Query 007459
Match_columns 603
No_of_seqs 209 out of 796
Neff 6.1
Searched_HMMs 29240
Date Tue Mar 26 02:21:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007459.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007459hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kmv_A Alpha-L-arabinofuranosi 99.9 6.8E-22 2.3E-26 186.1 11.8 113 465-586 8-121 (157)
2 1wd3_A Alpha-L-arabinofuranosi 99.8 3.5E-22 1.2E-26 212.9 2.9 152 431-599 297-453 (482)
3 3kmv_A Alpha-L-arabinofuranosi 99.7 8.4E-18 2.9E-22 158.3 11.8 125 420-568 23-150 (157)
4 3akh_A Putative secreted alpha 99.4 1.5E-12 5.3E-17 142.6 11.5 125 457-591 312-437 (468)
5 1wd3_A Alpha-L-arabinofuranosi 99.3 9.8E-12 3.4E-16 133.0 11.3 149 398-566 324-481 (482)
6 3akh_A Putative secreted alpha 99.2 4.5E-11 1.5E-15 131.0 12.5 135 406-566 322-459 (468)
7 3k7x_A LIN0763 protein; Q92DQ0 97.9 1.7E-05 5.7E-10 83.8 7.2 137 24-183 45-184 (349)
8 1nc5_A Hypothetical protein YT 97.8 4.4E-05 1.5E-09 81.0 9.6 142 33-193 43-187 (373)
9 2gz6_A N-acetyl-D-glucosamine 97.6 6.6E-05 2.3E-09 79.1 6.0 156 35-196 119-285 (388)
10 3pmm_A Putative cytoplasmic pr 97.3 0.00041 1.4E-08 74.0 8.7 142 33-193 70-214 (382)
11 2gz6_A N-acetyl-D-glucosamine 97.2 0.00074 2.5E-08 71.0 8.3 177 38-222 179-377 (388)
12 3k7x_A LIN0763 protein; Q92DQ0 97.1 0.00047 1.6E-08 72.7 6.6 126 38-177 99-242 (349)
13 2zbl_A Putative isomerase; N-a 96.3 0.013 4.5E-07 62.7 10.2 156 37-200 178-368 (421)
14 3gt5_A N-acetylglucosamine 2-e 96.2 0.0075 2.6E-07 64.2 7.4 157 38-197 120-296 (402)
15 3gt5_A N-acetylglucosamine 2-e 96.1 0.015 5.1E-07 61.9 9.3 153 37-199 179-361 (402)
16 2zzr_A Unsaturated glucuronyl 95.9 0.047 1.6E-06 58.5 12.2 133 38-179 180-341 (397)
17 2ahf_A Unsaturated glucuronyl 95.9 0.035 1.2E-06 59.0 11.0 133 38-179 155-316 (377)
18 3k11_A Putative glycosyl hydro 94.9 0.038 1.3E-06 60.1 7.3 145 33-193 84-248 (445)
19 2zzr_A Unsaturated glucuronyl 94.4 0.072 2.5E-06 57.0 7.9 125 36-166 251-392 (397)
20 2ahf_A Unsaturated glucuronyl 93.7 0.16 5.4E-06 54.0 8.6 125 36-166 226-367 (377)
21 2zbl_A Putative isomerase; N-a 92.6 0.15 5E-06 54.5 6.5 124 36-178 56-202 (421)
22 1nc5_A Hypothetical protein YT 91.9 0.3 1E-05 51.3 7.8 128 38-183 150-313 (373)
23 1fp3_A N-acyl-D-glucosamine 2- 91.7 0.17 6E-06 53.2 5.7 74 39-115 255-348 (402)
24 3pmm_A Putative cytoplasmic pr 89.5 0.41 1.4E-05 50.7 6.1 129 36-186 174-334 (382)
25 3h7l_A Endoglucanase; dehydrog 87.5 1.6 5.5E-05 48.8 9.5 163 31-202 304-498 (586)
