-hHHHHHHHhh----hcCC--Ce---EEeCCH-H
Confidence 6899999999999999988643 431 57999998631 1111 01221 1111 11 112456 6
Q ss_pred HhcccCCcEEEeecCCC--CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccC--CcEEE
Q 007456 403 VVRKVKPHVLLGLSGVG--GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAG--ENIVF 467 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~--g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~--Grai~ 467 (603)
+++. .|++|=+.+.+ |- .-+++++.|.+ +++.-+|+-.|||.. ...+-+++.+. -.-+|
T Consensus 74 ~l~~--aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~sNP~~---~~t~~~~~~~~~p~~rvi 147 (303)
T 2i6t_A 74 ASAH--SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGH-YSQHSVLLVASQPVE---IMTYVTWKLSTFPANRVI 147 (303)
T ss_dssp GGTT--CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEECSSSHH---HHHHHHHHHHCCCGGGEE
T ss_pred HHCC--CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcCChHH---HHHHHHHHhcCCCHHHee
Confidence 7777 79888444332 21 13577788854 788999888999987 44444544321 12356
Q ss_pred EcCC
Q 007456 468 ASGS 471 (603)
Q Consensus 468 AtGS 471 (603)
.+|.
T Consensus 148 G~gt 151 (303)
T 2i6t_A 148 GIGC 151 (303)
T ss_dssp ECTT
T ss_pred CCCC
Confidence 7653
No 115
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=83.44 E-value=3.1 Score=42.19 Aligned_cols=116 Identities=15% Similarity=0.197 Sum_probs=65.2
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcc
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~f 384 (603)
++.+++..+. +... .+|.|+|+|..|..++..+... .|. ++++++|+. .+..+.|
T Consensus 122 ~~~la~~~la--~~~~---~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----------~~~~~~l 176 (312)
T 2i99_A 122 VSAIATKFLK--PPSS---EVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----------KENAEKF 176 (312)
T ss_dssp HHHHHHHHHS--CTTC---CEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----------HHHHHHH
T ss_pred HHHHHHHHhC--CCCC---cEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----------HHHHHHH
Confidence 3445553332 3345 8999999999999998887653 243 478888863 1111223
Q ss_pred ccccC-CcCCcccCCCHHHHhcccCCcEEEeecCC-CCCCCHHHHHHhhhcCCCCCeEEecCC--CCCccCCCHHHHhc
Q 007456 385 AKDPG-DFMGLREGASLLEVVRKVKPHVLLGLSGV-GGVFNEEVLKAMRESDSVKPAIFAMSN--PTMNAECTAADAFK 459 (603)
Q Consensus 385 a~~~~-~~~~~~~~~~L~e~V~~vkptvLIG~S~~-~g~Ft~evv~~M~~~~~erPIIF~LSN--Pt~~aE~tpeda~~ 459 (603)
++... .. ....++.|+++. +|++|=+... ...|.+ ..+ .+.-+|+.+|+ |.. .|+.+ ++.+
T Consensus 177 ~~~~~~~~---~~~~~~~e~v~~--aDiVi~atp~~~~v~~~---~~l----~~g~~vi~~g~~~p~~-~el~~-~~~~ 241 (312)
T 2i99_A 177 ADTVQGEV---RVCSSVQEAVAG--ADVIITVTLATEPILFG---EWV----KPGAHINAVGASRPDW-RELDD-ELMK 241 (312)
T ss_dssp HHHSSSCC---EECSSHHHHHTT--CSEEEECCCCSSCCBCG---GGS----CTTCEEEECCCCSTTC-CSBCH-HHHH
T ss_pred HHHhhCCe---EEeCCHHHHHhc--CCEEEEEeCCCCcccCH---HHc----CCCcEEEeCCCCCCCc-eeccH-HHHh
Confidence 32210 01 124679999987 7988854321 123333 122 35568888853 543 45554 4433
No 116
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=83.41 E-value=1.2 Score=43.94 Aligned_cols=32 Identities=28% Similarity=0.409 Sum_probs=26.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----GC-------SVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 6899999999999999988764 43 57777874
No 117
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=83.32 E-value=1.2 Score=47.70 Aligned_cols=126 Identities=17% Similarity=0.158 Sum_probs=76.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHH-hcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAAR-MAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLL 401 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~-~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~ 401 (603)
.||.|+|||+. .+..++..+.. ..++. -..|+|+|.+- +| +...+....+++....+ ....++.
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v---~~t~d~~ 68 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKV---LISDTFE 68 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEE---EECSSHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEE---EEeCCHH
Confidence 69999999995 66665554552 24552 25799999753 11 00111111111111111 1235788
Q ss_pred HHhcccCCcEEEeecCCCC---------------CC-------------------CHHHHHHhhhcCCCCCeEEecCCCC
Q 007456 402 EVVRKVKPHVLLGLSGVGG---------------VF-------------------NEEVLKAMRESDSVKPAIFAMSNPT 447 (603)
Q Consensus 402 e~V~~vkptvLIG~S~~~g---------------~F-------------------t~evv~~M~~~~~erPIIF~LSNPt 447 (603)
|+++. .|++|=..+.++ .+ =.++++.|. ++| .-+|+-.|||.
T Consensus 69 ~al~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~-~~~-~A~lin~TNPv 144 (417)
T 1up7_A 69 GAVVD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVR-KTS-NATIVNFTNPS 144 (417)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHH-HTT-CCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHH-HHC-CEEEEEeCChH
Confidence 99998 799886665542 22 358889996 499 99999999998
Q ss_pred CccCCCHHHHhcccCCcEEEEcC
Q 007456 448 MNAECTAADAFKHAGENIVFASG 470 (603)
Q Consensus 448 ~~aE~tpeda~~wt~Grai~AtG 470 (603)
. +..+-+++.+.-.-+|.+|
T Consensus 145 d---i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 145 G---HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp H---HHHHHHHHTTCCSSEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 6 4555566766442566654
No 118
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=83.30 E-value=0.54 Score=46.38 Aligned_cols=34 Identities=29% Similarity=0.494 Sum_probs=29.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.||+|+|+|..|..+|..|+.+ |. ++|.++|.+-
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 8999999999999999998876 44 5899999973
No 119
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=82.87 E-value=1.8 Score=41.94 Aligned_cols=100 Identities=17% Similarity=0.113 Sum_probs=56.5
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHh
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVV 404 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V 404 (603)
||.|+|+|..|..+|..|.+. |. +++++|+.- . .+...+.... ....+.. ....+..+++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~r~~----~--~~~~l~~~~~-~~~~~~~-~~~~~~~~~~ 61 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----GH-------EVQGWLRVP----Q--PYCSVNLVET-DGSIFNE-SLTANDPDFL 61 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----C--SEEEEEEECT-TSCEEEE-EEEESCHHHH
T ss_pred eEEEECcCHHHHHHHHHHHhC-----CC-------CEEEEEcCc----c--ceeeEEEEcC-CCceeee-eeeecCcccc
Confidence 799999999999999888653 42 688888752 1 1111000000 0000000 0001224666
Q ss_pred cccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 405 RKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 405 ~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
+. .|++| ++..+. ..+++++.++....+..+|..++|...
T Consensus 62 ~~--~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~~ 101 (291)
T 1ks9_A 62 AT--SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGMG 101 (291)
T ss_dssp HT--CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSSC
T ss_pred CC--CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCCC
Confidence 65 78877 333233 358999988653445667777899653
No 120
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=82.75 E-value=0.53 Score=46.59 Aligned_cols=33 Identities=24% Similarity=0.448 Sum_probs=29.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||+|+|+|..|..+|..|+.+ |+ ++|.++|.+
T Consensus 29 ~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred CcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 9999999999999998888765 54 589999987
No 121
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=82.72 E-value=7 Score=40.75 Aligned_cols=193 Identities=15% Similarity=0.201 Sum_probs=109.9
Q ss_pred CCccccCC---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCcchhHHHHHHHHHHHHH
Q 007456 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (603)
Q Consensus 289 ~~~FnDDi---QGTaaV~lAgll~A~r~t---------g~---------~l~dl~~~riv~~GAGsAg~GiA~li~~~~~ 347 (603)
+++.|--- +.+|=-+++-+|+..|-. |. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 118 I~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~-- 195 (345)
T 4g2n_A 118 IKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF-- 195 (345)
T ss_dssp CEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT--
T ss_pred EEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC--
Confidence 55555432 345556788888877632 10 01345559999999999999999988653
Q ss_pred HhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC----CCCCCC
Q 007456 348 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFN 423 (603)
Q Consensus 348 ~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft 423 (603)
|+ +++.+|+... +... +.. . ....+|.|+++. .|+++=.-- ..+.|+
T Consensus 196 ---G~-------~V~~~dr~~~--------~~~~---~~g-~-----~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~ 246 (345)
T 4g2n_A 196 ---GL-------AIHYHNRTRL--------SHAL---EEG-A-----IYHDTLDSLLGA--SDIFLIAAPGRPELKGFLD 246 (345)
T ss_dssp ---TC-------EEEEECSSCC--------CHHH---HTT-C-----EECSSHHHHHHT--CSEEEECSCCCGGGTTCBC
T ss_pred ---CC-------EEEEECCCCc--------chhh---hcC-C-----eEeCCHHHHHhh--CCEEEEecCCCHHHHHHhC
Confidence 44 6888887531 1111 011 0 012479999987 798874321 238899
Q ss_pred HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCC-CCceecCCCeeeccccccccccchhhHHHH
Q 007456 424 EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP-FENVDLGNGKIGHVNQANNMYLFPGIGLGT 502 (603)
Q Consensus 424 ~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSP-f~pv~~~~G~~~~p~Q~NN~~iFPGiglG~ 502 (603)
++.++.|. +..|+.=.|+-..--|---.+|++ +|+.-.| |-. |++-. + ....--+..|+.+-|=+|-..
T Consensus 247 ~~~l~~mk----~gailIN~aRG~~vde~aL~~aL~--~g~i~gA-~LDVf~~EP-~--~~~pL~~~~nvilTPHia~~t 316 (345)
T 4g2n_A 247 HDRIAKIP----EGAVVINISRGDLINDDALIEALR--SKHLFAA-GLDVFANEP-A--IDPRYRSLDNIFLTPHIGSAT 316 (345)
T ss_dssp HHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE-EESCCTTTT-S--CCTTGGGCTTEEECCSCTTCB
T ss_pred HHHHhhCC----CCcEEEECCCCchhCHHHHHHHHH--hCCceEE-EecCCCCCC-C--CCchHHhCCCEEEcCccCcCC
Confidence 99999993 577888888754433333344443 4654433 211 11000 0 001112345788888665321
Q ss_pred HHhCCcccCHHHHHHHHHHHhccCC
Q 007456 503 LLSGARFITDGMLQQAAECLASYMT 527 (603)
Q Consensus 503 ~~~~a~~Itd~m~~aAA~aLA~~v~ 527 (603)
..--+.|...+++.|.....
T Consensus 317 -----~e~~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 317 -----HETRDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHHHHHHHHc
Confidence 11224566666666666554
No 122
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=82.62 E-value=0.58 Score=52.57 Aligned_cols=37 Identities=24% Similarity=0.447 Sum_probs=31.6
Q ss_pred CCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+|++ .||+|+|||..|..+|..|+.+ |+ ++|.++|.+
T Consensus 324 kL~~---~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 324 IIKN---TKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHT---CEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHhC---CeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 4455 9999999999999999998876 44 689999987
No 123
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=82.49 E-value=1.4 Score=47.54 Aligned_cols=104 Identities=13% Similarity=0.162 Sum_probs=60.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcccc-ccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK-DPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~-~~~~~~~~~~~~~L~e 402 (603)
.||.|+|+|..|..+|..|.+. |. +++++|+..= .+....+.+-. +..+ +.....++.|
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~~------~~~~l~~~~g~~~~~~--~i~~~~~~~e 61 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTYS------KSEEFMKANASAPFAG--NLKAFETMEA 61 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSHH------HHHHHHHHTTTSTTGG--GEEECSCHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCHH------HHHHHHHhcCCCCCCC--CeEEECCHHH
Confidence 4799999999999999888653 53 5788886411 01111110000 0000 0012357888
Q ss_pred Hhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 403 VVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 403 ~V~~v-kptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
+++.. ++|++| ++..++...+++++.+.....+.-||.-+||-.+
T Consensus 62 ~v~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~ 107 (478)
T 1pgj_A 62 FAASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHF 107 (478)
T ss_dssp HHHHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCH
T ss_pred HHhcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCCh
Confidence 88753 478877 4433444567777776443445568888888654
No 124
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=82.32 E-value=4 Score=41.65 Aligned_cols=115 Identities=19% Similarity=0.138 Sum_probs=64.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.||.|+|||+.|..+|-+|.. .|+- ..++++|.+- ++ +......+.+..+-.....-..+-.++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~~-----~ev~L~Di~~----~~--~~g~~~dl~~~~~~~~~~~i~~~~~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQTA-----NELVLIDVFK----EK--AIGEAMDINHGLPFMGQMSLYAGDYSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCS-----SEEEEECCC---------CCHHHHHHTTSCCCTTCEEEC--CGGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCCh----HH--HHHHHHHHHHhHHhcCCeEEEECCHHH
Confidence 689999999999998877644 3441 4799999851 11 222112222111000000000122556
Q ss_pred hcccCCcEEEeecCCC---CC-------C----CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007456 404 VRKVKPHVLLGLSGVG---GV-------F----NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (603)
Q Consensus 404 V~~vkptvLIG~S~~~---g~-------F----t~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~w 460 (603)
++. .|++|=+.+.| |- . -+++++.|.+ +++.-+|+=.|||.. .+.+-+++.
T Consensus 72 ~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNPv~---~~~~~~~k~ 136 (318)
T 1y6j_A 72 VKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMK-YYNHGVILVVSNPVD---IITYMIQKW 136 (318)
T ss_dssp GTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHH-HCCSCEEEECSSSHH---HHHHHHHHH
T ss_pred hCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHH-hCCCcEEEEecCcHH---HHHHHHHHH
Confidence 776 78887444433 32 1 1688888864 788889888999986 344445454
No 125
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=82.19 E-value=0.75 Score=47.58 Aligned_cols=106 Identities=17% Similarity=0.276 Sum_probs=61.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||..|.++|..|.. .|+. .+.++|.+-=..++ ..+|.+.. .|......+ ....+. +
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~-----~~~~------~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v---~~t~d~-~ 71 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGL-----KELG------DVVLFDIAEGTPQGKGLDIAESS-PVDGFDAKF---TGANDY-A 71 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHHHH-HHHTCCCCE---EEESSG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCCchhHHHHHHHHhchh-hhcCCCCEE---EEeCCH-H
Confidence 799999999999999887765 3552 59999975211100 00222221 122111111 011344 7
Q ss_pred HhcccCCcEEEeecC---CCCC-----C--C----HHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 403 VVRKVKPHVLLGLSG---VGGV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 403 ~V~~vkptvLIG~S~---~~g~-----F--t----~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
++++ .|++|=+.+ .+|- | + +++++.|.+ +++.-+|+-.|||..
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~iivvtNPvd 128 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKK-YAPEAFVICITNPLD 128 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHH-HCCCeEEEecCCCcH
Confidence 8877 688774433 3342 1 2 456667754 788899999999985
No 126
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=82.17 E-value=2.1 Score=45.58 Aligned_cols=94 Identities=15% Similarity=0.329 Sum_probs=51.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCCh-hhhcCeEEEEecCC-------cccCCCC---CCChhhhccccccCCcC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNND-AFARNKFFLLDKDG-------LITKERK---NLDPAAAPFAKDPGDFM 392 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~-~eA~~~i~lvD~~G-------Lv~~~r~---~l~~~k~~fa~~~~~~~ 392 (603)
.||.|+|||+=|+++|..|.+... +.+. -+-.=++|..|..= .+.+.+. .|+..+.+ +.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~---~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp-----~~-- 104 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCK---GYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP-----DN-- 104 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHH---HCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC-----SS--
T ss_pred CeEEEECcCHHHHHHHHHHHHcCC---CccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC-----CC--
Confidence 599999999999999999988643 1110 00012467655431 0111111 12222211 00
Q ss_pred CcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhh
Q 007456 393 GLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRE 432 (603)
Q Consensus 393 ~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~ 432 (603)
..-..+|.|+++. .|++|= ++|-.|-+++++.+..
T Consensus 105 -i~~t~dl~~al~~--ad~ii~--avPs~~~r~~l~~l~~ 139 (391)
T 4fgw_A 105 -LVANPDLIDSVKD--VDIIVF--NIPHQFLPRICSQLKG 139 (391)
T ss_dssp -EEEESCHHHHHTT--CSEEEE--CSCGGGHHHHHHHHTT
T ss_pred -cEEeCCHHHHHhc--CCEEEE--ECChhhhHHHHHHhcc
Confidence 1123578888877 566542 1244577788887754
No 127
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=82.05 E-value=1.3 Score=44.65 Aligned_cols=48 Identities=17% Similarity=0.336 Sum_probs=34.7
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.|+..+++-.|.. .. .+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~---~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KN---AKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TT---SCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CC---CEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 4566666655543 45 899999999999988877655 354 479988874
No 128
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=81.99 E-value=1.5 Score=44.95 Aligned_cols=111 Identities=16% Similarity=0.144 Sum_probs=64.1
Q ss_pred ceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC--Cc---ccCCCCCCChhhhccccccCCcCCcccC
Q 007456 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD--GL---ITKERKNLDPAAAPFAKDPGDFMGLREG 397 (603)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~--GL---v~~~r~~l~~~k~~fa~~~~~~~~~~~~ 397 (603)
.||+|.|| |..|..++..|+. .|+-..+-...++++|.+ .. +.....+|.+.-.+|..+- ...
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i------~~~ 74 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGM------TAH 74 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEE------EEE
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcE------EEe
Confidence 69999998 9999998776654 243111112369999975 10 0000001111000121110 123
Q ss_pred CCHHHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCC-CCCeEEecCCCCC
Q 007456 398 ASLLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDS-VKPAIFAMSNPTM 448 (603)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~-erPIIF~LSNPt~ 448 (603)
.++.+++++ .|++|=+.+.+ |- .++++++.+.+ ++ ...+|+=.|||..
T Consensus 75 ~~~~~al~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~~p~a~ii~~SNPv~ 137 (329)
T 1b8p_A 75 ADPMTAFKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDA-VASRNIKVLVVGNPAN 137 (329)
T ss_dssp SSHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSHH
T ss_pred cCcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEEEccCchH
Confidence 578999988 68888554433 32 35678888864 65 7777777899984
No 129
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=81.87 E-value=4.2 Score=42.80 Aligned_cols=184 Identities=18% Similarity=0.118 Sum_probs=101.2
Q ss_pred hhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcC
Q 007456 298 GTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARN 359 (603)
Q Consensus 298 GTaaV~lAgll~A~r~t---------g~---------~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~ 359 (603)
.+|=-+++-+|+..|-. |. .-.+|.+.++.|+|.|..|-.+|+.+.. -|+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------
Confidence 34555777777777621 21 1235666999999999999999997754 354
Q ss_pred eEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEee----cCCCCCCCHHHHHHhhhcCC
Q 007456 360 KFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGL----SGVGGVFNEEVLKAMRESDS 435 (603)
Q Consensus 360 ~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~----S~~~g~Ft~evv~~M~~~~~ 435 (603)
+++.+|+.. .... ...... ...+|.|+++. .|+++=. ....+.|+++.++.|.
T Consensus 201 ~V~~~d~~~---------~~~~--~~~~g~------~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---- 257 (365)
T 4hy3_A 201 RIRVFDPWL---------PRSM--LEENGV------EPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---- 257 (365)
T ss_dssp EEEEECSSS---------CHHH--HHHTTC------EECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC----
T ss_pred EEEEECCCC---------CHHH--HhhcCe------eeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC----
Confidence 688788641 1110 001100 12479999987 7998832 2235789999999993
Q ss_pred CCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCC-CCceecCCCeeeccccccccccchhhHHHHHHhCCcccCHHH
Q 007456 436 VKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP-FENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGM 514 (603)
Q Consensus 436 erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSP-f~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m 514 (603)
+..|+.=.|.-..--|---.+|++ .|+.- | |-. |++-..+.+ ..--+..|+.+-|=+|-.. ..--+.|
T Consensus 258 ~gailIN~aRG~~vde~aL~~aL~--~g~i~-a-aLDV~~~EPl~~~--~pL~~~~nvilTPHia~~t-----~e~~~~~ 326 (365)
T 4hy3_A 258 RGAAFILLSRADVVDFDALMAAVS--SGHIV-A-ASDVYPEEPLPLD--HPVRSLKGFIRSAHRAGAL-----DSAFKKM 326 (365)
T ss_dssp TTCEEEECSCGGGSCHHHHHHHHH--TTSSE-E-EESCCSSSSCCTT--CGGGTCTTEEECCSCSSCC-----HHHHHHH
T ss_pred CCcEEEECcCCchhCHHHHHHHHH--cCCce-E-EeeCCCCCCCCCC--ChhhcCCCEEECCccccCH-----HHHHHHH
Confidence 577888888754432333344544 56654 3 311 111000000 0112345677777655321 1122445
Q ss_pred HHHHHHHHhccCC
Q 007456 515 LQQAAECLASYMT 527 (603)
Q Consensus 515 ~~aAA~aLA~~v~ 527 (603)
...+++.|.....
T Consensus 327 ~~~~~~ni~~~~~ 339 (365)
T 4hy3_A 327 GDMVLEDMDLMDR 339 (365)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 5555555555543
No 130
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=81.82 E-value=2.3 Score=44.20 Aligned_cols=105 Identities=18% Similarity=0.185 Sum_probs=58.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhh--hccccccCCcC-CcccCCCH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA--APFAKDPGDFM-GLREGASL 400 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k--~~fa~~~~~~~-~~~~~~~L 400 (603)
.||.|+|+|+-|..+|..|.+. |. +++++|++--..+ .+.... ..|... -.+. ...-..++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-----G~-------~V~l~~r~~~~~~---~i~~~~~~~~~l~g-~~l~~~i~~t~d~ 93 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-----GQ-------KVRLWSYESDHVD---EMQAEGVNNRYLPN-YPFPETLKAYCDL 93 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSCHHHHH---HHHHHSSBTTTBTT-CCCCTTEEEESCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCCHHHHH---HHHHcCCCcccCCC-CccCCCeEEECCH
Confidence 6899999999999999888653 42 5777777411000 000000 001000 0000 00112568
Q ss_pred HHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 401 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
.|+++. +|++| ++ .|-.+.+++++.++....+..+|..++|-..
T Consensus 94 ~ea~~~--aDvVi-la-Vp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 94 KASLEG--VTDIL-IV-VPSFAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHTT--CCEEE-EC-CCHHHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHhc--CCEEE-EC-CCHHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 888876 57766 33 2334677788777543445667777888554
No 131
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=81.80 E-value=1.6 Score=44.93 Aligned_cols=114 Identities=18% Similarity=0.228 Sum_probs=65.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||+.|..++-+|+.. ++ -..|+|+|.+-=-.++ ..+|.+.. +|..+. . -..+..+
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~-~-----i~~~~~~ 72 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPK-K-----IYSAEYS 72 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCC-E-----EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCe-E-----EEECCHH
Confidence 6899999999999988876442 43 1579999984100000 00122211 232111 0 0113466
Q ss_pred HhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007456 403 VVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~w 460 (603)
+++. .|++|=+.+.+ |- .-+++++.|.+ +++.-+|+-.|||.. ...+-+++.
T Consensus 73 a~~~--aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~---~~t~~~~k~ 138 (326)
T 2zqz_A 73 DAKD--ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAANPVD---ILTYATWKL 138 (326)
T ss_dssp GGGG--CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHH-HTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEeCCcHH---HHHHHHHHH
Confidence 7777 79888554433 31 12456666643 789999999999987 344455553
No 132
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=81.66 E-value=1.5 Score=43.39 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=26.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----GF-------DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 4799999999999999998775 42 57778874
No 133
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=81.54 E-value=1.9 Score=44.29 Aligned_cols=114 Identities=19% Similarity=0.264 Sum_probs=65.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||+.|..++-+|+.. ++- ..|+|+|.+-=-.++ ..+|.+.. +|.++. .. ..+..+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~~-----~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~-~v-----~~~~~~ 68 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GIA-----EEFVIVDVVKDRTKGDALDLEDAQ-AFTAPK-KI-----YSGEYS 68 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHGGG-GGSCCC-EE-----EECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CCC-----CEEEEEeCCchHHHHHHHHHHHHH-HhcCCe-EE-----EECCHH
Confidence 6999999999999988776542 441 579999974100000 00122221 232211 00 113456
Q ss_pred HhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007456 403 VVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~w 460 (603)
+++. .|++|=+.+.+ |- .-+++++.|. +++..-+|+-.|||.. ...+-+++.
T Consensus 69 a~~~--aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~-~~~p~a~iiv~tNPv~---~~t~~~~k~ 134 (318)
T 1ez4_A 69 DCKD--ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVV-DSGFDGIFLVAANPVD---ILTYATWKF 134 (318)
T ss_dssp GGTT--CSEEEECCCC----------CHHHHHHHHHHHHHHHH-HTTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HhCCCeEEEEeCCcHH---HHHHHHHHH
Confidence 6777 68887444433 31 2245666664 4889999999999987 344555554
No 134
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=81.50 E-value=1.9 Score=43.67 Aligned_cols=114 Identities=17% Similarity=0.204 Sum_probs=66.3
Q ss_pred ceEEEeC-cchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec--CCcccCC-CCCCChhhhccccccCCcCCcccCCC
Q 007456 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DGLITKE-RKNLDPAAAPFAKDPGDFMGLREGAS 399 (603)
Q Consensus 324 ~riv~~G-AGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~--~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~ 399 (603)
.||+|.| ||..|..++..|+. .|+- ..++|+|. +-=-.+. ..+|.+... +.++. .. ...+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~-----~~~~-----~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~-~v----~~~~ 64 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIAL-----RDIA-----DEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNT-RV----RQGG 64 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTCC-----SEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCC-EE----EECC
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCC-----CEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCc-EE----EeCC
Confidence 3899999 99999998887654 2432 46999997 3100000 012222211 11110 00 0122
Q ss_pred HHHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007456 400 LLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (603)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~w 460 (603)
.++++. .|++|=+.+.+ |- .++++++.|.+ ++.+.+|+-.|||.. ...+-+++.
T Consensus 65 -~~a~~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~p~~~viv~SNPv~---~~~~~~~~~ 132 (303)
T 1o6z_A 65 -YEDTAG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDE-HNDDYISLTTSNPVD---LLNRHLYEA 132 (303)
T ss_dssp -GGGGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHT-TCSCCEEEECCSSHH---HHHHHHHHH
T ss_pred -HHHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEeCChHH---HHHHHHHHH
Confidence 566776 78888555433 32 46678888854 888999999999985 344444443
No 135
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=81.47 E-value=0.8 Score=47.74 Aligned_cols=37 Identities=27% Similarity=0.530 Sum_probs=31.4
Q ss_pred CCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+|+. .||+|+|+|..|..+|..|+.+.+ ++|.++|.+
T Consensus 115 ~L~~---~~VlvvG~GglGs~va~~La~aGv-----------g~i~lvD~D 151 (353)
T 3h5n_A 115 KLKN---AKVVILGCGGIGNHVSVILATSGI-----------GEIILIDND 151 (353)
T ss_dssp HHHT---CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEEECC
T ss_pred HHhC---CeEEEECCCHHHHHHHHHHHhCCC-----------CeEEEECCC
Confidence 3455 999999999999999999888644 689999987
No 136
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=81.31 E-value=6.1 Score=41.24 Aligned_cols=219 Identities=16% Similarity=0.122 Sum_probs=121.9
Q ss_pred hCCCe-EEEeecCCCchHHHHHHHHh-hcCCccccCC---chhHHHHHHHHHHHHHH--------------------hCC
Q 007456 262 RWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRA--------------------QGL 316 (603)
Q Consensus 262 ~~P~~-~Iq~EDf~~~naf~iL~ryr-~~~~~FnDDi---QGTaaV~lAgll~A~r~--------------------tg~ 316 (603)
..|+. +|+.--.+..|- . ++..+ .-+.+.|--- +.+|=-+++-+|+..|- .+.
T Consensus 83 ~~p~Lk~i~~~g~G~d~i-d-~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~ 160 (351)
T 3jtm_A 83 KAKNLKLLLTAGIGSDHI-D-LQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAY 160 (351)
T ss_dssp HCSSCCEEEESSSCCTTB-C-HHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCC
T ss_pred hCCCCeEEEEeCeeeccc-C-HHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcc
Confidence 35665 666555555442 2 22222 2355555322 33455578888888762 133
Q ss_pred CCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCccc
Q 007456 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (603)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~ 396 (603)
.|.. .+|.|+|.|..|..+|+.+... |+ +++.+|+... .....+..-++ .
T Consensus 161 ~l~g---ktvGIIG~G~IG~~vA~~l~~~-----G~-------~V~~~dr~~~------~~~~~~~~g~~---------~ 210 (351)
T 3jtm_A 161 DLEG---KTIGTVGAGRIGKLLLQRLKPF-----GC-------NLLYHDRLQM------APELEKETGAK---------F 210 (351)
T ss_dssp CSTT---CEEEEECCSHHHHHHHHHHGGG-----CC-------EEEEECSSCC------CHHHHHHHCCE---------E
T ss_pred cccC---CEEeEEEeCHHHHHHHHHHHHC-----CC-------EEEEeCCCcc------CHHHHHhCCCe---------E
Confidence 4444 9999999999999999888653 54 5888887531 01111100000 1
Q ss_pred CCCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCC
Q 007456 397 GASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP 472 (603)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSP 472 (603)
..+|.|+++. .|+++=.- ..-+.|+++.++.|. +..+|.=.|+-..--|---.+|++ +|+.--|.--=
T Consensus 211 ~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk----~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV 282 (351)
T 3jtm_A 211 VEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELIGKLK----KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDV 282 (351)
T ss_dssp CSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESC
T ss_pred cCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHHhcCC----CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCC
Confidence 2479999988 79887331 224789999999993 678888888755433444445554 56654443322
Q ss_pred CCceecCCCeeeccccccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCC
Q 007456 473 FENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMT 527 (603)
Q Consensus 473 f~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~ 527 (603)
|.+-..+.. ..--+..|+.+-|=++-....++ ..|...+++-|.....
T Consensus 283 ~~~EP~~~~--~pL~~~~nvilTPHia~~t~ea~-----~~~~~~~~~nl~~~~~ 330 (351)
T 3jtm_A 283 WDPQPAPKD--HPWRYMPNQAMTPHTSGTTIDAQ-----LRYAAGTKDMLERYFK 330 (351)
T ss_dssp CSSSSCCTT--CGGGTSTTBCCCCSCGGGSHHHH-----HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCC--ChhhcCCCEEECCcCCCCCHHHH-----HHHHHHHHHHHHHHHc
Confidence 322111101 11124568888887754333332 2344445555555443
No 137
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=81.31 E-value=4.3 Score=40.89 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=27.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|.++|..|.+. |. ++++++|++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 6899999999999999998774 43 368888874
No 138
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=81.19 E-value=3.9 Score=42.34 Aligned_cols=183 Identities=14% Similarity=0.212 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHHHHHh-------------CCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEe
Q 007456 299 TAGVALAGLLGTVRAQ-------------GLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (603)
Q Consensus 299 TaaV~lAgll~A~r~t-------------g~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD 365 (603)
+|=-+++.+|+..|-. .....+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 4445677777776621 1122345559999999999999999988654 54 688888
Q ss_pred cCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEE
Q 007456 366 KDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIF 441 (603)
Q Consensus 366 ~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF 441 (603)
+.. +. ... +... ....+|.|+++. .|+++=.- ..-+.|+++.++.|. +..|+.
T Consensus 171 r~~---~~---~~~----~~~~-------~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk----~gailI 227 (324)
T 3hg7_A 171 RSG---RE---RAG----FDQV-------YQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK----PGAILF 227 (324)
T ss_dssp SSC---CC---CTT----CSEE-------ECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC----TTCEEE
T ss_pred CCh---HH---hhh----hhcc-------cccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC----CCcEEE
Confidence 764 11 111 1100 012579999987 78887431 124788888888883 577888
Q ss_pred ecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeccccccccccchhhHHHHHHhCCcccCHHHHHHHHHH
Q 007456 442 AMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAEC 521 (603)
Q Consensus 442 ~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~a 521 (603)
=.|.-..--|---.+|++ +|+.-.|.=-=|++-..+.. ..--+..|+.+-|=++- .+ ..+.|...+++-
T Consensus 228 N~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EPl~~~--~pL~~~~nvilTPHia~------~t-~~~~~~~~~~~n 296 (324)
T 3hg7_A 228 NVGRGNAINEGDLLTALR--TGKLGMAVLDVFEQEPLPAD--SPLWGQPNLIITPHNSA------YS-FPDDVAQIFVRN 296 (324)
T ss_dssp ECSCGGGBCHHHHHHHHH--TTSSSEEEESCCSSSSCCTT--CTTTTCTTEEECCSCSS------CC-CHHHHHHHHHHH
T ss_pred ECCCchhhCHHHHHHHHH--cCCceEEEeccCCCCCCCCC--ChhhcCCCEEEeCCCcc------cc-HHHHHHHHHHHH
Confidence 888755433333344443 45432221000100000000 01113457777776642 22 125666667777
Q ss_pred HhccCC
Q 007456 522 LASYMT 527 (603)
Q Consensus 522 LA~~v~ 527 (603)
|.....
T Consensus 297 l~~~~~ 302 (324)
T 3hg7_A 297 YIRFID 302 (324)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 766654
No 139
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=81.11 E-value=3.3 Score=44.28 Aligned_cols=97 Identities=20% Similarity=0.293 Sum_probs=61.5
Q ss_pred chhHHHHHHHHHHHHHHhCC---CCCCCC-------------------------CceEEEeCc-chhHHHHHHHHHHHHH
Q 007456 297 QGTAGVALAGLLGTVRAQGL---SLTDFA-------------------------DQKIVVVGA-GSAGLGVLKMAVQAAA 347 (603)
Q Consensus 297 QGTaaV~lAgll~A~r~tg~---~l~dl~-------------------------~~riv~~GA-GsAg~GiA~li~~~~~ 347 (603)
-|-++|..|+-.-+.+.+|. +|--++ .-|++|+|+ |-+|.|.++.+...
T Consensus 160 AG~~av~~a~~~lg~~~~g~~g~~l~~~~pm~s~~al~q~~~~~l~~~~~~g~~~~kV~ViG~~G~vG~~A~~~a~~l-- 237 (394)
T 2qrj_A 160 AGFAGAALGVRDWAFKQTHSDDEDLPAVSPYPNEKALVKDVTKDYKEALATGARKPTVLIIGALGRCGSGAIDLLHKV-- 237 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCCCCCCCCCSSHHHHHHHHHHHHHHHHTTTCCCCCEEEETTTSHHHHHHHHHHHHT--
T ss_pred hHHHHHHHHHHHHHHhhcCCccccCCCccCccCHHHHHHHHHHHHhhhhccCCCCCeEEEEcCCCHHHHHHHHHHHhC--
Confidence 46666666666666666665 333333 368999999 99999999887664
Q ss_pred HhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecCC----CCCCC
Q 007456 348 RMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGV----GGVFN 423 (603)
Q Consensus 348 ~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~----~g~Ft 423 (603)
|.. ..++..+|.+= +. + ... + +.++. .|++||+--. |-.+|
T Consensus 238 ---Ga~----~~~V~v~D~~~--~~-~-------------g~~---------~-~~i~~--aDivIn~vlig~~aP~Lvt 282 (394)
T 2qrj_A 238 ---GIP----DANILKWDIKE--TS-R-------------GGP---------F-DEIPQ--ADIFINCIYLSKPIAPFTN 282 (394)
T ss_dssp ---TCC----GGGEEEECHHH--HT-T-------------CSC---------C-THHHH--SSEEEECCCCCSSCCCSCC
T ss_pred ---CCC----cCceEEeeccc--cc-c-------------CCc---------h-hhHhh--CCEEEECcCcCCCCCcccC
Confidence 431 11466666641 11 0 000 1 12333 6889888654 67899
Q ss_pred HHHHHHh
Q 007456 424 EEVLKAM 430 (603)
Q Consensus 424 ~evv~~M 430 (603)
+|+|+.|
T Consensus 283 ~e~v~~m 289 (394)
T 2qrj_A 283 MEKLNNP 289 (394)
T ss_dssp HHHHCCT
T ss_pred HHHHhcC
Confidence 9999999
No 140
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=80.86 E-value=1.6 Score=42.92 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=25.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 6899999999999999887642 43 57888764
No 141
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=80.85 E-value=1.3 Score=42.22 Aligned_cols=93 Identities=14% Similarity=0.136 Sum_probs=56.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL-LDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~l-vD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|+|..|..+|..+... |. ++.+ +|++ .+.+....+.+- . ....+..|
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~------~~~~~~l~~~~g---~-----~~~~~~~~ 77 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG------PASLSSVTDRFG---A-----SVKAVELK 77 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC------GGGGHHHHHHHT---T-----TEEECCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC------HHHHHHHHHHhC---C-----CcccChHH
Confidence 6899999999999999887653 43 3554 5543 111222221111 0 01123455
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
+++. +|++| ++. +....+++++.++. .+..+|+-+|||.+
T Consensus 78 ~~~~--aDvVi-lav-p~~~~~~v~~~l~~--~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 78 DALQ--ADVVI-LAV-PYDSIADIVTQVSD--WGGQIVVDASNAID 117 (220)
T ss_dssp HHTT--SSEEE-EES-CGGGHHHHHTTCSC--CTTCEEEECCCCBC
T ss_pred HHhc--CCEEE-EeC-ChHHHHHHHHHhhc--cCCCEEEEcCCCCC
Confidence 6665 78877 332 44566788887743 34569999999984
No 142
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=80.58 E-value=1.6 Score=44.14 Aligned_cols=32 Identities=28% Similarity=0.515 Sum_probs=26.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 7999999999999999988764 43 57777764
No 143
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=80.38 E-value=13 Score=37.74 Aligned_cols=160 Identities=16% Similarity=0.166 Sum_probs=95.1
Q ss_pred CCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCC
Q 007456 319 TDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (603)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~ 398 (603)
.+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+..- . ... ++ ...