26 1fp3_A N-acyl-D-glucosamine 2- 86.2 0.88 3E-05 47.8 6.2 105 91-199 257-365 (402)
27 1ia6_A Cellulase CEL9M; cellul 77.7 12 0.0004 40.3 11.1 138 38-200 215-355 (441)
28 2yug_A Protein FRG1; spliceoso 76.4 27 0.00092 32.1 11.7 92 416-531 34-127 (155)
29 1ks8_A Endo-B-1,4-glucanase; c 72.3 10 0.00034 40.8 8.8 134 38-201 217-352 (433)
30 3e6u_A LANC-like protein 1; al 71.3 7.1 0.00024 41.4 7.3 120 35-178 235-365 (411)
31 1nxc_A Mannosyl-oligosaccharid 71.1 7.1 0.00024 42.6 7.3 151 30-187 172-346 (478)
32 1g87_A Endocellulase 9G; endog 68.8 21 0.00071 40.1 10.7 72 38-114 216-290 (614)
33 2xfg_A Endoglucanase 1; hydrol 63.1 37 0.0013 36.8 11.0 72 38-114 238-313 (466)
34 3k11_A Putative glycosyl hydro 62.4 5.4 0.00019 43.1 4.2 100 85-195 86-191 (445)
35 2kll_A Interleukin-33; beta-tr 62.3 89 0.0031 28.1 15.4 113 402-531 20-134 (161)
36 1tf4_A T. fusca endo/EXO-cellu 58.3 29 0.00099 38.8 9.3 74 38-114 218-292 (605)
37 2g0d_A Nisin biosynthesis prot 55.5 42 0.0014 34.9 9.6 69 90-179 288-356 (409)
38 2w87_A Esterase D, XYL-CBM35; 54.8 42 0.0015 29.8 8.2 38 282-320 40-78 (139)
39 3e6u_A LANC-like protein 1; al 54.4 15 0.00051 38.9 5.9 76 34-115 292-369 (411)
40 1dl2_A Class I alpha-1,2-manno 51.6 16 0.00056 40.1 5.8 125 30-158 172-317 (511)
41 2ri9_A Mannosyl-oligosaccharid 50.0 63 0.0022 35.1 10.0 140 31-176 162-322 (475)
42 1dl2_A Class I alpha-1,2-manno 49.3 36 0.0012 37.4 8.0 28 90-117 182-209 (511)
43 2ila_A Interleukin-1 alpha; cy 45.6 12 0.00042 34.6 3.0 26 514-543 114-139 (155)
44 1jlx_A Agglutinin, amaranthin, 45.1 23 0.00079 36.1 5.1 33 497-531 91-124 (303)
45 2w3j_A Carbohydrate binding mo 45.0 1.7E+02 0.0057 26.1 11.6 38 282-320 40-78 (145)
46 1x9d_A Endoplasmic reticulum m 44.5 19 0.00066 39.8 4.9 95 87-185 175-271 (538)
47 2wry_A IL-1 beta, interleukin- 43.7 17 0.00056 34.0 3.6 36 503-543 111-146 (162)
48 2w47_A Lipolytic enzyme, G-D-S 43.5 1.4E+02 0.0049 26.2 9.9 38 282-320 41-79 (144)
49 2v8i_A Pectate lyase; periplas 43.1 28 0.00097 37.7 5.7 87 38-127 380-471 (543)
50 2nvh_A IL-1 beta, interleukin- 42.9 11 0.00037 34.9 2.2 28 514-543 108-135 (153)
51 1nxc_A Mannosyl-oligosaccharid 42.7 22 0.00075 38.7 4.9 132 38-185 68-209 (478)
52 1hcu_A Alpha-1,2-mannosidase; 41.7 65 0.0022 35.2 8.5 140 31-176 176-335 (503)
53 1md6_A Interleukin 1 family, m 41.5 11 0.00037 35.0 2.0 27 515-543 107-133 (154)
54 1ut9_A Cellulose 1,4-beta-cell 41.1 2.4E+02 0.0082 31.4 13.2 174 22-218 355-540 (609)
55 1ilt_A Interleukin-1 receptor 37.2 13 0.00044 34.4 1.7 27 515-543 108-134 (152)