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~~---~---~~~-----~~---------~~~ 165 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYTRSSV---D---QNV-----DV---------ISE 165 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSCC---C---TTC-----SE---------ECS
T ss_pred eeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEecccc---c---ccc-----cc---------ccC
Confidence 455669999999999999999988764 44 6888887521 1 110 11 124
Q ss_pred CHHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCC
Q 007456 399 SLLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFE 474 (603)
Q Consensus 399 ~L~e~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~ 474 (603)
+|.|+++. .|+++=.- ...+.++++.++.|. +..+|.=.|.-..--|---.+|++ +|+.-.|.=--|.
T Consensus 166 ~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~aRG~~vd~~aL~~aL~--~g~i~ga~lDV~~ 237 (290)
T 3gvx_A 166 SPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR----KNLTIVNVARADVVSKPDMIGFLK--ERSDVWYLSDVWW 237 (290)
T ss_dssp SHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC----TTCEEEECSCGGGBCHHHHHHHHH--HCTTCEEEESCCT
T ss_pred ChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh----cCceEEEeehhcccCCcchhhhhh--hccceEEeecccc
Confidence 79999987 68877332 124789999999993 677888888754432333334443 3443332111111
Q ss_pred ceecCCCeeeccccccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCC
Q 007456 475 NVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMT 527 (603)
Q Consensus 475 pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~ 527 (603)
+ +- . ..--+..|+.+-|=++= .....-.+.|...+++-|.....
T Consensus 238 ~-EP--~--~pL~~~~nvilTPHiag----~~t~e~~~~~~~~~~~ni~~~~~ 281 (290)
T 3gvx_A 238 N-EP--E--ITETNLRNAILSPHVAG----GMSGEIMDIAIQLAFENVRNFFE 281 (290)
T ss_dssp T-TT--S--CCSCCCSSEEECCSCSS----CBTTBCCHHHHHHHHHHHHHHTC
T ss_pred C-Cc--c--cchhhhhhhhcCccccC----CccchHHHHHHHHHHHHHHhhhc
Confidence 0 00 0 11123457777776641 12334556777777777776654
No 144
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=80.34 E-value=1.6 Score=44.67 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=27.5
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
..||||+|+|.||+..|..|... |-+ -+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~~-----~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DPS-----IEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----CcC-----CeEEEEeCC
Confidence 47999999999999999988654 221 268889875
No 145
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=80.29 E-value=1.6 Score=43.53 Aligned_cols=49 Identities=18% Similarity=0.218 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 303 ~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
...|++.+++-.+.+++. .+++|+|||.+|.++|..+.+ .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~---k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKD---KNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCS---CEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCC---CEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678899999988887777 999999998555555554432 33 58888874
No 146
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=80.15 E-value=8.1 Score=39.70 Aligned_cols=90 Identities=14% Similarity=0.245 Sum_probs=58.7
Q ss_pred CCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCC
Q 007456 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (603)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 399 (603)
+|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+..- ......+ .. ...+
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~~--------~~~~~~~---g~------~~~~ 193 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHRK--------VNVEKEL---KA------RYMD 193 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSCC--------HHHHHHH---TE------EECC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCcc--------hhhhhhc---Cc------eecC
Confidence 4555999999999999999998754 343 6888887521 0110111 00 1136
Q ss_pred HHHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007456 400 LLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (603)
Q Consensus 400 L~e~V~~vkptvLIG~S~----~~g~Ft~evv~~M~~~~~erPIIF~LSN 445 (603)
|.|+++. .|+++=+-. ..+.++++.++.|. +. ++.-.|+
T Consensus 194 l~e~l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk----~g-ilin~sr 236 (333)
T 2d0i_A 194 IDELLEK--SDIVILALPLTRDTYHIINEERVKKLE----GK-YLVNIGR 236 (333)
T ss_dssp HHHHHHH--CSEEEECCCCCTTTTTSBCHHHHHHTB----TC-EEEECSC
T ss_pred HHHHHhh--CCEEEEcCCCChHHHHHhCHHHHhhCC----CC-EEEECCC
Confidence 8888876 788774321 13678888899883 45 7777774
No 147
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=79.90 E-value=12 Score=38.91 Aligned_cols=134 Identities=14% Similarity=0.194 Sum_probs=85.2
Q ss_pred CCccccCC---chhHHHHHHHHHHHHHH----------hCC-------CCCCCCCceEEEeCcchhHHHHHHHHHHHHHH
Q 007456 289 FCMFNDDI---QGTAGVALAGLLGTVRA----------QGL-------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAAR 348 (603)
Q Consensus 289 ~~~FnDDi---QGTaaV~lAgll~A~r~----------tg~-------~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~ 348 (603)
+.+.|--- +.+|=-+++-+|+..|- .|. .-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 94 I~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~--- 170 (343)
T 2yq5_A 94 LLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM--- 170 (343)
T ss_dssp CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC---
Confidence 55555422 34555668888877761 221 12345559999999999999999988653
Q ss_pred hcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC----CCCCCCH
Q 007456 349 MAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNE 424 (603)
Q Consensus 349 ~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~ 424 (603)
|+ +++.+|+..- +.....+ ...+|.|+++. .|+++=.-- ..+.|++
T Consensus 171 --G~-------~V~~~d~~~~---------~~~~~~~----------~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~ 220 (343)
T 2yq5_A 171 --GA-------KVIAYDVAYN---------PEFEPFL----------TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGE 220 (343)
T ss_dssp --TC-------EEEEECSSCC---------GGGTTTC----------EECCHHHHHHH--CSEEEECCCCCTTTTTCBCH
T ss_pred --CC-------EEEEECCChh---------hhhhccc----------cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhH
Confidence 54 6888888521 0000000 12379999987 798884422 2488999
Q ss_pred HHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007456 425 EVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 459 (603)
Q Consensus 425 evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~ 459 (603)
+.++.|. +..++.=.|.-..--|---.+|++
T Consensus 221 ~~l~~mk----~gailIN~aRg~~vd~~aL~~aL~ 251 (343)
T 2yq5_A 221 KQLKEMK----KSAYLINCARGELVDTGALIKALQ 251 (343)
T ss_dssp HHHHHSC----TTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhhCC----CCcEEEECCCChhhhHHHHHHHHH
Confidence 9999993 678888888754433333334443
No 148
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=79.86 E-value=9.9 Score=38.73 Aligned_cols=210 Identities=21% Similarity=0.218 Sum_probs=114.7
Q ss_pred CCCe-EEEeecCCCchHHHHHHHHhh-cCCccccCC---chhHHHHHHHHHHHHHHh---------C-----C----CCC
Q 007456 263 WPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G-----L----SLT 319 (603)
Q Consensus 263 ~P~~-~Iq~EDf~~~naf~iL~ryr~-~~~~FnDDi---QGTaaV~lAgll~A~r~t---------g-----~----~l~ 319 (603)
.|+. .|+.--.+..|- . ++..++ -+.+.|--- +.+|=-+++.+|+..|-. | . .-.
T Consensus 63 ~~~Lk~i~~~~~G~d~i-d-~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~ 140 (311)
T 2cuk_A 63 AKGLKVIACYSVGVDHV-D-LEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGL 140 (311)
T ss_dssp STTCCEEECSSSCCTTB-C-HHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBC
T ss_pred CCCCeEEEECCcCcccc-C-HHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCc
Confidence 4555 565544444442 1 222333 366666432 234445788888876632 1 0 013
Q ss_pred CCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCC
Q 007456 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (603)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 399 (603)
+|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. .. +. ..+
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~~--~~------~~----------~~~ 186 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAF-----GM-------RVVYHARTP----KP--LP------YP----------FLS 186 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----CS--SS------SC----------BCC
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHC-----CC-------EEEEECCCC----cc--cc------cc----------cCC
Confidence 45569999999999999999987653 43 688888752 11 11 10 246
Q ss_pred HHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCC-C-
Q 007456 400 LLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSP-F- 473 (603)
Q Consensus 400 L~e~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSP-f- 473 (603)
|.|+++. .|+++=.- ...+.++++.++.|. +..++.=.|.-..--|..-.+|++ |+.--| |.- |
T Consensus 187 l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk----~ga~lin~srg~~vd~~aL~~aL~---g~i~ga-~lDv~~ 256 (311)
T 2cuk_A 187 LEELLKE--ADVVSLHTPLTPETHRLLNRERLFAMK----RGAILLNTARGALVDTEALVEALR---GHLFGA-GLDVTD 256 (311)
T ss_dssp HHHHHHH--CSEEEECCCCCTTTTTCBCHHHHTTSC----TTCEEEECSCGGGBCHHHHHHHHT---TTSSEE-EESSCS
T ss_pred HHHHHhh--CCEEEEeCCCChHHHhhcCHHHHhhCC----CCcEEEECCCCCccCHHHHHHHHh---CcCCEE-EEeeCC
Confidence 8898887 79887542 234788888888883 577888888744322322334443 331111 110 1
Q ss_pred -CceecCCCeeeccccccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCC
Q 007456 474 -ENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMT 527 (603)
Q Consensus 474 -~pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~ 527 (603)
+|..- .. .-=+..|+.+-|=++-. ...--..|...+++.|.....
T Consensus 257 ~eP~~~--~~--~L~~~~nviltPh~~~~-----t~~~~~~~~~~~~~nl~~~~~ 302 (311)
T 2cuk_A 257 PEPLPP--GH--PLYALPNAVITPHIGSA-----GRTTRERMAEVAVENLLAVLE 302 (311)
T ss_dssp SSSCCT--TS--GGGGCTTEEECCSCTTC-----BHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCC--CC--hhhhCCCEEECCcCCCC-----CHHHHHHHHHHHHHHHHHHHc
Confidence 11110 01 11234578888866522 111224566666666666554
No 149
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=79.70 E-value=1.9 Score=42.34 Aligned_cols=97 Identities=11% Similarity=0.011 Sum_probs=55.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.||.|+|+|..|..+|..+... |.. .+++++|++.- .+.. +.+.... .....++.|+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-----g~~-----~~V~~~d~~~~------~~~~----~~~~g~~---~~~~~~~~~~ 63 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-----HPH-----YKIVGYNRSDR------SRDI----ALERGIV---DEATADFKVF 63 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CTT-----SEEEEECSSHH------HHHH----HHHTTSC---SEEESCTTTT
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-----CCC-----cEEEEEcCCHH------HHHH----HHHcCCc---ccccCCHHHh
Confidence 6899999999999999988653 211 36888886410 0111 1110000 0012345566
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhc-CCCCCeEEecCCCC
Q 007456 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRES-DSVKPAIFAMSNPT 447 (603)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~M~~~-~~erPIIF~LSNPt 447 (603)
++. +|++| ++..+... +++++.+... ..+..||.-+||-.
T Consensus 64 ~~~--aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~ 104 (290)
T 3b1f_A 64 AAL--ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGSTK 104 (290)
T ss_dssp GGG--CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCH
T ss_pred hcC--CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCc
Confidence 665 68777 44333433 7888887542 34566777677643
No 150
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=79.45 E-value=0.99 Score=46.92 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=29.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||+|+|+|..|.-||+.|+.+.+ ++|.++|.+
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~Gv-----------g~itlvD~d 69 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILAGV-----------KGLTMLDHE 69 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----------SEEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC-----------CEEEEEECC
Confidence 999999999999999999988744 689999976
No 151
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=79.41 E-value=1.6 Score=43.01 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=25.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 4899999999999999887653 42 57888764
No 152
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=79.30 E-value=6.1 Score=40.59 Aligned_cols=142 Identities=17% Similarity=0.129 Sum_probs=88.7
Q ss_pred EEEeecCCCchHHHHHHHHh-hcCCccccCCc---hhHHHHHHHHHHHHHH---------hCC-------CCCCCCCceE
Q 007456 267 IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRA---------QGL-------SLTDFADQKI 326 (603)
Q Consensus 267 ~Iq~EDf~~~naf~iL~ryr-~~~~~FnDDiQ---GTaaV~lAgll~A~r~---------tg~-------~l~dl~~~ri 326 (603)
.|+.--.+..|- . ++..+ .-+.+.|---. .+|=-+++.+|+..|- .|. .-.+|.+.+|
T Consensus 72 ~I~~~~~G~d~i-d-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~v 149 (331)
T 1xdw_A 72 YILTRTAGTDHI-D-KEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTV 149 (331)
T ss_dssp EEEESSSCCTTB-C-HHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEE
T ss_pred EEEEcccccccc-C-HHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEE
Confidence 666666655552 1 22223 33666664332 3455578888887761 111 1134556999
Q ss_pred EEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcc
Q 007456 327 VVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRK 406 (603)
Q Consensus 327 v~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~ 406 (603)
.|+|.|..|..+|+.+... |+ +++.+|+.. . ..+. .++ ...+|.|+++.
T Consensus 150 gIiG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~-~~~~----~~~----------~~~~l~ell~~ 198 (331)
T 1xdw_A 150 GVVGLGRIGRVAAQIFHGM-----GA-------TVIGEDVFE----I-KGIE----DYC----------TQVSLDEVLEK 198 (331)
T ss_dssp EEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----C-CSCT----TTC----------EECCHHHHHHH
T ss_pred EEECcCHHHHHHHHHHHHC-----CC-------EEEEECCCc----c-HHHH----hcc----------ccCCHHHHHhh
Confidence 9999999999999988653 43 588888752 1 1111 111 12368999887
Q ss_pred cCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007456 407 VKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (603)
Q Consensus 407 vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt 447 (603)
.|+++=.- ...+.++++.++.|. +..++.=.|.-.
T Consensus 199 --aDvV~~~~p~t~~t~~li~~~~l~~mk----~ga~lin~srg~ 237 (331)
T 1xdw_A 199 --SDIITIHAPYIKENGAVVTRDFLKKMK----DGAILVNCARGQ 237 (331)
T ss_dssp --CSEEEECCCCCTTTCCSBCHHHHHTSC----TTEEEEECSCGG
T ss_pred --CCEEEEecCCchHHHHHhCHHHHhhCC----CCcEEEECCCcc
Confidence 79888531 234889999999993 567888888543
No 153
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=79.30 E-value=1.2 Score=45.19 Aligned_cols=103 Identities=16% Similarity=0.122 Sum_probs=58.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|+|+.|..+|..|..+ |. +++++|+.--+..-+ ..+.... +........ ....++.+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~-----g~-------~V~~~~r~~~~~~~~~~g~~~~~-~~~~~~~~~---~~~~~~~~ 67 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA-----GE-------AINVLARGATLQALQTAGLRLTE-DGATHTLPV---RATHDAAA 67 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT-----TC-------CEEEECCHHHHHHHHHTCEEEEE-TTEEEEECC---EEESCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEChHHHHHHHHCCCEEec-CCCeEEEee---eEECCHHH
Confidence 7899999999999999888663 42 578888631100000 0010000 000000000 01235665
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCC
Q 007456 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPT 447 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt 447 (603)
++. +|++| ++. +....+++++.++....+..+|..++|.-
T Consensus 68 -~~~--~D~Vi-lav-k~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 68 -LGE--QDVVI-VAV-KAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp -HCC--CSEEE-ECC-CHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred -cCC--CCEEE-EeC-CchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 443 78877 443 33467888888864345677999999994
No 154
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=78.92 E-value=1.6 Score=44.71 Aligned_cols=104 Identities=15% Similarity=0.164 Sum_probs=63.1
Q ss_pred ceEEEeC-cchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccC--CcCCcccCCCH
Q 007456 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPG--DFMGLREGASL 400 (603)
Q Consensus 324 ~riv~~G-AGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~--~~~~~~~~~~L 400 (603)
.||+|+| +|..|..++..|.. .|+- ..++++|.+.- ......+.+... .+.......++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~~-----~ev~l~Di~~~--------~~~~~dL~~~~~~~~v~~~~~t~d~ 70 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPLV-----SVLHLYDVVNA--------PGVTADISHMDTGAVVRGFLGQQQL 70 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTTE-----EEEEEEESSSH--------HHHHHHHHTSCSSCEEEEEESHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCC-----CEEEEEeCCCc--------HhHHHHhhcccccceEEEEeCCCCH
Confidence 6899999 79999998877643 3431 46999996421 000001111000 00000012368
Q ss_pred HHHhcccCCcEEEeecCCC---C-----------CCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 401 LEVVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g-----------~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
.+++++ .|++|=+.+.+ | ..++++++.|.+ ++.+.+|+--|||..
T Consensus 71 ~~al~g--aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~-~~p~~~viv~SNPv~ 129 (326)
T 1smk_A 71 EAALTG--MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAK-CCPRAIVNLISNPVN 129 (326)
T ss_dssp HHHHTT--CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHH
T ss_pred HHHcCC--CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEECCchH
Confidence 889988 69887554433 3 246678888854 778889999999986
No 155
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=78.28 E-value=2.7 Score=41.86 Aligned_cols=32 Identities=22% Similarity=0.455 Sum_probs=25.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-----GH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 6899999999999999887653 43 57888764
No 156
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=78.17 E-value=2.6 Score=42.90 Aligned_cols=105 Identities=18% Similarity=0.282 Sum_probs=59.2
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
||.|+|||+.|.++|..+... |.. ..++++|.+-=-.+. ..++.+. .++.... .. ...+ .++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~~-----~~V~l~D~~~~~~~~~~~~l~~~-~~~~~~~-~i----~~~d-~~~ 64 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GFA-----REMVLIDVDKKRAEGDALDLIHG-TPFTRRA-NI----YAGD-YAD 64 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSSHHHHHHHHHHHHHH-GGGSCCC-EE----EECC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeCChHHHHHHHHHHHhh-hhhcCCc-EE----EeCC-HHH
Confidence 799999999999998887653 431 379999975100000 0001110 0111110 00 0123 345
Q ss_pred hcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007456 404 VRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (603)
Q Consensus 404 V~~vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~~erPIIF~LSNPt~~ 449 (603)
++. .|++|=+-..+.. .-+++++.|.+ +++.-+|+-.|||...
T Consensus 65 ~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 65 LKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSK-YAPDSIVIVVTNPVDV 121 (319)
T ss_dssp GTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHHH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEeCCcHHH
Confidence 655 7887744333321 12688888854 6777788889999874
No 157
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=77.64 E-value=1.9 Score=42.50 Aligned_cols=93 Identities=10% Similarity=0.114 Sum_probs=56.4
Q ss_pred ceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|+ |..|..+|..+.. .|. +++++|++- +.+. .+....- ...++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~~------~~~~----~~~~~g~------~~~~~~~ 63 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIAP------EGRD----RLQGMGI------PLTDGDG 63 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCSH------HHHH----HHHHTTC------CCCCSSG
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECCH------HHHH----HHHhcCC------CcCCHHH
Confidence 48999999 9999999998865 343 688888641 0111 1111100 0124556
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
+++. +|++| ++..+.. .+++++.+.....+..||.-+|+..+
T Consensus 64 ~~~~--aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 64 WIDE--ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAAAP 105 (286)
T ss_dssp GGGT--CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSHHH
T ss_pred HhcC--CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCCch
Confidence 6665 78877 3333333 58888887543345667777888654
No 158
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=77.55 E-value=2.1 Score=42.73 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=25.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 47 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR 47 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 6899999999999999887653 43 57778864
No 159
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=77.27 E-value=7.7 Score=39.79 Aligned_cols=148 Identities=20% Similarity=0.203 Sum_probs=92.0
Q ss_pred HhCCCe-EEEeecCCCchHHHHHHHHh-hcCCccccCCc---hhHHHHHHHHHHHHHHh-----------------CC-C
Q 007456 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRAQ-----------------GL-S 317 (603)
Q Consensus 261 ~~~P~~-~Iq~EDf~~~naf~iL~ryr-~~~~~FnDDiQ---GTaaV~lAgll~A~r~t-----------------g~-~ 317 (603)
...|+. .|+.--.+..|- . ++..+ .-+.+.|---- .+|=-+++.+|+..|-. +. +
T Consensus 63 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~ 140 (334)
T 2dbq_A 63 ENAPKLRIVANYAVGYDNI-D-IEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHP 140 (334)
T ss_dssp HTCTTCCEEEESSSCCTTB-C-HHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCT
T ss_pred hhCCCceEEEECCcccccc-c-HHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccccccc
Confidence 346877 788777776662 2 23333 34777775433 34444788899887732 10 0
Q ss_pred ----CCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCC
Q 007456 318 ----LTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMG 393 (603)
Q Consensus 318 ----l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~ 393 (603)
-.+|.+.+|.|+|.|..|..+|..+... |. +++.+|+..- . .....+ ..
T Consensus 141 ~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~-----G~-------~V~~~d~~~~------~--~~~~~~---g~---- 193 (334)
T 2dbq_A 141 KWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGF-----NM-------RILYYSRTRK------E--EVEREL---NA---- 193 (334)
T ss_dssp TTTCCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSCC------H--HHHHHH---CC----
T ss_pred ccccccCCCCCEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEECCCcc------h--hhHhhc---Cc----
Confidence 1345559999999999999999988653 43 6888887421 0 100011 00
Q ss_pred cccCCCHHHHhcccCCcEEEeec-CC---CCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007456 394 LREGASLLEVVRKVKPHVLLGLS-GV---GGVFNEEVLKAMRESDSVKPAIFAMSN 445 (603)
Q Consensus 394 ~~~~~~L~e~V~~vkptvLIG~S-~~---~g~Ft~evv~~M~~~~~erPIIF~LSN 445 (603)
...+|.|+++. .|+++=+- .. .+.+++++++.|. +..+|.-.|.
T Consensus 194 --~~~~l~~~l~~--aDvVil~vp~~~~t~~~i~~~~~~~mk----~~ailIn~sr 241 (334)
T 2dbq_A 194 --EFKPLEDLLRE--SDFVVLAVPLTRETYHLINEERLKLMK----KTAILINIAR 241 (334)
T ss_dssp --EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC----TTCEEEECSC
T ss_pred --ccCCHHHHHhh--CCEEEECCCCChHHHHhhCHHHHhcCC----CCcEEEECCC
Confidence 12368898887 78876432 22 2678888888883 4667777775
No 160
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=77.07 E-value=1.6 Score=44.57 Aligned_cols=115 Identities=21% Similarity=0.300 Sum_probs=67.5
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
||.|+|||+.|.++|..|... |+- ..+.++|.+-=..++ ..+|.+...+|-.+. .+ ....+ .++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~~-----~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~-~i---~~t~d-~~a 66 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LDV-----DEIALVDIAEDLAVGEAMDLAHAAAGIDKYP-KI---VGGAD-YSL 66 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SCC-----SEEEEECSSHHHHHHHHHHHHHHHHTTTCCC-EE---EEESC-GGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECChHHHHHHHHHHHhhhhhcCCCC-EE---EEeCC-HHH
Confidence 799999999999999887553 431 379999975311110 001222222221111 11 11234 778
Q ss_pred hcccCCcEEEeecCC---CCC-----C--C----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007456 404 VRKVKPHVLLGLSGV---GGV-----F--N----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (603)
Q Consensus 404 V~~vkptvLIG~S~~---~g~-----F--t----~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~w 460 (603)
+++ .|++|=+.+. +|- | | +++++.|. ++++.-+|+-.|||.. ...+-+++.
T Consensus 67 ~~~--aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~-~~~p~a~iivvsNPvd---~~t~~~~k~ 131 (294)
T 1oju_A 67 LKG--SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIV-ENAPESKILVVTNPMD---VMTYIMWKE 131 (294)
T ss_dssp GTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHH-TTSTTCEEEECSSSHH---HHHHHHHHH
T ss_pred hCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHH-hhCCCeEEEEeCCcch---HHHHHHHHh
Confidence 887 6887644333 342 1 2 45666775 4899999999999986 344555543
No 161
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=76.99 E-value=1 Score=45.99 Aligned_cols=114 Identities=17% Similarity=0.281 Sum_probs=64.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||..|.++|..+.. .|+- ..|+++|.+--..+.. .++.+. .++...... -..+..+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~-----~~~~-----~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~-----i~~~~~~ 70 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMN-----QGIA-----DEIVLIDANESKAIGDAMDFNHG-KVFAPKPVD-----IWHGDYD 70 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTCC-----SEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCE-----EEECCGG
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCCC-----CEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeE-----EEcCcHH
Confidence 689999999999999876643 2442 4799999862111100 012211 111110000 0112346
Q ss_pred HhcccCCcEEEeecCCC---C-----------CCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007456 403 VVRKVKPHVLLGLSGVG---G-----------VFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 459 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g-----------~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~ 459 (603)
+++. .|++|=+.+.+ | ...+++++.|.+ +++.-++|-.|||.. ...+-+++
T Consensus 71 al~~--aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~~iv~tNPv~---~~~~~~~~ 135 (316)
T 1ldn_A 71 DCRD--ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMA-SGFQGLFLVATNPVD---ILTYATWK 135 (316)
T ss_dssp GTTT--CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHH-HTCCSEEEECSSSHH---HHHHHHHH
T ss_pred HhCC--CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHH-HCCCCEEEEeCCchH---HHHHHHHH
Confidence 6766 68887443333 2 234567777754 777778888899986 33444444
No 162
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=76.93 E-value=10 Score=39.16 Aligned_cols=220 Identities=13% Similarity=0.178 Sum_probs=122.0
Q ss_pred HhCCCe-EEEeecCCCchHHHHHHHHhh-cCCccccCC---chhHHHHHHHHHHHHHHh----------C----C-CCCC
Q 007456 261 ARWPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDI---QGTAGVALAGLLGTVRAQ----------G----L-SLTD 320 (603)
Q Consensus 261 ~~~P~~-~Iq~EDf~~~naf~iL~ryr~-~~~~FnDDi---QGTaaV~lAgll~A~r~t----------g----~-~l~d 320 (603)
...|+. .|+.-=.+..|- . ++..++ -+++.|--- +.+|=-+++.+|+..|-. | . .-.+
T Consensus 57 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~ 134 (324)
T 3evt_A 57 RPTNQLKFVQVISAGVDYL-P-LKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTST 134 (324)
T ss_dssp STTCCCCEEECSSSCCTTS-C-HHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCC
T ss_pred hhCCCceEEEECCcccccc-C-HHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCcc
Confidence 456776 777666665542 2 233333 477777653 334445678888776521 0 0 1234
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCH
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 400 (603)
|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+..-- .+.+.. .+ ...+|
T Consensus 135 l~gktvGIiGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~~~---~~~~~~---~~-----------~~~~l 185 (324)
T 3evt_A 135 LTGQQLLIYGTGQIGQSLAAKASAL-----GM-------HVIGVNTTGHP---ADHFHE---TV-----------AFTAT 185 (324)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSCCC---CTTCSE---EE-----------EGGGC
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhC-----CC-------EEEEECCCcch---hHhHhh---cc-----------ccCCH
Confidence 5559999999999999999988653 54 68888875311 011110 01 12468
Q ss_pred HHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCce
Q 007456 401 LEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENV 476 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv 476 (603)
.|+++. .|+++=.- ...+.|+++.+..|. +..++.=.|.-..--|-.-.+|++ +|+.-.|.=-=|.+-
T Consensus 186 ~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~mk----~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~E 257 (324)
T 3evt_A 186 ADALAT--ANFIVNALPLTPTTHHLFSTELFQQTK----QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPE 257 (324)
T ss_dssp HHHHHH--CSEEEECCCCCGGGTTCBSHHHHHTCC----SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSS
T ss_pred HHHHhh--CCEEEEcCCCchHHHHhcCHHHHhcCC----CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCC
Confidence 888887 78887431 124889999999993 577888888755433433444543 455332211111110
Q ss_pred ecCCCeeeccccccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccC
Q 007456 477 DLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYM 526 (603)
Q Consensus 477 ~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v 526 (603)
..+.. ..--+..|+.+-|=+|- ....-.+.|...+++-|....
T Consensus 258 Pl~~~--~pL~~~~nvilTPHia~-----~t~~~~~~~~~~~~~nl~~~l 300 (324)
T 3evt_A 258 PLPTD--HPLWQRDDVLITPHISG-----QIAHFRATVFPIFAANFAQFV 300 (324)
T ss_dssp SCCTT--CGGGGCSSEEECCSCTT-----CCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCC--ChhhcCCCEEEcCcccc-----ChHHHHHHHHHHHHHHHHHHH
Confidence 00000 01123457777776542 112223555555666655554
No 163
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=76.92 E-value=2.1 Score=46.46 Aligned_cols=36 Identities=8% Similarity=-0.179 Sum_probs=26.9
Q ss_pred ccccccccccchhhHHHHHHhCCcccCHHHHHHHHH
Q 007456 485 HVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAE 520 (603)
Q Consensus 485 ~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~ 520 (603)
.||+.-|-+++|.+.=++.++...-++.+.+..|.+
T Consensus 232 ~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 232 CKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 588888989999888888777333377777777654
No 164
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=76.81 E-value=11 Score=38.70 Aligned_cols=161 Identities=16% Similarity=0.167 Sum_probs=94.2
Q ss_pred EEEeecCCCchHHHHHHHHh-hcCCccccCCc---hhHHHHHHHHHHHHHH----------------hCCCCCCCCCceE
Q 007456 267 IVQFEDFQMKWAFETLERYR-KRFCMFNDDIQ---GTAGVALAGLLGTVRA----------------QGLSLTDFADQKI 326 (603)
Q Consensus 267 ~Iq~EDf~~~naf~iL~ryr-~~~~~FnDDiQ---GTaaV~lAgll~A~r~----------------tg~~l~dl~~~ri 326 (603)
.|+.--.+..|- . ++..+ .-+.+.|---. .+|=-+++.+|+..|- .+..-.+|.+.++
T Consensus 71 ~I~~~~~G~d~i-d-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~v 148 (333)
T 1dxy_A 71 FLTIRNVGTDNI-D-MTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTV 148 (333)
T ss_dssp EEEESSSCCTTB-C-HHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEE
T ss_pred EEEEcCcccCcc-C-HHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEE
Confidence 555444444442 1 22222 33666664322 3444578888887651 1111234555999
Q ss_pred EEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcc
Q 007456 327 VVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRK 406 (603)
Q Consensus 327 v~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~ 406 (603)
.|+|.|..|..+|+.+... |+ +++.+|+..- .... .++ ...+|.|+++.
T Consensus 149 gIiG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~~-----~~~~----~~~----------~~~~l~ell~~ 197 (333)
T 1dxy_A 149 GVMGTGHIGQVAIKLFKGF-----GA-------KVIAYDPYPM-----KGDH----PDF----------DYVSLEDLFKQ 197 (333)
T ss_dssp EEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSCC-----SSCC----TTC----------EECCHHHHHHH
T ss_pred EEECcCHHHHHHHHHHHHC-----CC-------EEEEECCCcc-----hhhH----hcc----------ccCCHHHHHhc
Confidence 9999999999999988653 43 6888887531 1111 111 12368899887
Q ss_pred cCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007456 407 VKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 468 (603)
Q Consensus 407 vkptvLIG~S~----~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~A 468 (603)
.|+++=.-- ..+.|+++.++.|. +..++.=.|.-..--|-.-.+|++ +|+.--|
T Consensus 198 --aDvV~~~~P~~~~t~~li~~~~l~~mk----~ga~lIn~srg~~vd~~aL~~aL~--~g~i~gA 255 (333)
T 1dxy_A 198 --SDVIDLHVPGIEQNTHIINEAAFNLMK----PGAIVINTARPNLIDTQAMLSNLK--SGKLAGV 255 (333)
T ss_dssp --CSEEEECCCCCGGGTTSBCHHHHHHSC----TTEEEEECSCTTSBCHHHHHHHHH--TTSEEEE
T ss_pred --CCEEEEcCCCchhHHHHhCHHHHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCccEE
Confidence 788874421 23789999999993 567888888755433333334443 4554433
No 165
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=76.81 E-value=11 Score=38.76 Aligned_cols=143 Identities=17% Similarity=0.090 Sum_probs=87.9
Q ss_pred cCCccccCCc---hhHHHHHHHHHHHHHHh---------C------CCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHh
Q 007456 288 RFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------G------LSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARM 349 (603)
Q Consensus 288 ~~~~FnDDiQ---GTaaV~lAgll~A~r~t---------g------~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~ 349 (603)
-+.+.|---- .+|=-+++.+|+..|-. | ..-.+|.+.+|.|+|.|..|..+|+.+...
T Consensus 93 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~---- 168 (333)
T 1j4a_A 93 GFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF---- 168 (333)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT----
T ss_pred CCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 3666664332 34445788888887721 1 111345569999999999999999988653
Q ss_pred cCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC----CCCCCCHH
Q 007456 350 AGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVFNEE 425 (603)
Q Consensus 350 ~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~Ft~e 425 (603)
|+ +++.+|+..- ...+ .+++. ..+|.|+++. .|+++=.-. ..+.++++
T Consensus 169 -G~-------~V~~~d~~~~--------~~~~-~~~~~---------~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~ 220 (333)
T 1j4a_A 169 -GA-------KVITYDIFRN--------PELE-KKGYY---------VDSLDDLYKQ--ADVISLHVPDVPANVHMINDE 220 (333)
T ss_dssp -TC-------EEEEECSSCC--------HHHH-HTTCB---------CSCHHHHHHH--CSEEEECSCCCGGGTTCBSHH
T ss_pred -CC-------EEEEECCCcc--------hhHH-hhCee---------cCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHH
Confidence 44 6888887420 0011 12111 1368899886 688874421 23779999
Q ss_pred HHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007456 426 VLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 468 (603)
Q Consensus 426 vv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~A 468 (603)
.++.|. +..++.-.|.-..--|-.-.+|++ +|+.--|
T Consensus 221 ~l~~mk----~ga~lIn~arg~~vd~~aL~~aL~--~g~i~gA 257 (333)
T 1j4a_A 221 SIAKMK----QDVVIVNVSRGPLVDTDAVIRGLD--SGKIFGY 257 (333)
T ss_dssp HHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE
T ss_pred HHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCceEE
Confidence 999993 567888888754433433344444 4554433
No 166
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=76.79 E-value=5.2 Score=40.67 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=27.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|..+|..+... |.. .+|+++|++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~~-----~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GFK-----GKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TCC-----SEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CCC-----CEEEEEECC
Confidence 7999999999999999888653 542 378888874
No 167
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=76.65 E-value=1.8 Score=43.46 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=57.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCC--cCCcccCCCHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGD--FMGLREGASLL 401 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~--~~~~~~~~~L~ 401 (603)
.||.|+|||+-|..+|..|... | .+++++|+.-+ + .+...-..+...... +....-..++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~--~---~i~~~g~~~~~~~g~~~~~~~~~~~~~~ 65 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY--E---AIAGNGLKVFSINGDFTLPHVKGYRAPE 65 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH--H---HHHHTCEEEEETTCCEEESCCCEESCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH--H---HHHhCCCEEEcCCCeEEEeeceeecCHH
Confidence 6899999999999999888653 4 25888887531 1 011000000000000 00000123454
Q ss_pred HHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 402 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
+ ++ .+|++| ++. +.-..+++++.++....+..+|..+.|--.
T Consensus 66 ~-~~--~~D~vi-lav-k~~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 66 E-IG--PMDLVL-VGL-KTFANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp H-HC--CCSEEE-ECC-CGGGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred H-cC--CCCEEE-Eec-CCCCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 4 44 368777 554 333456888888654556778888999764
No 168
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=76.58 E-value=11 Score=38.89 Aligned_cols=168 Identities=14% Similarity=0.142 Sum_probs=101.5
Q ss_pred HhCCCe-EEEeecCCCchHHHHHHHHh-hcCCcccc-CC--chhHHHHHHHHHHHHHHh---------C-------CCCC
Q 007456 261 ARWPKA-IVQFEDFQMKWAFETLERYR-KRFCMFND-DI--QGTAGVALAGLLGTVRAQ---------G-------LSLT 319 (603)
Q Consensus 261 ~~~P~~-~Iq~EDf~~~naf~iL~ryr-~~~~~FnD-Di--QGTaaV~lAgll~A~r~t---------g-------~~l~ 319 (603)
...|+. .|+.--.+..|- . ++..+ .-+.+.|- +. ..+|=-+++-+|+..|-. | ..-.
T Consensus 60 ~~~~~Lk~I~~~~~G~d~i-d-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~ 137 (334)
T 2pi1_A 60 SKMPRLKLIHTRSVGFDHI-D-LDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILAR 137 (334)
T ss_dssp TTCTTCCEEEESSSCCTTB-C-HHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBC
T ss_pred hhCCCCeEEEECCcccccc-C-HHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccce
Confidence 345665 666666665542 2 22332 33666664 22 235556788888877621 1 0112
Q ss_pred CCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCC
Q 007456 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (603)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 399 (603)
+|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|+.. ..... .... ...+
T Consensus 138 ~l~g~tvgIiG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~~---------~~~~~---~~g~------~~~~ 187 (334)
T 2pi1_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVVK---------REDLK---EKGC------VYTS 187 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC---------CHHHH---HTTC------EECC
T ss_pred eccCceEEEECcCHHHHHHHHHHHHC-----cC-------EEEEECCCc---------chhhH---hcCc------eecC
Confidence 45559999999999999999988754 44 688888752 11110 1000 1245
Q ss_pred HHHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007456 400 LLEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 468 (603)
Q Consensus 400 L~e~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~A 468 (603)
|.|+++. .|+++=.- ...+.|+++.++.|. +..|+.=.|.-..--|-.-.+|++ +|+.-.|
T Consensus 188 l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA 252 (334)
T 2pi1_A 188 LDELLKE--SDVISLHVPYTKETHHMINEERISLMK----DGVYLINTARGKVVDTDALYRAYQ--RGKFSGL 252 (334)
T ss_dssp HHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--TTCEEEE
T ss_pred HHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhhCC----CCcEEEECCCCcccCHHHHHHHHH--hCCceEE
Confidence 9999987 79887431 234789999999993 577888888755433444445544 5655443
No 169
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=76.48 E-value=1.3 Score=44.17 Aligned_cols=32 Identities=28% Similarity=0.465 Sum_probs=26.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|.++|..|... |. +++++|++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999988764 43 57778864
No 170
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=76.31 E-value=3.8 Score=42.42 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=66.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||..|..+|..|+.. |+- ..+.++|..-=..++- .+|.+.. +|..+.. -..+..+
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~-----~~~-----~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~------i~~~~~~ 72 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ-----GIA-----QEIGIVDIFKDKTKGDAIDLEDAL-PFTSPKK------IYSAEYS 72 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHTTG-GGSCCCE------EEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEeCChHHHHHHHhhHhhhh-hhcCCcE------EEECcHH
Confidence 7999999999999999887763 442 4799999731100000 0222221 2321110 0122345
Q ss_pred HhcccCCcEEEeecCCC---C-----CC------CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007456 403 VVRKVKPHVLLGLSGVG---G-----VF------NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g-----~F------t~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~w 460 (603)
++++ .|++|=+.+.+ | .| -+++++.|.+ +++..+|+-.|||.. +..+-+++.