56 3gzk_A Cellulase; fold from GH 37.1 81 0.0028 34.7 8.5 75 90-176 252-332 (537)
57 1x9d_A Endoplasmic reticulum m 35.4 72 0.0025 35.2 7.6 156 31-198 235-415 (538)
58 2g0d_A Nisin biosynthesis prot 33.6 28 0.00096 36.2 3.9 70 34-109 282-353 (409)
59 3llp_A Fascin; beta-trefoil, a 33.2 4.4E+02 0.015 28.6 13.4 51 475-531 226-276 (493)
60 3ltq_A Interleukin-1 beta; lan 30.8 22 0.00076 33.5 2.2 28 514-543 126-153 (171)
61 3h7l_A Endoglucanase; dehydrog 28.4 1.4E+02 0.0049 33.2 8.6 134 36-181 255-396 (586)
62 2ri9_A Mannosyl-oligosaccharid 25.8 69 0.0024 34.8 5.4 133 33-185 41-198 (475)
63 1dm9_A Hypothetical 15.5 KD pr 25.2 89 0.003 27.8 5.2 33 312-353 35-67 (133)
64 1i8d_A Riboflavin synthase; ri 24.0 1.3E+02 0.0046 29.1 6.5 56 294-349 20-90 (213)
65 3ddy_A Lumazine protein, LUMP; 23.9 1.5E+02 0.0051 28.1 6.7 56 294-349 20-89 (186)
66 2x2s_A Agglutinin, agglutinin 23.5 1.4E+02 0.0049 27.3 6.1 45 498-543 92-138 (153)
67 1hcu_A Alpha-1,2-mannosidase; 23.1 53 0.0018 35.9 3.8 137 33-185 51-212 (503)
68 3gzk_A Cellulase; fold from GH 20.6 1.4E+02 0.0047 32.8 6.5 76 34-111 246-334 (537)
69 2vzp_A Aocbm35, EXO-beta-D-glu 20.4 3.9E+02 0.013 22.6 8.8 38 282-320 40-78 (127)
70 2k6p_A Uncharacterized protein 20.3 81 0.0028 25.7 3.6 33 312-353 27-59 (92)
No 1
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.86 E-value=6.8e-22 Score=186.14 Aligned_cols=113 Identities=20% Similarity=0.321 Sum_probs=101.7
Q ss_pred CceeeecCCCCCCceEEeecCceeEEEecCCCCCCCceEEEeeccCCCC-CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 007459 465 GKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGD-RTVSLESETYKGCFVYTAVNLQSSESTKLG 543 (603)
Q Consensus 465 g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~-g~vsles~~~pg~~l~~~~~~~~g~~~~l~ 543 (603)
++.|+||++++|++||||.+..++| ++++...+|++|++||||++.+ |+|||||+++||+|||+. |..|+|+
T Consensus 8 ~~~vsl~S~n~p~~ylRh~~~~~~~--~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh~-----~~~l~L~ 80 (157)
T 3kmv_A 8 ITKAKFQSYNYPNMYIRHANFDARI--DENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRHS-----NYDLSLE 80 (157)
T ss_dssp --CBEEEESSSTTCEEEEETTEEEE--ESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEEE-----TTEEEEE
T ss_pred CccEEEEecCCCCcEEEEeCCeEEE--ccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEEe-----CCEEEEe
Confidence 4579999999999999999977666 6677788999999999998865 899999999999999996 9999999
Q ss_pred eecCCCccccccccceeeccCCCccCCceEEEecCCCceeecc
Q 007459 544 CISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAP 586 (603)