T Consensus 73 a~~~--aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~-~~p~a~ilvvtNPvd---i~t~~~~k~ 138 (326)
T 3vku_A 73 DAKD--ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAANPVD---ILTYATWKL 138 (326)
T ss_dssp GGTT--CSEEEECCCCC----------------CHHHHHHHHHT-TTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhcC--CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEccCchH---HHHHHHHHh
Confidence 6666 68776343322 2 22 3577888854 899999999999986 444445443
No 171
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=76.19 E-value=1 Score=45.64 Aligned_cols=106 Identities=21% Similarity=0.260 Sum_probs=58.1
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCC-CCChhhhccccccCCcCCcccCCCHHHH
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERK-NLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~-~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
||.|+|||+.|.++|..+... ++ -.+++++|.+-=..+... ++.+....+... ... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~-~~i---~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVEGIPQGKALDMYESGPVGLFD-TKV---TGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSSSHHHHHHHHHHTTHHHHTCC-CEE---EEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHHHHHhHHhhhhcccCC-cEE---EECCCHHH-
Confidence 799999999999999886552 21 147999998621000000 011100001001 000 01134544
Q ss_pred hcccCCcEEEeecCCC---CC-------C----CHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 404 VRKVKPHVLLGLSGVG---GV-------F----NEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 404 V~~vkptvLIG~S~~~---g~-------F----t~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
++. .|++|=+-+.| |- . -+++++.|.+ +++.-+|+-+|||..
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~~~~~viv~tNP~~ 122 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMK-HSKNPIIIVVSNPLD 122 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCSSCEEEECCSSHH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEEcCchH
Confidence 666 68876443322 32 1 1566677754 678888888999986
No 172
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=76.18 E-value=1.6 Score=42.64 Aligned_cols=31 Identities=13% Similarity=0.305 Sum_probs=23.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|..+|..+.. |. +++++|++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 379999999999999887743 32 47777764
No 173
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=76.08 E-value=2.8 Score=43.69 Aligned_cols=121 Identities=19% Similarity=0.178 Sum_probs=66.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.||+|+|||.+|-.+|+.|.+. .++.++|++- + .+......+....-+. .+..+|.++
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~~----~--~a~~la~~~~~~~~d~---~~~~~l~~l 74 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVNN----E--NLEKVKEFATPLKVDA---SNFDKLVEV 74 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESCH----H--HHHHHTTTSEEEECCT---TCHHHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECCH----H--HHHHHHhhCCeEEEec---CCHHHHHHH
Confidence 8999999999999888877542 2588888741 1 1111111111000000 122468888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCce
Q 007456 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENV 476 (603)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv 476 (603)
+++ +|++|-+. |..+..+++++-.+ ..=.++-+|.-.+.++.--+.|.+ .|.. +..|+=|+|-
T Consensus 75 l~~--~DvVIn~~--P~~~~~~v~~a~l~---~G~~~vD~s~~~~~~~~l~~~Ak~--aG~~-~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGAL--PGFLGFKSIKAAIK---SKVDMVDVSFMPENPLELRDEAEK--AQVT-IVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECC--CHHHHHHHHHHHHH---TTCCEEECCCCSSCGGGGHHHHHH--TTCE-EECSCBTTTB
T ss_pred HhC--CCEEEECC--ChhhhHHHHHHHHH---hCCeEEEccCCcHHHHHHHHHHHH--cCCE-EEECCCCcch
Confidence 886 79999763 43456677665433 233466678632322222344433 4543 3466556664
No 174
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=76.06 E-value=2.5 Score=41.43 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=18.6
Q ss_pred ceEEEeCcchhHHHHHHHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQ 344 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~ 344 (603)
.||.|+|+|..|..+|..+..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~ 24 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR 24 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHh
Confidence 489999999999999988765
No 175
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=76.01 E-value=2 Score=43.76 Aligned_cols=114 Identities=18% Similarity=0.234 Sum_probs=64.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||+.|..++-+|+. .++- ..|+|+|.+-=-.++ ..+|.+. .+|.++. .. ...+ .+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~-----~~~~-----~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~-~v----~~~~-~~ 63 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALAL-----LGVA-----REVVLVDLDRKLAQAHAEDILHA-TPFAHPV-WV----WAGS-YG 63 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHHTT-GGGSCCC-EE----EECC-GG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHHHHHHHHHHHh-HhhcCCe-EE----EECC-HH
Confidence 389999999999998776544 2432 479999985200000 0012211 1222111 01 0122 56
Q ss_pred HhcccCCcEEEeecC---CCCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007456 403 VVRKVKPHVLLGLSG---VGGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (603)
Q Consensus 403 ~V~~vkptvLIG~S~---~~g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~w 460 (603)
+++. .|++|=+.+ .+|- .-+++++.|.+ ++..-+|+-.|||.. ...+-+++.
T Consensus 64 a~~~--aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~---~~t~~~~k~ 129 (310)
T 2xxj_A 64 DLEG--ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLE-AAPEAVLLVATNPVD---VMTQVAYAL 129 (310)
T ss_dssp GGTT--EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEecCchH---HHHHHHHHH
Confidence 6777 688874433 3342 12456666644 788999999999986 344445453
No 176
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=75.86 E-value=1.6 Score=43.72 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=25.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
-||+|+|||.||+..|-.|.. .|+ ++.++|++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 589999999999999988765 465 47777764
No 177
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=75.59 E-value=0.85 Score=49.33 Aligned_cols=103 Identities=15% Similarity=0.125 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHhCCCeEEEeecCCCchHHHHHHHHhhc-CCcc--ccCCchhHHHHHHHHHHHHHHhCC-----CCCCCC
Q 007456 251 IVDEFMEAVHARWPKAIVQFEDFQMKWAFETLERYRKR-FCMF--NDDIQGTAGVALAGLLGTVRAQGL-----SLTDFA 322 (603)
Q Consensus 251 ~vdefv~av~~~~P~~~Iq~EDf~~~naf~iL~ryr~~-~~~F--nDDiQGTaaV~lAgll~A~r~tg~-----~l~dl~ 322 (603)
.+..+++.+...+|++-+.--|. ..-.++-++|.-+ +|++ |+..-+.|+....-|+..+..... ++.+-.
T Consensus 134 ~~~~~l~~~a~~~~~v~~~~vd~--~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 134 DVVQALNLMAVLNPRIKHTAIDG--GTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEET--TTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHHhHcCceEEEEEec--hhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 45566666666778653333343 3445677888643 5644 666666777666666665432210 011111
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
..+|+|+|||.||+..|..+.. .|+ ++.++|++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 2689999999999999988654 354 57777753
No 178
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=75.42 E-value=5.6 Score=35.87 Aligned_cols=73 Identities=30% Similarity=0.384 Sum_probs=41.1
Q ss_pred ceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.+|+|.|| |-.|..+++.|.+ .| .++++++++.--. ..+......+..- ++ .+..++.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~~~---~~~~~~~~~~~~~--D~---~~~~~~~~ 63 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSSRL---PSEGPRPAHVVVG--DV---LQAADVDK 63 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGGGS---CSSSCCCSEEEES--CT---TSHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChhhc---ccccCCceEEEEe--cC---CCHHHHHH
Confidence 78999998 7777777766654 34 2688888752110 1110111111111 11 12245788
Q ss_pred HhcccCCcEEEeecCC
Q 007456 403 VVRKVKPHVLLGLSGV 418 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~ 418 (603)
+++. +|++|=+.+.
T Consensus 64 ~~~~--~d~vi~~a~~ 77 (206)
T 1hdo_A 64 TVAG--QDAVIVLLGT 77 (206)
T ss_dssp HHTT--CSEEEECCCC
T ss_pred HHcC--CCEEEECccC
Confidence 8876 7999977764
No 179
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=75.17 E-value=1.7 Score=44.30 Aligned_cols=105 Identities=21% Similarity=0.350 Sum_probs=60.2
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
||.|+|||+.|.++|-.++.. |+ ..++|+|.+-=-.++. .+|.+...++..+ ... ....+. ++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~~~~~~g~~~dl~~~~~~~~~~-~~i---~~t~d~-~a 64 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIARTPGKPQGEALDLAHAAAELGVD-IRI---SGSNSY-ED 64 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSSTTHHHHHHHHHHHHHHHHTCC-CCE---EEESCG-GG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCChhhHHHHHHHHHHhhhhcCCC-eEE---EECCCH-HH
Confidence 689999999999999766542 55 2699999851000000 0121111111111 111 111344 67
Q ss_pred hcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 404 VRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 404 V~~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
++. .|++|=+.+.+ |- .-+++++.|.+ +++.-+|+-.|||..
T Consensus 65 ~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~iiv~tNPv~ 120 (308)
T 2d4a_B 65 MRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKA-YAKDAIVVITTNPVD 120 (308)
T ss_dssp GTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH
T ss_pred hCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEeCCchH
Confidence 777 79988554433 31 13577777754 778887777899986
No 180
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=75.07 E-value=1.8 Score=44.05 Aligned_cols=106 Identities=19% Similarity=0.192 Sum_probs=59.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||..|.++|..+.. .|+ + .++++|.+-=-.+.. .+|.+...+.... ..+ ....++ +
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~~~~~g~~~dl~~~~~~~~~~-~~i---~~t~d~-~ 66 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVEGVPQGKALDLYEASPIEGFD-VRV---TGTNNY-A 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSSSHHHHHHHHHHTTHHHHTCC-CCE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCccHHHHHHHhHHHhHhhcCCC-eEE---EECCCH-H
Confidence 589999999999999987744 353 1 399999751000000 0111111000001 000 112456 7
Q ss_pred HhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 403 VVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
+++. .|++|=+.+.| |- .-+++.+.+.+ +++.-+|+-.|||..
T Consensus 67 a~~~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~vi~~tNPv~ 123 (309)
T 1ur5_A 67 DTAN--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAP-LSPNAVIIMVNNPLD 123 (309)
T ss_dssp GGTT--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGG-GCTTCEEEECCSSHH
T ss_pred HHCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCeEEEEcCCchH
Confidence 7777 68887554333 31 22467777754 778888877899987
No 181
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=75.06 E-value=7.8 Score=40.10 Aligned_cols=111 Identities=16% Similarity=0.183 Sum_probs=67.4
Q ss_pred CCCCceEEEeCcchhHHHHHHHHH-HHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCC
Q 007456 320 DFADQKIVVVGAGSAGLGVLKMAV-QAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (603)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~-~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~ 398 (603)
+|.+.+|.|+|.|..|..+|+.+. . .|+ +|+.+|+..- .....+ .+ .. ....
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~-----~G~-------~V~~~d~~~~------~~~~~~-~~---g~-----~~~~ 212 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHG-----LGM-------KLVYYDVAPA------DAETEK-AL---GA-----ERVD 212 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHT-----TCC-------EEEEECSSCC------CHHHHH-HH---TC-----EECS
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHh-----cCC-------EEEEECCCCc------chhhHh-hc---Cc-----EEeC
Confidence 444599999999999999999886 3 253 6888887521 111111 00 00 0113
Q ss_pred CHHHHhcccCCcEEEeecC----CCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcE
Q 007456 399 SLLEVVRKVKPHVLLGLSG----VGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENI 465 (603)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~----~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Gra 465 (603)
+|.|+++. .|+++=.-- ..+.++++.++.|. +..||.-.|+-..--|-.-.+|++ +|+.
T Consensus 213 ~l~ell~~--aDvVil~vp~~~~t~~li~~~~l~~mk----~gailin~srg~~vd~~aL~~aL~--~~~i 275 (348)
T 2w2k_A 213 SLEELARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK----PGSRIVNTARGPVISQDALIAALK--SGKL 275 (348)
T ss_dssp SHHHHHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC----TTEEEEECSCGGGBCHHHHHHHHH--TTSE
T ss_pred CHHHHhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC----CCCEEEECCCCchhCHHHHHHHHH--hCCc
Confidence 68888887 788774321 23788999999883 466777776643322333344443 4553
No 182
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=74.64 E-value=3.1 Score=40.70 Aligned_cols=47 Identities=28% Similarity=0.508 Sum_probs=35.5
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.|++.+++-.+. ++.+ +++|+|+|.+|..+|..+.. .|. +++++|++
T Consensus 102 ~g~~~~l~~~~~---~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~ 148 (263)
T 2d5c_A 102 PGFLEALKAGGI---PLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT 148 (263)
T ss_dssp HHHHHHHHHTTC---CCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred HHHHHHHHHhCC---CCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 478888877665 4566 99999999999988887654 242 58888874
No 183
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=74.00 E-value=7.4 Score=41.33 Aligned_cols=219 Identities=15% Similarity=0.108 Sum_probs=113.8
Q ss_pred CCCe-EEEeecCCCchHHHHHHHHh-hcCCccccCC---chhHHHHHHHHHHHHHHh---------C--------CCCCC
Q 007456 263 WPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------G--------LSLTD 320 (603)
Q Consensus 263 ~P~~-~Iq~EDf~~~naf~iL~ryr-~~~~~FnDDi---QGTaaV~lAgll~A~r~t---------g--------~~l~d 320 (603)
.|+. +|+.--.+..|- .+ +..+ .-+.+.|--- +.+|=-+++-+|+..|-. | ....+
T Consensus 111 ~p~Lk~I~~~g~G~d~i-D~-~aa~~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~ 188 (393)
T 2nac_A 111 AKNLKLALTAGIGSDHV-DL-QSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYD 188 (393)
T ss_dssp CTTCCEEEESSSCCTTB-CH-HHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCC
T ss_pred CCCCcEEEEcCcccccc-CH-HHHhcCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCcc
Confidence 4555 555444444332 22 2222 2355555221 334555677777776521 0 01124
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCH
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 400 (603)
|.+.++.|+|.|..|..+|+.+... |+ +++.+|+... .. ..++... .....+|
T Consensus 189 l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~~~~--------~~---~~~~~~G----~~~~~~l 241 (393)
T 2nac_A 189 LEAMHVGTVAAGRIGLAVLRRLAPF-----DV-------HLHYTDRHRL--------PE---SVEKELN----LTWHATR 241 (393)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSSCC--------CH---HHHHHHT----CEECSSH
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEEcCCcc--------ch---hhHhhcC----ceecCCH
Confidence 4559999999999999999987643 43 5888886421 11 1111100 0012469
Q ss_pred HHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCC--
Q 007456 401 LEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFE-- 474 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~-- 474 (603)
.|+++. .|+++=.- ...+.|+++.++.|. +..+|.=.|.-..--|-.-.+|++ +|+.--|.--=|.
T Consensus 242 ~ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk----~gailIN~aRG~~vde~aL~~aL~--~g~i~gA~lDV~~~E 313 (393)
T 2nac_A 242 EDMYPV--CDVVTLNCPLHPETEHMINDETLKLFK----RGAYIVNTARGKLCDRDAVARALE--SGRLAGYAGDVWFPQ 313 (393)
T ss_dssp HHHGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--TTSEEEEEESCCSSS
T ss_pred HHHHhc--CCEEEEecCCchHHHHHhhHHHHhhCC----CCCEEEECCCchHhhHHHHHHHHH--cCCeeEEEEEecCCC
Confidence 999887 79887442 224789999999993 567888888643322322334443 5654333211111
Q ss_pred ceecCCCeeeccccccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCC
Q 007456 475 NVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMT 527 (603)
Q Consensus 475 pv~~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~ 527 (603)
|..- .. .--+..|+.+-|=++-....+ ...|...+++-|.....
T Consensus 314 P~~~--~~--pL~~~~nvilTPHia~~T~e~-----~~~~~~~~~~nl~~~~~ 357 (393)
T 2nac_A 314 PAPK--DH--PWRTMPYNGMTPHISGTTLTA-----QARYAAGTREILECFFE 357 (393)
T ss_dssp SCCT--TC--GGGTSTTBCCCCSCTTCSHHH-----HHHHHHHHHHHHHHHHH
T ss_pred CCCC--CC--hhHcCCCEEECCCCCcCcHHH-----HHHHHHHHHHHHHHHHc
Confidence 1100 11 112345788888765322211 23344455555555543
No 184
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=73.85 E-value=6.3 Score=40.77 Aligned_cols=131 Identities=14% Similarity=0.213 Sum_probs=87.0
Q ss_pred HHHHHHHHHhC--CCe---EEEeecCCCchHHHHHHHHhh--cCCccc--------cCCchhHHHHHHHHHHHHHHhCCC
Q 007456 253 DEFMEAVHARW--PKA---IVQFEDFQMKWAFETLERYRK--RFCMFN--------DDIQGTAGVALAGLLGTVRAQGLS 317 (603)
Q Consensus 253 defv~av~~~~--P~~---~Iq~EDf~~~naf~iL~ryr~--~~~~Fn--------DDiQGTaaV~lAgll~A~r~tg~~ 317 (603)
+|+++.+.++- |++ ++|+==.+.-+..++++.-.- .+=.|| ....+-.-+|-.|++--|+-.+.+
T Consensus 97 ~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDG~hp~N~G~L~~g~~~~~PcTp~gv~~lL~~~~i~ 176 (303)
T 4b4u_A 97 EQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMGEAAYGSATPAGIMTILKENNIE 176 (303)
T ss_dssp HHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGCTTCCCHHHHHHHHTTCCCCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccCcccccCccCcchHHHhcCCCCcccCccHHHHHHHHHHHCCC
Confidence 56666666654 543 777654555555555554321 121111 012234457788999999999998
Q ss_pred CCCCCCceEEEeCcc-hhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCccc
Q 007456 318 LTDFADQKIVVVGAG-SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE 396 (603)
Q Consensus 318 l~dl~~~riv~~GAG-sAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~ 396 (603)
++- .++|++|.+ -.|.-+|.||.. .|. .+.++.|+
T Consensus 177 l~G---k~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~----------------------------- 212 (303)
T 4b4u_A 177 IAG---KHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR----------------------------- 212 (303)
T ss_dssp CTT---CEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-----------------------------
T ss_pred CCC---CEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-----------------------------
Confidence 888 999999975 567778777654 232 35555432
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHH
Q 007456 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKA 429 (603)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~ 429 (603)
..+|.+.+++ +|+||...+.|+.++.++||.
T Consensus 213 T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk~ 243 (303)
T 4b4u_A 213 TQNLPELVKQ--ADIIVGAVGKAELIQKDWIKQ 243 (303)
T ss_dssp CSSHHHHHHT--CSEEEECSCSTTCBCGGGSCT
T ss_pred CCCHHHHhhc--CCeEEeccCCCCccccccccC
Confidence 1358888887 899999999999999998874
No 185
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=73.36 E-value=1.8 Score=43.67 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=30.5
Q ss_pred HHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 306 GLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 306 gll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
|++.+++-.| . .+++|+|||.+|.+++..|.+. | .+|+++++.
T Consensus 108 Gf~~~L~~~~----~---k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt 150 (269)
T 3phh_A 108 GFYLSLKQKN----Y---QNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS 150 (269)
T ss_dssp HHHHHCC-------C---CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHcC----C---CEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 4666665433 5 8999999999888888777653 4 368888875
No 186
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=73.25 E-value=1.4 Score=47.52 Aligned_cols=33 Identities=33% Similarity=0.559 Sum_probs=29.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||+++|+|..|.-+|..|+.+ |+ ++|.++|.+
T Consensus 41 ~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 9999999999999999999876 54 589999987
No 187
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=72.83 E-value=16 Score=37.70 Aligned_cols=147 Identities=16% Similarity=0.162 Sum_probs=86.7
Q ss_pred hCCCe-EEEeecCCCchHHHHHHHHhh-cCCccccCCc---hhHHHHHHHHHHHHHHh---------CC-------CCCC
Q 007456 262 RWPKA-IVQFEDFQMKWAFETLERYRK-RFCMFNDDIQ---GTAGVALAGLLGTVRAQ---------GL-------SLTD 320 (603)
Q Consensus 262 ~~P~~-~Iq~EDf~~~naf~iL~ryr~-~~~~FnDDiQ---GTaaV~lAgll~A~r~t---------g~-------~l~d 320 (603)
..|+. +|+.-=.+..|- . ++..++ -+.+.|---- .+|=-+++.+|+..|-. |. .-.+
T Consensus 61 ~~p~Lk~I~~~~~G~d~i-d-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 138 (334)
T 3kb6_A 61 KMPRLKLIHTRSVGFDHI-D-LDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARE 138 (334)
T ss_dssp TCTTCCEEEESSSCCTTB-C-HHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCC
T ss_pred cCCCCcEEEECCcccchh-c-HHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccce
Confidence 44655 555555554442 1 222222 3666664332 34444577777765421 10 1134
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCH
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 400 (603)
|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.. + .......+ ...+|
T Consensus 139 l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~~-----~---~~~~~~~~----------~~~~l 188 (334)
T 3kb6_A 139 LNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVVK-----R---EDLKEKGC----------VYTSL 188 (334)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC-----C---HHHHHTTC----------EECCH
T ss_pred ecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCcc-----c---hhhhhcCc----------eecCH
Confidence 4559999999999999999887664 44 577788631 1 11111111 13579
Q ss_pred HHHhcccCCcEEEee----cCCCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007456 401 LEVVRKVKPHVLLGL----SGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (603)
Q Consensus 401 ~e~V~~vkptvLIG~----S~~~g~Ft~evv~~M~~~~~erPIIF~LSNP 446 (603)
.|.++. .|+++=. ...-|.|+++.++.|. +..++.=.|.=
T Consensus 189 ~ell~~--sDivslh~Plt~~T~~li~~~~l~~mk----~~a~lIN~aRG 232 (334)
T 3kb6_A 189 DELLKE--SDVISLHVPYTKETHHMINEERISLMK----DGVYLINTARG 232 (334)
T ss_dssp HHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC----TTEEEEECSCG
T ss_pred HHHHhh--CCEEEEcCCCChhhccCcCHHHHhhcC----CCeEEEecCcc
Confidence 999988 6887733 1234899999999993 56677766653
No 188
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=72.79 E-value=7 Score=40.30 Aligned_cols=168 Identities=13% Similarity=0.082 Sum_probs=97.8
Q ss_pred CCCe-EEEeecCCCchHHHHHHHHh-hcCCccccCC---chhHHHHHHHHHHHHHHh---------CC--------CCCC
Q 007456 263 WPKA-IVQFEDFQMKWAFETLERYR-KRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL--------SLTD 320 (603)
Q Consensus 263 ~P~~-~Iq~EDf~~~naf~iL~ryr-~~~~~FnDDi---QGTaaV~lAgll~A~r~t---------g~--------~l~d 320 (603)
.|+. .|+.-=.+..|- .+ +..+ .-+.+.|--- +.+|=-+++-+|+..|-. |. .-.+
T Consensus 65 ~~~Lk~I~~~~~G~d~i-d~-~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~ 142 (330)
T 4e5n_A 65 CPELRVIGCALKGFDNF-DV-DACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTG 142 (330)
T ss_dssp CTTCCEEEESSSCCTTB-CH-HHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCC
T ss_pred CCCCcEEEECCCccccc-CH-HHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCc
Confidence 3655 566555554442 22 2222 3355555422 334556788888777621 10 0124
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCH
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 400 (603)
|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+... .....+..-+ ...+|
T Consensus 143 l~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~~------~~~~~~~~g~----------~~~~l 194 (330)
T 4e5n_A 143 LDNATVGFLGMGAIGLAMADRLQG-----WGA-------TLQYHEAKAL------DTQTEQRLGL----------RQVAC 194 (330)
T ss_dssp STTCEEEEECCSHHHHHHHHHTTT-----SCC-------EEEEECSSCC------CHHHHHHHTE----------EECCH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEECCCCC------cHhHHHhcCc----------eeCCH
Confidence 555999999999999999988754 354 6888887531 0111110001 12479
Q ss_pred HHHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEE
Q 007456 401 LEVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFA 468 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~A 468 (603)
.|+++. .|+++=.- ...+.++++.++.|. +..+|.=.|+-..--|---.+|++ +|+.-.|
T Consensus 195 ~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~arg~~vd~~aL~~aL~--~g~i~gA 258 (330)
T 4e5n_A 195 SELFAS--SDFILLALPLNADTLHLVNAELLALVR----PGALLVNPCRGSVVDEAAVLAALE--RGQLGGY 258 (330)
T ss_dssp HHHHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEE
T ss_pred HHHHhh--CCEEEEcCCCCHHHHHHhCHHHHhhCC----CCcEEEECCCCchhCHHHHHHHHH--hCCccEE
Confidence 999987 68877442 134789999999993 677888888754433333445544 4555433
No 189
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=72.65 E-value=19 Score=36.50 Aligned_cols=143 Identities=18% Similarity=0.224 Sum_probs=88.5
Q ss_pred hCCCe-EEEeecCCCchHHHHHHHHhhcCCcccc-CCch--hHHHHHHHHHHHHHHh---------C----C-CCCCCCC
Q 007456 262 RWPKA-IVQFEDFQMKWAFETLERYRKRFCMFND-DIQG--TAGVALAGLLGTVRAQ---------G----L-SLTDFAD 323 (603)
Q Consensus 262 ~~P~~-~Iq~EDf~~~naf~iL~ryr~~~~~FnD-DiQG--TaaV~lAgll~A~r~t---------g----~-~l~dl~~ 323 (603)
..|+. .|+.--.+..|- .+ +..+..+++.|- +... +|=-+++.+|+..|-. | . +..+|.+
T Consensus 47 ~~~~Lk~I~~~~~G~d~i-d~-~~~~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g 124 (303)
T 1qp8_A 47 KMPRLKFIQVVTAGLDHL-PW-ESIPPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQG 124 (303)
T ss_dssp HCTTCCCEEBSSSCCTTS-CC-TTSCTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTT
T ss_pred hCCCCcEEEECCcCcccc-cH-HHHhcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCC
Confidence 45666 666544444442 11 112334666663 3332 3334788888877631 1 1 2235666
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.++.|+|.|..|..+|+.+... |+ +++.+|+..- +. .+ . ...+|.|+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~-----G~-------~V~~~dr~~~-----~~------~~-~---------~~~~l~el 171 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL-----GA-------QVRGFSRTPK-----EG------PW-R---------FTNSLEEA 171 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT-----TC-------EEEEECSSCC-----CS------SS-C---------CBSCSHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCcc-----cc------Cc-c---------cCCCHHHH
Confidence 9999999999999999987653 44 6888887532 10 01 0 12468888
Q ss_pred hcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007456 404 VRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (603)
Q Consensus 404 V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSN 445 (603)
++. .|+++=.- ...+.|+++.++.|. +..++.=.|+
T Consensus 172 l~~--aDvV~l~~P~~~~t~~~i~~~~l~~mk----~gailin~sr 211 (303)
T 1qp8_A 172 LRE--ARAAVCALPLNKHTRGLVKYQHLALMA----EDAVFVNVGR 211 (303)
T ss_dssp HTT--CSEEEECCCCSTTTTTCBCHHHHTTSC----TTCEEEECSC
T ss_pred Hhh--CCEEEEeCcCchHHHHHhCHHHHhhCC----CCCEEEECCC
Confidence 877 78887542 234678888998883 5678888887
No 190
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=72.53 E-value=2.2 Score=40.78 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=26.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..|.. .|. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----ARK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCC
Confidence 689999999999999988765 353 69999974
No 191
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=72.32 E-value=25 Score=35.81 Aligned_cols=102 Identities=10% Similarity=0.089 Sum_probs=64.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccc-cCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD-PGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~-~~~~~~~~~~~~L~e 402 (603)
.++.|+|+|..|-.+++.+... .+. ++|+++|+. + .......|.+. .-+. ... ++.|
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~----a~~la~~l~~~~g~~~---~~~-~~~e 179 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY----A----SPEILERIGRRCGVPA---RMA-APAD 179 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT----C----CHHHHHHHHHHHTSCE---EEC-CHHH
T ss_pred cEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc----H----HHHHHHHHHHhcCCeE---EEe-CHHH
Confidence 7999999999988888776552 233 589999987 1 12222222211 1110 123 8999
Q ss_pred HhcccCCcEEEeecCCC-CCCCHHHHHHhhhcCCCCCeEEecCC--CCCccCCCHHHH
Q 007456 403 VVRKVKPHVLLGLSGVG-GVFNEEVLKAMRESDSVKPAIFAMSN--PTMNAECTAADA 457 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~-g~Ft~evv~~M~~~~~erPIIF~LSN--Pt~~aE~tpeda 457 (603)
+++. .|++|-+.... ..|..++ ..+..+|..++. |. +.|+.++-.
T Consensus 180 av~~--aDIVi~aT~s~~pvl~~~~-------l~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 180 IAAQ--ADIVVTATRSTTPLFAGQA-------LRAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp HHHH--CSEEEECCCCSSCSSCGGG-------CCTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred HHhh--CCEEEEccCCCCcccCHHH-------cCCCcEEEECCCCCCc-hhhcCHHHH
Confidence 9988 79999765432 3454332 346778988876 44 569988754
No 192
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=72.28 E-value=2.2 Score=42.49 Aligned_cols=34 Identities=29% Similarity=0.588 Sum_probs=27.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..+.+ .|. .++.++|+..
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 689999999999999998854 353 1699999875
No 193
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=71.96 E-value=2.5 Score=43.13 Aligned_cols=115 Identities=16% Similarity=0.245 Sum_probs=66.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||+.|..+|-.|+. .|+- ..++|+|.+-=..++ ..+|.+. .+|....... ..+..+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~-----~~~~-----~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v-----~~~~~~ 70 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVN-----QSIV-----DELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRV-----KAGEYS 70 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HCSC-----SEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEE-----EECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEE-----EeCCHH
Confidence 799999999999998887653 2442 479999975100000 0123322 2333111000 113466
Q ss_pred HhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007456 403 VVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~w 460 (603)
+++. .|++|=+.+.| |- .=+++++.|.+ +++.-+|+-.|||.. ...+-+++.
T Consensus 71 a~~~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~-~~p~a~viv~tNPv~---~~t~~~~k~ 136 (317)
T 3d0o_A 71 DCHD--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMA-SKFDGIFLVATNPVD---ILAYATWKF 136 (317)
T ss_dssp GGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-hCCCcEEEEecCcHH---HHHHHHHHH
Confidence 7777 78887444433 31 12456666754 789999999999986 344445453
No 194
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=71.77 E-value=2.7 Score=42.26 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=26.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|.++|..|.+. |. +++++|++
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 7999999999999999988763 53 57777764
No 195
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=71.64 E-value=3.9 Score=42.65 Aligned_cols=118 Identities=14% Similarity=0.215 Sum_probs=66.8
Q ss_pred CCCceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCC
Q 007456 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGA 398 (603)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~ 398 (603)
+...||.|+|| |..|..+|-.++. .|+. ..+.++|.+-=..++ ..+|.+. .|.. ... ....
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~~-----~evvLiDi~~~k~~g~a~DL~~~--~~~~--~~i---~~t~ 68 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRLT-----PNLCLYDPFAVGLEGVAEEIRHC--GFEG--LNL---TFTS 68 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTCC-----SCEEEECSCHHHHHHHHHHHHHH--CCTT--CCC---EEES
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCCC-----CEEEEEeCCchhHHHHHHhhhhC--cCCC--Cce---EEcC
Confidence 44589999998 9999999854443 4653 369999973100000 0123322 2311 111 1235
Q ss_pred CHHHHhcccCCcEEEeecCC---CCC-----------CCHHHHHHhhhcCCCCCe-EEecCCCCCccCCCHHHHhccc
Q 007456 399 SLLEVVRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPA-IFAMSNPTMNAECTAADAFKHA 461 (603)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~---~g~-----------Ft~evv~~M~~~~~erPI-IF~LSNPt~~aE~tpeda~~wt 461 (603)
++.+++++ .|++|=+.+. +|- .-+++++.+.+ ++..-+ |+-.|||.. ....-+++.+
T Consensus 69 d~~~al~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~-~~p~a~~vlvvsNPvd---~~t~i~~k~s 140 (343)
T 3fi9_A 69 DIKEALTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKS-YCPDCKHVIIIFNPAD---ITGLVTLIYS 140 (343)
T ss_dssp CHHHHHTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHH-HCTTCCEEEECSSSHH---HHHHHHHHHH
T ss_pred CHHHHhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hccCcEEEEEecCchH---HHHHHHHHHc
Confidence 78899988 6988744332 332 22455666643 777885 888999974 3444444443
No 196
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=71.45 E-value=1.8 Score=42.34 Aligned_cols=33 Identities=27% Similarity=0.564 Sum_probs=27.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 689999999999999988765 354 599999874
No 197
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=71.13 E-value=15 Score=38.03 Aligned_cols=149 Identities=16% Similarity=0.144 Sum_probs=88.9
Q ss_pred CCCe-EEEeecCCCchHHHHHHHH-hhcCCccccCC---chhHHHHHHHHHHHHHHh---------CC------CCCCCC
Q 007456 263 WPKA-IVQFEDFQMKWAFETLERY-RKRFCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL------SLTDFA 322 (603)
Q Consensus 263 ~P~~-~Iq~EDf~~~naf~iL~ry-r~~~~~FnDDi---QGTaaV~lAgll~A~r~t---------g~------~l~dl~ 322 (603)
.|+. .|+.--.+..|- . ++.. +.-+++.|--- +.+|=-+++.+|+..|-. |. .-.+|.
T Consensus 87 ~~~Lk~I~~~~~G~d~i-d-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~ 164 (335)
T 2g76_A 87 AEKLQVVGRAGTGVDNV-D-LEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELN 164 (335)
T ss_dssp CSSCCEEEESSSSCTTB-C-HHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCT
T ss_pred CCCCcEEEECCCCcchh-C-hHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCC
Confidence 4665 565554444442 1 1222 23366666532 334455688888877641 10 012445
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. ... .+.... ....+|.|
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~---------~~~---~~~~~g-----~~~~~l~e 215 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSF-----GM-------KTIGYDPII---------SPE---VSASFG-----VQQLPLEE 215 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSSS---------CHH---HHHHTT-----CEECCHHH
T ss_pred cCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECCCc---------chh---hhhhcC-----ceeCCHHH
Confidence 59999999999999999887643 43 688888641 111 111100 01247999
Q ss_pred HhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 403 VVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 403 ~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
+++. .|+++=+- ...+.|+++.++.|. +..++.=.|.-..
T Consensus 216 ll~~--aDvV~l~~P~t~~t~~li~~~~l~~mk----~gailIN~arg~v 259 (335)
T 2g76_A 216 IWPL--CDFITVHTPLLPSTTGLLNDNTFAQCK----KGVRVVNCARGGI 259 (335)
T ss_dssp HGGG--CSEEEECCCCCTTTTTSBCHHHHTTSC----TTEEEEECSCTTS
T ss_pred HHhc--CCEEEEecCCCHHHHHhhCHHHHhhCC----CCcEEEECCCccc
Confidence 9987 79887442 124678899999883 5678888887443
No 198
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=71.10 E-value=3.2 Score=37.10 Aligned_cols=32 Identities=28% Similarity=0.547 Sum_probs=26.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|+|..|..+|+.+... |. +++++|++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-----g~-------~V~vid~~ 51 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-----GH-------SVVVVDKN 51 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 8999999999999998887552 42 68889875
No 199
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=70.88 E-value=1.9 Score=48.77 Aligned_cols=34 Identities=38% Similarity=0.556 Sum_probs=30.1
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+.||+|+|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 17 ~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred cCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 39999999999999999999876 44 589999987
No 200
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=70.79 E-value=2.5 Score=40.77 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=27.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..+.. .|. ++.++|++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 689999999999999988765 353 59999997
No 201
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=69.96 E-value=10 Score=38.81 Aligned_cols=218 Identities=13% Similarity=0.117 Sum_probs=124.1
Q ss_pred CCe-EEEeecCCCchHHHHHHH----HhhcCCccc--cC--CchhHHHHHHHHHHHHHHh---------C----CCCCCC
Q 007456 264 PKA-IVQFEDFQMKWAFETLER----YRKRFCMFN--DD--IQGTAGVALAGLLGTVRAQ---------G----LSLTDF 321 (603)
Q Consensus 264 P~~-~Iq~EDf~~~naf~iL~r----yr~~~~~Fn--DD--iQGTaaV~lAgll~A~r~t---------g----~~l~dl 321 (603)
|+. .|+.-=.+..|-..-|+. .+..+++.| +- -+.+|=-+++.+|+..|-. | .+..+|
T Consensus 58 ~~Lk~I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l 137 (315)
T 3pp8_A 58 RRLKAVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTR 137 (315)
T ss_dssp CCCSEEEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCS
T ss_pred CCceEEEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCc
Confidence 776 777666666553231221 223455554 22 1455667788888887631 1 122345
Q ss_pred CCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHH
Q 007456 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (603)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~ 401 (603)
.+.+|.|+|.|..|..+|+.+... |+ +++.+|+..- ...... .+. ...+|.
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~-----G~-------~V~~~dr~~~------~~~~~~-~~~----------~~~~l~ 188 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAW-----GF-------PLRCWSRSRK------SWPGVE-SYV----------GREELR 188 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEEESSCC------CCTTCE-EEE----------SHHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEcCCch------hhhhhh-hhc----------ccCCHH
Confidence 559999999999999999988653 54 5888887521 111100 010 114689
Q ss_pred HHhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCcee
Q 007456 402 EVVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVD 477 (603)
Q Consensus 402 e~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv~ 477 (603)
|+++. .|+++=.- ..-+.|+++.++.|. +..|+.=.|+-..--|---.+|++ .|+.-.|.=-=|++-.
T Consensus 189 ell~~--aDiV~l~~Plt~~t~~li~~~~l~~mk----~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP 260 (315)
T 3pp8_A 189 AFLNQ--TRVLINLLPNTAQTVGIINSELLDQLP----DGAYVLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEP 260 (315)
T ss_dssp HHHHT--CSEEEECCCCCGGGTTCBSHHHHTTSC----TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSS
T ss_pred HHHhh--CCEEEEecCCchhhhhhccHHHHhhCC----CCCEEEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCC
Confidence 99887 79887431 124789999999993 577888888755433444444544 4654433211221111
Q ss_pred cCCCeeeccccccccccchhhHHHHHHhCCcccCHHHHHHHHHHHhccCC
Q 007456 478 LGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMT 527 (603)
Q Consensus 478 ~~~G~~~~p~Q~NN~~iFPGiglG~~~~~a~~Itd~m~~aAA~aLA~~v~ 527 (603)
.+.. ..--+..|+.+-|=++- .+. .+.|...+++-|.....
T Consensus 261 l~~~--~pL~~~~nvilTPHia~------~t~-~~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 261 LPQE--SPLWRHPRVAMTPHIAA------VTR-PAEAIDYISRTITQLEK 301 (315)
T ss_dssp CCTT--CGGGGCTTEEECSSCSS------CCC-HHHHHHHHHHHHHHHHH
T ss_pred CCCC--ChhhcCCCEEECCCCCc------ccH-HHHHHHHHHHHHHHHHc
Confidence 1101 11124568888887652 222 25677777777776654
No 202
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=69.91 E-value=4 Score=41.40 Aligned_cols=127 Identities=20% Similarity=0.317 Sum_probs=71.4
Q ss_pred eEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec--CC-cccCCCCCCChhhhccccccCCcCCcccCCCH
Q 007456 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK--DG-LITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (603)
Q Consensus 325 riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~--~G-Lv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 400 (603)
||+|.|| |..|..++..|+. .|+- ..++|+|. +- .+.....+|.+.. ++.....++. ....++
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~~-----~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~~~~~i~--~~~d~l 68 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPFM-----KDLVLIGREHSINKLEGLREDIYDAL-AGTRSDANIY--VESDEN 68 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTTC-----CEEEEEECGGGHHHHHHHHHHHHHHH-TTSCCCCEEE--EEETTC
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCCC-----CEEEEEcCCCchhhhHHHHHHHHHhH-HhcCCCeEEE--eCCcch
Confidence 8999999 9999998877653 3432 46999997 21 0000000122211 2221100100 001137
Q ss_pred HHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc--CCc
Q 007456 401 LEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA--GEN 464 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt--~Gr 464 (603)
.++++. .|++|=+.+.+ |- .++++++.|.+ ++ +.+|+-.|||.. ...+-+++.+ .-+
T Consensus 69 ~~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~-~~~vlv~SNPv~---~~t~~~~k~~~~p~~ 141 (313)
T 1hye_A 69 LRIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAE-IC-DTKIFVITNPVD---VMTYKALVDSKFERN 141 (313)
T ss_dssp GGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HC-CCEEEECSSSHH---HHHHHHHHHHCCCTT
T ss_pred HHHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-hC-CeEEEEecCcHH---HHHHHHHHhhCcChh
Confidence 788887 68888555544 32 35678888854 77 889999999986 3444454432 112
Q ss_pred EEEEcCC
Q 007456 465 IVFASGS 471 (603)
Q Consensus 465 ai~AtGS 471 (603)
-+|++|+
T Consensus 142 rviG~gt 148 (313)
T 1hye_A 142 QVFGLGT 148 (313)
T ss_dssp SEEECTT
T ss_pred cEEEeCc
Confidence 4556653
No 203
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=69.58 E-value=9.1 Score=37.85 Aligned_cols=104 Identities=16% Similarity=0.224 Sum_probs=59.4
Q ss_pred ceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCCh----hhhccccccCCcCCcccCC
Q 007456 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP----AAAPFAKDPGDFMGLREGA 398 (603)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~----~k~~fa~~~~~~~~~~~~~ 398 (603)
.||+|.|| |-.|..+++.|++. |-. -+++.+|+...-.. ...+.. ....+.+- ++ .+..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~-----g~~-----~~v~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~--Dl---~d~~ 88 (346)
T 4egb_A 25 MNILVTGGAGFIGSNFVHYMLQS-----YET-----YKIINFDALTYSGN-LNNVKSIQDHPNYYFVKG--EI---QNGE 88 (346)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHH-----CTT-----EEEEEEECCCTTCC-GGGGTTTTTCTTEEEEEC--CT---TCHH
T ss_pred CeEEEECCccHHHHHHHHHHHhh-----CCC-----cEEEEEeccccccc-hhhhhhhccCCCeEEEEc--CC---CCHH
Confidence 89999998 88888888877664 421 26777887532111 011111 01111111 11 1234
Q ss_pred CHHHHhcccCCcEEEeecCCCCCC----------------CHHHHHHhhhcCCCCCeEEecC
Q 007456 399 SLLEVVRKVKPHVLLGLSGVGGVF----------------NEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~F----------------t~evv~~M~~~~~erPIIF~LS 444 (603)
++.++++..++|++|=+.+....- |..+++++.+ ..-+-+||.=|
T Consensus 89 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~v~~SS 149 (346)
T 4egb_A 89 LLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKK-YPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHH-STTSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCc
Confidence 688889888899999777643221 3567888754 44445887543
No 204
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=69.55 E-value=2.7 Score=41.25 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=27.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..+.. .|. ++.++|++.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 689999999999999987754 353 689999864
No 205
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=69.45 E-value=2.7 Score=40.87 Aligned_cols=33 Identities=15% Similarity=0.183 Sum_probs=26.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+.. .|. ++.++|+..
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 40 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESLP 40 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcCC
Confidence 589999999999999987755 354 689999863
No 206
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=69.30 E-value=3.1 Score=42.75 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=27.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..|.+.. ..| .+|.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~--~~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLV--GSK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHH--GGG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhC--CCC-------CeEEEEeCCC
Confidence 47999999999999999887621 123 3688888764
No 207
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=69.28 E-value=6.1 Score=38.66 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=24.8
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-----GY-------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 689999999999999888653 43 57888764
No 208
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=69.07 E-value=4.3 Score=41.84 Aligned_cols=36 Identities=25% Similarity=0.400 Sum_probs=29.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
++|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 37 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKH 37 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCC
Confidence 689999999999999988865 3542 37999998763
No 209
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=68.99 E-value=3 Score=43.93 Aligned_cols=36 Identities=17% Similarity=0.178 Sum_probs=27.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.||+..|..|.+. ..| .+|.++|+..-
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~---~~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRL---DPE-------AHVTMIDQASR 39 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHH---CTT-------SEEEEECCC--
T ss_pred CcEEEECCCHHHHHHHHHHHhh---CcC-------CCEEEEECCCc
Confidence 7899999999999999988764 113 36888888654
No 210
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=68.63 E-value=1.5 Score=44.40 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=54.9
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC----------CcccCCCCCCChhhhccccccCCcC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD----------GLITKERKNLDPAAAPFAKDPGDFM 392 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~----------GLv~~~r~~l~~~k~~fa~~~~~~~ 392 (603)
..||.|+|+|+-|..+|..|... |. +++++ ++ |+.... ...+ +... .
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~-----G~-------~V~l~-~~~~~~~~i~~~g~~~~~----~~~~--~~~~---~- 75 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA-----GH-------EVILI-ARPQHVQAIEATGLRLET----QSFD--EQVK---V- 75 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT-----TC-------EEEEE-CCHHHHHHHHHHCEEEEC----SSCE--EEEC---C-
T ss_pred CCcEEEECcCHHHHHHHHHHHHC-----CC-------eEEEE-EcHhHHHHHHhCCeEEEc----CCCc--EEEe---e-
Confidence 38999999999999999988653 42 45544 32 111110 0000 0000 0
Q ss_pred CcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007456 393 GLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (603)
Q Consensus 393 ~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~ 449 (603)
....++.+ ++ .+|++| ++. +....+++++.++....+..+|..++|.-..
T Consensus 76 --~~~~~~~~-~~--~~D~vi-lav-k~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 76 --SASSDPSA-VQ--GADLVL-FCV-KSTDTQSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp --EEESCGGG-GT--TCSEEE-ECC-CGGGHHHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred --eeeCCHHH-cC--CCCEEE-EEc-ccccHHHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 01123332 33 368766 443 3336789999986534456688889998764
No 211
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=68.29 E-value=2.6 Score=36.03 Aligned_cols=32 Identities=22% Similarity=0.448 Sum_probs=25.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|+|..|..+++.+.. .|. +++++|++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~-----~g~-------~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHR-----MGH-------EVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 789999999999998887754 342 57888874
No 212
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=68.07 E-value=3.3 Score=43.28 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=26.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||||+|+|.||+..|..|.+. +-. -+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~~-----~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MPD-----LKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CTT-----CEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----CcC-----CeEEEEcCC
Confidence 5899999999999999988653 211 368888876
No 213
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=68.01 E-value=1.6 Score=44.89 Aligned_cols=114 Identities=19% Similarity=0.265 Sum_probs=66.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC--cccCCC-CCCChhhhccccccCCcCCcccCCCH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG--LITKER-KNLDPAAAPFAKDPGDFMGLREGASL 400 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G--Lv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L 400 (603)
.||.|+|||..|.++|..+.. .|+ ..+.++|.+- -..++. .+|.+. .++......+. ...+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~---~t~d- 72 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANII---GTSD- 72 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEE---EESC-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEE---EcCC-
Confidence 799999999999999988765 354 2699999861 011110 123222 13322111110 0112
Q ss_pred HHHhcccCCcEEEeecC---CCCC-----C------CHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007456 401 LEVVRKVKPHVLLGLSG---VGGV-----F------NEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 459 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~---~~g~-----F------t~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~ 459 (603)
.++++. .|++|=+.+ .||- | -+++++.+.+ +++.-+|+-.|||.. ....-+++
T Consensus 73 ~~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~vlvvsNPvd---~~t~~~~k 139 (315)
T 3tl2_A 73 YADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAK-HSPNAIIVVLTNPVD---AMTYSVFK 139 (315)
T ss_dssp GGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH---HHHHHHHH
T ss_pred HHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEECCChHH---HHHHHHHH
Confidence 456766 688774433 3342 2 2567777754 788899999999985 34444544
No 214
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=67.87 E-value=2.3 Score=41.41 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=26.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|||+|||.||+..|..|... |+ ++.++|+.
T Consensus 23 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 23 NKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 7899999999999999888653 54 58889984
No 215
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=67.63 E-value=2.8 Score=41.51 Aligned_cols=30 Identities=30% Similarity=0.564 Sum_probs=24.3
Q ss_pred EEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 326 IVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 326 iv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
|+|+|||.||+..|..|.+ .|+ ++.++|++
T Consensus 7 ViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred EEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 8999999999999887765 465 47788864
No 216
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=67.57 E-value=4.5 Score=41.89 Aligned_cols=32 Identities=28% Similarity=0.346 Sum_probs=27.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
..|||+|||.+|+.+|..|.+. |- .++.++|+
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~-----G~------~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVW-----SG------GSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----HC------SCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEcc
Confidence 7899999999999999988775 20 26999998
No 217
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=67.56 E-value=6.8 Score=42.22 Aligned_cols=183 Identities=15% Similarity=0.199 Sum_probs=100.2
Q ss_pred ccccccCChhhHHHHHhcCCCCCceEEEEec--------------------CccccccCCCCCCcccccchhHHHHHH--
Q 007456 149 GMYFSAKDKGEMMSMIYNWPAQQVDMIVLTD--------------------GSRILGLGDLGVQGIGIPIGKLDVYVA-- 206 (603)
Q Consensus 149 Glyis~~d~g~i~~~l~nwp~~~v~viVVTD--------------------G~rILGLGDlG~~GmgI~iGKl~LY~a-- 206 (603)
|.|++..|-..+..+|+.. +++++++.| |+.+=-+-++|..-.-|.++....+++
T Consensus 177 G~~~~~~D~~eik~lL~~~---Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~~~~A~~ 253 (458)
T 3pdi_B 177 SANLTPGDLEYIAESIESF---GLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADA 253 (458)
T ss_dssp CTTCCHHHHHHHHHHHHTT---TCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGGHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHc---CCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEEecHHHHHHHHH
Confidence 7777777777888888864 788888854 344444555555555566666654432
Q ss_pred ---hcCCCCCceeeEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCCCeEEEeecCCCchHHHHHH
Q 007456 207 ---AAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQFEDFQMKWAFETLE 283 (603)
Q Consensus 207 ---~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~~Iq~EDf~~~naf~iL~ 283 (603)
=-|+. .+-+ |..+|+ +-.|+|+.++.+.+-. ..| +.++
T Consensus 254 Le~~~GiP---~~~~--------------~~p~G~-----------~~T~~~l~~la~~~g~---~~~--------~~i~ 294 (458)
T 3pdi_B 254 LAERTGVP---DRRF--------------GMLYGL-----------DAVDAWLMALAEISGN---PVP--------DRYK 294 (458)
T ss_dssp HHHHSCCC---EEEE--------------CCSCHH-----------HHHHHHHHHHHHHHSS---CCC--------HHHH
T ss_pred HHHHHCCC---EEec--------------CCCcCH-----------HHHHHHHHHHHHHHCC---chH--------HHHH
Confidence 13454 2211 111222 2368888888888742 111 2345
Q ss_pred HHhhcCCccccCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEE
Q 007456 284 RYRKRFCMFNDDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL 363 (603)
Q Consensus 284 ryr~~~~~FnDDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~l 363 (603)
+.|.++ +.++.- ....|.. .|++|+|.+.-..++++.|.+ .|+.. +.+
T Consensus 295 ~er~r~--------------~~~~~d----~~~~l~G---krv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~ 342 (458)
T 3pdi_B 295 RQRAQL--------------QDAMLD----THFMLSS---ARTAIAADPDLLLGFDALLRS-----MGAHT------VAA 342 (458)
T ss_dssp HHHHHH--------------HHHHHH----HHHHHTT---CEEEEECCHHHHHHHHHHHHT-----TTCEE------EEE
T ss_pred HHHHHH--------------HHHHHH----HHHhcCC---CEEEEECCcHHHHHHHHHHHH-----CCCEE------EEE
Confidence 555431 112222 2233445 899999999999999988843 57632 222
Q ss_pred EecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC
Q 007456 364 LDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG 417 (603)
Q Consensus 364 vD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~ 417 (603)
.-.. ..+.+... +. .++. ..+...+++.++..+||.+||-|-
T Consensus 343 ~~~~-----~~~~~~~~--~~----~~v~-~~D~~~le~~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 343 VVPA-----RAAALVDS--PL----PSVR-VGDLEDLEHAARAGQAQLVIGNSH 384 (458)
T ss_dssp EESS-----CCSCCTTT--TS----SCEE-ESHHHHHHHHHHHHTCSEEEECTT
T ss_pred EECC-----CChhhhhC--cc----CcEE-eCCHHHHHHHHHhcCCCEEEEChh
Confidence 2111 11111111 00 0100 012234778899999999999663
No 218
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=67.53 E-value=3.2 Score=43.58 Aligned_cols=43 Identities=28% Similarity=0.294 Sum_probs=31.2
Q ss_pred HhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 313 AQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 313 ~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
+.++..+. .+|+|+|||.||+..|..|.+. |. ++.++++..-+
T Consensus 4 ~~~~~~~~---~~v~IIGaG~aGl~aA~~L~~~-----g~-------~v~v~E~~~~~ 46 (489)
T 2jae_A 4 LIGKVKGS---HSVVVLGGGPAGLCSAFELQKA-----GY-------KVTVLEARTRP 46 (489)
T ss_dssp CCCCCCSC---CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSSSS
T ss_pred hhhcccCC---CCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeccCCC
Confidence 33443445 7999999999999999887653 43 68888876543
No 219
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=67.24 E-value=3.9 Score=37.28 Aligned_cols=35 Identities=14% Similarity=0.297 Sum_probs=27.1
Q ss_pred CCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+.+|+|+|+|..|..+|+.|... .|. +++++|++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~----~g~-------~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRAR----YGK-------ISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHH----HCS-------CEEEEESC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc----cCC-------eEEEEECC
Confidence 348999999999999999888652 143 58888874
No 220
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=67.10 E-value=3.6 Score=36.98 Aligned_cols=33 Identities=33% Similarity=0.562 Sum_probs=26.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
-+++|+|+|.+|+-.|..+.+. | .++.++|+..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 4799999999999998887653 4 3688998763
No 221
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=66.89 E-value=3.4 Score=41.86 Aligned_cols=34 Identities=29% Similarity=0.295 Sum_probs=27.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|+|+|||.||+..|..|.+ .|+ ++.++|+.-.
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 789999999999999988765 354 6888887643
No 222
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=66.77 E-value=4.1 Score=34.66 Aligned_cols=32 Identities=28% Similarity=0.522 Sum_probs=25.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 689999999999999887755 24 268888874
No 223
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=66.71 E-value=23 Score=36.93 Aligned_cols=197 Identities=15% Similarity=0.105 Sum_probs=113.6
Q ss_pred cCCcccc-C-CchhHHHHHHHHHHHHHHh---------C---C-------------CCCCCCCceEEEeCcchhHHHHHH
Q 007456 288 RFCMFND-D-IQGTAGVALAGLLGTVRAQ---------G---L-------------SLTDFADQKIVVVGAGSAGLGVLK 340 (603)
Q Consensus 288 ~~~~FnD-D-iQGTaaV~lAgll~A~r~t---------g---~-------------~l~dl~~~riv~~GAGsAg~GiA~ 340 (603)
-+++.|. + -..+|=-+++-+|+..|-. | . .-.+|.+.+|.|+|.|..|..+|+
T Consensus 98 gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~ 177 (352)
T 3gg9_A 98 GVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAG 177 (352)
T ss_dssp TCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHH
Confidence 3666652 2 2344556677788776631 1 0 123455699999999999999999
Q ss_pred HHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeec----
Q 007456 341 MAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLS---- 416 (603)
Q Consensus 341 li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S---- 416 (603)
.+... |+ +++.+|+.. . . ..+... +.....+|.|+++. .|+++=.-
T Consensus 178 ~l~~~-----G~-------~V~~~d~~~--~-------~---~~~~~~----g~~~~~~l~ell~~--aDiV~l~~Plt~ 227 (352)
T 3gg9_A 178 YGRAF-----GM-------NVLVWGREN--S-------K---ERARAD----GFAVAESKDALFEQ--SDVLSVHLRLND 227 (352)
T ss_dssp HHHHT-----TC-------EEEEECSHH--H-------H---HHHHHT----TCEECSSHHHHHHH--CSEEEECCCCST
T ss_pred HHHhC-----CC-------EEEEECCCC--C-------H---HHHHhc----CceEeCCHHHHHhh--CCEEEEeccCcH
Confidence 88653 54 688888642 0 0 011110 00112479999988 68887432
Q ss_pred CCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcccCCcEEEEcCCCCCceecCCCeeeccccccccccch
Q 007456 417 GVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFP 496 (603)
Q Consensus 417 ~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt~Grai~AtGSPf~pv~~~~G~~~~p~Q~NN~~iFP 496 (603)
...+.|+++.++.|. +..++.=.|+-..--|---.+|++ +|+.-.|.=-=|++-..+ ....--+..|+.+-|
T Consensus 228 ~t~~li~~~~l~~mk----~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~--~~~pL~~~~nvilTP 299 (352)
T 3gg9_A 228 ETRSIITVADLTRMK----PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFETEPIL--QGHTLLRMENCICTP 299 (352)
T ss_dssp TTTTCBCHHHHTTSC----TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSSSCCC--SCCGGGGCTTEEECC
T ss_pred HHHHhhCHHHHhhCC----CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCCCCCC--CCChhhcCCCEEECC
Confidence 234789999999993 678999888855544555566665 454322210111111010 001112456888999
Q ss_pred hhHHHHHHhCCcccCHHHHHHHHHHHhccCC
Q 007456 497 GIGLGTLLSGARFITDGMLQQAAECLASYMT 527 (603)
Q Consensus 497 GiglG~~~~~a~~Itd~m~~aAA~aLA~~v~ 527 (603)
=+|- ....--+.|...+++-|.....
T Consensus 300 Hia~-----~t~e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 300 HIGY-----VERESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp SCTT-----CBHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCC-----CCHHHHHHHHHHHHHHHHHHHc
Confidence 7742 1122235567777777777654
No 224
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=66.60 E-value=5.8 Score=40.19 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=26.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|.++|..+... |. -+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999888764 41 268888876
No 225
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=66.47 E-value=19 Score=37.22 Aligned_cols=85 Identities=20% Similarity=0.344 Sum_probs=43.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcccccc-CCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDP-GDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~-~~~~~~~~~~~L~e 402 (603)
++|+|+|||+.|...+.+.. ..|. ++++.+|+. +.+..+++.- .+..-.....++.+
T Consensus 215 ~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~~-----------~~~~~~~~~lGa~~vi~~~~~~~~~ 272 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILK-----HAGA------SKVILSEPS-----------EVRRNLAKELGADHVIDPTKENFVE 272 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECSC-----------HHHHHHHHHHTCSEEECTTTSCHHH
T ss_pred CEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECCC-----------HHHHHHHHHcCCCEEEcCCCCCHHH
Confidence 79999999877655444332 2454 368877652 3333444321 00000011134555
Q ss_pred Hhcc----cCCcEEEeecCCCCCCCHHHHHHh
Q 007456 403 VVRK----VKPHVLLGLSGVGGVFNEEVLKAM 430 (603)
Q Consensus 403 ~V~~----vkptvLIG~S~~~g~Ft~evv~~M 430 (603)
.|+. -+.|+.|-+++.+....+.+++.+
T Consensus 273 ~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l 304 (404)
T 3ip1_A 273 AVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI 304 (404)
T ss_dssp HHHHHTTTCCCSEEEECSSCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEECCCCcHHHHHHHHHHH
Confidence 5543 368888877753212333444444
No 226
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=66.46 E-value=1.8 Score=44.66 Aligned_cols=117 Identities=17% Similarity=0.224 Sum_probs=65.6
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHH
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLL 401 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~ 401 (603)
..||.|+|||..|.++|..|.. .|+. .+.++|.+-=..++- .+|.+.. ++......+. ...+ .
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~-----~~~~------~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v~---~t~d-~ 68 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALI-----KQLG------DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKVR---GTND-Y 68 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEE---EESC-G
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCCc------eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEEE---EcCC-H
Confidence 3799999999999999877755 3541 699999852110000 0122111 1111111110 1122 4
Q ss_pred HHhcccCCcEEEeecCC---CCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc
Q 007456 402 EVVRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA 461 (603)
Q Consensus 402 e~V~~vkptvLIG~S~~---~g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt 461 (603)
++++. .|++|=+.+. +|- .-+++++.+.+ +++.-+|+-.|||.. ...+-+++.+
T Consensus 69 ~a~~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~-~~p~a~vivvtNPvd---~~t~~~~k~s 136 (321)
T 3p7m_A 69 KDLEN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKH-NCPNAFVICITNPLD---IMVNMLQKFS 136 (321)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTCEEEECCSSHH---HHHHHHHHHH
T ss_pred HHHCC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHH-HCCCcEEEEecCchH---HHHHHHHHhc
Confidence 67777 6887744433 342 12456666754 788889999999985 3344454443
No 227
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=66.08 E-value=3.7 Score=41.92 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=27.5
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.-+|+|+|||.||+..|..|.+. |+ ++.++|+.-
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 37899999999999999888653 54 588888764
No 228
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=66.02 E-value=3.7 Score=35.73 Aligned_cols=32 Identities=31% Similarity=0.634 Sum_probs=26.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|+|..|..+|+.|.+. |. +++++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~-----g~-------~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA-----GK-------KVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999998887653 43 58888874
No 229
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=65.77 E-value=3.6 Score=40.36 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=26.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 40 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGR-----AQL-------STLILEKG 40 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----cCC-------cEEEEeCC
Confidence 689999999999999987755 353 69999987
No 230
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=65.50 E-value=3.7 Score=33.83 Aligned_cols=85 Identities=19% Similarity=0.155 Sum_probs=49.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccc-cCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD-PGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~-~~~~~~~~~~~~L~e 402 (603)
.+|+|+|+|..|..+++.+.. .|. .+++++|++.- .+...+..-.+. ..++ ....++.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~~------~~~~~~~~~~~~~~~d~---~~~~~~~~ 65 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDLA------ALAVLNRMGVATKQVDA---KDEAGLAK 65 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCHH------HHHHHHTTTCEEEECCT---TCHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCHH------HHHHHHhCCCcEEEecC---CCHHHHHH
Confidence 799999999999988887765 341 36888887410 111111000000 0000 11235777
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhh
Q 007456 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRE 432 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~M~~ 432 (603)
+++. +|++|=+. |..++..+++.+.+
T Consensus 66 ~~~~--~d~vi~~~--~~~~~~~~~~~~~~ 91 (118)
T 3ic5_A 66 ALGG--FDAVISAA--PFFLTPIIAKAAKA 91 (118)
T ss_dssp HTTT--CSEEEECS--CGGGHHHHHHHHHH
T ss_pred HHcC--CCEEEECC--CchhhHHHHHHHHH
Confidence 7764 89998655 45567888887754
No 231
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=65.39 E-value=4.3 Score=36.05 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=26.8
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+.+|+|+|+|..|..+++.|... |. ++.++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~-----g~-------~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR-----GQ-------NVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 47899999999999999888653 42 68889885
No 232
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=65.29 E-value=3.6 Score=42.05 Aligned_cols=33 Identities=24% Similarity=0.560 Sum_probs=27.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 789999999999999887754 354 688999864
No 233
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=65.16 E-value=6.4 Score=40.75 Aligned_cols=37 Identities=14% Similarity=0.373 Sum_probs=29.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~~-----~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGFE-----GRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCcC-----CeEEEEECCCCC
Confidence 589999999999999988865 3543 469999987543
No 234
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=65.12 E-value=3.8 Score=41.06 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=28.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
..|||+|||.+|+.+|..|.+ .|+ ++.++|+..+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 689999999999999998866 354 6999998744
No 235
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=64.99 E-value=3.6 Score=40.35 Aligned_cols=33 Identities=33% Similarity=0.576 Sum_probs=26.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.+|+..|..|.+ .|+ ++.++|+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 569999999999999988865 355 588888764
No 236
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=64.80 E-value=2.2 Score=44.44 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=67.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||..|.++|..++.. |+- ..+.++|.+-=..++ ..+|.+. ..|.... .. ....++.+
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~-----g~~-----~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~-~i---~~t~d~~~ 86 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK-----DLA-----DEVALVDVMEDKLKGEMMDLEHG-SLFLHTA-KI---VSGKDYSV 86 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH-----CCC-----SEEEEECSCHHHHHHHHHHHHHH-GGGSCCS-EE---EEESSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----CeEEEEECCHHHHHHHHHHhhhh-hhcccCC-eE---EEcCCHHH
Confidence 6999999999999999887663 442 379999973100000 0123322 1332211 00 01234443
Q ss_pred HhcccCCcEEE---eecCCCCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhccc
Q 007456 403 VVRKVKPHVLL---GLSGVGGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHA 461 (603)
Q Consensus 403 ~V~~vkptvLI---G~S~~~g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~wt 461 (603)
+++ .|++| |....+|- .-+++++.+.+ +++.-+|+-.|||.. ....-+++.+
T Consensus 87 -~~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k-~~P~a~ilvvtNPvd---i~t~~~~k~s 152 (330)
T 3ldh_A 87 -SAG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVK-HSPDCLKELHPELGT---DKNKQDWKLS 152 (330)
T ss_dssp -CSS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHH-HCTTCEEEECSSSHH---HHHHHHHHHH
T ss_pred -hCC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHh-hCCCceEEeCCCccH---HHHHHHHHHh
Confidence 666 78887 33333331 12456677754 799999999999975 4555565554
No 237
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=64.80 E-value=3.5 Score=39.70 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=25.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFL-LDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~l-vD~~ 367 (603)
.+|||+|||.||+..|..+... |. ++.+ +|+.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 6899999999999999988663 43 4566 8873
No 238
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=64.70 E-value=3 Score=41.88 Aligned_cols=34 Identities=26% Similarity=0.443 Sum_probs=27.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
-.|+|+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 679999999999999988765 354 5888888753
No 239
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=64.62 E-value=12 Score=37.34 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=25.5
Q ss_pred ceEEEeC-cchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~G-AGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 5899999 99999999988754 353 58888764
No 240
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=64.59 E-value=4.2 Score=35.78 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=26.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|+|..|..+|+.|... |. +++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-----g~-------~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-----DI-------PLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 5899999999999999988653 43 68989884
No 241
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=64.56 E-value=3.2 Score=42.66 Aligned_cols=114 Identities=17% Similarity=0.257 Sum_probs=64.3
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
||.|+|||..|.++|..|+.. |+- ..+.++|.+-=..++. .+|.+.. .|....... ...+..++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~~-----~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~~v----~~~~~~~a 66 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DVA-----KEVVMVDIKDGMPQGKALDMRESS-PIHGFDTRV----TGTNDYGP 66 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TCS-----SEEEEECSSTTHHHHHHHHHHHHH-HHHTCCCEE----EEESSSGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CCC-----CEEEEEeCchHHHHHHHHHHhccc-cccCCCcEE----EECCCHHH
Confidence 799999999999999887764 441 4799999853111100 0222211 111111000 00134567
Q ss_pred hcccCCcEEEeecC---CCCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhc
Q 007456 404 VRKVKPHVLLGLSG---VGGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFK 459 (603)
Q Consensus 404 V~~vkptvLIG~S~---~~g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~ 459 (603)
+++ .|++|=+.+ .||- .-+++++.+. ++++..+|+-.|||.. ....-+++
T Consensus 67 ~~~--aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~-~~~p~a~vivvtNPvd---~~t~~~~k 130 (314)
T 3nep_X 67 TED--SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFV-EGSPDSTIIVVANPLD---VMTYVAYE 130 (314)
T ss_dssp GTT--CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHH-TTCTTCEEEECCSSHH---HHHHHHHH
T ss_pred hCC--CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHH-HhCCCcEEEecCCchh---HHHHHHHH
Confidence 777 688763333 3332 1245666775 4899999999999985 34444544
No 242
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=64.40 E-value=3.8 Score=42.34 Aligned_cols=150 Identities=15% Similarity=0.179 Sum_probs=79.0
Q ss_pred CCccccccCChhhHHHHHhcCCCCCceEEEEecCccccccCCCCCCcccccchhHHHHHHhcCCCCCceeeEEeeccCCc
Q 007456 147 PRGMYFSAKDKGEMMSMIYNWPAQQVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNN 226 (603)
Q Consensus 147 prGlyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN 226 (603)
|||--++--|-++ |-.+...++.+|||.+.=|- .- +..--||. .+|+.+-+| +
T Consensus 16 ~~~~~~~~~~~~~------~~~~~~Mki~IvTDSt~dL~------------~e----~~~~~~I~---vvPL~v~~~--~ 68 (315)
T 3fys_A 16 PRGSHMASMTGGQ------QMGRGSMNIAVVTDSTAYIP------------KE----MREQHQIH---MIPLQVVFR--E 68 (315)
T ss_dssp ------------------------CCCEEEEEEGGGCCC------------HH----HHHHHTEE---EECCEEECS--S
T ss_pred cCccccccccchh------hhCcCCCcEEEEEECCCCCC------------HH----HHHhCCeE---EEeEEEEEC--C
Confidence 5665544444332 22223357999999987542 11 11122677 899888884 3
Q ss_pred hhcccCcccccccccCCChhhhhHhHHHHHHHHHH--hCCCeEEEeecCCCchHHHHHHHHhh---c---C--CccccCC
Q 007456 227 QKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHA--RWPKAIVQFEDFQMKWAFETLERYRK---R---F--CMFNDDI 296 (603)
Q Consensus 227 ~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~--~~P~~~Iq~EDf~~~naf~iL~ryr~---~---~--~~FnDDi 296 (603)
++.+++- +--.+||.+.+++ ..|+. |.|+--++++-|++ + + .++..-
T Consensus 69 ~~Y~D~~---------------di~~~efy~~m~~~~~~p~T-------SqPs~~~~~~~fe~l~~~~~~Ii~I~iSS~- 125 (315)
T 3fys_A 69 ETYREEI---------------ELDWKSFYEEVKKHNELPTT-------SQPPIGELVALYEELGKSYDAVISIHLSSG- 125 (315)
T ss_dssp CEEEBTT---------------TBCHHHHHHHHHTTTCCCEE-------ECCCHHHHHHHHHHHTTTCSEEEEEESCTT-
T ss_pred EEEECCC---------------CCCHHHHHHHHHhCCCCccc-------CCCCHHHHHHHHHHHHhcCCcEEEEeCCCc-
Confidence 4443320 1236788888875 35765 22344444444433 2 1 233333
Q ss_pred chhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHH--HHHhcCC-Chhhh
Q 007456 297 QGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQA--AARMAGN-NDAFA 357 (603)
Q Consensus 297 QGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~--~~~~~Gl-s~~eA 357 (603)
|.|-+++.+.....+.+ .+|-++-..+++.|..-++..+ |. ++|. |.+|.
T Consensus 126 -------LSGTy~sA~~Aa~~~~~---~~I~ViDS~~~s~g~g~lv~~Aa~l~-~~G~~s~eeI 178 (315)
T 3fys_A 126 -------ISGTFSSAAAADSMVDN---IDVYPFDSEISCLAQGFYALKAAELI-KNGASSPEDI 178 (315)
T ss_dssp -------TCSHHHHHHHGGGGCSS---CEEEEEECSSCHHHHHHHHHHHHHHH-HTTCCCHHHH
T ss_pred -------HhHHHHHHHHHHHhCCC---CCEEEECCchhHHHHHHHHHHHHHHH-HcCCCCHHHH
Confidence 44445555555555566 7999999988888887777665 44 6899 88864
No 243
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=64.38 E-value=4 Score=39.93 Aligned_cols=32 Identities=38% Similarity=0.593 Sum_probs=26.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 689999999999999988765 353 58999985
No 244
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=64.29 E-value=5.6 Score=40.71 Aligned_cols=87 Identities=15% Similarity=0.196 Sum_probs=50.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.+|.|+|+|..|..+|..+... |. +++++|++. ... ...++... + ...++.|+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~-----G~-------~V~~~~~~~---------~~~-~~~a~~~G-~----~~~~~~e~ 69 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDS-----GV-------DVTVGLRSG---------SAT-VAKAEAHG-L----KVADVKTA 69 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECCTT---------CHH-HHHHHHTT-C----EEECHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC-----cC-------EEEEEECCh---------HHH-HHHHHHCC-C----EEccHHHH
Confidence 7899999999999999887653 53 477777642 110 11121110 0 01268888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHH-HhhhcCCCCCeEE
Q 007456 404 VRKVKPHVLLGLSGVGGVFNEEVLK-AMRESDSVKPAIF 441 (603)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~-~M~~~~~erPIIF 441 (603)
++. +|++| ++..+.. .+++++ .+.....+..+|.
T Consensus 70 ~~~--aDvVi-lavp~~~-~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 70 VAA--ADVVM-ILTPDEF-QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HHT--CSEEE-ECSCHHH-HHHHHHHHTGGGCCTTCEEE
T ss_pred Hhc--CCEEE-EeCCcHH-HHHHHHHHHHhhCCCCCEEE
Confidence 876 78877 4443333 378887 6643233344544
No 245
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=64.27 E-value=4.1 Score=40.07 Aligned_cols=32 Identities=22% Similarity=0.519 Sum_probs=27.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
..|+|+|||.+|+.+|-.|.+ .|. ++.++|+.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 689999999999999988865 354 68999987
No 246
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=64.14 E-value=4.6 Score=41.97 Aligned_cols=39 Identities=26% Similarity=0.411 Sum_probs=29.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.||+..|..|.+... ..+ . -++.++|+..-
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~-~~~-----~-~~v~liE~~~~ 69 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQ-AQG-----A-LEVLFLDKQGD 69 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHH-HHC-----C-CCEEEEESCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhccc-ccC-----c-ccEEEEecCCC
Confidence 479999999999999999987642 100 0 36899998753
No 247
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=63.85 E-value=4.4 Score=43.29 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=27.9
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..+|+|+|+|.||+..|..|... |. ++.++|+..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~~ 155 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRYD 155 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeccC
Confidence 37899999999999999998663 43 588998863
No 248
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=63.85 E-value=6.1 Score=40.73 Aligned_cols=36 Identities=22% Similarity=0.410 Sum_probs=28.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 789999999999999998865 3543 36999988643
No 249
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=63.78 E-value=5.1 Score=41.88 Aligned_cols=36 Identities=17% Similarity=0.321 Sum_probs=27.6
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..+|||+|||.||+..|..|.... .| .+|.++|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~---~~-------~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLK---PE-------WDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC---TT-------SEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhC---cC-------CCEEEEECCC
Confidence 378999999999999998886641 12 3688888765
No 250
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=63.62 E-value=4.1 Score=40.90 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=27.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..|+|+|||.+|+.+|..|.+ .|. ++.++|+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 679999999999999998865 354 599999874
No 251
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=63.24 E-value=4.1 Score=42.13 Aligned_cols=115 Identities=16% Similarity=0.249 Sum_probs=67.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||..|..+|..|... |+- ..+.++|.+-=..++ ..+|.+. .+|....-. -..+-.+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~-----~~~-----~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~-----i~~~~~~ 69 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ-----GIT-----DELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVK-----TSYGTYE 69 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TCC-----SEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCE-----EEEECGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC-----ceEEEEecchHHHHHHHHHHHhc-cccccCCeE-----EEeCcHH
Confidence 6999999999999999887653 442 479999973100000 0023332 233311100 0112235
Q ss_pred HhcccCCcEEEeecC---CCCC-------CC----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007456 403 VVRKVKPHVLLGLSG---VGGV-------FN----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (603)
Q Consensus 403 ~V~~vkptvLIG~S~---~~g~-------Ft----~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~w 460 (603)
+++. .|++|=+.+ .+|- .+ +++++.+.+ +++..+|+-.|||.. +..+-+++.
T Consensus 70 a~~~--aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~-~~p~a~vlvvtNPvd---~~t~~~~k~ 135 (326)
T 3pqe_A 70 DCKD--ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMA-SGFDGIFLVATNPVD---ILTYATWKF 135 (326)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCCeEEEEcCChHH---HHHHHHHHh
Confidence 6766 688763333 3342 12 566677754 889999999999986 445555554
No 252
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=63.15 E-value=3 Score=42.23 Aligned_cols=110 Identities=15% Similarity=0.130 Sum_probs=62.3
Q ss_pred ceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc---ccCCCCCCChhhhccccccCCcCCcccCCC
Q 007456 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL---ITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (603)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL---v~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 399 (603)
.||+|.|| |..|..++..|+. .|.-...-...++++|...- ......++.+...+|..+- ....+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di------~~~~~ 73 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGL------EATDD 73 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEE------EEESC
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCe------EeccC
Confidence 58999997 9999998887654 24310000126999997420 0000001111111222111 12246
Q ss_pred HHHHhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCC-CCCeEEecCCCC
Q 007456 400 LLEVVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDS-VKPAIFAMSNPT 447 (603)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~~-erPIIF~LSNPt 447 (603)
+.+++++ +|++|=+.+.+.. .|.++++.+.+ ++ ...+++-.|||.