Q Consensus 544 ~~~~~~~~~f~~~asF~~~~gl~~y~piSf~a~g~~~~~ll~p 586 (603)
+ .++++.|+++|+|..++||++...+||++...++.||..=
T Consensus 81 ~--~~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh~ 121 (157)
T 3kmv_A 81 K--NDGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRHY 121 (157)
T ss_dssp E--CCSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEEE
T ss_pred c--cCCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEEE
Confidence 7 5788899999999999999999999999999999999763
No 2
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.84 E-value=3.5e-22 Score=212.93 Aligned_cols=152 Identities=18% Similarity=0.200 Sum_probs=127.2
Q ss_pred ecCCCCCccccceEEEEEecCCCCCccccccCCCCceeeecCCC--CCCceEEeecCceeEEEecC---CCCCCCceEEE
Q 007459 431 KFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFD--SPGMLVIQHETDDELVVTDS---FIAQGSSVFHL 505 (603)
Q Consensus 431 ~~p~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~--~p~~~v~~~~~~~~l~v~~~---~~~~~~s~f~~ 505 (603)
..|..+||.++||+||.+ ....++....|.-..+..|+||+.+ +|++||||.+...+|.++.+ .....|++|++
T Consensus 297 ~~Psd~Td~aVqAnivAa-~y~~~s~~s~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF~V 375 (482)
T 1wd3_A 297 GYPSDDTENSVQENIVAA-KYVVGSLVSGPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTV 375 (482)
T ss_dssp SCCCHHHHHHHHHHHHHH-CEEECCCCCSSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEE
T ss_pred cCCChHHHHHHhhceeee-eccCCccccCCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeEEE
Confidence 468889999999999955 2222224456666789999999888 99999999997777755322 22357899999
Q ss_pred eeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEeecCCCccccccccceeeccCCCccCCceEEEecCCCceeec
Q 007459 506 VAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLA 585 (603)
Q Consensus 506 vpgl~g~~g~vsles~~~pg~~l~~~~~~~~g~~~~l~~~~~~~~~~f~~~asF~~~~gl~~y~piSf~a~g~~~~~ll~ 585 (603)
||||++ +++|||||+++|||||||. +.+|+|+ + .++++.|+++|||...+||++++ +||++.+ .
T Consensus 376 VpGLAd-~g~VSFES~n~PG~YLRH~-----n~~LrL~-~-~DgS~~FrqDATF~~~~GL~~~g-vSFeS~n-------~ 439 (482)
T 1wd3_A 376 VTGLAN-SQCFSFESVDTPGSYIRHY-----NFELLLN-A-NDGTKQFHEDATFCPQAALNGEG-TSLRSWS-------Y 439 (482)
T ss_dssp EECSSC-TTSEEEEESSSTTEEEEEE-----TTEEEEE-E-CCCCHHHHHHTCEEEEECTTSSS-EEEEESS-------S
T ss_pred eccccC-CCeEEEEecCCCCceEEEe-----CCEEEEe-c-CCCCcccccCceeEeccCCCCCc-eeEEEEC-------C
Confidence 999998 7999999999999999997 9999999 4 47888999999999999999988 9999998 7
Q ss_pred ccccccccceEEEE
Q 007459 586 PLLSLRDESYTVYF 599 (603)