T Consensus 74 ~~~a~~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~-~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 74 PKVAFKD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAE-VAKKDVKVLVVGNPA 133 (327)
T ss_dssp HHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSH
T ss_pred hHHHhCC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hcCCCeEEEEeCCch
Confidence 8889886 8998866655431 35567788854 54 555788899996
No 253
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=63.09 E-value=4.5 Score=41.37 Aligned_cols=33 Identities=33% Similarity=0.521 Sum_probs=26.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
-+|+|+|||.||+..|..|.+. |. ++.+++++.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecCC
Confidence 3699999999999999988764 54 588888753
No 254
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=63.04 E-value=4.8 Score=41.14 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=26.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..|.. .|+ ++.++|+.-
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 789999999999999988765 354 577888753
No 255
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=63.01 E-value=4.1 Score=40.77 Aligned_cols=35 Identities=31% Similarity=0.372 Sum_probs=28.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
..|+|+|||.+|+.+|..|.+. |. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~-----G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ-----GV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCCCC
Confidence 5799999999999999888653 54 69999987543
No 256
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=62.92 E-value=4.3 Score=40.55 Aligned_cols=33 Identities=9% Similarity=0.183 Sum_probs=26.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 789999999999999887754 354 689999864
No 257
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=62.23 E-value=4.6 Score=41.42 Aligned_cols=34 Identities=35% Similarity=0.470 Sum_probs=26.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..|.+ .|+ +++.++|+..
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 689999999999999988765 354 2377888754
No 258
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=62.23 E-value=5.5 Score=41.31 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=29.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
.+|||+|||.||+..|..+.+. |.+ .+|.++|+..-+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~-----g~~-----~~V~lie~~~~~ 44 (408)
T 2gqw_A 8 APVVVLGAGLASVSFVAELRQA-----GYQ-----GLITVVGDEAER 44 (408)
T ss_dssp SSEEEECCSHHHHHHHHHHHHH-----TCC-----SCEEEEESSCSC
T ss_pred CcEEEECChHHHHHHHHHHHcc-----CCC-----CeEEEEECCCCC
Confidence 6899999999999999988764 432 369999987643
No 259
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=62.10 E-value=17 Score=35.95 Aligned_cols=21 Identities=29% Similarity=0.509 Sum_probs=17.5
Q ss_pred ceEEEeCcchhHHHHHHHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQ 344 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~ 344 (603)
.||+++|+|..|..+++.+.+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~ 24 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEE 24 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHHh
Confidence 689999999998887777654
No 260
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=61.98 E-value=15 Score=33.67 Aligned_cols=50 Identities=14% Similarity=0.282 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 303 ~lAgll~A~r~tg~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.++..+.+++....--.. ++++|.|| |..|..+++++.. .|. +++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~~~~-----~G~-------~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPG---ERVLIHSATGGVGMAAVSIAKM-----IGA-------RIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTT---CEEEETTTTSHHHHHHHHHHHH-----HTC-------EEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCC---CEEEEeeCCChHHHHHHHHHHH-----cCC-------EEEEEeCC
Confidence 444455555433322234 79999994 7777777766543 242 58878763
No 261
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=61.83 E-value=5.6 Score=39.81 Aligned_cols=33 Identities=27% Similarity=0.530 Sum_probs=27.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..|+|+|||.+|+.+|-.|.+ .|. ++.++|+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~-----~G~-------~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILAR-----KGY-------SVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeccC
Confidence 689999999999999988854 353 699999864
No 262
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=61.77 E-value=15 Score=37.74 Aligned_cols=109 Identities=17% Similarity=0.272 Sum_probs=58.4
Q ss_pred CCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC
Q 007456 295 DIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER 374 (603)
Q Consensus 295 DiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r 374 (603)
+.++.....++..+.+++..+.+. . ++|+|+|||..|...+.+.. ..|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~~-g---~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~~------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIKA-G---STVAILGGGVIGLLTVQLAR-----LAGA------TTVILSTRQ------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCCT-T---CEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECSC-------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECCC-------
Confidence 345544445666667777666544 4 69999999876655444332 2454 368877653
Q ss_pred CCCChhhhcccccc-CCcCCcccCCCHHHHhcc---c---CCcEEEeecCCCCCCCHHHHHHh
Q 007456 375 KNLDPAAAPFAKDP-GDFMGLREGASLLEVVRK---V---KPHVLLGLSGVGGVFNEEVLKAM 430 (603)
Q Consensus 375 ~~l~~~k~~fa~~~-~~~~~~~~~~~L~e~V~~---v---kptvLIG~S~~~g~Ft~evv~~M 430 (603)
+.+..+++.- .+..-+....++.+.++. . +.|++|=+++. +..-++.++.+
T Consensus 217 ----~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~-~~~~~~~~~~l 274 (370)
T 4ej6_A 217 ----ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGV-AETVKQSTRLA 274 (370)
T ss_dssp ----HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCC-HHHHHHHHHHE
T ss_pred ----HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCC-HHHHHHHHHHh
Confidence 3344444421 000000112456666654 1 57888877652 22334555555
No 263
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=61.69 E-value=4.5 Score=41.13 Aligned_cols=33 Identities=12% Similarity=0.345 Sum_probs=26.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 689999999999999988765 354 588888764
No 264
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=61.63 E-value=4.8 Score=40.53 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=28.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..|+|+|||.+|+.+|-.|.+. .|. .++.++|+..
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 6899999999999999988761 241 2699999875
No 265
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=61.60 E-value=5.4 Score=43.33 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=28.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.||+..|..|... ..| .+|.++|+..-
T Consensus 37 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~ 72 (588)
T 3ics_A 37 RKIVVVGGVAGGASVAARLRRL---SEE-------DEIIMVERGEY 72 (588)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhh---CcC-------CCEEEEECCCC
Confidence 7999999999999999888764 113 36899998754
No 266
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=61.38 E-value=9 Score=40.24 Aligned_cols=91 Identities=16% Similarity=0.237 Sum_probs=48.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcccccc-CCc---C-CcccCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDP-GDF---M-GLREGA 398 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~-~~~---~-~~~~~~ 398 (603)
.||+|+|||..|..+|+.|.+ .|- .-.+++++|++- +.+......+.... ... . ...+..
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~~------~~~~~la~~l~~~~~~~~~~~~~D~~d~~ 66 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRTL------SKCQEIAQSIKAKGYGEIDITTVDADSIE 66 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESCH------HHHHHHHHHHHHTTCCCCEEEECCTTCHH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECCH------HHHHHHHHHhhhhcCCceEEEEecCCCHH
Confidence 489999998666655555433 331 003688888741 11111111221100 000 0 001234
Q ss_pred CHHHHhcccCCcEEEeecCCCCCCCHHHHHHhh
Q 007456 399 SLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMR 431 (603)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~ 431 (603)
++.++++..++|++|=+++. .+..++++...
T Consensus 67 ~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l 97 (405)
T 4ina_A 67 ELVALINEVKPQIVLNIALP--YQDLTIMEACL 97 (405)
T ss_dssp HHHHHHHHHCCSEEEECSCG--GGHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEECCCc--ccChHHHHHHH
Confidence 68889998899999977642 23566666653
No 267
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=61.37 E-value=3.9 Score=41.64 Aligned_cols=33 Identities=27% Similarity=0.475 Sum_probs=27.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|-.|.+ .|+ ++.++|++-
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 589999999999999987754 465 588999874
No 268
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=61.29 E-value=4.3 Score=40.46 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=28.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
..|+|+|||.+|+.+|-.|.+. |+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCCC
Confidence 5799999999999999888653 54 59999987543
No 269
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=60.99 E-value=9.8 Score=38.58 Aligned_cols=58 Identities=24% Similarity=0.328 Sum_probs=35.0
Q ss_pred cCCchhHHHHHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 294 DDIQGTAGVALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 294 DDiQGTaaV~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
++.++.....++..+.+++..+.+. . ++|+|+|||..|...+.+.. ..|. ++|+.+|+
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~~~-g---~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGVRL-G---DPVLICGAGPIGLITMLCAK-----AAGA------CPLVITDI 212 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCCT-T---CCEEEECCSHHHHHHHHHHH-----HTTC------CSEEEEES
T ss_pred CHHHHHhhhHHHHHHHHHHHcCCCC-C---CEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECC
Confidence 3334444444555666776666543 4 68999999877766554332 2454 35887775
No 270
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=60.89 E-value=5.4 Score=42.48 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=28.5
Q ss_pred CceEEEeCcchhHHHHHHHHHH-HHHH-hcCCChhhhcCeEEEEecC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQ-AAAR-MAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~-~~~~-~~Gls~~eA~~~i~lvD~~ 367 (603)
..+|+|+|||.||+..|..+.. .... ..| .+|.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLD-------MAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCC-------EEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCC-------CeEEEEecC
Confidence 3789999999999999999977 4210 002 369999986
No 271
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=60.85 E-value=5.8 Score=40.32 Aligned_cols=34 Identities=35% Similarity=0.402 Sum_probs=25.7
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
+|+|+|||.||+..|-.|.+. .-|+ ++.++|+.-
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G~-------~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPLW-------AIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTTS-------EEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCCC-------CEEEEECCC
Confidence 699999999999999887653 1143 577787653
No 272
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=60.74 E-value=5.3 Score=40.47 Aligned_cols=35 Identities=26% Similarity=0.564 Sum_probs=28.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
..|||+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999988765 354 59999987654
No 273
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=60.69 E-value=2.9 Score=46.11 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=29.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 33 AHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred CeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 9999999999999999988876 54 689999987
No 274
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=60.63 E-value=6.9 Score=41.56 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=28.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+.+... . ..++.++|+..
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~--~-------~~~V~lie~~~ 71 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYG--D-------ANEIVVFDQNS 71 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHG--G-------GSEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCC--C-------CCeEEEEECCC
Confidence 789999999999999999877530 0 13789999864
No 275
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=60.58 E-value=3 Score=45.03 Aligned_cols=32 Identities=13% Similarity=0.296 Sum_probs=24.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||||+|+|.||+..|+.|.. .+ -+|.++|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 589999999999988876532 12 269999986
No 276
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=60.53 E-value=4.7 Score=42.73 Aligned_cols=38 Identities=24% Similarity=0.462 Sum_probs=28.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..+.+.. ..|++. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcC
Confidence 58999999999999999987732 146531 138899886
No 277
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=60.42 E-value=7.5 Score=40.87 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=26.6
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
||||+|+|.||+..|..+.+. |.+ -+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~~-----~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DKE-----SDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CSS-----SCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CCC-----CcEEEEeCCC
Confidence 799999999999999877553 432 3689998754
No 278
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=60.41 E-value=5.5 Score=41.84 Aligned_cols=32 Identities=25% Similarity=0.535 Sum_probs=26.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|||+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 36 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVE-----QGA-------QVTLIERG 36 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 689999999999999977754 343 79999987
No 279
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=60.33 E-value=7.5 Score=38.68 Aligned_cols=34 Identities=24% Similarity=0.484 Sum_probs=27.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.-|+|+|||.||+..|..+.+. +.|+ ++.++|+.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 6799999999999999888654 3465 58889875
No 280
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=60.10 E-value=15 Score=36.77 Aligned_cols=48 Identities=21% Similarity=0.269 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 304 lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
....+.+++..+.+. . ++++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 149 ~~ta~~~l~~~~~~~-g---~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 149 GVTTYKAIKVSGVKP-G---DWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHTCCT-T---CEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeeEEeeecccCCCC-C---CEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 344567777776654 4 6999999998886554443332 23 37888876
No 281
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=60.05 E-value=16 Score=39.18 Aligned_cols=32 Identities=31% Similarity=0.395 Sum_probs=26.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|..+|..+.+. |. +++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G~-------~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----GA-------NVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----CC-------EEEEEECC
Confidence 5899999999999999888764 43 57888865
No 282
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=60.04 E-value=8.8 Score=39.15 Aligned_cols=116 Identities=16% Similarity=0.221 Sum_probs=66.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||..|..+|-+|... |+- ..+.|+|..-=..++- -+|.+.. +|....... ...+-.+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~-----~~~-----~el~L~Di~~~~~~G~a~DL~h~~-~~~~~~~~i----~~~~d~~ 65 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN-----LDV-----DEIALVDIAEDLAVGEAMDLAHAA-AGIDKYPKI----VGGADYS 65 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SCC-----SEEEEECSSHHHHHHHHHHHHHHH-GGGTCCCEE----EEESCGG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CCC-----CEEEEEeCCCCcchhhhhhhhccc-ccCCCCCeE----ecCCCHH
Confidence 3899999999999888877642 442 4699999742111110 1344322 222111110 0111234
Q ss_pred HhcccCCcEEEeecCC---CCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCCccCCCHHHHhcc
Q 007456 403 VVRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKH 460 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~---~g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tpeda~~w 460 (603)
++++ .|++|=+.+. ||- .-+++++.++ +++...||.-.|||.. ....-+++.
T Consensus 66 ~~~~--aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~-~~~p~aivlvvsNPvd---~~t~i~~k~ 131 (294)
T 2x0j_A 66 LLKG--SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIV-ENAPESKILVVTNPMD---VMTYIMWKE 131 (294)
T ss_dssp GGTT--CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHH-TTSTTCEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHH-hcCCceEEEEecCcch---hhHHhhHHH
Confidence 5666 6888745443 442 1135666775 4899999999999985 444455553
No 283
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=59.89 E-value=6.9 Score=40.15 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=27.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||-+|+..|..|.+... +.+- ..++.++++.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~-~~~~-----~~~V~vlEa~ 43 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIK-EKNL-----PLELTLVEAS 43 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHT-TTTC-----SEEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhcc-ccCC-----CCCEEEEECC
Confidence 689999999999999999988641 0010 1267777775
No 284
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=59.83 E-value=5.4 Score=40.32 Aligned_cols=33 Identities=24% Similarity=0.505 Sum_probs=26.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|-.|... |+ ++.++|+..
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 5799999999999999887654 54 577888754
No 285
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=59.77 E-value=8.3 Score=41.21 Aligned_cols=35 Identities=14% Similarity=0.388 Sum_probs=28.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..|... ..| .+|.++|+..
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~---~~g-------~~V~lie~~~ 46 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRAR---DPG-------ARVLIVSEDP 46 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHH---STT-------CEEEEEESSS
T ss_pred CCEEEECChHHHHHHHHHHHhc---CCC-------CeEEEEeCCC
Confidence 7899999999999999988654 112 4799999874
No 286
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=59.76 E-value=4.2 Score=39.90 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=26.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
.+|+|+|||.||+..|..|... |+ ++.++|+
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 6899999999999999888653 54 5888987
No 287
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=59.52 E-value=5.2 Score=42.39 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=27.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.||+..|-.|..... .|+ +|.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999998877431 343 6889998643
No 288
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=59.49 E-value=5.8 Score=41.54 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=28.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.||+..|..|.+. ..| .+|.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK---YPQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCCC
Confidence 5899999999999999988764 113 37999988753
No 289
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=59.32 E-value=5.6 Score=38.56 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=26.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 479999999999999988755 354 168999985
No 290
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=59.30 E-value=13 Score=37.81 Aligned_cols=49 Identities=29% Similarity=0.443 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 303 ~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
.++..+.|++..+.+. . ++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~~~-g---~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGVTL-G---HKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTCCT-T---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 3444556666555433 4 699999998777665544332 353 46888875
No 291
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=59.18 E-value=7.9 Score=38.52 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=26.9
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhh-cCeEEEEecCC
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFA-RNKFFLLDKDG 368 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA-~~~i~lvD~~G 368 (603)
.|+|+|||.+|+.+|-.|.+.. .+. . ..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G-----~~~--~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERY-----HSV--LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH-----TTT--SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhc-----ccc--CCCceEEEEECCC
Confidence 5899999999999998887642 000 0 03799999873
No 292
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=59.07 E-value=8.8 Score=39.83 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=27.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..|... ..| -+|.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~---~~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL---MPD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH---CTT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC---CCC-------CeEEEECCCC
Confidence 6899999999999999988762 123 3688888864
No 293
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=58.65 E-value=5.8 Score=37.73 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=26.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
-+|+|+|||.+|+..|..+.+. |+ ++.++|+.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~-----g~-------~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQK-----GV-------RVGLLTQS 35 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 6799999999999999887653 53 68889876
No 294
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=58.46 E-value=6.9 Score=40.27 Aligned_cols=35 Identities=31% Similarity=0.506 Sum_probs=27.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..|||+|||.+|+.+|..|.+. .-|+ ++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~---~pG~-------~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQL---APGR-------SLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhc---CCCC-------eEEEEeCCC
Confidence 5799999999999999888653 0143 589999863
No 295
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=58.44 E-value=6.2 Score=42.31 Aligned_cols=36 Identities=14% Similarity=0.328 Sum_probs=28.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.||||+|||.||+..|..|... ..| -+|.++|+..-
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~---~~~-------~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL---SET-------AEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhh---CcC-------CCEEEEECCCC
Confidence 4899999999999999888663 112 37899998754
No 296
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=58.05 E-value=27 Score=35.11 Aligned_cols=94 Identities=16% Similarity=0.157 Sum_probs=53.1
Q ss_pred ceEEEeC-cchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~G-AGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||+++| .|..|.-+++++... .++ +=+..+|+++--..++ ++. .++.-.. +.+-..++.+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~----~~~------eLv~~~d~~~~~~~G~-d~g----el~g~~~---gv~v~~dl~~ 69 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAA----PDA------TLVGALDRTGSPQLGQ-DAG----AFLGKQT---GVALTDDIER 69 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHC----TTE------EEEEEBCCTTCTTTTS-BTT----TTTTCCC---SCBCBCCHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhC----CCC------EEEEEEEecCcccccc-cHH----HHhCCCC---CceecCCHHH
Confidence 7999999 799998888887652 333 2245577764211111 111 0110000 1122467999
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEE
Q 007456 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF 441 (603)
+++. |||+|=+|. |.+. .+.++...+ +..|+|.
T Consensus 70 ll~~--~DVVIDfT~-p~a~-~~~~~~al~--~G~~vVi 102 (272)
T 4f3y_A 70 VCAE--ADYLIDFTL-PEGT-LVHLDAALR--HDVKLVI 102 (272)
T ss_dssp HHHH--CSEEEECSC-HHHH-HHHHHHHHH--HTCEEEE
T ss_pred HhcC--CCEEEEcCC-HHHH-HHHHHHHHH--cCCCEEE
Confidence 8874 999998874 3332 445555433 4566665
No 297
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=57.99 E-value=6.1 Score=43.72 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=27.5
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+.+|||+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~ 55 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERS 55 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCC
Confidence 3899999999999999987755 354 68899987
No 298
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=57.97 E-value=5.7 Score=41.49 Aligned_cols=32 Identities=28% Similarity=0.356 Sum_probs=26.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|-.|.+. |+ ++.++|++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5799999999999999877663 54 68889875
No 299
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=57.89 E-value=33 Score=37.44 Aligned_cols=146 Identities=22% Similarity=0.215 Sum_probs=85.3
Q ss_pred CCCe-EEEeecCCCchHHHHHHHH-hhcCCccccCC---chhHHHHHHHHHHHHHHh--------CCC-------CCCCC
Q 007456 263 WPKA-IVQFEDFQMKWAFETLERY-RKRFCMFNDDI---QGTAGVALAGLLGTVRAQ--------GLS-------LTDFA 322 (603)
Q Consensus 263 ~P~~-~Iq~EDf~~~naf~iL~ry-r~~~~~FnDDi---QGTaaV~lAgll~A~r~t--------g~~-------l~dl~ 322 (603)
.|+. .|+.--.+..|- . ++.. +.-+.+.|--- ..+|=-++|.+|+..|-. ... -.+|.
T Consensus 64 ~~~Lk~i~~~~~G~d~i-d-~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~ 141 (529)
T 1ygy_A 64 APKLKIVARAGVGLDNV-D-VDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIF 141 (529)
T ss_dssp CTTCCEEEESSSCCTTB-C-HHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCT
T ss_pred CCCCcEEEECCcCcCcc-C-HhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccC
Confidence 4555 566555555552 1 1122 22355555432 334555788888877631 000 12445
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
+.++.|+|.|..|..+|+.+... |+ +++.+|+.- +..+ +.... . ...++.|
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~-----G~-------~V~~~d~~~---------~~~~---a~~~g-~----~~~~l~e 192 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAF-----GA-------YVVAYDPYV---------SPAR---AAQLG-I----ELLSLDD 192 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECTTS---------CHHH---HHHHT-C----EECCHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEECCCC---------ChhH---HHhcC-c----EEcCHHH
Confidence 59999999999999999887543 43 688888641 1111 11100 0 1137899
Q ss_pred HhcccCCcEEEeec----CCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007456 403 VVRKVKPHVLLGLS----GVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (603)
Q Consensus 403 ~V~~vkptvLIG~S----~~~g~Ft~evv~~M~~~~~erPIIF~LSN 445 (603)
+++. .|+++=+- ...+.++++.+..|. +..+|.=.|.
T Consensus 193 ~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~~k----~g~ilin~ar 233 (529)
T 1ygy_A 193 LLAR--ADFISVHLPKTPETAGLIDKEALAKTK----PGVIIVNAAR 233 (529)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC----TTEEEEECSC
T ss_pred HHhc--CCEEEECCCCchHHHHHhCHHHHhCCC----CCCEEEECCC
Confidence 9987 78877442 234678887887773 5678887774
No 300
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=57.89 E-value=6.8 Score=41.04 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=27.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..+.+. |. ++.++|+..
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQL-----GF-------KTTCIEKRG 39 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 6799999999999999877653 43 699999873
No 301
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=57.82 E-value=6.6 Score=39.98 Aligned_cols=33 Identities=30% Similarity=0.422 Sum_probs=26.4
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
+|+|+|||.+|+..|..|.+. |. ++.++++..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G~-------~V~vlE~~~~ 34 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----GH-------EVEVFERLPI 34 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------EEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----CC-------ceEEEeCCCC
Confidence 699999999999999888663 53 6888887643
No 302
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=57.75 E-value=6.3 Score=43.02 Aligned_cols=34 Identities=29% Similarity=0.327 Sum_probs=28.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.||+..|..|.+ .|+ +|.++|+..-
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~~ 43 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGED 43 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 789999999999999998865 354 5999998743
No 303
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=57.65 E-value=4.2 Score=39.51 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=25.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 689999999999999988765 354 57788854
No 304
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=57.59 E-value=6.7 Score=40.21 Aligned_cols=33 Identities=33% Similarity=0.564 Sum_probs=26.4
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
+|+|+|||.+|+..|-.|.+. |. ++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G~-------~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----GH-------EIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCCC
Confidence 699999999999999888663 53 6888887643
No 305
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=57.58 E-value=6.9 Score=41.54 Aligned_cols=36 Identities=19% Similarity=0.406 Sum_probs=27.2
Q ss_pred CCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
++..+||+|+|.|.+|+++|++|.+. |. ++...|.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~-----G~-------~V~~~D~~ 41 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKL-----GA-------IVTVNDGK 41 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEEESS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 34459999999999999998887663 43 56666663
No 306
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=57.47 E-value=6 Score=41.25 Aligned_cols=36 Identities=22% Similarity=0.466 Sum_probs=27.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..|...+. .| -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 689999999999999999877421 23 3688888764
No 307
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=57.25 E-value=6 Score=38.64 Aligned_cols=31 Identities=29% Similarity=0.532 Sum_probs=24.3
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
-|+|+|||+||+..|..+.+ .|+ ++.++|+.
T Consensus 8 DvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 47999999999999876644 454 58889874
No 308
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=57.18 E-value=6.8 Score=41.64 Aligned_cols=36 Identities=28% Similarity=0.489 Sum_probs=27.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+.+.- ..|. ++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G~-------~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PETT-------QVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTTE-------EEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCcC-------EEEEEeCCC
Confidence 57999999999999999887640 0143 699999874
No 309
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=57.18 E-value=7.3 Score=40.73 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=27.4
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999887641 13 3799999875
No 310
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=57.17 E-value=3.6 Score=46.95 Aligned_cols=35 Identities=31% Similarity=0.525 Sum_probs=30.1
Q ss_pred CCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 349999999999999999988765 54 689999987
No 311
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=56.85 E-value=5.9 Score=42.87 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=29.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.||...|-.|..... .|+ +|.++|+.-.
T Consensus 26 ~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~~ 62 (550)
T 2e4g_A 26 DKILIVGGGTAGWMAASYLGKALQ--GTA-------DITLLQAPDI 62 (550)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTT--TSS-------EEEEEECCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhcC--CCC-------cEEEEeCCCC
Confidence 679999999999999998876421 343 6999998643
No 312
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=56.84 E-value=7.6 Score=40.53 Aligned_cols=35 Identities=14% Similarity=0.347 Sum_probs=27.4
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999887641 13 37889988653
No 313
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=56.73 E-value=6 Score=47.04 Aligned_cols=37 Identities=19% Similarity=0.427 Sum_probs=31.8
Q ss_pred CCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+|+. .||+|+|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 24 rL~~---s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 24 KMQT---SNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHTT---CEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHhc---CEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 3455 9999999999999999999887 44 689999987
No 314
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=56.67 E-value=6.2 Score=41.81 Aligned_cols=34 Identities=26% Similarity=0.420 Sum_probs=27.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
-+|+|+|||.||+..|..+.+ .|. ++.++|++.-
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~~~ 59 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQ-----LGM-------KVAVVEKRST 59 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCCC
Confidence 579999999999999988765 353 6999997643
No 315
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=56.37 E-value=7.6 Score=43.42 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=27.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+... |. ++.++|+..
T Consensus 392 ~~VvIIGgG~AGl~aA~~La~~-----G~-------~V~liE~~~ 424 (690)
T 3k30_A 392 ARVLVVGAGPSGLEAARALGVR-----GY-------DVVLAEAGR 424 (690)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 6899999999999999988664 43 699999864
No 316
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=56.32 E-value=6.7 Score=40.35 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=28.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
..|||+|||.+|+.+|-.|.+ .|. +++.++|+....
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 579999999999999987765 354 269999987654
No 317
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=56.27 E-value=7.6 Score=40.20 Aligned_cols=35 Identities=26% Similarity=0.494 Sum_probs=27.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
-||||+|||.||+..|..| . ..| .+|.++|+.--+
T Consensus 10 ~~~vIvGgG~AGl~aA~~L----~-~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAA----L-GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CSEEEECCSHHHHHHHHHH----T-TTC-------SCEEEECSSSSC
T ss_pred CCEEEEcCcHHHHHHHHHH----h-CCC-------CEEEEEECCCCC
Confidence 6899999999999999998 1 223 369999887543
No 318
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=55.78 E-value=9.8 Score=38.35 Aligned_cols=99 Identities=27% Similarity=0.400 Sum_probs=50.8
Q ss_pred HHHHHHHHHH-HhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhh
Q 007456 303 ALAGLLGTVR-AQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAA 381 (603)
Q Consensus 303 ~lAgll~A~r-~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k 381 (603)
.++..+.+++ ..+. .. ++|+|+|||..|..++.+... .|. ++++.+|+. +.+
T Consensus 149 ~~~ta~~~l~~~~~~--~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~-----------~~~ 201 (343)
T 2dq4_A 149 PFGNAVHTVYAGSGV--SG---KSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN-----------PYR 201 (343)
T ss_dssp HHHHHHHHHHSTTCC--TT---SCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC-----------HHH
T ss_pred HHHHHHHHHHHhCCC--CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC-----------HHH
Confidence 3444456665 3333 56 899999998777666544332 354 368877753 122
Q ss_pred hccccccCC-cCCcccCCCHHHHhcc---cCCcEEEeecCCCCCCCHHHHHHh
Q 007456 382 APFAKDPGD-FMGLREGASLLEVVRK---VKPHVLLGLSGVGGVFNEEVLKAM 430 (603)
Q Consensus 382 ~~fa~~~~~-~~~~~~~~~L~e~V~~---vkptvLIG~S~~~g~Ft~evv~~M 430 (603)
..+++.-.+ .- .....++.+.++. -+.|++|=+++.+ ...++.++.|
T Consensus 202 ~~~~~~la~~v~-~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~~l 252 (343)
T 2dq4_A 202 LAFARPYADRLV-NPLEEDLLEVVRRVTGSGVEVLLEFSGNE-AAIHQGLMAL 252 (343)
T ss_dssp HGGGTTTCSEEE-CTTTSCHHHHHHHHHSSCEEEEEECSCCH-HHHHHHHHHE
T ss_pred HHHHHHhHHhcc-CcCccCHHHHHHHhcCCCCCEEEECCCCH-HHHHHHHHHH
Confidence 222221100 00 0011356666653 2578888776521 2234555555
No 319
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=55.62 E-value=5.6 Score=39.37 Aligned_cols=32 Identities=22% Similarity=0.413 Sum_probs=26.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 789999999999999988765 354 57888864
No 320
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=55.49 E-value=6.5 Score=42.98 Aligned_cols=34 Identities=29% Similarity=0.313 Sum_probs=28.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.||+..|..|.+ .|+ +|.++|+..-
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~~ 55 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAASG 55 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 789999999999999988865 354 6999998643
No 321
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=55.33 E-value=7.9 Score=41.02 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=28.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 72 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEI 72 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 57999999999999999886631 13 37899998754
No 322
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=55.22 E-value=6.8 Score=41.24 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=27.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+.+. |. ++.++|+..
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 39 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQL-----GF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCC
Confidence 5799999999999999887653 53 699999874
No 323
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=55.10 E-value=9.6 Score=39.63 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=27.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||-+|+..|..|.+. |- ..++.++++..
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 7899999999999999988764 41 03688888753
No 324
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=55.10 E-value=4.6 Score=40.17 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=26.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.+|+.+|..|.+.. ..|+ ++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G~-------~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGPL-------YLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CCE-------EEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCCc-------eEEEEECC
Confidence 47999999999999998886510 1343 68889876
No 325
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=55.01 E-value=7.3 Score=41.15 Aligned_cols=32 Identities=28% Similarity=0.568 Sum_probs=27.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~ 36 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAA-----FGK-------RVALIESK 36 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEcCC
Confidence 689999999999999988765 343 69999986
No 326
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=54.94 E-value=6.7 Score=42.20 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=27.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+.+. |. ++.++|+..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 76 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAM-----GG-------RQLIVDRWP 76 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 6899999999999999888653 43 699999875
No 327
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=54.90 E-value=6.9 Score=40.93 Aligned_cols=33 Identities=30% Similarity=0.429 Sum_probs=26.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
-+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LGM-------KVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 579999999999999977754 353 699999873
No 328
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=54.75 E-value=6.3 Score=41.55 Aligned_cols=34 Identities=29% Similarity=0.537 Sum_probs=27.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 28 ~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 679999999999999877755 354 6899998754
No 329
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=54.69 E-value=6.6 Score=41.61 Aligned_cols=33 Identities=27% Similarity=0.500 Sum_probs=27.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.-
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~~ 44 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAAS-----YGA-------KTLLVEAKA 44 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TSC-------CEEEEESSC
T ss_pred CCEEEEcCCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 689999999999999988765 253 699999863
No 330
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=54.53 E-value=6.3 Score=38.15 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=24.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..+.+ .|. ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 579999999999999987754 354 57777653
No 331
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=54.46 E-value=6.9 Score=42.05 Aligned_cols=36 Identities=28% Similarity=0.442 Sum_probs=28.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|-.|..... .|+ +|.++|+.-
T Consensus 6 ~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 6 KNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 689999999999999988866310 354 699999854
No 332
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=54.45 E-value=7.3 Score=40.93 Aligned_cols=33 Identities=33% Similarity=0.443 Sum_probs=26.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~~ 35 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQ-----LGM-------KTACVEKRG 35 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999977655 354 699999873
No 333
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=54.45 E-value=6.2 Score=41.44 Aligned_cols=32 Identities=28% Similarity=0.374 Sum_probs=26.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 689999999999999977654 354 69999986
No 334
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=54.23 E-value=7.9 Score=36.65 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=26.1
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
..||.|+|+|..|..+|..+... |. +++++|++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~-----g~-------~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA-----GH-------EVTYYGSK 51 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 38999999999999999888653 42 68888764
No 335
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=54.14 E-value=6.9 Score=41.77 Aligned_cols=33 Identities=24% Similarity=0.539 Sum_probs=27.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
-.|+|+|||.+|+++|..+.. .|+ ++.++|+..
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 579999999999999988765 365 589999864
No 336
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=53.75 E-value=6.6 Score=41.11 Aligned_cols=32 Identities=34% Similarity=0.492 Sum_probs=26.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|||+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LGQ-------KVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 569999999999999977755 353 69999986
No 337
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=53.68 E-value=11 Score=39.31 Aligned_cols=35 Identities=29% Similarity=0.533 Sum_probs=28.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..|.+ .|.. .++.++|++.
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~~ 41 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERRG 41 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSSS
T ss_pred CEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecCC
Confidence 789999999999999988765 3542 2688999863
No 338
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=53.58 E-value=8.2 Score=41.40 Aligned_cols=35 Identities=31% Similarity=0.412 Sum_probs=28.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
.+|+|+|||.||+..|..+.. .|+ ++.++|+..-+
T Consensus 93 ~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~~ 127 (497)
T 2bry_A 93 TKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIKF 127 (497)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSSC
T ss_pred CCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEecccc
Confidence 789999999999999988765 354 68899987443
No 339
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=53.51 E-value=9.5 Score=37.20 Aligned_cols=38 Identities=18% Similarity=0.216 Sum_probs=23.6
Q ss_pred CCCCCceEEEeCcc-h--hHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 319 TDFADQKIVVVGAG-S--AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 319 ~dl~~~riv~~GAG-s--Ag~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|++.++||.||+ . .|.++|+.+ . +.|. +++++|++-
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l----~-~~G~-------~V~~~~r~~ 62 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAM----H-REGA-------ELAFTYVGQ 62 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHH----H-HTTC-------EEEEEECTT
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHH----H-HcCC-------EEEEeeCch
Confidence 33455999999984 3 344445444 4 3453 688888864
No 340
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=53.36 E-value=25 Score=35.12 Aligned_cols=49 Identities=18% Similarity=0.303 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 303 ~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
.++..+.+.+..+.+ .. ++++|.|||+.|...+.++ . ..|. +.++.+|+
T Consensus 145 ~~~~~~~~~~~~~~~-~g---~~VlV~GaG~vG~~aiq~a-k----~~G~------~~vi~~~~ 193 (346)
T 4a2c_A 145 PITVGLHAFHLAQGC-EN---KNVIIIGAGTIGLLAIQCA-V----ALGA------KSVTAIDI 193 (346)
T ss_dssp HHHHHHHHHHHTTCC-TT---SEEEEECCSHHHHHHHHHH-H----HTTC------SEEEEEES
T ss_pred HHHHHHHHHHHhccC-CC---CEEEEECCCCcchHHHHHH-H----HcCC------cEEEEEec
Confidence 344445555555543 34 7999999998775544333 2 2354 45777765
No 341
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=53.10 E-value=7.7 Score=40.91 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=27.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+.+ .|. ++.++|+.-
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~-----~g~-------~V~lie~~~ 39 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQ-----LGL-------KVLAVEAGE 39 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 789999999999999988854 343 699999864
No 342
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=53.04 E-value=9.5 Score=38.51 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 303 ~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
.++..+.|++..+. .. ++|+|+|||..|..++.+... .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~~--~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SG---KSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSCC--TT---CCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcCC--CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 33344555543332 55 899999998777766654432 353 36887775
No 343
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=52.91 E-value=6.7 Score=41.21 Aligned_cols=32 Identities=25% Similarity=0.500 Sum_probs=26.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~ 36 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAM-----YGQ-------KCALIEAK 36 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEcCC
Confidence 689999999999999988754 343 69999986
No 344
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=52.52 E-value=8.7 Score=40.37 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=27.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..+.+ .|+ ++.++|+..
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 38 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQ-----LGF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 579999999999999988765 354 699999854
No 345
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=52.30 E-value=7.9 Score=41.83 Aligned_cols=34 Identities=29% Similarity=0.447 Sum_probs=28.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.||+..|..|.+. |+ ++.++|+..-
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~~ 50 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAGD 50 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCCC
Confidence 6899999999999999888653 54 5889998643
No 346
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=52.17 E-value=6.3 Score=38.71 Aligned_cols=35 Identities=20% Similarity=0.360 Sum_probs=27.9
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
|.+.++||+|+|..|...++.|+++ | .++.++|.+
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 4459999999999999988888775 3 268888864
No 347
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=52.09 E-value=18 Score=36.99 Aligned_cols=105 Identities=21% Similarity=0.316 Sum_probs=62.0
Q ss_pred eEEEeC-cchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCC-CCCChhhhccccccCCcCCcccCCCHHH
Q 007456 325 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKER-KNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 325 riv~~G-AGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r-~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
||.|+| +|..|..+|-+|... +++. ..+.|+|..-. .++. .+|.+. ++ +. ..... ...+..+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~~-----~el~L~Di~~~-~~G~a~Dl~~~--~~--~~-~v~~~-~~~~~~~ 65 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPSG-----SELSLYDIAPV-TPGVAVDLSHI--PT--AV-KIKGF-SGEDATP 65 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCTT-----EEEEEECSSTT-HHHHHHHHHTS--CS--SE-EEEEE-CSSCCHH
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCCC-----ceEEEEecCCC-chhHHHHhhCC--CC--Cc-eEEEe-cCCCcHH
Confidence 899999 799999998777442 2432 47999999741 1110 012211 11 00 00000 0124677
Q ss_pred HhcccCCcEEEeecCC---CCC-----------CCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 403 VVRKVKPHVLLGLSGV---GGV-----------FNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~---~g~-----------Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
+.++ .|+.|=+.+. +|- .-+++++.+.+ +++.-+|+-.|||..