Q Consensus 586 pl~~~~~~~~~~~~ 599 (603)
|..-||++.|++|-
T Consensus 440 PgrYLRH~n~~Lyl 453 (482)
T 1wd3_A 440 PTRYFRHYENVLYA 453 (482)
T ss_dssp TTCEEEEETTEEEE
T ss_pred CCcEEEEeCCEEEE
Confidence 78888899999986
No 3
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.74 E-value=8.4e-18 Score=158.32 Aligned_cols=125 Identities=14% Similarity=0.190 Sum_probs=95.1
Q ss_pred EecCCCceEeeecCCCCCccccceEEEEEecCCCCCccccccCCCCceeeecCCCCCCceEEeecCceeEEEecCCCC--
Q 007459 420 LTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIA-- 497 (603)
Q Consensus 420 ~~~~~~~~~~~~~p~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~-- 497 (603)
+...+..+.+.. +....-.|+||++.+-.++ .+-.|+||+.++|++||||.+.+++| +.+..+
T Consensus 23 lRh~~~~~~~~~----~~~~~~datF~vvpGLa~~---------~~g~VSfES~n~Pg~yLRh~~~~l~L--~~~~~s~~ 87 (157)
T 3kmv_A 23 IRHANFDARIDE----NVTPEMDSQWELVPGLANS---------GDGYVSIQSVNYPGYYLRHSNYDLSL--EKNDGTSL 87 (157)
T ss_dssp EEEETTEEEEES----SCSSGGGGCEEEEECSSCC---------STTEEEEEESSSTTEEEEEETTEEEE--EECCSCHH
T ss_pred EEEeCCeEEEcc----CCCCccCceEEEeCCcCCC---------CCCEEEEEECCCCCcEEEEeCCEEEE--eccCCCCC
Confidence 344555665554 3445778999999553222 11378999999999999999866666 544332
Q ss_pred -CCCceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEeecCCCccccccccceeeccCCCcc
Q 007459 498 -QGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEY 568 (603)
Q Consensus 498 -~~~s~f~~vpgl~g~~g~vsles~~~pg~~l~~~~~~~~g~~~~l~~~~~~~~~~f~~~asF~~~~gl~~y 568 (603)
.+|++|++||||++ +|.|||||.++||||||+. |..++|+| . +++.|+++|+|...+|.-+-
T Consensus 88 f~~dATF~~~~GLa~-~~~vSfeS~n~Pg~yLrh~-----~~~l~l~~--~-~t~~fr~dATF~~~~~~~~~ 150 (157)
T 3kmv_A 88 FAESATFKIVPGLAD-PSYISFQSYNFPTRYIRHY-----NYLLRLDE--I-VTELDRQDATFKIISEDTQL 150 (157)
T ss_dssp HHHTTCEEEEECSSC-TTSEEEEESSSTTEEEEEE-----TTEEEEEE--C-CSHHHHHHTCEEEEC-----
T ss_pred ccCCceEEEccCccC-CCcEEEEEEcCCCeEEEEE-----CCEEEEec--C-CCchhccCCeEEEecCcchh
Confidence 57899999999999 7999999999999999997 99999997 3 68889999999999997653
No 4
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=99.36 E-value=1.5e-12 Score=142.60 Aligned_cols=125 Identities=22% Similarity=0.290 Sum_probs=106.5
Q ss_pred cccccCCCCceeeecCCCCCCceEEeecCceeEEEecCCCCCCCceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCC
Q 007459 457 FSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQS 536 (603)
Q Consensus 457 ~~~p~~~~g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~g~vsles~~~pg~~l~~~~~~~~ 536 (603)
+..|...+.+.+++++.+.|+.||||.+. .|+++.+.....+++|++||||++ +++|||||+++||.|||+.