T Consensus 66 ~~~~--aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~-~~p~a~vlvvtNPvd 122 (312)
T 3hhp_A 66 ALEG--ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAK-TCPKACIGIITNPVN 122 (312)
T ss_dssp HHTT--CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECSSCHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEecCcch
Confidence 8888 7988755443 332 12456666654 788889999999985
No 348
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=52.08 E-value=13 Score=38.69 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=28.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.||+..|..+.+ .|.+ .+|.++|+..-
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~-----~g~~-----~~V~lie~~~~ 40 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRA-----SGWE-----GNIRLVGDATV 40 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCCS
T ss_pred CcEEEEcCHHHHHHHHHHHHc-----cCcC-----CCEEEEECCCC
Confidence 689999999999999998765 3542 37999997643
No 349
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=51.96 E-value=8.5 Score=40.51 Aligned_cols=34 Identities=29% Similarity=0.385 Sum_probs=27.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
-.|+|+|||.||+..|..+.+ .|+ ++.++|+++-
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~~ 38 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKGE 38 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTSS
T ss_pred ceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCCC
Confidence 579999999999999988754 354 6999996653
No 350
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=51.84 E-value=7.7 Score=41.38 Aligned_cols=33 Identities=27% Similarity=0.535 Sum_probs=27.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+.+. |. ++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g~-------~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----NA-------KVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEeCCC
Confidence 5799999999999999888652 43 699999874
No 351
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=51.56 E-value=15 Score=37.37 Aligned_cols=42 Identities=24% Similarity=0.347 Sum_probs=25.9
Q ss_pred HHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCC
Q 007456 400 LLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNP 446 (603)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNP 446 (603)
+...++..|||++||..+-.. +.-.+++.....|+|.=-+|-
T Consensus 84 ~~~~l~~~~PDvVi~~g~~~s-----~p~~laA~~~~iP~vihe~n~ 125 (365)
T 3s2u_A 84 ALRVIRQLRPVCVLGLGGYVT-----GPGGLAARLNGVPLVIHEQNA 125 (365)
T ss_dssp HHHHHHHHCCSEEEECSSSTH-----HHHHHHHHHTTCCEEEEECSS
T ss_pred HHHHHHhcCCCEEEEcCCcch-----HHHHHHHHHcCCCEEEEecch
Confidence 345688899999999765321 111222335578998755553
No 352
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=51.37 E-value=9.2 Score=38.54 Aligned_cols=100 Identities=18% Similarity=0.243 Sum_probs=54.3
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcccc---ccCCcCCcccCCC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAK---DPGDFMGLREGAS 399 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~---~~~~~~~~~~~~~ 399 (603)
+.||.|+|+|+.|..+|..|.++ | .+++++|+..- .....++...+ +...+ +..-..+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~------~~~~l~~~g~~~~~~~~~~-~~~~~~~ 74 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE------IVDLINVSHTSPYVEESKI-TVRATND 74 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH------HHHHHHHHSCBTTBTTCCC-CSEEESC
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH------HHHHHHHhCCcccCCCCee-eEEEeCC
Confidence 38999999999999999988764 4 26888887411 01110000000 00000 0001234
Q ss_pred HHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007456 400 LLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (603)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~ 449 (603)
+.| ++. .|++| ++. +....+++++.++ . +..+|..++|..+.
T Consensus 75 ~~~-~~~--aDvVi-l~v-k~~~~~~v~~~l~--~-~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 75 LEE-IKK--EDILV-IAI-PVQYIREHLLRLP--V-KPSMVLNLSKGIEI 116 (335)
T ss_dssp GGG-CCT--TEEEE-ECS-CGGGHHHHHTTCS--S-CCSEEEECCCCCCT
T ss_pred HHH-hcC--CCEEE-EEC-CHHHHHHHHHHhC--c-CCCEEEEEeCCCCC
Confidence 555 544 57655 332 3356677777663 2 45577788886543
No 353
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=51.22 E-value=12 Score=38.49 Aligned_cols=92 Identities=22% Similarity=0.310 Sum_probs=53.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcccccc-CCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDP-GDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~-~~~~~~~~~~~L~e 402 (603)
.||+|+|||-.|--+|+.|.+ ..++.+.|+.. ..+...+ +++... -+ ..+..+|.+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~------~~~~~~~-~~~~~~~~d---~~d~~~l~~ 73 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN------ENLEKVK-EFATPLKVD---ASNFDKLVE 73 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH------HHHHHHT-TTSEEEECC---TTCHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH------HHHHHHh-ccCCcEEEe---cCCHHHHHH
Confidence 689999999888777766532 13577777641 1121111 121110 00 012346888
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007456 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN 445 (603)
.+++ .|++|-+ .|..+..+++++-.+ +... +|=+|-
T Consensus 74 ~~~~--~DvVi~~--~p~~~~~~v~~~~~~--~g~~-yvD~s~ 109 (365)
T 3abi_A 74 VMKE--FELVIGA--LPGFLGFKSIKAAIK--SKVD-MVDVSF 109 (365)
T ss_dssp HHTT--CSEEEEC--CCGGGHHHHHHHHHH--HTCE-EEECCC
T ss_pred HHhC--CCEEEEe--cCCcccchHHHHHHh--cCcc-eEeeec
Confidence 8887 6998854 467788999988754 2222 555664
No 354
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=51.18 E-value=35 Score=33.16 Aligned_cols=94 Identities=18% Similarity=0.334 Sum_probs=55.0
Q ss_pred ceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||+|.|| |-.|..+++.|.+ .|. +++.+++. ..... +. ...+..- + .. ..++.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g~-------~V~~~~r~---~~~~~-~~--~~~~~~~--D---l~-~~~~~~ 58 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DGN-------TPIILTRS---IGNKA-IN--DYEYRVS--D---YT-LEDLIN 58 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEESC---CC--------CCEEEEC--C---CC-HHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CCC-------EEEEEeCC---CCccc-CC--ceEEEEc--c---cc-HHHHHH
Confidence 68999996 8888777777665 342 68888886 11111 22 1122111 1 11 245777
Q ss_pred HhcccCCcEEEeecCCCCC------------CCHHHHHHhhhcCCCCCeEEecC
Q 007456 403 VVRKVKPHVLLGLSGVGGV------------FNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~------------Ft~evv~~M~~~~~erPIIF~LS 444 (603)
+++ ++|++|=+.+..+. -+..+++.+.+ ..-+-+||.=|
T Consensus 59 ~~~--~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~-~~~~r~v~~SS 109 (311)
T 3m2p_A 59 QLN--DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYE-NNISNIVYAST 109 (311)
T ss_dssp HTT--TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred hhc--CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEcc
Confidence 887 58999987764332 14677888854 44455887543
No 355
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=51.12 E-value=17 Score=39.83 Aligned_cols=100 Identities=9% Similarity=0.193 Sum_probs=55.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCCh-hhhccccccCCcCCcccCCC-HH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLREGAS-LL 401 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~-~k~~fa~~~~~~~~~~~~~~-L~ 401 (603)
.||||+|||+.|-++|.+|++- .++.. .+|.+.|++--. + ++.+ ....+..-. ... ..... |.
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~----~dv~~----~~I~vaD~~~~~---~-~~~~~~g~~~~~~~--Vda-dnv~~~l~ 78 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEK----FDIKP----SQVTIIAAEGTK---V-DVAQQYGVSFKLQQ--ITP-QNYLEVIG 78 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH----BCCCG----GGEEEEESSCCS---C-CHHHHHTCEEEECC--CCT-TTHHHHTG
T ss_pred CCEEEECcCHHHHHHHHHHHhC----CCCce----eEEEEeccchhh---h-hHHhhcCCceeEEe--ccc-hhHHHHHH
Confidence 7899999999999999999773 44432 368888875211 1 1111 111221110 000 00111 33
Q ss_pred HHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCC
Q 007456 402 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSN 445 (603)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSN 445 (603)
.+|+. +|++|=+| ...++.+++++-.+ ..=-.+-++|
T Consensus 79 aLl~~--~DvVIN~s--~~~~~l~Im~acle---aGv~YlDTa~ 115 (480)
T 2ph5_A 79 STLEE--NDFLIDVS--IGISSLALIILCNQ---KGALYINAAT 115 (480)
T ss_dssp GGCCT--TCEEEECC--SSSCHHHHHHHHHH---HTCEEEESSC
T ss_pred HHhcC--CCEEEECC--ccccCHHHHHHHHH---cCCCEEECCC
Confidence 35554 49999655 56677788877644 2234555665
No 356
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=51.08 E-value=6.9 Score=37.85 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=23.9
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.|+|+|||.||+..|..+.. .|+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 59999999999998865543 454 57788874
No 357
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=51.07 E-value=7.8 Score=41.62 Aligned_cols=23 Identities=26% Similarity=0.361 Sum_probs=19.5
Q ss_pred eEEEeCcchhHHHHHHHHHHHHH
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAA 347 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~ 347 (603)
-||++|||.+|+++|-.|.+...
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~ 63 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALD 63 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHC
T ss_pred cEEEEcccHHHHHHHHHHHhcCC
Confidence 38999999999999988876543
No 358
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.74 E-value=8.4 Score=40.53 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=26.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.++||+|||.||+..|..+.+. |. ++.++|+.
T Consensus 6 ~dvvIIG~G~aGl~aA~~l~~~-----g~-------~V~lie~~ 37 (458)
T 1lvl_A 6 TTLLIIGGGPGGYVAAIRAGQL-----GI-------PTVLVEGQ 37 (458)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEccC
Confidence 5799999999999999777553 43 69999984
No 359
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=50.72 E-value=7.1 Score=42.55 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=27.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..|.+ +.|+ ++.++|+..
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 689999999999999988862 2454 699999864
No 360
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=50.49 E-value=7.8 Score=41.46 Aligned_cols=33 Identities=24% Similarity=0.518 Sum_probs=27.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..|+|+|||.+|+..|-.|.+ .|+ ++.++|++-
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 689999999999999987765 365 588888764
No 361
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=50.49 E-value=9.4 Score=40.07 Aligned_cols=32 Identities=34% Similarity=0.617 Sum_probs=27.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..|.++ |. ++.++++.
T Consensus 45 ~~V~IIGAGiaGL~aA~~L~~~-----G~-------~V~VlE~~ 76 (376)
T 2e1m_A 45 KRILIVGAGIAGLVAGDLLTRA-----GH-------DVTILEAN 76 (376)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-----SC-------EEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 7999999999999999888663 53 68888876
No 362
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=50.47 E-value=15 Score=35.73 Aligned_cols=87 Identities=16% Similarity=0.271 Sum_probs=52.3
Q ss_pred CceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHH
Q 007456 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (603)
Q Consensus 323 ~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~ 401 (603)
..+|+|.|| |-.|..+++.|++ .|. +++.+++. ..-++. +..++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D~~-----------------d~~~~~ 48 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELNLL-----------------DSRAVH 48 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCCTT-----------------CHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCCcc-----------------CHHHHH
Confidence 378999996 7777777666644 342 46666543 000111 123577
Q ss_pred HHhcccCCcEEEeecCCCCC-----------------CCHHHHHHhhhcCCCCCeEEecC
Q 007456 402 EVVRKVKPHVLLGLSGVGGV-----------------FNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~-----------------Ft~evv~~M~~~~~erPIIF~LS 444 (603)
++++.+++|++|=+.+..+. -+..+++.+.+ ..-+.+||.=|
T Consensus 49 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS 107 (321)
T 1e6u_A 49 DFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ-NDVNKLLFLGS 107 (321)
T ss_dssp HHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred HHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEcc
Confidence 88886679999988765431 13456666643 44456777544
No 363
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=50.33 E-value=9.5 Score=40.36 Aligned_cols=32 Identities=22% Similarity=0.464 Sum_probs=26.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
..|+|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~ 58 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGA-----LGK-------RVAIAEEY 58 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CcC-------EEEEEeCC
Confidence 689999999999999988765 354 68999984
No 364
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=50.33 E-value=9.3 Score=43.16 Aligned_cols=33 Identities=24% Similarity=0.519 Sum_probs=27.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+... |. ++.++|+..
T Consensus 390 ~~VvIIGgGpAGl~aA~~L~~~-----G~-------~Vtlie~~~ 422 (729)
T 1o94_A 390 DSVLIVGAGPSGSEAARVLMES-----GY-------TVHLTDTAE 422 (729)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 7899999999999999888653 43 599999864
No 365
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=50.21 E-value=10 Score=40.36 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=27.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|+|.||+..|..+... |- ..+|.++|+.-
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~~ 41 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQL 41 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSSS
T ss_pred ceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCCC
Confidence 6899999999999999988764 31 13799999863
No 366
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=49.95 E-value=8.8 Score=40.83 Aligned_cols=22 Identities=36% Similarity=0.613 Sum_probs=20.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQA 345 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~ 345 (603)
.+|+|+|||.||+..|..|.++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT
T ss_pred CcEEEECCCHHHHHHHHHHHhc
Confidence 7899999999999999998764
No 367
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=49.87 E-value=10 Score=39.25 Aligned_cols=33 Identities=27% Similarity=0.551 Sum_probs=27.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.+|+..|..|.+. | .++.++|+..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~-----g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEK-----G-------HQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----T-------CEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----C-------CcEEEEEecC
Confidence 7899999999999999887652 4 3688898864
No 368
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=49.69 E-value=9.8 Score=37.07 Aligned_cols=105 Identities=18% Similarity=0.139 Sum_probs=55.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcccccc--C-CcCCcccCCCH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDP--G-DFMGLREGASL 400 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~--~-~~~~~~~~~~L 400 (603)
.||.|+|+|..|..+|..|... |. +++++|++.-- +...++.-.... . .........+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~r~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~ 65 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----GN-------DVTLIDQWPAH------IEAIRKNGLIADFNGEEVVANLPIFSP 65 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCHHH------HHHHHHHCEEEEETTEEEEECCCEECG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEECCHHH------HHHHHhCCEEEEeCCCeeEecceeecc
Confidence 5899999999999999887653 42 68888874210 111110000000 0 00000000112
Q ss_pred HHHhccc-CCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 401 LEVVRKV-KPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 401 ~e~V~~v-kptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
.|+.+.+ +.|++| ++..+ ...+++++.++....+..+|..++|...
T Consensus 66 ~~~~~~~~~~d~vi-~~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 66 EEIDHQNEQVDLII-ALTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp GGCCTTSCCCSEEE-ECSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred hhhcccCCCCCEEE-EEecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 2222211 368776 33322 2458888888654455678888998654
No 369
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=49.60 E-value=9.4 Score=37.31 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=23.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
--++|+|||.||+..|-.+. +.|+ ++.++|+.
T Consensus 7 yDVvIIGaGpAGlsAA~~la-----r~g~-------~v~lie~~ 38 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLG-----RARK-------QIALFDNN 38 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHH-----HTTC-------CEEEEECS
T ss_pred cCEEEECCCHHHHHHHHHHH-----HCCC-------CEEEEeCC
Confidence 45899999999998775443 3454 58899975
No 370
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=49.58 E-value=15 Score=38.21 Aligned_cols=22 Identities=41% Similarity=0.653 Sum_probs=19.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQA 345 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~ 345 (603)
--|||+|||-+|+..|..|.++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhh
Confidence 4699999999999999988663
No 371
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=49.50 E-value=8 Score=37.95 Aligned_cols=36 Identities=28% Similarity=0.365 Sum_probs=27.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
..|||+|||.||+..|..+.+. .|+ ++.++|+..-+
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~----~G~-------~V~viEk~~~~ 75 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKN----PNV-------QVAIIEQSVSP 75 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS----TTS-------CEEEEESSSSC
T ss_pred cCEEEECccHHHHHHHHHHHHc----CCC-------eEEEEECCCCC
Confidence 6899999999999998877541 143 68899987543
No 372
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=49.25 E-value=10 Score=40.02 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=26.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 39 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 579999999999999977654 354 599999853
No 373
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=49.20 E-value=24 Score=35.92 Aligned_cols=47 Identities=23% Similarity=0.350 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
...+.+++..+..... ++|+|+|||..|..++.+... .|. +++.+|+
T Consensus 173 ~ta~~al~~~~~~~~g---~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~ 219 (366)
T 1yqd_A 173 ITVYSPLKYFGLDEPG---KHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVIST 219 (366)
T ss_dssp HHHHHHHHHTTCCCTT---CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHHHhcCcCCCC---CEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3345666665544345 899999998777666554432 342 5887775
No 374
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=49.17 E-value=10 Score=40.73 Aligned_cols=32 Identities=31% Similarity=0.461 Sum_probs=25.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.+|+..|-.|.. .|+ ++.++|+.
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 789999999999999988765 365 47777765
No 375
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=49.09 E-value=10 Score=38.27 Aligned_cols=49 Identities=18% Similarity=0.318 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 303 ~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
.++..+.|++..+.+. . ++|+|+|||..|...+.+.. ..|. ++|+.+|+
T Consensus 151 ~~~ta~~al~~~~~~~-g---~~VlV~GaG~vG~~a~qla~-----~~Ga------~~Vi~~~~ 199 (352)
T 3fpc_A 151 MMTTGFHGAELANIKL-G---DTVCVIGIGPVGLMSVAGAN-----HLGA------GRIFAVGS 199 (352)
T ss_dssp HHHHHHHHHHHTTCCT-T---CCEEEECCSHHHHHHHHHHH-----TTTC------SSEEEECC
T ss_pred hhHHHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHH-----HcCC------cEEEEECC
Confidence 3444556666655443 4 68999999877655544332 2454 36888776
No 376
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=49.07 E-value=10 Score=35.17 Aligned_cols=95 Identities=15% Similarity=0.212 Sum_probs=52.9
Q ss_pred ceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChh-----hhccccccCCcCCcccC
Q 007456 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA-----AAPFAKDPGDFMGLREG 397 (603)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~-----k~~fa~~~~~~~~~~~~ 397 (603)
.+|+|.|| |-.|..+++.|.+ +.|. ++++++++.- +.+... +..+..- ++ .+.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~----~~g~-------~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~--D~---~d~ 64 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLT----YTDM-------HITLYGRQLK-----TRIPPEIIDHERVTVIEG--SF---QNP 64 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHH----HCCC-------EEEEEESSHH-----HHSCHHHHTSTTEEEEEC--CT---TCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHh----cCCc-------eEEEEecCcc-----ccchhhccCCCceEEEEC--CC---CCH
Confidence 45999996 7778888877763 2453 6888887511 011111 0111110 11 122
Q ss_pred CCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEe
Q 007456 398 ASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFA 442 (603)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~ 442 (603)
.++.++++. .|++|=+.+..+.-++.+++.|.+ ..-+-|||.
T Consensus 65 ~~~~~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~-~~~~~iv~i 106 (221)
T 3r6d_A 65 GXLEQAVTN--AEVVFVGAMESGSDMASIVKALSR-XNIRRVIGV 106 (221)
T ss_dssp HHHHHHHTT--CSEEEESCCCCHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred HHHHHHHcC--CCEEEEcCCCCChhHHHHHHHHHh-cCCCeEEEE
Confidence 467888875 799997765332226778888854 333345553
No 377
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=49.06 E-value=12 Score=40.58 Aligned_cols=35 Identities=31% Similarity=0.512 Sum_probs=20.0
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+.+.+++|.|||.+|.++|..+ . +.|. +|+++++.
T Consensus 362 l~~k~vlV~GaGGig~aia~~L----~-~~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 362 LASKTVVVIGAGGAGKALAYGA----K-EKGA-------KVVIANRT 396 (523)
T ss_dssp ----CEEEECCSHHHHHHHHHH----H-HHCC--------CEEEESS
T ss_pred cCCCEEEEECCcHHHHHHHHHH----H-HCCC-------EEEEEECC
Confidence 3348999999985555554444 4 3453 48888774
No 378
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=48.70 E-value=9.1 Score=41.04 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=28.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHH-------hcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAAR-------MAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~-------~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||...|-.|...+.. ..|+ +|.++++.-
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 8 TEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 6899999999999999988774310 0354 688999864
No 379
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=48.64 E-value=8.1 Score=41.28 Aligned_cols=33 Identities=21% Similarity=0.590 Sum_probs=27.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 689999999999999887754 465 588899875
No 380
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.58 E-value=10 Score=38.70 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=27.4
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 3689999999999999888743 23 69999987543
No 381
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=48.37 E-value=12 Score=39.91 Aligned_cols=31 Identities=35% Similarity=0.474 Sum_probs=25.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEe
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD 365 (603)
.+|+|+|||.||+..|..+.+. .|. ++.++|
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 38 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATL----YGK-------RVAVVD 38 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred cCEEEECCChhHHHHHHHHHHh----cCC-------eEEEEe
Confidence 6899999999999999888661 253 699999
No 382
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=48.26 E-value=31 Score=33.99 Aligned_cols=95 Identities=19% Similarity=0.209 Sum_probs=54.9
Q ss_pred CCCceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCC
Q 007456 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGAS 399 (603)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~ 399 (603)
++..+|+|.|| |-.|..+++.|++ .|. +++.+|+..- ...+ .+..- ++ .+..+
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~~----~~~~-----~~~~~--Dl---~d~~~ 70 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRT-----QGR-------TVRGFDLRPS----GTGG-----EEVVG--SL---EDGQA 70 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHH-----TTC-------CEEEEESSCC----SSCC-----SEEES--CT---TCHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----CCC-------EEEEEeCCCC----CCCc-----cEEec--Cc---CCHHH
Confidence 44499999998 8788777777765 353 5888877521 1111 12111 11 12245
Q ss_pred HHHHhcccCCcEEEeecCCCCCC--------------CHHHHHHhhhcCCCCCeEEecC
Q 007456 400 LLEVVRKVKPHVLLGLSGVGGVF--------------NEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 400 L~e~V~~vkptvLIG~S~~~g~F--------------t~evv~~M~~~~~erPIIF~LS 444 (603)
+.++++ ++|++|=+.+....- |..+++++.+ ..-+.|||.=|
T Consensus 71 ~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~V~~SS 126 (347)
T 4id9_A 71 LSDAIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASA-AGVRRFVFASS 126 (347)
T ss_dssp HHHHHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred HHHHHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEECC
Confidence 788887 489999776543211 3457888754 55567888655
No 383
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=48.22 E-value=6.6 Score=38.95 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=26.9
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
+..|+|+|||.+|+.+|-.|.+ |. ++.++|+..
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La~------G~-------~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLSA------HG-------RVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT------TS-------CEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHhC------CC-------CEEEEECCC
Confidence 3679999999999999988752 43 689999874
No 384
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=47.91 E-value=11 Score=40.13 Aligned_cols=33 Identities=27% Similarity=0.511 Sum_probs=26.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..|.+. |. ++.+++++.
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~ 37 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARD 37 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 6799999999999999988763 43 577777653
No 385
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=47.90 E-value=25 Score=35.14 Aligned_cols=51 Identities=10% Similarity=-0.008 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 302 V~lAgll~A~r~tg~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+.++..+.+++....--.. ++++|.|| |..|..+++++.. .|. +++.+|+.
T Consensus 128 ~~~~ta~~~l~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~a~~-----~G~-------~Vi~~~~~ 179 (333)
T 1wly_A 128 LKGMTAQYLLHQTHKVKPG---DYVLIHAAAGGMGHIMVPWARH-----LGA-------TVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEETTTTSTTHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred hhHHHHHHHHHHhhCCCCC---CEEEEECCccHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 3444555566533332334 89999996 8888777766543 342 58888764
No 386
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=47.84 E-value=9.8 Score=40.06 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=26.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..+.+. |+ ++.++|+.-
T Consensus 21 ~dVvIIGgG~aGl~aA~~la~~-----G~-------~V~liE~~~ 53 (478)
T 3dk9_A 21 YDYLVIGGGSGGLASARRAAEL-----GA-------RAAVVESHK 53 (478)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecCC
Confidence 6799999999999999887653 54 689999653
No 387
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=47.76 E-value=9.8 Score=35.73 Aligned_cols=31 Identities=13% Similarity=0.382 Sum_probs=25.3
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
||+|+|+|..|..+|+.|... |. +++++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g~-------~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----KY-------GVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 799999999999999888653 43 68889864
No 388
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=47.72 E-value=22 Score=35.89 Aligned_cols=48 Identities=25% Similarity=0.338 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 303 ALAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 303 ~lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
.++..+.|++..+.+. . ++|+|.|||..|...+.+... .|. +++.+|+
T Consensus 153 ~~~ta~~al~~~~~~~-g---~~VlV~GaG~vG~~a~qla~~-----~Ga-------~Vi~~~~ 200 (352)
T 1e3j_A 153 PLSVGVHACRRAGVQL-G---TTVLVIGAGPIGLVSVLAAKA-----YGA-------FVVCTAR 200 (352)
T ss_dssp HHHHHHHHHHHHTCCT-T---CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCCCC-C---CEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEcC
Confidence 4444556666555433 4 799999998766655544332 343 3777775
No 389
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=47.56 E-value=18 Score=35.97 Aligned_cols=107 Identities=16% Similarity=0.217 Sum_probs=59.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|||+.|..+|..|.. .|.- ..++++|++---.+. .-++. +...+..+. .. ....+. +
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~-----~g~~-----~~V~l~d~~~~~~~~~~~~~~-~~~~~~~~~-~v---~~~~~~-~ 71 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQ-----RGIA-----REIVLEDIAKERVEAEVLDMQ-HGSSFYPTV-SI---DGSDDP-E 71 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEECSSHHHHHHHHHHHH-HTGGGSTTC-EE---EEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC-----CEEEEEeCChhHHHHHHHHHH-hhhhhcCCe-EE---EeCCCH-H
Confidence 689999999999999887754 3431 379999986310000 00011 101111110 00 001122 4
Q ss_pred HhcccCCcEEEeecCCCCC--------------CCHHHHHHhhhcCCCCCeEEecCCCCCc
Q 007456 403 VVRKVKPHVLLGLSGVGGV--------------FNEEVLKAMRESDSVKPAIFAMSNPTMN 449 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~--------------Ft~evv~~M~~~~~erPIIF~LSNPt~~ 449 (603)
+++. .|++|=+...+.. .-+++++.|++ +++..+|+.++||...
T Consensus 72 ~~~~--aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~-~~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 72 ICRD--ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVK-VAPNAIYMLITNPVDI 129 (319)
T ss_dssp GGTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHHH
T ss_pred HhCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCceEEEecCchHH
Confidence 5554 6887744332221 11178888865 6778899999999863
No 390
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=47.48 E-value=18 Score=38.89 Aligned_cols=45 Identities=27% Similarity=0.225 Sum_probs=31.1
Q ss_pred CcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccCCCH
Q 007456 409 PHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTA 454 (603)
Q Consensus 409 ptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE~tp 454 (603)
.+++|-.||.+--.|+++.+.+.+...... ++-+|||....|-++
T Consensus 122 g~iVV~~STv~pgtt~~l~~~l~e~~~~~d-~~v~~~Pe~a~eG~a 166 (446)
T 4a7p_A 122 PSVIVTKSTVPVGTGDEVERIIAEVAPNSG-AKVVSNPEFLREGAA 166 (446)
T ss_dssp CCEEEECSCCCTTHHHHHHHHHHHHSTTSC-CEEEECCCCCCTTSH
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCCCC-ceEEeCcccccccch
Confidence 467888898877778888777754222222 456889988777775
No 391
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=47.40 E-value=33 Score=34.82 Aligned_cols=33 Identities=21% Similarity=0.388 Sum_probs=23.3
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.++|+|.|||..|..++.++.. .|. +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-----YGL-------EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-----HTC-------EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 3899999998777766655443 242 68888864
No 392
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=47.37 E-value=9.6 Score=39.95 Aligned_cols=34 Identities=32% Similarity=0.538 Sum_probs=27.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
..|+|+|||.||+..|-.+.+ .|. ++.++|+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EGA-------NVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 569999999999999887654 353 6999998653
No 393
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=47.34 E-value=12 Score=39.26 Aligned_cols=33 Identities=30% Similarity=0.401 Sum_probs=27.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
-.++|+|||.||+..|..+.+. |. ++.++|+.-
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~-----G~-------~V~liEk~~ 36 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQL-----GL-------KTALIEKYK 36 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECCB
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC-------EEEEEeCCC
Confidence 5699999999999999887653 53 699999863
No 394
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=47.29 E-value=11 Score=40.47 Aligned_cols=32 Identities=31% Similarity=0.468 Sum_probs=25.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
..|+|+|||.+|+..|-.|.. .|+ ++.++|++
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 789999999999999988765 355 46777764
No 395
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=46.85 E-value=7.8 Score=40.41 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=27.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 5 ~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~~ 38 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGKK 38 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 579999999999999887755 354 5899998653
No 396
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=46.73 E-value=14 Score=38.62 Aligned_cols=32 Identities=34% Similarity=0.596 Sum_probs=25.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.+|+..|..|.+. |. ++.++++.
T Consensus 34 ~~v~IiGaG~~Gl~aA~~l~~~-----g~-------~v~vlE~~ 65 (498)
T 2iid_A 34 KHVVIVGAGMAGLSAAYVLAGA-----GH-------QVTVLEAS 65 (498)
T ss_dssp CEEEEECCBHHHHHHHHHHHHH-----TC-------EEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 6899999999999999988764 43 56677665
No 397
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=46.53 E-value=46 Score=33.11 Aligned_cols=102 Identities=18% Similarity=0.233 Sum_probs=58.1
Q ss_pred CCCceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCCh-hhhccccccCCcCCcccCC
Q 007456 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLREGA 398 (603)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~-~k~~fa~~~~~~~~~~~~~ 398 (603)
+...+|+|.|| |-.|..+++.|++. .| -+++.+|+.. .....+.. ....+.+- ++. .+..
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~---~~~~~~~~~~~v~~~~~--Dl~--~d~~ 83 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT---DRLGDLVKHERMHFFEG--DIT--INKE 83 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC---TTTGGGGGSTTEEEEEC--CTT--TCHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh---hhhhhhccCCCeEEEeC--ccC--CCHH
Confidence 33489999996 88888887777653 23 2688888752 11011111 11122211 110 0224
Q ss_pred CHHHHhcccCCcEEEeecCCCC----------------CCCHHHHHHhhhcCCCCCeEEecC
Q 007456 399 SLLEVVRKVKPHVLLGLSGVGG----------------VFNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g----------------~Ft~evv~~M~~~~~erPIIF~LS 444 (603)
++.+++++ +|++|=+.+... .-|..+++++.+ .. +.+||.=|
T Consensus 84 ~~~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~-~~~v~~SS 141 (372)
T 3slg_A 84 WVEYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVK-YG-KHLVFPST 141 (372)
T ss_dssp HHHHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHH-HT-CEEEEECC
T ss_pred HHHHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHH-hC-CcEEEeCc
Confidence 57788875 899997665432 234678888854 44 77888655
No 398
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=46.36 E-value=9.6 Score=39.85 Aligned_cols=22 Identities=32% Similarity=0.418 Sum_probs=18.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQA 345 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~ 345 (603)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999877654
No 399
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=46.24 E-value=11 Score=42.02 Aligned_cols=33 Identities=36% Similarity=0.567 Sum_probs=27.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|+|.||+..|..+.. .|. ++.++|+..
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~-----~g~-------~V~lie~~~ 406 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAA-----RGH-------QVTLFDAHS 406 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 789999999999999888754 343 699999864
No 400
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=46.20 E-value=11 Score=40.90 Aligned_cols=33 Identities=9% Similarity=0.354 Sum_probs=26.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..|+|+|||.+|+..|-.|.. .|+ ++.++|+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~-----~G~-------~V~vlEr~~ 59 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAH-----RQV-------GHLVVEQTD 59 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 679999999999999988765 365 477888753
No 401
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=46.16 E-value=21 Score=35.18 Aligned_cols=107 Identities=14% Similarity=0.177 Sum_probs=57.3
Q ss_pred CCCCCCceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCC-CCCCChhhhccccccCCcCCcc
Q 007456 318 LTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKE-RKNLDPAAAPFAKDPGDFMGLR 395 (603)
Q Consensus 318 l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~-r~~l~~~k~~fa~~~~~~~~~~ 395 (603)
..++.+.+|+|.|| |-.|..+++.|++ .|. +++.+|+..--... ...+. ...+..- ++ .
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g~-------~V~~~~r~~~~~~~~~~~l~--~v~~~~~--Dl---~ 75 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLP-----QGH-------EILVIDNFATGKREVLPPVA--GLSVIEG--SV---T 75 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGG-----GTC-------EEEEEECCSSSCGGGSCSCT--TEEEEEC--CT---T
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEECCCccchhhhhccC--CceEEEe--eC---C
Confidence 34455599999998 6667666666544 342 68888874110000 01110 1111111 11 1
Q ss_pred cCCCHHHHhcccCCcEEEeecCCCCC-C------------CHHHHHHhhhcCCCCCeEEecC
Q 007456 396 EGASLLEVVRKVKPHVLLGLSGVGGV-F------------NEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 396 ~~~~L~e~V~~vkptvLIG~S~~~g~-F------------t~evv~~M~~~~~erPIIF~LS 444 (603)
+..++.++++.+++|++|=+.+.... - +..+++++.+ ..-+.|||.=|
T Consensus 76 d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~-~~~~~iV~~SS 136 (330)
T 2pzm_A 76 DAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASK-AGVKRLLNFQT 136 (330)
T ss_dssp CHHHHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHH-HTCSEEEEEEE
T ss_pred CHHHHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHH-cCCCEEEEecC
Confidence 22357788876679999987764332 0 2346666643 33456887544
No 402
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=46.06 E-value=11 Score=38.36 Aligned_cols=34 Identities=32% Similarity=0.581 Sum_probs=26.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.||+..|..|.+. |. .++.++++..
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~-----g~------~~v~v~E~~~ 40 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQA-----GF------HDYTILERTD 40 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEECCC
Confidence 7899999999999999888653 41 2577777653
No 403
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=45.97 E-value=12 Score=41.57 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=27.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..|||+|||.||+.+|-.|.+ .|. ++.++|+..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLR-----RGW-------QVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 689999999999999987755 354 699999864
No 404
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=45.79 E-value=11 Score=41.27 Aligned_cols=34 Identities=26% Similarity=0.470 Sum_probs=27.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
..|||+|+|.+|+++|..+.. .|+ ++.++|+..+
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~~ 66 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQDF 66 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 569999999999999988765 365 5899997643
No 405
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=45.77 E-value=46 Score=33.81 Aligned_cols=115 Identities=13% Similarity=0.036 Sum_probs=65.0
Q ss_pred HHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcc
Q 007456 305 AGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF 384 (603)
Q Consensus 305 Agll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~f 384 (603)
++.+++..+.. ... .++.|+|+|..|-.++..+... .+. ++++++|+. .+ ......+.|
T Consensus 112 ~s~laa~~la~--~~~---~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~--~a~~la~~~ 170 (322)
T 1omo_A 112 AGGIAAKYLAR--KNS---SVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EK--AAKKFVSYC 170 (322)
T ss_dssp HHHHHHHHHSC--TTC---CEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HH--HHHHHHHHH
T ss_pred HHHHHHHhccC--CCC---CEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HH--HHHHHHHHH
Confidence 34555554432 245 8999999999988888777653 233 578888873 11 111122222
Q ss_pred ccccCCcCCcccCCCHHHHhcccCCcEEEeecCCC-CCCCHHHHHHhhhcCCCCCeEEecC--CCCCccCCCHH
Q 007456 385 AKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVG-GVFNEEVLKAMRESDSVKPAIFAMS--NPTMNAECTAA 455 (603)
Q Consensus 385 a~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~-g~Ft~evv~~M~~~~~erPIIF~LS--NPt~~aE~tpe 455 (603)
....-+ .. ..++.|++ . .|++|-++..+ ..|+.+ + ..+.-.|+.++ +|. +.|+.++
T Consensus 171 ~~~~~~---~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~----~---l~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 171 EDRGIS---AS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAE----W---VEEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp HHTTCC---EE-ECCHHHHT-S--SSEEEECCCCSSCCBCGG----G---CCTTCEEEECSCCSTT-CCCBCHH
T ss_pred HhcCce---EE-ECCHHHHh-C--CCEEEEeeCCCCceecHH----H---cCCCeEEEECCCCCCC-ccccCHH
Confidence 110000 11 45799998 5 79988665432 233322 2 23556888883 465 5588764
No 406
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=45.76 E-value=13 Score=38.40 Aligned_cols=34 Identities=21% Similarity=0.408 Sum_probs=26.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.+|+..|..|.+. .|. ++.++++..
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~----~g~-------~v~v~E~~~ 41 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQ----LDK-------RVLVLERRP 41 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH----SCC-------CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHh----CCC-------CEEEEeCCC
Confidence 6899999999999999988653 143 588888763
No 407
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=45.46 E-value=11 Score=35.88 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=23.0
Q ss_pred CCCCceEEEeCcc---hhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 320 DFADQKIVVVGAG---SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 320 dl~~~riv~~GAG---sAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
++++.++||.||+ ..|.++|+.+.+ .|. +++++|+.
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G~-------~V~~~~r~ 49 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKR-----EGA-------ELAFTYVG 49 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cCC-------CEEEEecc
Confidence 3445999999985 334445554443 453 68888876
No 408
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=45.40 E-value=8.2 Score=38.86 Aligned_cols=32 Identities=22% Similarity=0.533 Sum_probs=24.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+||-|+|-|..|.++|..|+++ |. +++.+|+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr~ 37 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNRT 37 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC---
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 6899999999999999998764 54 57777763
No 409
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=45.36 E-value=13 Score=38.32 Aligned_cols=32 Identities=25% Similarity=0.490 Sum_probs=25.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..|.+. |. ++.+++++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~ 37 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEAR 37 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECC
Confidence 6899999999999999888653 43 46777765
No 410
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=45.30 E-value=9.5 Score=39.61 Aligned_cols=32 Identities=31% Similarity=0.506 Sum_probs=24.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.+|+..|..|.+. |. ++.++++.
T Consensus 17 ~~v~iiG~G~~Gl~aa~~l~~~-----g~-------~v~v~E~~ 48 (478)
T 2ivd_A 17 MNVAVVGGGISGLAVAHHLRSR-----GT-------DAVLLESS 48 (478)
T ss_dssp CCEEEECCBHHHHHHHHHHHTT-----TC-------CEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEEcC
Confidence 6899999999999999887653 53 46666665
No 411
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=44.80 E-value=10 Score=41.36 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=26.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
--|||+|||.+|+++|..+.. .|+ ++.++++.
T Consensus 19 ~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 19 LDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 569999999999999987754 465 58899986
No 412
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=44.79 E-value=26 Score=35.79 Aligned_cols=32 Identities=28% Similarity=0.501 Sum_probs=22.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
++|+|+|||..|...+.+... .|. ++|+.+|+
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 799999999777665544432 354 46888875
No 413
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=44.77 E-value=16 Score=37.22 Aligned_cols=34 Identities=18% Similarity=0.431 Sum_probs=26.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|||+|||.||+..|..+.+ .|.+ -+|.++|++
T Consensus 5 ~dvvIIG~G~aGl~aA~~l~~-----~g~~-----~~V~lie~~ 38 (384)
T 2v3a_A 5 APLVIIGTGLAGYNLAREWRK-----LDGE-----TPLLMITAD 38 (384)
T ss_dssp CCEEEECCSHHHHHHHHHHHT-----TCSS-----SCEEEECSS
T ss_pred CcEEEECChHHHHHHHHHHHh-----hCCC-----CCEEEEECC
Confidence 679999999999999987754 3532 257888764
No 414
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=44.67 E-value=15 Score=39.04 Aligned_cols=31 Identities=32% Similarity=0.429 Sum_probs=25.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEe
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLD 365 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD 365 (603)
.+++|+|||.||+..|..+.+. .|. ++.++|
T Consensus 4 ~dvvVIGgG~aGl~aA~~la~~----~G~-------~V~liE 34 (490)
T 1fec_A 4 YDLVVIGAGSGGLEAGWNAASL----HKK-------RVAVID 34 (490)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH----HCC-------CEEEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHH----cCC-------EEEEEe
Confidence 6899999999999999988661 243 699999
No 415
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=44.65 E-value=21 Score=36.43 Aligned_cols=123 Identities=16% Similarity=0.112 Sum_probs=75.9
Q ss_pred CCccccCC---chhHHHHHHHHHHHHHHh---------CC---------CCCCCCCceEEEeCcchhHHHHHHHHHHHHH
Q 007456 289 FCMFNDDI---QGTAGVALAGLLGTVRAQ---------GL---------SLTDFADQKIVVVGAGSAGLGVLKMAVQAAA 347 (603)
Q Consensus 289 ~~~FnDDi---QGTaaV~lAgll~A~r~t---------g~---------~l~dl~~~riv~~GAGsAg~GiA~li~~~~~ 347 (603)
+.+.|--- +.+|=-+++.+|+..|-. |. .-.+|.+.+|.|+|.|..|-.+|+.+...
T Consensus 91 i~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~-- 168 (320)
T 1gdh_A 91 IKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGF-- 168 (320)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTT--
T ss_pred cEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 66666432 334445788888877631 10 11245569999999999999999887643
Q ss_pred HhcCCChhhhcCeEEEEec-CCcccCCCCCCChhhhccccccCCcCCcccCCCHHHHhcccCCcEEEeecC----CCCCC
Q 007456 348 RMAGNNDAFARNKFFLLDK-DGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSG----VGGVF 422 (603)
Q Consensus 348 ~~~Gls~~eA~~~i~lvD~-~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~V~~vkptvLIG~S~----~~g~F 422 (603)
|+ +++.+|+ .. ... .++... .....+|.|+++. .|+++=.-- ..+.+
T Consensus 169 ---G~-------~V~~~d~~~~---------~~~---~~~~~g----~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i 220 (320)
T 1gdh_A 169 ---DM-------DIDYFDTHRA---------SSS---DEASYQ----ATFHDSLDSLLSV--SQFFSLNAPSTPETRYFF 220 (320)
T ss_dssp ---TC-------EEEEECSSCC---------CHH---HHHHHT----CEECSSHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred ---CC-------EEEEECCCCc---------Chh---hhhhcC----cEEcCCHHHHHhh--CCEEEEeccCchHHHhhc
Confidence 43 6888887 41 110 111100 0012368899887 788774321 23678
Q ss_pred CHHHHHHhhhcCCCCCeEEecCC
Q 007456 423 NEEVLKAMRESDSVKPAIFAMSN 445 (603)
Q Consensus 423 t~evv~~M~~~~~erPIIF~LSN 445 (603)
+++.++.|. +.-+|.-.|.
T Consensus 221 ~~~~l~~mk----~gailIn~ar 239 (320)
T 1gdh_A 221 NKATIKSLP----QGAIVVNTAR 239 (320)
T ss_dssp SHHHHTTSC----TTEEEEECSC
T ss_pred CHHHHhhCC----CCcEEEECCC
Confidence 888888883 4668887776
No 416
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=44.62 E-value=12 Score=37.20 Aligned_cols=98 Identities=13% Similarity=0.057 Sum_probs=56.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC--CcccCCCCCCChhhhccccccCCcCCcccCCCHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD--GLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~--GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~ 401 (603)
.||.|+|+|+-|..+|..|.+. |. +++++|+. ++-...... . + +. .-..+..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~-----g~-------~V~~~~r~~~~~~~~~~~g----~--~--~~------~~~~~~~ 56 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS-----LP-------HTTLIGRHAKTITYYTVPH----A--P--AQ------DIVVKGY 56 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----CT-------TCEEEESSCEEEEEESSTT----S--C--CE------EEEEEEG
T ss_pred cEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEEeccCcEEEEecCC----e--e--cc------ceecCch
Confidence 5899999999999999888764 42 47777764 111000000 0 0 00 0001222
Q ss_pred HHh-cccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCCccC
Q 007456 402 EVV-RKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 451 (603)
Q Consensus 402 e~V-~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~~aE 451 (603)
|++ + .+|++| ++. +...++++++.++....+..+|..+.|--...|
T Consensus 57 ~~~~~--~~D~vi-lav-k~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~ 103 (294)
T 3g17_A 57 EDVTN--TFDVII-IAV-KTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLE 103 (294)
T ss_dssp GGCCS--CEEEEE-ECS-CGGGHHHHGGGHHHHEEEEEEEEECCSSCCCGG
T ss_pred HhcCC--CCCEEE-EeC-CccCHHHHHHHHHHhhCCCCEEEEeccCcccHh
Confidence 332 2 257766 443 334568888888543345668889999876544
No 417
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=44.61 E-value=6.3 Score=41.22 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=26.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|+|+|||.||+..|..|.+ .|+ ++.++|++-.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCCC
Confidence 579999999999999887754 454 5778887643
No 418
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=44.49 E-value=13 Score=38.88 Aligned_cols=32 Identities=31% Similarity=0.490 Sum_probs=25.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999888663 43 46666665
No 419
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=44.33 E-value=10 Score=42.31 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=27.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..|||+|||.||+.+|-.|.+ .|. ++.++|+..
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~-----~G~-------~V~vlEk~~ 297 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQR-----RGA-------VVTLYCADA 297 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 679999999999999987754 354 699999863
No 420
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=44.31 E-value=12 Score=39.38 Aligned_cols=32 Identities=25% Similarity=0.445 Sum_probs=26.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
-.|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~-----~G~-------~V~liEk~ 37 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAA-----LGK-------KVAIAEEF 37 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 579999999999999987754 354 68999984
No 421
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=44.06 E-value=23 Score=37.14 Aligned_cols=30 Identities=30% Similarity=0.380 Sum_probs=24.0
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
||.|+|+|..|..+|..+.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887653 3 268888874
No 422
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=43.94 E-value=24 Score=32.40 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=51.2
Q ss_pred ceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||+|.|| |-.|-.+++.|.+ .| .+++.++++.- ..+.+.. ...+.+- ++ .+..++.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~-~~~~~~~--Dl---~d~~~~~~ 63 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHPE---KIKIENE-HLKVKKA--DV---SSLDEVCE 63 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCGG---GCCCCCT-TEEEECC--CT---TCHHHHHH
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCcc---cchhccC-ceEEEEe--cC---CCHHHHHH
Confidence 58999996 6666666665544 34 36888888621 1112211 1112111 11 12346888
Q ss_pred HhcccCCcEEEeecCCCC----------CCCHHHHHHhhhcCCCCCeEEe
Q 007456 403 VVRKVKPHVLLGLSGVGG----------VFNEEVLKAMRESDSVKPAIFA 442 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g----------~Ft~evv~~M~~~~~erPIIF~ 442 (603)
+++. +|++|=+.+... ..+..+++.|.+ ..-+-+||.
T Consensus 64 ~~~~--~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~ 110 (227)
T 3dhn_A 64 VCKG--ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKK-AGVNRFLMV 110 (227)
T ss_dssp HHTT--CSEEEECCCC------CCSHHHHHHHHHHHHHHH-TTCSEEEEE
T ss_pred HhcC--CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHH-hCCCEEEEe
Confidence 8886 899997664321 024556777754 333456663
No 423
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=43.91 E-value=11 Score=44.26 Aligned_cols=34 Identities=24% Similarity=0.477 Sum_probs=27.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|+|.||+..|..|.. .|. +++.++|++.
T Consensus 188 ~~VvVIGgGpAGl~aA~~L~~-----~G~------~~Vtv~E~~~ 221 (1025)
T 1gte_A 188 AKIALLGAGPASISCASFLAR-----LGY------SDITIFEKQE 221 (1025)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSS
T ss_pred CEEEEECccHHHHHHHHHHHh-----cCC------CcEEEEeCCC
Confidence 789999999999999998765 353 2588999863
No 424
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=43.82 E-value=24 Score=33.11 Aligned_cols=99 Identities=18% Similarity=0.250 Sum_probs=52.4
Q ss_pred ceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.+|+|.|| |-.|..+++.|++ .|- -++++++++.- .-..+......+.+- ++ .+..++.+
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~~---~~~~~~~~~~~~~~~--Dl---~d~~~~~~ 84 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQPA---KIHKPYPTNSQIIMG--DV---LNHAALKQ 84 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSGG---GSCSSCCTTEEEEEC--CT---TCHHHHHH
T ss_pred cEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcChh---hhcccccCCcEEEEe--cC---CCHHHHHH
Confidence 78999996 6666666665544 341 26787777521 001111111112111 11 12346888
Q ss_pred HhcccCCcEEEeecCCCCC--CCHHHHHHhhhcCCCCCeEEecC
Q 007456 403 VVRKVKPHVLLGLSGVGGV--FNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~--Ft~evv~~M~~~~~erPIIF~LS 444 (603)
+++. .|++|=+.+.... -++.+++.|.+ ..-+-|||.=|
T Consensus 85 ~~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~-~~~~~iV~iSS 125 (236)
T 3qvo_A 85 AMQG--QDIVYANLTGEDLDIQANSVIAAMKA-CDVKRLIFVLS 125 (236)
T ss_dssp HHTT--CSEEEEECCSTTHHHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred HhcC--CCEEEEcCCCCchhHHHHHHHHHHHH-cCCCEEEEEec
Confidence 8886 6999966543322 25667888854 33344666444
No 425
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=43.64 E-value=20 Score=34.63 Aligned_cols=99 Identities=14% Similarity=0.156 Sum_probs=55.3
Q ss_pred ceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.+|+|.|| |-.|..+++.|++. ..| .+++.+|++. ....+.+ +..+.+- ++ .+..++.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~-~~~~~~~--D~---~d~~~~~~ 62 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKL---YGT-------ENVIASDIRK----LNTDVVN-SGPFEVV--NA---LDFNQIEH 62 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHH---HCG-------GGEEEEESCC----CSCHHHH-SSCEEEC--CT---TCHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHh---CCC-------CEEEEEcCCC----ccccccC-CCceEEe--cC---CCHHHHHH
Confidence 68999998 88888888777653 012 2588888641 1111100 1111111 11 12245788
Q ss_pred HhcccCCcEEEeecCCCCC---------------CCHHHHHHhhhcCCCCCeEEec
Q 007456 403 VVRKVKPHVLLGLSGVGGV---------------FNEEVLKAMRESDSVKPAIFAM 443 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~---------------Ft~evv~~M~~~~~erPIIF~L 443 (603)
+++..++|++|=+.+.... -|..+++.+.+ ..-+.+||.=
T Consensus 63 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~S 117 (312)
T 2yy7_A 63 LVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKA-KKIKKIFWPS 117 (312)
T ss_dssp HHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TSCSEEECCE
T ss_pred HHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEec
Confidence 8886789999988764321 13356677643 3445677743
No 426
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=43.56 E-value=10 Score=38.40 Aligned_cols=35 Identities=31% Similarity=0.593 Sum_probs=28.3
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
|++.+|||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 3449999999999999999988775 3 268888875
No 427
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=43.36 E-value=14 Score=35.04 Aligned_cols=91 Identities=16% Similarity=0.191 Sum_probs=55.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.||.|+|+|..|..+|..+.. .|. +++++|++- +....+++.. . ...++.++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~----------~~~~~~~~~g--~----~~~~~~~~ 80 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP----------KRTARLFPSA--A----QVTFQEEA 80 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH----------HHHHHHSBTT--S----EEEEHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----------HHHHHHHHcC--C----ceecHHHH
Confidence 789999999999999988754 343 588888641 1111222111 0 11268888
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
++. +|++|=+ ..+. ..+++++ ++. ..+.-+|.-+||+.+
T Consensus 81 ~~~--~DvVi~a-v~~~-~~~~v~~-l~~-~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 81 VSS--PEVIFVA-VFRE-HYSSLCS-LSD-QLAGKILVDVSNPTE 119 (215)
T ss_dssp TTS--CSEEEEC-SCGG-GSGGGGG-GHH-HHTTCEEEECCCCCH
T ss_pred HhC--CCEEEEC-CChH-HHHHHHH-HHH-hcCCCEEEEeCCCcc
Confidence 876 7988833 3233 3455554 322 225668888999875
No 428
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=43.20 E-value=20 Score=34.40 Aligned_cols=86 Identities=22% Similarity=0.304 Sum_probs=53.0
Q ss_pred eEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 325 riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
||+|.|| |-.|..+++.|. . | -+++.+|++.- +.+- ++ .+..++.++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~--------------~~~~--D~---~d~~~~~~~ 49 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSK--------------EFCG--DF---SNPKGVAET 49 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCS--------------SSCC--CT---TCHHHHHHH
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccc--------------cccc--cC---CCHHHHHHH
Confidence 7999998 777777777665 2 3 36888887531 1110 00 112357888
Q ss_pred hcccCCcEEEeecCCCCC----------------CCHHHHHHhhhcCCCCCeEEecC
Q 007456 404 VRKVKPHVLLGLSGVGGV----------------FNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 404 V~~vkptvLIG~S~~~g~----------------Ft~evv~~M~~~~~erPIIF~LS 444 (603)
++..++|++|=+.+.... -+..+++.+.+ ..- .+||.=|
T Consensus 50 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~SS 104 (299)
T 1n2s_A 50 VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANE-TGA-WVVHYST 104 (299)
T ss_dssp HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTT-TTC-EEEEEEE
T ss_pred HHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHH-cCC-cEEEEec
Confidence 887789999988765331 14567777643 333 4887544
No 429
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=43.14 E-value=24 Score=33.83 Aligned_cols=98 Identities=15% Similarity=0.155 Sum_probs=55.1
Q ss_pred eEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 325 riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
||+|.|| |-.|..+++.|.+ +.|. +++.++++.- .-..+.+....+.+- ++ .+..+|.++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~----~~g~-------~V~~~~R~~~---~~~~~~~~~v~~~~~--D~---~d~~~l~~~ 62 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIA----NHID-------HFHIGVRNVE---KVPDDWRGKVSVRQL--DY---FNQESMVEA 62 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHH----TTCT-------TEEEEESSGG---GSCGGGBTTBEEEEC--CT---TCHHHHHHH
T ss_pred EEEEEcCCchHHHHHHHHHhh----CCCC-------cEEEEECCHH---HHHHhhhCCCEEEEc--CC---CCHHHHHHH
Confidence 6899997 7788877777543 1242 5777776521 001111111122111 11 123468888
Q ss_pred hcccCCcEEEeecCCCCC------CCHHHHHHhhhcCCCCCeEEecC
Q 007456 404 VRKVKPHVLLGLSGVGGV------FNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 404 V~~vkptvLIG~S~~~g~------Ft~evv~~M~~~~~erPIIF~LS 444 (603)
++. .|++|=+.+.... -++.+++.|.+ ..-+.|||.=|
T Consensus 63 ~~~--~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~-~gv~~iv~~Ss 106 (289)
T 3e48_A 63 FKG--MDTVVFIPSIIHPSFKRIPEVENLVYAAKQ-SGVAHIIFIGY 106 (289)
T ss_dssp TTT--CSEEEECCCCCCSHHHHHHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred HhC--CCEEEEeCCCCccchhhHHHHHHHHHHHHH-cCCCEEEEEcc
Confidence 886 6999977764321 24678888864 44456777533
No 430
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=42.72 E-value=18 Score=34.99 Aligned_cols=35 Identities=20% Similarity=0.427 Sum_probs=22.9
Q ss_pred CCCceEEEeCcch---hHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 321 FADQKIVVVGAGS---AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 321 l~~~riv~~GAGs---Ag~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
|+++++||-||++ .|.+||+.+ . ++|. +++++|++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~l----a-~~Ga-------~Vvi~~r~ 41 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVL----D-QLGA-------KLVFTYRK 41 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHH----H-HTTC-------EEEEEESS
T ss_pred CCCCEEEEECCCCCchHHHHHHHHH----H-HCCC-------EEEEEECC
Confidence 4459999999854 334445544 4 3564 68999875
No 431
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=42.58 E-value=24 Score=38.71 Aligned_cols=37 Identities=35% Similarity=0.475 Sum_probs=27.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhc--CCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMA--GNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~--Gls~~eA~~~i~lvD~~G 368 (603)
-.|||+|||.||+..|-.|.+... +. |+ ++.++|+..
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~-~~~~G~-------~V~vlEk~~ 74 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAA-QHEKDL-------RVCLVEKAA 74 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHH-HTTCCC-------CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhccc-ccCCCC-------cEEEEeCCC
Confidence 469999999999999998877533 23 54 477787653
No 432
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=42.21 E-value=51 Score=33.54 Aligned_cols=96 Identities=13% Similarity=0.102 Sum_probs=52.2
Q ss_pred ceEEEeC-cchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~G-AGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||+++| +|..|--+++.+.+. .++ +=+..+|+++--..++ ++. .++--. + .+.+-..+|.+
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~----~~~------eLvg~vd~~~~~~~G~-d~g----el~G~~-~-~gv~v~~dl~~ 84 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRR----KDV------ELCAVLVRKGSSFVDK-DAS----ILIGSD-F-LGVRITDDPES 84 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTC----SSE------EEEEEBCCTTCTTTTS-BGG----GGTTCS-C-CSCBCBSCHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhC----CCC------EEEEEEecCCcccccc-chH----HhhccC-c-CCceeeCCHHH
Confidence 6999999 899998888877542 333 1245567654211111 111 111100 0 11123468999
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEe
Q 007456 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFA 442 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~ 442 (603)
++. +|||+|=+|. |.+. .+.++...+ +..|+|..
T Consensus 85 ll~--~aDVvIDFT~-p~a~-~~~~~~~l~--~Gv~vViG 118 (288)
T 3ijp_A 85 AFS--NTEGILDFSQ-PQAS-VLYANYAAQ--KSLIHIIG 118 (288)
T ss_dssp HTT--SCSEEEECSC-HHHH-HHHHHHHHH--HTCEEEEC
T ss_pred Hhc--CCCEEEEcCC-HHHH-HHHHHHHHH--cCCCEEEE
Confidence 887 5999998885 3332 333443322 35677754
No 433
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=42.12 E-value=31 Score=34.33 Aligned_cols=50 Identities=16% Similarity=0.156 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 302 V~lAgll~A~r~tg~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
+.++..+.|+.-...--.. ++++|.|| |..|..+++++.. .|. +++.+|+
T Consensus 132 ~~~~tA~~al~~~~~~~~g---~~vlI~Ga~g~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 182 (336)
T 4b7c_A 132 MTGMTAYFALLDVGQPKNG---ETVVISGAAGAVGSVAGQIARL-----KGC-------RVVGIAG 182 (336)
T ss_dssp HHHHHHHHHHHHTTCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred cHHHHHHHHHHHhcCCCCC---CEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 4455566666333333345 79999999 8777766655543 343 6887775
No 434
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=42.09 E-value=16 Score=38.50 Aligned_cols=33 Identities=24% Similarity=0.450 Sum_probs=26.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
-+|+|+|||.+|+..|..+.+ .|. ++.++|+..
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~-----~g~-------~v~v~E~~~ 62 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLAS-----SGQ-------RVLIVDRRP 62 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHH-----CCC-------ceEEEeccC
Confidence 689999999999999987755 343 588888853
No 435
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=41.80 E-value=5 Score=41.52 Aligned_cols=120 Identities=18% Similarity=0.179 Sum_probs=69.7
Q ss_pred ceEEEeC-cchhHHHHHHHHHHHHHHhcCC-ChhhhcCeEEEEecCC---cccCCCCCCChhhhccccccCCcCCcccCC
Q 007456 324 QKIVVVG-AGSAGLGVLKMAVQAAARMAGN-NDAFARNKFFLLDKDG---LITKERKNLDPAAAPFAKDPGDFMGLREGA 398 (603)
Q Consensus 324 ~riv~~G-AGsAg~GiA~li~~~~~~~~Gl-s~~eA~~~i~lvD~~G---Lv~~~r~~l~~~k~~fa~~~~~~~~~~~~~ 398 (603)
.||+|.| ||..|..+|.+|+. .|+ ++++- -.+.|+|... .+.-...+|.+.-.+|.++. ....
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~-~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~------~~~~ 71 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQP-IILVLLDITPMMGVLDGVLMELQDCALPLLKDV------IATD 71 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCC-EEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEE------EEES
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCC-CEEEEEeCCCccccchhhHhhhHhhhhcccCCE------EEcC
Confidence 6899999 79999888887754 333 11111 1299999852 11110012333222333221 1234
Q ss_pred CHHHHhcccCCcEEEeecCCC---CC-----------CCHHHHHHhhhcCCCCCe-EEecCCCCCccCCCHHHHhccc
Q 007456 399 SLLEVVRKVKPHVLLGLSGVG---GV-----------FNEEVLKAMRESDSVKPA-IFAMSNPTMNAECTAADAFKHA 461 (603)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~---g~-----------Ft~evv~~M~~~~~erPI-IF~LSNPt~~aE~tpeda~~wt 461 (603)
++.+++++ .|++|=+.+.+ |- ..+++++.+.+ ++.+-+ |+-.|||.. +...-+++.+
T Consensus 72 ~~~~~~~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~-~~~~~~~vivvsNPvd---~~t~~~~~~~ 143 (333)
T 5mdh_A 72 KEEIAFKD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDK-YAKKSVKVIVVGNPAN---TNCLTASKSA 143 (333)
T ss_dssp CHHHHTTT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHH-HSCTTCEEEECSSSHH---HHHHHHHHTC
T ss_pred CcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCCeEEEEcCCchH---HHHHHHHHHc
Confidence 68888988 69887444432 31 24667777754 777664 899999974 5555555544
No 436
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=41.75 E-value=38 Score=34.82 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 304 lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
++..+.|++..+.+ .. ++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 171 ~~ta~~al~~~~~~-~g---~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 218 (398)
T 2dph_A 171 LPTGFHGCVSAGVK-PG---SHVYIAGAGPVGRCAAAGARL-----LGA------ACVIVGDQ 218 (398)
T ss_dssp HHHHHHHHHHTTCC-TT---CEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred HHHHHHHHHHcCCC-CC---CEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEEcC
Confidence 33445566544433 34 799999998877666554433 243 37888875
No 437
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=41.72 E-value=75 Score=33.81 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=26.4
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|..+|..+.... .| -+++++|++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g---~G-------~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC---PE-------IRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC---TT-------SEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcC---CC-------CEEEEEECC
Confidence 58999999999999999987641 02 258888874
No 438
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=41.64 E-value=13 Score=39.91 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=25.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-----G~-------~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-----GI-------SVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 6899999999999999987653 53 57788763
No 439
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=41.45 E-value=45 Score=32.87 Aligned_cols=104 Identities=14% Similarity=0.275 Sum_probs=56.0
Q ss_pred CCCceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCCh-hhhccccccCCcCCcccCC
Q 007456 321 FADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGDFMGLREGA 398 (603)
Q Consensus 321 l~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~-~k~~fa~~~~~~~~~~~~~ 398 (603)
+...+|+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+.. .+..+..- ++ .+..
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~l~~~~~~~~~~~--Dl---~d~~ 79 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFAT--GRREHLKDHPNLTFVEG--SI---ADHA 79 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS--CCGGGSCCCTTEEEEEC--CT---TCHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCCc--cchhhHhhcCCceEEEE--eC---CCHH
Confidence 44489999996 6666666666654 34 26888887521 00011111 01111111 11 1224
Q ss_pred CHHHHhcccCCcEEEeecCCCCC--C-----------CHHHHHHhhhcCCCCCeEEecC
Q 007456 399 SLLEVVRKVKPHVLLGLSGVGGV--F-----------NEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 399 ~L~e~V~~vkptvLIG~S~~~g~--F-----------t~evv~~M~~~~~erPIIF~LS 444 (603)
++.++++..++|++|=+.+.... . +..+++.+.+ ..-+.|||.=|
T Consensus 80 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~-~~~~~iV~~SS 137 (333)
T 2q1w_A 80 LVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKK-NNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred HHHHHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHH-hCCCEEEEECc
Confidence 57788887789999977764332 1 3456677643 44457887543
No 440
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=41.33 E-value=18 Score=34.69 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=25.4
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
||.|+|+|..|..+|..+... |. .+++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-----GG------YRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----CS------CEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC-----CC------CeEEEECCC
Confidence 799999999999999988653 42 368888864
No 441
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=41.24 E-value=7.3 Score=41.61 Aligned_cols=32 Identities=25% Similarity=0.474 Sum_probs=25.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|||+|||.||+..|..+.+. .++.++|+.-
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-------------~~V~vie~~~ 140 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-------------LTVALIEERG 140 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-------------CCEEEECTTS
T ss_pred CCEEEECccHHHHHHHHHHHhc-------------CCEEEEeCCC
Confidence 5799999999999998877542 3688998764
No 442
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=41.24 E-value=39 Score=34.20 Aligned_cols=45 Identities=18% Similarity=0.277 Sum_probs=28.4
Q ss_pred HHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 307 LLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 307 ll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
.+.+++..+.+... ++++|+|||..|...+.+... .|. +++.+|+
T Consensus 168 a~~~l~~~~~~~~g---~~VlV~GaG~vG~~a~qlak~-----~Ga-------~Vi~~~~ 212 (357)
T 2cf5_A 168 VYSPLSHFGLKQPG---LRGGILGLGGVGHMGVKIAKA-----MGH-------HVTVISS 212 (357)
T ss_dssp HHHHHHHTSTTSTT---CEEEEECCSHHHHHHHHHHHH-----HTC-------EEEEEES
T ss_pred HHHHHHhcCCCCCC---CEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeC
Confidence 34556655543245 799999998877666554433 242 5887776
No 443
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=41.22 E-value=41 Score=32.52 Aligned_cols=37 Identities=24% Similarity=0.387 Sum_probs=25.0
Q ss_pred CCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 320 DFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 320 dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+|.++++||.||++ ||...|+..+. ++|. +++++|++
T Consensus 7 ~l~~k~~lVTGas~---gIG~a~a~~l~-~~G~-------~V~~~~r~ 43 (281)
T 3s55_A 7 DFEGKTALITGGAR---GMGRSHAVALA-EAGA-------DIAICDRC 43 (281)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHH-HTTC-------EEEEEECC
T ss_pred ccCCCEEEEeCCCc---hHHHHHHHHHH-HCCC-------eEEEEeCC
Confidence 34449999999753 45555666666 4564 68999885
No 444
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=41.13 E-value=9 Score=38.74 Aligned_cols=132 Identities=13% Similarity=0.089 Sum_probs=75.5
Q ss_pred ceEEEEecCccccccCCCCCCcccccchhHHHHHHhcCCCCCceeeEEeeccCCchhcccCcccccccccCCChhhhhHh
Q 007456 172 VDMIVLTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSI 251 (603)
Q Consensus 172 v~viVVTDG~rILGLGDlG~~GmgI~iGKl~LY~a~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~ 251 (603)
.++.+|||.+.=|--...--. ||. .+|+.+-+| +++.+++ . +--
T Consensus 4 Mki~IvtDSt~dl~~e~~~~~----------------~I~---vvPl~v~~~--~~~y~D~-------------~--di~ 47 (285)
T 3lup_A 4 MKLALITDTSAYLPEAIENHE----------------DVY---VLDIPIIID--GKTYIEG-------------Q--NLT 47 (285)
T ss_dssp CCEEEEEETTBCCCTTTTTCT----------------TEE---EECCCEESS--SSCCCBT-------------T--TBC
T ss_pred CCEEEEEECCCCCCHHHHHHC----------------CeE---EEEEEEEEC--CEEEecC-------------C--CCC
Confidence 468999999886643222211 344 677777664 3333322 1 122
Q ss_pred HHHHHHHHHH--hCCCeEEEeecCCCchHHHHHHHHh---h----cC--CccccCCchhHHHHHHHHHHHHHHhCCCCCC
Q 007456 252 VDEFMEAVHA--RWPKAIVQFEDFQMKWAFETLERYR---K----RF--CMFNDDIQGTAGVALAGLLGTVRAQGLSLTD 320 (603)
Q Consensus 252 vdefv~av~~--~~P~~~Iq~EDf~~~naf~iL~ryr---~----~~--~~FnDDiQGTaaV~lAgll~A~r~tg~~l~d 320 (603)
.+||.+.+++ ..|+. |.|+--++++-|+ + .+ .++..-+=||=..+ +.......+
T Consensus 48 ~~efy~~~~~~~~~p~T-------Sqps~~~~~~~f~~l~~~g~d~ii~i~iSs~LSGTy~sA--------~~a~~~~~~ 112 (285)
T 3lup_A 48 LDQYYDKLAASKELPKT-------SQPSLAELDDLLCQLEKEGYTHVLGLFIAAGISGFWQNI--------QFLIEEHPN 112 (285)
T ss_dssp HHHHHHHHHHCSSCCEE-------CCCCHHHHHHHHHHHHHTTCCEEEECCSCGGGCTHHHHH--------TTHHHHCTT
T ss_pred HHHHHHHHHhCCCCcee-------CCCCHHHHHHHHHHHHHcCCCeEEEEeCCCchhHHHHHH--------HHHHHhCCC
Confidence 6888888875 35754 2334333444443 2 22 34445555553322 222223445
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHH--HHHhcCCChhhhc
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQA--AARMAGNNDAFAR 358 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~--~~~~~Gls~~eA~ 358 (603)
.+|-++=..+++.|..-+...+ |. ++|.|.+|..
T Consensus 113 ---~~I~ViDS~~~s~g~g~~v~~A~~l~-~~G~s~eeI~ 148 (285)
T 3lup_A 113 ---LTIAFPDTKITSAPQGNLVRNALMCS-REGMDFDVIV 148 (285)
T ss_dssp ---SEEECCCCCCCHHHHHHHHHHHHHHH-TTTCCHHHHH
T ss_pred ---CCEEEEcCCchHHHHHHHHHHHHHHH-HcCCCHHHHH
Confidence 7899999988888888777665 44 6899988753
No 445
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=41.06 E-value=18 Score=37.46 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=28.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
.+|+|+|+|.||+..|..+.+. ..|. ++.++|+...+
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~---~~g~-------~V~v~e~~~~~ 102 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESSVAP 102 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSSSSC
T ss_pred CCEEEECccHHHHHHHHHHHhc---CCCC-------eEEEEecCccc
Confidence 6899999999999999887653 1143 68899986544
No 446
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=41.02 E-value=40 Score=34.22 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=21.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
++|+|+|||+.|...+.+... .|. ++|+.+|+
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 799999998777666554432 243 36888875
No 447
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=40.91 E-value=49 Score=35.90 Aligned_cols=49 Identities=12% Similarity=0.003 Sum_probs=32.7
Q ss_pred CcEEEeecCCCCCCCHHHHHHhh-hcCCCC--CeEEecCCCCCccCCCHHHH
Q 007456 409 PHVLLGLSGVGGVFNEEVLKAMR-ESDSVK--PAIFAMSNPTMNAECTAADA 457 (603)
Q Consensus 409 ptvLIG~S~~~g~Ft~evv~~M~-~~~~er--PIIF~LSNPt~~aE~tpeda 457 (603)
.+++|-.||.+--.|+++.+.+. +...-+ .=++-++||....|-++..-
T Consensus 140 g~iVV~~STv~pgtt~~v~~~ile~~~g~~~~~d~~v~~~Pe~~~~G~a~~~ 191 (478)
T 3g79_A 140 GMLVVLESTITPGTTEGMAKQILEEESGLKAGEDFALAHAPERVMVGRLLKN 191 (478)
T ss_dssp TCEEEECSCCCTTTTTTHHHHHHHHHHCCCBTTTBEEEECCCCCCTTSHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHHHhcCCCcCCceeEEeCCccCCccchhhh
Confidence 46788889988778888887553 111111 11567899998888887543
No 448
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=40.91 E-value=1.8e+02 Score=30.40 Aligned_cols=129 Identities=13% Similarity=0.199 Sum_probs=76.3
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
++|+|+++-|..|...|+...-... ..+. +-+=.+|++ ..++ ++.+.- ..... .+...|+.|
T Consensus 7 ~~~~vi~~~g~~~~~~aKta~gl~r-~~~~------~iVgvid~~---~~G~-d~ge~~-g~~~g------ipi~~~l~~ 68 (349)
T 2obn_A 7 NQRVAILLHEGTTGTIGKTGLALLR-YSEA------PIVAVIDRN---CAGQ-SLREIT-GIYRY------VPIVKSVEA 68 (349)
T ss_dssp CCCEEEECTTTSSSSSCHHHHHHHH-HCCS------CEEEEECGG---GTTS-CHHHHH-CCCSC------CCEESSHHH
T ss_pred CCcEEEEeCCCCCcHHHHHhHHhhh-cCCC------cEEEEEeCC---CCCC-cHHHhc-CCcCC------CCccCCHHH
Confidence 3899999999999888888755433 2332 345678887 3333 222211 11111 234579999
Q ss_pred HhcccCCcE-EEeecCCCCCCC----HHHHHHhhhcCCCCCeEEecCCCCCccCCCHH-HHhcccCCcEEEEcCCCCCce
Q 007456 403 VVRKVKPHV-LLGLSGVGGVFN----EEVLKAMRESDSVKPAIFAMSNPTMNAECTAA-DAFKHAGENIVFASGSPFENV 476 (603)
Q Consensus 403 ~V~~vkptv-LIG~S~~~g~Ft----~evv~~M~~~~~erPIIF~LSNPt~~aE~tpe-da~~wt~Grai~AtGSPf~pv 476 (603)
++. .+|++ +||+...+|.+. ++++++|.+ ---||=.|-+|-+ -.|| .+.... |.-|+-++-|.+..
T Consensus 69 al~-~~~d~lvig~a~~gG~l~~~~~~~i~~Al~~---G~~Vvsglh~~l~---~~pel~~~A~~-g~~i~dvr~pp~~l 140 (349)
T 2obn_A 69 ALE-YKPQVLVIGIAPKGGGIPDDYWIELKTALQA---GMSLVNGLHTPLA---NIPDLNALLQP-GQLIWDVRKEPANL 140 (349)
T ss_dssp HGG-GCCSEEEECCCCCCC-SCGGGHHHHHHHHHT---TCEEEECSSSCCT---TCHHHHHHCCT-TCCEEETTCCCSSC
T ss_pred HHh-CCCCEEEEEecCCCCCCCHHHHHHHHHHHHc---CCcEEeCccchhh---CCHHHHHHHHc-CCEEEEeccCcccc
Confidence 995 47876 678877788888 777777743 3445555554432 1222 222333 77788877766444
Q ss_pred e
Q 007456 477 D 477 (603)
Q Consensus 477 ~ 477 (603)
.
T Consensus 141 ~ 141 (349)
T 2obn_A 141 D 141 (349)
T ss_dssp C
T ss_pred c
Confidence 3
No 449
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=40.87 E-value=15 Score=38.04 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=26.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.+|+|+|||.+|+..|..|.+ .|.+ .+|.++++..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~-----~G~~-----~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR-----APCP-----PKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT-----SSSC-----CEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHh-----CCCC-----CcEEEEeCCC
Confidence 589999999999999988865 3532 1688887753
No 450
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=40.80 E-value=16 Score=37.03 Aligned_cols=32 Identities=28% Similarity=0.449 Sum_probs=25.9
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.++|.|+|+|..|-|||..+. + |. +++++|+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-----G~-------~V~v~d~~ 43 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-----KH-------EVVLQDVS 43 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-----TS-------EEEEECSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-----CC-------EEEEEECC
Confidence 378999999999999999988 6 43 57777753
No 451
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=40.57 E-value=15 Score=39.90 Aligned_cols=31 Identities=39% Similarity=0.547 Sum_probs=25.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
.+++|+|||.||+..|..+.+. |+ ++.++|+
T Consensus 108 ~dvvVIG~GpAGl~aA~~l~~~-----g~-------~v~liE~ 138 (598)
T 2x8g_A 108 YDLIVIGGGSGGLAAGKEAAKY-----GA-------KTAVLDY 138 (598)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECC
T ss_pred ccEEEECCCccHHHHHHHHHhC-----CC-------eEEEEec
Confidence 7899999999999999887653 53 5888985
No 452
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=40.47 E-value=18 Score=38.79 Aligned_cols=25 Identities=20% Similarity=0.449 Sum_probs=21.9
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHH
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQA 345 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~ 345 (603)
|+++++||+|+|..|..-+++|.++
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ 34 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEA 34 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC
Confidence 3449999999999999999999875
No 453
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=40.33 E-value=13 Score=39.63 Aligned_cols=32 Identities=25% Similarity=0.611 Sum_probs=25.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
..++|+|||.||+..|..+.+ .|+ ++.++|+.
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~-----~G~-------~V~liE~~ 40 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKK-----HTD-------KVVLIEGG 40 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TCS-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 479999999999998877654 354 68999975
No 454
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=40.26 E-value=38 Score=34.41 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=22.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 799999999777666554433 243 36887775
No 455
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=40.16 E-value=32 Score=35.57 Aligned_cols=113 Identities=19% Similarity=0.150 Sum_probs=50.9
Q ss_pred HHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccc
Q 007456 308 LGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKD 387 (603)
Q Consensus 308 l~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~ 387 (603)
|+.-.+...++++ ..||-|+|+|..|..-++.+.........+. +.+ +=+-++|++ .+.-+.+|+.
T Consensus 13 ~~~~~~~~~~Ms~--klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~-~~~-elvav~d~~----------~~~a~~~a~~ 78 (412)
T 4gqa_A 13 LGTENLYFQSMSA--RLNIGLIGSGFMGQAHADAYRRAAMFYPDLP-KRP-HLYALADQD----------QAMAERHAAK 78 (412)
T ss_dssp ------------C--EEEEEEECCSHHHHHHHHHHHHHHHHCTTSS-SEE-EEEEEECSS----------HHHHHHHHHH
T ss_pred cccccCccccccc--cceEEEEcCcHHHHHHHHHHHhccccccccC-CCe-EEEEEEcCC----------HHHHHHHHHH
Confidence 3344444444544 2699999999887665555544322000111 011 113355542 1112233332
Q ss_pred cCCcCCcccCCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhc----CCCCCe
Q 007456 388 PGDFMGLREGASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRES----DSVKPA 439 (603)
Q Consensus 388 ~~~~~~~~~~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~----~~erPI 439 (603)
-.. ..-..++.|.++.-++|+++ +++ |..+-.+++..-.++ ++|+|+
T Consensus 79 ~~~---~~~y~d~~~ll~~~~vD~V~-I~t-p~~~H~~~~~~al~aGkhVl~EKP~ 129 (412)
T 4gqa_A 79 LGA---EKAYGDWRELVNDPQVDVVD-ITS-PNHLHYTMAMAAIAAGKHVYCEKPL 129 (412)
T ss_dssp HTC---SEEESSHHHHHHCTTCCEEE-ECS-CGGGHHHHHHHHHHTTCEEEEESCS
T ss_pred cCC---CeEECCHHHHhcCCCCCEEE-ECC-CcHHHHHHHHHHHHcCCCeEeecCC
Confidence 110 01246899999988889877 555 444555554443232 355663
No 456
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=40.04 E-value=38 Score=34.29 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=22.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 192 ~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 799999998777666554433 243 36887775
No 457
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=40.01 E-value=15 Score=38.62 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=28.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
.+|+|+|||-+|+..|-.|.. .|. ++.++|++.-+
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~-----~G~-------~V~vlE~~~~~ 46 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSV-----DGK-------KVLHIDKQDHY 46 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 679999999999999888765 353 68999987554
No 458
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=39.93 E-value=36 Score=34.18 Aligned_cols=21 Identities=14% Similarity=0.387 Sum_probs=15.3
Q ss_pred CCCCCceEEEeCcchhHHHHHHHH
Q 007456 319 TDFADQKIVVVGAGSAGLGVLKMA 342 (603)
Q Consensus 319 ~dl~~~riv~~GAGsAg~GiA~li 342 (603)
.. ++|+|+|||..|...+.+.