T Consensus 312 ~~~~~~~g~~~~s~~s~~~pg~ylrh~~~--~v~l~~~~~~~~d~tf~~~~gl~~-~~~~s~~s~~ypg~~lr~~----- 383 (468)
T 3akh_A 312 FGIPVADGVTPVRFSSYNYPDRYIRHWDF--RARIEANVTNLADSQFRVVTGLAG-SGTISLESANYPGYYLRHK----- 383 (468)
T ss_dssp CCCCCCSEECCBCEEESSSTTCEEEEETT--EEEEESSCSSGGGGCEEEEECTTC-TTCEEEEESSSTTEEEEEE-----
T ss_pred eccccccCccccccccccccccEEEEecC--cEEEccCCCCcccceEEEccCCCC-CceEEEEEEeCCCeEEEEE-----
Confidence 44555556667899999999999999984 566677666678999999999988 6999999999999999997
Q ss_pred CCcEEEEeecCCCccccccccceeeccCCCcc-CCceEEEecCCCceeeccccccc
Q 007459 537 SESTKLGCISESTEAGFNNAASFVIEKGLSEY-HPISFVAKGANRNFLLAPLLSLR 591 (603)
Q Consensus 537 g~~~~l~~~~~~~~~~f~~~asF~~~~gl~~y-~piSf~a~g~~~~~ll~pl~~~~ 591 (603)
+..|+|+ + .++++.|+++|+|++++||++- ..+||+....+..||.+==++|+
T Consensus 384 ~~~~~~~-~-~~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~~~~l~ 437 (468)
T 3akh_A 384 NYEVWVE-K-NDGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRHYENLLR 437 (468)
T ss_dssp TTEEEEE-E-CCSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEETTEEE
T ss_pred CCEEEEe-c-CCCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEeCCeEE
Confidence 8899999 3 4777889999999999999997 89999999999999986544444
No 5
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.28 E-value=9.8e-12 Score=133.00 Aligned_cols=149 Identities=17% Similarity=0.251 Sum_probs=110.0
Q ss_pred ccCCCCccceeeeeec-CCeeEEEecCCCceEeeecCCC-CCccccceEEEEEecCCCCCccccccCCCCceeeecCCCC
Q 007459 398 IPASYNSQLITFTQEY-GNTKFVLTNSNQSITMEKFPKS-GTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDS 475 (603)
Q Consensus 398 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~-g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~~ 475 (603)
.|.+.....++|+-.+ +.+.+.|.+.++.+.+++.... .+...-+|+|+++.+-. +...|+||+.+.
T Consensus 324 ~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF~VVpGLA-----------d~g~VSFES~n~ 392 (482)
T 1wd3_A 324 GPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLA-----------NSQCFSFESVDT 392 (482)
T ss_dssp SSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSS-----------CTTSEEEEESSS
T ss_pred CCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeEEEecccc-----------CCCeEEEEecCC
Confidence 4554556678886654 3344566678888887764322 33446689999986521 123689999999
Q ss_pred CCceEEeecCceeEEEecCCC---CCCCceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEee----cCC
Q 007459 476 PGMLVIQHETDDELVVTDSFI---AQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCI----SES 548 (603)
Q Consensus 476 p~~~v~~~~~~~~l~v~~~~~---~~~~s~f~~vpgl~g~~g~vsles~~~pg~~l~~~~~~~~g~~~~l~~~----~~~ 548 (603)
|+.||||.+ .+|+|+++.. -..|+.|++++||.+ .| |||||.++||.||||. +..|.|.-. .-+
T Consensus 393 PG~YLRH~n--~~LrL~~~DgS~~FrqDATF~~~~GL~~-~g-vSFeS~n~PgrYLRH~-----n~~Lyla~~gg~~~~d 463 (482)
T 1wd3_A 393 PGSYIRHYN--FELLLNANDGTKQFHEDATFCPQAALNG-EG-TSLRSWSYPTRYFRHY-----ENVLYAASNGGVQTFD 463 (482)
T ss_dssp TTEEEEEET--TEEEEEECCCCHHHHHHTCEEEEECTTS-SS-EEEEESSSTTCEEEEE-----TTEEEEECSSCSSGGG
T ss_pred CCceEEEeC--CEEEEecCCCCcccccCceeEeccCCCC-Cc-eeEEEECCCCcEEEEe-----CCEEEEecCCCccccc
Confidence 999999998 4555565432 246899999999988 56 9999999999999997 889999520 124
Q ss_pred CccccccccceeeccCCC
Q 007459 549 TEAGFNNAASFVIEKGLS 566 (603)
Q Consensus 549 ~~~~f~~~asF~~~~gl~ 566 (603)
+++.|++++||+...|++
T Consensus 464 ~t~~f~~DaTF~v~~pwA 481 (482)
T 1wd3_A 464 SKTSFNNDVSFEIETAFA 481 (482)
T ss_dssp CSTTHHHHTCEEEEECTT
T ss_pred CcccccCCceEEeccCCC
Confidence 567799999999999886
No 6
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=99.21 E-value=4.5e-11 Score=130.99 Aligned_cols=135 Identities=17% Similarity=0.184 Sum_probs=97.3
Q ss_pred ceeeeeecCCeeEEEecCCCceEeeecCCCCCccccceEEEEEecCCCCCccccccCCCCceeeecCCCCCCceEEeecC
Q 007459 406 LITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHET 485 (603)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~~p~~~v~~~~~ 485 (603)
++++....-...|. .+.++.|.++.- ++ ....++||++.+-. +...+++++.++|+.|+||.+.