T Consensus 170 ~g---~~VlV~GaG~vG~~aiqla 190 (344)
T 2h6e_A 170 AE---PVVIVNGIGGLAVYTIQIL 190 (344)
T ss_dssp SS---CEEEEECCSHHHHHHHHHH
T ss_pred CC---CEEEEECCCHHHHHHHHHH
Confidence 56 8999999986666554443
No 459
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=39.77 E-value=17 Score=43.21 Aligned_cols=39 Identities=26% Similarity=0.440 Sum_probs=31.2
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+.||+++|||.-|.-+++.|+.+.+ |.. -..+|.++|.+
T Consensus 425 ~~~VlvVGaGGlGsevlk~La~~Gv---~~g---~~G~i~lvD~D 463 (1015)
T 3cmm_A 425 NSKVFLVGSGAIGCEMLKNWALLGL---GSG---SDGYIVVTDND 463 (1015)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTT---TCS---TTCEEEEECCC
T ss_pred cCeEEEEecCHHHHHHHHHHHHcCc---CcC---CCCeEEEEeCC
Confidence 4899999999999999999988755 121 12589999987
No 460
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=39.65 E-value=20 Score=38.90 Aligned_cols=35 Identities=40% Similarity=0.595 Sum_probs=28.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
-.|||+|+|.||+..|-.+.+. |. ++.++|+...+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~-----G~-------~V~vlEk~~~~ 156 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKA-----GA-------NVILVDKAPFS 156 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEeCCCCC
Confidence 6799999999999998777553 54 58999987654
No 461
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=39.51 E-value=29 Score=34.00 Aligned_cols=102 Identities=19% Similarity=0.209 Sum_probs=55.5
Q ss_pred ceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccc---cccCC-cCC-cccC
Q 007456 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFA---KDPGD-FMG-LREG 397 (603)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa---~~~~~-~~~-~~~~ 397 (603)
.+|+|.|| |-.|..+++.|.+ .|. +++++|+.. .........+. ..... ... ..+.
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 67 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLA-----HGY-------DVVIADNLV------NSKREAIARIEKITGKTPAFHETDVSDE 67 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEECCCS------SSCTHHHHHHHHHHSCCCEEECCCTTCH
T ss_pred cEEEEecCCcHHHHHHHHHHHH-----CCC-------cEEEEecCC------cchHHHHHHHHhhcCCCceEEEeecCCH
Confidence 68999996 6566666665544 353 688887642 11221111110 00000 000 1123
Q ss_pred CCHHHHhcccCCcEEEeecCCCCC----------------CCHHHHHHhhhcCCCCCeEEecC
Q 007456 398 ASLLEVVRKVKPHVLLGLSGVGGV----------------FNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~----------------Ft~evv~~M~~~~~erPIIF~LS 444 (603)
.++.++++..++|++|=+.+.... -+..+++.|.+ ..-+.|||.=|
T Consensus 68 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv~~SS 129 (341)
T 3enk_A 68 RALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRE-RAVKRIVFSSS 129 (341)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred HHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEec
Confidence 467888887789999977664321 13457788854 44567888544
No 462
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=39.35 E-value=17 Score=36.74 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=24.8
Q ss_pred ceEEEeCcchhHH-HHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGL-GVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~-GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+||.|+|.|-+|+ ++|+++.+. |. ++...|.+
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~-----G~-------~V~~~D~~ 37 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA-----GF-------EVSGCDAK 37 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT-----TC-------EEEEEESS
T ss_pred cEEEEEEECHHHHHHHHHHHHhC-----CC-------EEEEEcCC
Confidence 6899999999999 488877653 43 57777764
No 463
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=39.35 E-value=22 Score=40.87 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=27.2
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|+|+|||.||+..|..|... |. ++.++++..-
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~~ 370 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNF-----GI-------KVTVLEAKDR 370 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecccc
Confidence 6899999999999999888764 43 5788887543
No 464
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=39.28 E-value=31 Score=34.43 Aligned_cols=50 Identities=14% Similarity=0.001 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 302 VALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 302 V~lAgll~A~r~tg~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
+.++..+.|+.-...--.. ++++|.|| |..|..+++++.. .|. +++.+|+
T Consensus 138 ~~~~ta~~al~~~~~~~~g---~~vlI~Ga~g~iG~~~~~~a~~-----~G~-------~V~~~~~ 188 (345)
T 2j3h_A 138 MPGMTAYAGFYEVCSPKEG---ETVYVSAASGAVGQLVGQLAKM-----MGC-------YVVGSAG 188 (345)
T ss_dssp HHHHHHHHHHHTTSCCCTT---CEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred ccHHHHHHHHHHHhCCCCC---CEEEEECCCcHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3444455555322222234 79999997 8777777655543 342 5887776
No 465
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=39.22 E-value=13 Score=37.97 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=25.3
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+++|+|||.+|+..|..+.+. |. ++.++++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~-----g~-------~v~v~E~~ 33 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL-----NK-------KVLVIEKR 33 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG-----TC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEecC
Confidence 5799999999999998877552 43 57788775
No 466
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=39.14 E-value=17 Score=34.96 Aligned_cols=35 Identities=17% Similarity=0.370 Sum_probs=22.1
Q ss_pred CCceEEEeCcc---hhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 322 ADQKIVVVGAG---SAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 322 ~~~riv~~GAG---sAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
.++++||.||+ -.|..+|+.+ . +.|. +++++|++.
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l----~-~~G~-------~V~~~~r~~ 45 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAM----H-REGA-------ELAFTYQND 45 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHH----H-HTTC-------EEEEEESST
T ss_pred CCCEEEEECCCCCCCHHHHHHHHH----H-HCCC-------EEEEEcCcH
Confidence 34899999985 3444444444 4 3453 688888763
No 467
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=39.07 E-value=38 Score=34.68 Aligned_cols=48 Identities=23% Similarity=0.258 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 304 LAGLLGTVRAQGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 304 lAgll~A~r~tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
++..+.|++..+.+ .. ++|+|+|||..|...+.+... .|. ++|+.+|+
T Consensus 171 ~~ta~~al~~~~~~-~g---~~VlV~GaG~vG~~aiqlAk~-----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 171 LPTGYHGAVTAGVG-PG---STVYVAGAGPVGLAAAASARL-----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHTTCC-TT---CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHHHHHHHcCCC-CC---CEEEEECCcHHHHHHHHHHHH-----CCC------CeEEEEcC
Confidence 34455666644332 34 799999998777665544332 354 46888876
No 468
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=39.07 E-value=47 Score=31.54 Aligned_cols=46 Identities=24% Similarity=0.353 Sum_probs=30.7
Q ss_pred CCHHHHhcccCCcEEEeecCCCCC-----------------CCHHHHHHhhhcCCCCCeEEecC
Q 007456 398 ASLLEVVRKVKPHVLLGLSGVGGV-----------------FNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 398 ~~L~e~V~~vkptvLIG~S~~~g~-----------------Ft~evv~~M~~~~~erPIIF~LS 444 (603)
.++.++++..++|++|=+.+..+. -|..+++.+.+ ..-+.+||.=|
T Consensus 51 ~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~-~~~~~~v~~SS 113 (319)
T 4b8w_A 51 AQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFE-VGARKVVSCLS 113 (319)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEECC
T ss_pred HHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEEcc
Confidence 458888988889999988765431 12346777754 44456888444
No 469
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=38.93 E-value=72 Score=31.89 Aligned_cols=89 Identities=18% Similarity=0.123 Sum_probs=49.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEV 403 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e~ 403 (603)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ .+..+.+++... .....++.|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----------~~~~~~~a~~~g----~~~~~~~~~~ 60 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAA----NPDL------ELVVIADPF----------IEGAQRLAEANG----AEAVASPDEV 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS----------HHHHHHHHHTTT----CEEESSHHHH
T ss_pred eEEEEECCcHHHHHHHHHHHh----CCCc------EEEEEECCC----------HHHHHHHHHHcC----CceeCCHHHH
Confidence 699999999988766655433 1221 123356653 111223333211 0134689999
Q ss_pred hcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeE
Q 007456 404 VRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAI 440 (603)
Q Consensus 404 V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPII 440 (603)
++.-++|+++ +++ |.....++++...+ ..++|+
T Consensus 61 l~~~~~D~V~-i~t-p~~~h~~~~~~al~--~gk~v~ 93 (344)
T 3euw_A 61 FARDDIDGIV-IGS-PTSTHVDLITRAVE--RGIPAL 93 (344)
T ss_dssp TTCSCCCEEE-ECS-CGGGHHHHHHHHHH--TTCCEE
T ss_pred hcCCCCCEEE-EeC-CchhhHHHHHHHHH--cCCcEE
Confidence 9977789887 444 44555565555433 235555
No 470
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=38.92 E-value=19 Score=34.52 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=25.3
Q ss_pred CCCCceEEEeCc-ch-hHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 320 DFADQKIVVVGA-GS-AGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 320 dl~~~riv~~GA-Gs-Ag~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
+|.++++||.|| |+ .|..+|+.+++ .|. +++++|++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G~-------~V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EGA-------DVVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CCC-------EEEEecCC
Confidence 345599999999 64 67667766654 353 68888875
No 471
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=38.89 E-value=12 Score=39.43 Aligned_cols=35 Identities=20% Similarity=0.402 Sum_probs=26.1
Q ss_pred CCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 322 ADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 322 ~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..+||+|+|.|.+|++.|+.+.+ .|. ++...|++-
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~ 38 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRM 38 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCC
Confidence 34899999999999999866543 454 466777753
No 472
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=38.89 E-value=55 Score=31.90 Aligned_cols=81 Identities=16% Similarity=0.246 Sum_probs=42.9
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCc---C-Cccc
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDF---M-GLRE 396 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~---~-~~~~ 396 (603)
|.+.++||.||++ ||...|+..+. ++|. +++++|++- +.+......+....... . ...+
T Consensus 30 l~gk~~lVTGas~---GIG~aia~~la-~~G~-------~V~~~~r~~------~~~~~~~~~~~~~~~~~~~~~~Dl~d 92 (276)
T 3r1i_A 30 LSGKRALITGAST---GIGKKVALAYA-EAGA-------QVAVAARHS------DALQVVADEIAGVGGKALPIRCDVTQ 92 (276)
T ss_dssp CTTCEEEEESTTS---HHHHHHHHHHH-HTTC-------EEEEEESSG------GGGHHHHHHHHHTTCCCEEEECCTTC
T ss_pred CCCCEEEEeCCCC---HHHHHHHHHHH-HCCC-------EEEEEeCCH------HHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence 4449999999853 44455556555 4563 688888741 12333222221111000 0 0012
Q ss_pred CCCHHHHhccc-----CCcEEEeecCC
Q 007456 397 GASLLEVVRKV-----KPHVLLGLSGV 418 (603)
Q Consensus 397 ~~~L~e~V~~v-----kptvLIG~S~~ 418 (603)
..++.++++.+ ++|+||=..+.
T Consensus 93 ~~~v~~~~~~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 93 PDQVRGMLDQMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 23466666655 79999966654
No 473
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=38.84 E-value=17 Score=39.36 Aligned_cols=35 Identities=37% Similarity=0.652 Sum_probs=28.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLI 370 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv 370 (603)
..|||+|+|.||+..|-.+.+ .|. ++.++|+...+
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~-----~G~-------~V~vlEk~~~~ 161 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATD-----SGA-------KVILIEKEPVI 161 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------cEEEEeCCCCC
Confidence 679999999999999877654 354 58899987654
No 474
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=38.79 E-value=16 Score=40.84 Aligned_cols=38 Identities=26% Similarity=0.406 Sum_probs=27.8
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..|||+|||.+|+..|-.|.....+..|+ ++.++|++.
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi-------~v~viE~~~ 46 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDL-------KVRIIDKRS 46 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTC-------CEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCC-------CEEEEeCCC
Confidence 57999999999999998876621111465 588888753
No 475
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=38.69 E-value=11 Score=41.44 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=26.1
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+|||+|||.||+..|-.|.+ .|+ ++.++|+.
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~-----~G~-------kV~VlEr~ 139 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQ-----MGF-------NPIIVERG 139 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHH-----TTC-------CCEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEEcc
Confidence 679999999999999987765 465 57788876
No 476
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=38.63 E-value=31 Score=31.76 Aligned_cols=93 Identities=18% Similarity=0.242 Sum_probs=48.7
Q ss_pred eEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCccc-CCCHHH
Q 007456 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLRE-GASLLE 402 (603)
Q Consensus 325 riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~-~~~L~e 402 (603)
||+|.|| |-.|..+++.|++ .|. +++.++++.- ....+ .+..+.+- ++ .+ ..++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g~-------~V~~~~R~~~---~~~~~--~~~~~~~~--D~---~d~~~~~~~ 59 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TDY-------QIYAGARKVE---QVPQY--NNVKAVHF--DV---DWTPEEMAK 59 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SSC-------EEEEEESSGG---GSCCC--TTEEEEEC--CT---TSCHHHHHT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEECCcc---chhhc--CCceEEEe--cc---cCCHHHHHH
Confidence 7899995 5555555555443 452 6888888631 11111 11112111 11 12 235777
Q ss_pred HhcccCCcEEEeecCCCCC--------CCHHHHHHhhhcCCCCCeEEe
Q 007456 403 VVRKVKPHVLLGLSGVGGV--------FNEEVLKAMRESDSVKPAIFA 442 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~--------Ft~evv~~M~~~~~erPIIF~ 442 (603)
+++. +|++|=+.+.... -+..+++.|.+ ..-+.|||.
T Consensus 60 ~~~~--~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~-~~~~~iv~~ 104 (219)
T 3dqp_A 60 QLHG--MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEK-AEVKRFILL 104 (219)
T ss_dssp TTTT--CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHH-TTCCEEEEE
T ss_pred HHcC--CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHH-hCCCEEEEE
Confidence 7775 8999977764321 14567777743 333445553
No 477
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=38.56 E-value=72 Score=31.93 Aligned_cols=84 Identities=15% Similarity=0.114 Sum_probs=51.9
Q ss_pred CceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHH
Q 007456 323 DQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLL 401 (603)
Q Consensus 323 ~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~ 401 (603)
+.||+++|+ |..|--+++.+.+ .|. +-++.+|.+.- + . ..+ +.+-..|+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~-----~g~------~~V~~V~p~~~---g-~------~~~--------G~~vy~sl~ 57 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIA-----YGT------KMVGGVTPGKG---G-T------THL--------GLPVFNTVR 57 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---T-C------EET--------TEEEESSHH
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCC------eEEEEeCCCcc---c-c------eeC--------CeeccCCHH
Confidence 379999999 9887666665443 243 24677776411 0 0 000 011246799
Q ss_pred HHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCC
Q 007456 402 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKP 438 (603)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erP 438 (603)
|+.+..++|+.|=++ |..+..++++...+ ..-+.
T Consensus 58 el~~~~~~D~viI~t--P~~~~~~~~~ea~~-~Gi~~ 91 (288)
T 2nu8_A 58 EAVAATGATASVIYV--PAPFCKDSILEAID-AGIKL 91 (288)
T ss_dssp HHHHHHCCCEEEECC--CGGGHHHHHHHHHH-TTCSE
T ss_pred HHhhcCCCCEEEEec--CHHHHHHHHHHHHH-CCCCE
Confidence 998855689887443 56788899888765 34343
No 478
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=38.55 E-value=41 Score=33.53 Aligned_cols=40 Identities=15% Similarity=0.210 Sum_probs=25.3
Q ss_pred CCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 317 SLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 317 ~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
++.+|.++++||.||++ ||...|+..+. ++|. +++++|+.
T Consensus 40 ~m~~l~gk~~lVTGas~---GIG~aia~~la-~~G~-------~Vv~~~~~ 79 (317)
T 3oec_A 40 RMNRLQGKVAFITGAAR---GQGRTHAVRLA-QDGA-------DIVAIDLC 79 (317)
T ss_dssp --CTTTTCEEEESSCSS---HHHHHHHHHHH-HTTC-------EEEEEECC
T ss_pred hhhccCCCEEEEeCCCc---HHHHHHHHHHH-HCCC-------eEEEEecc
Confidence 34445559999999853 45555666665 4564 68888864
No 479
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=38.45 E-value=42 Score=33.24 Aligned_cols=50 Identities=18% Similarity=0.076 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhCCCCCCCCCceEEEeC-cchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 303 ALAGLLGTVRAQGLSLTDFADQKIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 303 ~lAgll~A~r~tg~~l~dl~~~riv~~G-AGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.++..+.|++....--.. ++++|.| +|..|..+++++... |. +++.+|+.
T Consensus 124 ~~~ta~~al~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~a~~~-----G~-------~V~~~~~~ 174 (327)
T 1qor_A 124 KGLTVYYLLRKTYEIKPD---EQFLFHAAAGGVGLIACQWAKAL-----GA-------KLIGTVGT 174 (327)
T ss_dssp HHHHHHHHHHTTSCCCTT---CEEEESSTTBHHHHHHHHHHHHH-----TC-------EEEEEESS
T ss_pred HHHHHHHHHHHhhCCCCC---CEEEEECCCCHHHHHHHHHHHHc-----CC-------EEEEEeCC
Confidence 344455556522222234 7999999 587777776665442 42 58887763
No 480
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=38.42 E-value=1e+02 Score=29.74 Aligned_cols=75 Identities=24% Similarity=0.308 Sum_probs=40.6
Q ss_pred CCCceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCH
Q 007456 321 FADQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASL 400 (603)
Q Consensus 321 l~~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L 400 (603)
+.++++||.||++ ||...|+..+. ++|. +++++|++.- .+......+.-|-. +..++
T Consensus 12 ~~~k~vlVTGas~---GIG~aia~~l~-~~G~-------~V~~~~r~~~------~~~~~~~~~~~Dv~------~~~~v 68 (269)
T 3vtz_A 12 FTDKVAIVTGGSS---GIGLAVVDALV-RYGA-------KVVSVSLDEK------SDVNVSDHFKIDVT------NEEEV 68 (269)
T ss_dssp TTTCEEEESSTTS---HHHHHHHHHHH-HTTC-------EEEEEESCC--------CTTSSEEEECCTT------CHHHH
T ss_pred CCCCEEEEeCCCC---HHHHHHHHHHH-HCCC-------EEEEEeCCch------hccCceeEEEecCC------CHHHH
Confidence 4449999999854 45555666665 4564 6888886521 11111111111211 12345
Q ss_pred HHHhccc-----CCcEEEeecCC
Q 007456 401 LEVVRKV-----KPHVLLGLSGV 418 (603)
Q Consensus 401 ~e~V~~v-----kptvLIG~S~~ 418 (603)
.++++.+ ++|+||=..+.
T Consensus 69 ~~~~~~~~~~~g~iD~lv~nAg~ 91 (269)
T 3vtz_A 69 KEAVEKTTKKYGRIDILVNNAGI 91 (269)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCc
Confidence 5556554 79999966654
No 481
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=38.24 E-value=16 Score=40.12 Aligned_cols=32 Identities=31% Similarity=0.422 Sum_probs=25.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
..|+|+|||.+|+..|-.|.. .|+ ++.++|+.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~-----~G~-------~V~VlEr~ 81 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRA-----GGV-------GALVLEKL 81 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEBSC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEcCC
Confidence 579999999999999988765 365 58888875
No 482
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=38.16 E-value=48 Score=32.67 Aligned_cols=88 Identities=13% Similarity=0.079 Sum_probs=46.9
Q ss_pred ceEEEeCcchhHHH-HHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhccccccCCcCCcccCCCHHH
Q 007456 324 QKIVVVGAGSAGLG-VLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPFAKDPGDFMGLREGASLLE 402 (603)
Q Consensus 324 ~riv~~GAGsAg~G-iA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~fa~~~~~~~~~~~~~~L~e 402 (603)
.||.|+|+|..|.. .++.+.. ..|. +-+.++|++ .+.-+.+++... .+...++.|
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~----~~~~------~l~av~d~~----------~~~~~~~a~~~~----~~~~~~~~~ 62 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTK----SERF------EFVGAFTPN----------KVKREKICSDYR----IMPFDSIES 62 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTS----CSSS------EEEEEECSC----------HHHHHHHHHHHT----CCBCSCHHH
T ss_pred CcEEEEecCHHHHHHHHHHHHh----CCCe------EEEEEECCC----------HHHHHHHHHHcC----CCCcCCHHH
Confidence 79999999988764 4444422 1221 123366653 111223332211 012568999
Q ss_pred HhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEE
Q 007456 403 VVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (603)
Q Consensus 403 ~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF 441 (603)
+++ ++|+++ +++ |.....++++...+ ..++|+.
T Consensus 63 ll~--~~D~V~-i~t-p~~~h~~~~~~al~--~gk~vl~ 95 (308)
T 3uuw_A 63 LAK--KCDCIF-LHS-STETHYEIIKILLN--LGVHVYV 95 (308)
T ss_dssp HHT--TCSEEE-ECC-CGGGHHHHHHHHHH--TTCEEEE
T ss_pred HHh--cCCEEE-EeC-CcHhHHHHHHHHHH--CCCcEEE
Confidence 998 689988 554 44455555554333 3455553
No 483
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=38.09 E-value=40 Score=34.12 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=26.1
Q ss_pred HHHHHHH--hCCCCCCCCCceEEEeCcchhHHHHHHHHHHHHHHhc-CCChhhhcCeEEEEec
Q 007456 307 LLGTVRA--QGLSLTDFADQKIVVVGAGSAGLGVLKMAVQAAARMA-GNNDAFARNKFFLLDK 366 (603)
Q Consensus 307 ll~A~r~--tg~~l~dl~~~riv~~GAGsAg~GiA~li~~~~~~~~-Gls~~eA~~~i~lvD~ 366 (603)
.+.+++. .+.+ .. ++|+|+|||..|...+.+.. + . |. +++.+|+
T Consensus 173 a~~al~~~~~~~~-~g---~~VlV~GaG~vG~~avqlak-~----~~Ga-------~Vi~~~~ 219 (359)
T 1h2b_A 173 AYRAVKKAARTLY-PG---AYVAIVGVGGLGHIAVQLLK-V----MTPA-------TVIALDV 219 (359)
T ss_dssp HHHHHHHHHTTCC-TT---CEEEEECCSHHHHHHHHHHH-H----HCCC-------EEEEEES
T ss_pred HHHHHHhhccCCC-CC---CEEEEECCCHHHHHHHHHHH-H----cCCC-------eEEEEeC
Confidence 4555655 3332 34 79999999866655544332 2 3 42 5888775
No 484
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=37.86 E-value=13 Score=41.19 Aligned_cols=34 Identities=18% Similarity=0.372 Sum_probs=25.9
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDG 368 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~G 368 (603)
..|||+|||.+|+..|-.|... .|+ ++.++|+..
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~----~G~-------~V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAF----PDI-------RTCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC----TTS-------CEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHh----CCC-------CEEEEeCCC
Confidence 5799999999999998877540 354 577888753
No 485
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=37.70 E-value=20 Score=35.10 Aligned_cols=111 Identities=15% Similarity=0.068 Sum_probs=55.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCCh-hhhccccccCC-cCCcccCCCHH
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDP-AAAPFAKDPGD-FMGLREGASLL 401 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~-~k~~fa~~~~~-~~~~~~~~~L~ 401 (603)
.||.|+|+|..|..+|..|.++.....|. .+++++|+..-+ +.+.. ........... ........+-.
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~------~~V~~~~r~~~~----~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 78 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGL------LEVSWIARGAHL----EAIRAAGGLRVVTPSRDFLARPTCVTDNP 78 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSS------EEEEEECCHHHH----HHHHHHTSEEEECSSCEEEECCSEEESCH
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCC------CCEEEEEcHHHH----HHHHhcCCeEEEeCCCCeEEecceEecCc
Confidence 48999999999999999887652101130 268888762110 00111 00000000000 00000011223
Q ss_pred HHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 402 EVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 402 e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
++++. .|++| ++..+.. .+++++.++....+..+|..++|-..
T Consensus 79 ~~~~~--~D~vi-l~vk~~~-~~~v~~~i~~~l~~~~~iv~~~nG~~ 121 (317)
T 2qyt_A 79 AEVGT--VDYIL-FCTKDYD-MERGVAEIRPMIGQNTKILPLLNGAD 121 (317)
T ss_dssp HHHCC--EEEEE-ECCSSSC-HHHHHHHHGGGEEEEEEEEECSCSSS
T ss_pred cccCC--CCEEE-EecCccc-HHHHHHHHHhhcCCCCEEEEccCCCC
Confidence 44544 67766 3332333 48899888542334557777888754
No 486
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=37.63 E-value=49 Score=32.02 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=23.7
Q ss_pred CceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 323 DQKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 323 ~~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
++++||.||++ ||...|+..+. ++|. +++++|++
T Consensus 11 ~k~~lVTGas~---gIG~aia~~la-~~G~-------~V~~~~~~ 44 (286)
T 3uve_A 11 GKVAFVTGAAR---GQGRSHAVRLA-QEGA-------DIIAVDIC 44 (286)
T ss_dssp TCEEEEESTTS---HHHHHHHHHHH-HTTC-------EEEEEECC
T ss_pred CCEEEEeCCCc---hHHHHHHHHHH-HCCC-------eEEEEecc
Confidence 39999999864 45555555555 4564 68999886
No 487
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=37.59 E-value=13 Score=42.14 Aligned_cols=32 Identities=28% Similarity=0.437 Sum_probs=26.0
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
-.|+|+|||.||+..|-.+.. .|+ ++.++++.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr-----~G~-------kVlLIEk~ 59 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAAR-----MGA-------KTAMFVLN 59 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEec
Confidence 579999999999999877655 354 58889876
No 488
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=37.50 E-value=1e+02 Score=31.22 Aligned_cols=41 Identities=7% Similarity=-0.013 Sum_probs=27.1
Q ss_pred CCCHHHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEE
Q 007456 397 GASLLEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIF 441 (603)
Q Consensus 397 ~~~L~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF 441 (603)
..++.|.++.-++|+++ +.+ |..+..++++...+ ..++|+.
T Consensus 72 ~~~~~~ll~~~~iD~V~-i~t-p~~~h~~~~~~al~--~Gk~V~~ 112 (383)
T 3oqb_A 72 TTDLDAALADKNDTMFF-DAA-TTQARPGLLTQAIN--AGKHVYC 112 (383)
T ss_dssp ESCHHHHHHCSSCCEEE-ECS-CSSSSHHHHHHHHT--TTCEEEE
T ss_pred cCCHHHHhcCCCCCEEE-ECC-CchHHHHHHHHHHH--CCCeEEE
Confidence 47899999988889887 554 44566666554433 3456554
No 489
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=37.45 E-value=38 Score=33.64 Aligned_cols=52 Identities=17% Similarity=0.043 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 301 GVALAGLLGTVRAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 301 aV~lAgll~A~r~tg~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+.++..+.|+.-....-.. ++++|.|| |..|..+++++.. .|. +++.+|+.
T Consensus 127 ~~~~~ta~~al~~~~~~~~g---~~vlV~Ga~ggiG~~~~~~~~~-----~G~-------~V~~~~~~ 179 (333)
T 1v3u_A 127 GMPGLTAYFGLLEVCGVKGG---ETVLVSAAAGAVGSVVGQIAKL-----KGC-------KVVGAAGS 179 (333)
T ss_dssp SHHHHHHHHHHHTTSCCCSS---CEEEEESTTBHHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred CChHHHHHHHHHHhhCCCCC---CEEEEecCCCcHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 34445555566333232335 79999998 7777776665543 342 68888753
No 490
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=37.42 E-value=18 Score=33.37 Aligned_cols=96 Identities=13% Similarity=0.190 Sum_probs=57.6
Q ss_pred eEEEeC-cchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChhhhcc---ccccCCcCCcccCCCH
Q 007456 325 KIVVVG-AGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPAAAPF---AKDPGDFMGLREGASL 400 (603)
Q Consensus 325 riv~~G-AGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~k~~f---a~~~~~~~~~~~~~~L 400 (603)
||+|+| +|..|..+|..+.+ .|. +++++|++- + .+...++.+ ... .+. ...++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g~-------~V~~~~r~~----~--~~~~~~~~~~~~~~~-~~~----~~~~~ 58 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LGH-------EIVVGSRRE----E--KAEAKAAEYRRIAGD-ASI----TGMKN 58 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TTC-------EEEEEESSH----H--HHHHHHHHHHHHHSS-CCE----EEEEH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----H--HHHHHHHHhcccccc-CCC----ChhhH
Confidence 799999 99999999888754 342 688888741 0 111111111 000 011 12468
Q ss_pred HHHhcccCCcEEEeecCCCCCCCHHHHHHhhhcCCCCCeEEecCCCCC
Q 007456 401 LEVVRKVKPHVLLGLSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTM 448 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g~Ft~evv~~M~~~~~erPIIF~LSNPt~ 448 (603)
.++++. .|++|=+. .+. ..+++++.+.... +..+|.-+||+.+
T Consensus 59 ~~~~~~--~D~Vi~~~-~~~-~~~~~~~~l~~~~-~~~~vi~~~~g~~ 101 (212)
T 1jay_A 59 EDAAEA--CDIAVLTI-PWE-HAIDTARDLKNIL-REKIVVSPLVPVS 101 (212)
T ss_dssp HHHHHH--CSEEEECS-CHH-HHHHHHHHTHHHH-TTSEEEECCCCEE
T ss_pred HHHHhc--CCEEEEeC-Chh-hHHHHHHHHHHHc-CCCEEEEcCCCcC
Confidence 888887 79888443 232 3567777764322 4678999999765
No 491
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=37.40 E-value=17 Score=39.47 Aligned_cols=32 Identities=31% Similarity=0.674 Sum_probs=26.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|+|..|.|||..+..+ |. +++++|++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 37 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH-----GH-------QVLLYDIS 37 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 6899999999999999988764 54 58888864
No 492
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=37.20 E-value=20 Score=35.87 Aligned_cols=31 Identities=23% Similarity=0.275 Sum_probs=24.7
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.||.|+|||+-|..+|..|. . | .+++++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~-----g-------~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L-----Y-------HDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-----T-------SEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-c-----C-------CceEEEECC
Confidence 68999999999999988876 3 2 267777764
No 493
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=37.20 E-value=17 Score=41.33 Aligned_cols=35 Identities=34% Similarity=0.546 Sum_probs=28.5
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCc
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGL 369 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GL 369 (603)
.+|||+|||.+|+.+|..|.+ .|. .++.++|+..+
T Consensus 5 ~dVvIIGgGi~Gls~A~~La~-----~G~------~~V~vlE~~~~ 39 (830)
T 1pj5_A 5 PRIVIIGAGIVGTNLADELVT-----RGW------NNITVLDQGPL 39 (830)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSCT
T ss_pred CCEEEECcCHHHHHHHHHHHh-----CCC------CcEEEEeCCCC
Confidence 679999999999999988765 353 26999998765
No 494
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=37.07 E-value=41 Score=30.32 Aligned_cols=46 Identities=15% Similarity=0.177 Sum_probs=34.9
Q ss_pred hcCCCCCceeeEEeeccCCchhcccCcccccccccCCChhhhhHhHHHHHHHHHHhCCCeEEE
Q 007456 207 AAGINPQRILPVMLDVGTNNQKLLEDRLYLGLRQPRLEGEEYLSIVDEFMEAVHARWPKAIVQ 269 (603)
Q Consensus 207 ~gGI~P~~~lPV~LDvGTnN~~Ll~DP~YlG~r~~R~~g~~Y~~~vdefv~av~~~~P~~~Iq 269 (603)
...-+|+- |+|..|||. . ..+-++|.+-++++++.+++..|++.|-
T Consensus 70 ~~~~~pd~---Vvi~~G~ND------~--------~~~~~~~~~~l~~ii~~l~~~~p~~~ii 115 (200)
T 4h08_A 70 LKNTKFDV---IHFNNGLHG------F--------DYTEEEYDKSFPKLIKIIRKYAPKAKLI 115 (200)
T ss_dssp HHHSCCSE---EEECCCSSC------T--------TSCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HhcCCCCe---EEEEeeeCC------C--------CCCHHHHHHHHHHHHHHHhhhCCCccEE
Confidence 34455543 678999974 1 2467999999999999999999987443
No 495
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=37.01 E-value=20 Score=34.63 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=24.8
Q ss_pred eEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 325 KIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 325 riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-----GH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 799999999999999887653 43 58888864
No 496
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=36.74 E-value=54 Score=35.11 Aligned_cols=52 Identities=12% Similarity=0.078 Sum_probs=37.5
Q ss_pred cccCC-cEEEeecCCCCCCCHHHHHHhhhcCCCCCe-----EEecCCCCCccCCCHHHHhc
Q 007456 405 RKVKP-HVLLGLSGVGGVFNEEVLKAMRESDSVKPA-----IFAMSNPTMNAECTAADAFK 459 (603)
Q Consensus 405 ~~vkp-tvLIG~S~~~g~Ft~evv~~M~~~~~erPI-----IF~LSNPt~~aE~tpeda~~ 459 (603)
+..+| +++|-.||.+--.|+++.+.+.+ +++. ++-+|||....|-++++-..
T Consensus 117 ~~l~~g~iVV~~STV~pgtt~~v~~~i~e---~~g~~~~~d~~v~~~Pe~~~~G~A~~~~~ 174 (431)
T 3ojo_A 117 PFLKKGNTIIVESTIAPKTMDDFVKPVIE---NLGFTIGEDIYLVHCPERVLPGKILEELV 174 (431)
T ss_dssp GGCCTTEEEEECSCCCTTHHHHTHHHHHH---TTTCCBTTTEEEEECCCCCCTTSHHHHHH
T ss_pred HhCCCCCEEEEecCCChhHHHHHHHHHHH---HcCCCcCCCeEEEECCCcCCCcchhhccc
Confidence 33444 57788899887789998887654 3443 67899999888888765554
No 497
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=36.62 E-value=55 Score=32.42 Aligned_cols=32 Identities=22% Similarity=0.301 Sum_probs=21.7
Q ss_pred ceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 324 QKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 324 ~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
.+++|+|| |..|...+.+... .|. +++.+|+.
T Consensus 152 ~~VlV~Ga~G~vG~~~~q~a~~-----~Ga-------~vi~~~~~ 184 (330)
T 1tt7_A 152 GSVLVTGATGGVGGIAVSMLNK-----RGY-------DVVASTGN 184 (330)
T ss_dssp CCEEEESTTSHHHHHHHHHHHH-----HTC-------CEEEEESS
T ss_pred ceEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 38999998 8888766655443 242 47777763
No 498
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=36.48 E-value=40 Score=34.29 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=21.6
Q ss_pred ceEEEeCcchhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEec
Q 007456 324 QKIVVVGAGSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDK 366 (603)
Q Consensus 324 ~riv~~GAGsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~ 366 (603)
++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKI-----AGA------SRIIAIDI 228 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 799999998777655544332 353 36887775
No 499
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=36.42 E-value=41 Score=33.89 Aligned_cols=57 Identities=18% Similarity=0.208 Sum_probs=33.1
Q ss_pred hhHHHHHHHHHHHH-HHhCCCCCCCCCceEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecC
Q 007456 298 GTAGVALAGLLGTV-RAQGLSLTDFADQKIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKD 367 (603)
Q Consensus 298 GTaaV~lAgll~A~-r~tg~~l~dl~~~riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~ 367 (603)
++-.+.++..+.|+ +..+.+... .++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~--~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGS--NKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTS--CCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCC--ccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33334455555666 444433220 168999998 8777766655443 353 368888863
No 500
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=36.41 E-value=19 Score=34.34 Aligned_cols=96 Identities=17% Similarity=0.246 Sum_probs=52.0
Q ss_pred eEEEeCc-chhHHHHHHHHHHHHHHhcCCChhhhcCeEEEEecCCcccCCCCCCChh---hhccccccCCcCCcccCCCH
Q 007456 325 KIVVVGA-GSAGLGVLKMAVQAAARMAGNNDAFARNKFFLLDKDGLITKERKNLDPA---AAPFAKDPGDFMGLREGASL 400 (603)
Q Consensus 325 riv~~GA-GsAg~GiA~li~~~~~~~~Gls~~eA~~~i~lvD~~GLv~~~r~~l~~~---k~~fa~~~~~~~~~~~~~~L 400 (603)
||+|.|| |-.|..+++.|.+. ..| -+++.++++. +..... ...+.+- ++ .+..++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~------~~~~~~~~~~~~~~~~--D~---~d~~~~ 59 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP------AKAQALAAQGITVRQA--DY---GDEAAL 59 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT------TTCHHHHHTTCEEEEC--CT---TCHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh------HhhhhhhcCCCeEEEc--CC---CCHHHH
Confidence 5889997 77777776666542 013 2588888741 112111 1111111 11 122467
Q ss_pred HHHhcccCCcEEEeecCCCC----CCCHHHHHHhhhcCCCCCeEEecC
Q 007456 401 LEVVRKVKPHVLLGLSGVGG----VFNEEVLKAMRESDSVKPAIFAMS 444 (603)
Q Consensus 401 ~e~V~~vkptvLIG~S~~~g----~Ft~evv~~M~~~~~erPIIF~LS 444 (603)
.++++. +|++|=+.+... ..+..+++.|.+ ..-+.|||.=|
T Consensus 60 ~~~~~~--~d~vi~~a~~~~~~~~~~~~~l~~a~~~-~~~~~~v~~Ss 104 (286)
T 2zcu_A 60 TSALQG--VEKLLLISSSEVGQRAPQHRNVINAAKA-AGVKFIAYTSL 104 (286)
T ss_dssp HHHTTT--CSEEEECC--------CHHHHHHHHHHH-HTCCEEEEEEE
T ss_pred HHHHhC--CCEEEEeCCCCchHHHHHHHHHHHHHHH-cCCCEEEEECC
Confidence 888876 799998776321 246788888854 33456777533
Done!