T Consensus 322 ~~s~~s~~~pg~yl-rh~~~~v~l~~~---~~-~~~d~tf~~~~gl~-----------~~~~~s~~s~~ypg~~lr~~~~ 385 (468)
T 3akh_A 322 PVRFSSYNYPDRYI-RHWDFRARIEAN---VT-NLADSQFRVVTGLA-----------GSGTISLESANYPGYYLRHKNY 385 (468)
T ss_dssp CBCEEESSSTTCEE-EEETTEEEEESS---CS-SGGGGCEEEEECTT-----------CTTCEEEEESSSTTEEEEEETT
T ss_pred ccccccccccccEE-EEecCcEEEccC---CC-CcccceEEEccCCC-----------CCceEEEEEEeCCCeEEEEECC
Confidence 44554433223454 356677887752 22 36899999884311 1234799999999999999985
Q ss_pred ceeEEEecCCC---CCCCceEEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEEeecCCCccccccccceeec
Q 007459 486 DDELVVTDSFI---AQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIE 562 (603)
Q Consensus 486 ~~~l~v~~~~~---~~~~s~f~~vpgl~g~~g~vsles~~~pg~~l~~~~~~~~g~~~~l~~~~~~~~~~f~~~asF~~~ 562 (603)
.++ |++... -.+|+.|++||||++..+.|||||+++||.|||+. +..|+|+ + .+++.|+++|+|+..
T Consensus 386 ~~~--~~~~~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~-----~~~l~~~-~--~~~~~~~~~atf~~~ 455 (468)
T 3akh_A 386 EVW--VEKNDGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRHY-----ENLLRIQ-P--VSTALDRQDATFYAE 455 (468)
T ss_dssp EEE--EEECCSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEE-----TTEEEEE-E--CCSHHHHHHTCEEEC
T ss_pred EEE--EecCCCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEe-----CCeEEEc-c--CCCchhcccceeeec
Confidence 544 454322 23689999999998844899999999999999997 8889999 3 346779999999999
Q ss_pred cCCC
Q 007459 563 KGLS 566 (603)
Q Consensus 563 ~gl~ 566 (603)
+++.
T Consensus 456 ~~~~ 459 (468)
T 3akh_A 456 KLAA 459 (468)
T ss_dssp C---
T ss_pred cchh
Confidence 8864
No 7
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.87 E-value=1.7e-05 Score=83.77 Aligned_cols=137 Identities=12% Similarity=0.116 Sum_probs=90.4
Q ss_pred HHHHHhhhcccchhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCcccccccc-eehhHhHHHHHhCChhH
Q 007459 24 RHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIP-IVIGSQMRYEVTGDQLH 102 (603)
Q Consensus 24 ~~~~~l~~E~GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~hanthip-~~~G~a~~Y~~Tgd~~y 102 (603)
.||. +||..+|.+.|+.|||++|+++|+.... +. .....+.+...+ +..+- ...++...|++|||+.|
T Consensus 45 yWW~------a~~~~~l~d~~~~tgd~~y~~~a~~~~~--~~--~~~~~~~~~~~~-~DD~a~~~la~~~aye~t~~~~y 113 (349)
T 3k7x_A 45 YWWL------AHLVEVRLDAYLRTKKQADLEVAEKTYL--HN--KNRNGGTLIHDF-YDDMLWNALAAYRLYKATGKSIY 113 (349)
T ss_dssp HHHH------HHHHHHHHHHHHHHCCHHHHHHHHHHHH--HH--HHHTTSSSCCSB-HHHHHHHHHHHHHHHHHHCCHHH
T ss_pred ccHH------HHHHHHHHHHHHHhCCHHHHHHHHHHHH--HH--HhcCCCCCCccC-ccHHHHHHHHHHHHHHHHCCchH
Confidence 4776 4667999999999999999999997542 10 011112221111 11111 34678888999999999
Q ss_pred HHHHHHHHHHHhhccee--eecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCCchHHHHHHHHhcc
Q 007459 103 KTISMFFMDIVNSSHTY--ATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNG 180 (603)
Q Consensus 103 ~~aa~~fwd~v~~~h~y--~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERalyN~ 180 (603)
++.++..++.+...+-- ..||+ +|..+. ..+--+|+.--++.+.-+|.+.|+|++|.|..|+++ +-
T Consensus 114 L~~A~~l~~~l~~~~wd~~~gGGi----~W~~~~-------~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~-~w 181 (349)
T 3k7x_A 114 LEDAQLVWQDLVDTGWNDIMGGGF----AWRRPQ-------MYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTY-EW 181 (349)
T ss_dssp HHHHHHHHHHHHHHTBCSGGGSCB----EEETTE-------EEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCce----EecCCC-------ccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HH
Confidence 99999999988322222 23555 344321 123445666667788899999999999999999764 34
Q ss_pred ccc
Q 007459 181 VLG 183 (603)
Q Consensus 181 vla 183 (603)
+..
T Consensus 182 ~~~ 184 (349)
T 3k7x_A 182 QTK 184 (349)
T ss_dssp HHH
T ss_pred HHh
Confidence 433
No 8
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.82 E-value=4.4e-05 Score=81.01 Aligned_cols=142 Identities=11% Similarity=0.003 Sum_probs=88.9
Q ss_pred ccchhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCC--CcccccccceehhHhHHHHHhCChhHHHHHHHHH
Q 007459 33 AGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDIS--GFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFM 110 (603)
Q Consensus 33 ~GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~--g~hanthip~~~G~a~~Y~~Tgd~~y~~aa~~fw 110 (603)
.|-|..+|.++|++|||++|++.|+...+.- +.. .+ .+. ..+. .+..+..+...+|++|||++|++++...+
T Consensus 43 ~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~-~~~--~g--~l~~~~~~l-Dd~~~g~~ll~lY~~Tgd~~yl~~a~~la 116 (373)
T 1nc5_A 43 QGVFLCGVLRLWEATGEKRYFEYAKAYADLL-IDD--NG--NLLFRRDEL-DAIQAGLILFPLYEQTKDERYVKAAKRLR 116 (373)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-BCT--TC--CBCCCTTCG-GGTGGGGGHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-hCC--CC--cccCCCCCc-chHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5777899999999999999999998764321 110 00 110 0011 22234567888999999999999999999
Q ss_pred HHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchhH-HHHHHHHHHHhhcCCCchHHHHHHHHhccccccCCCCC
Q 007459 111 DIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTY-NMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTE 189 (603)
Q Consensus 111 d~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~-nmlkl~~~Lf~~tgD~~YaD~~ERalyN~vla~q~~~~ 189 (603)
+.+.. +- -++ .+-+|..+. ....+-|... =.+-+.-+|.++|||++|.|..++.+-...--..++ +
T Consensus 117 ~~l~~-~~-r~~---~G~fw~~~~-------~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~-~ 183 (373)
T 1nc5_A 117 SLYGT-LN-RTS---EGGFWHKDG-------YPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQESLMRKHTKDA-K 183 (373)
T ss_dssp GGGGT-SC-BCT---TSCBCSCTT-------STTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCT-T
T ss_pred HHHHh-cc-CCC---CCCeeccCC-------CCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCC-C
Confidence 99853 22 222 112243211 1122333332 124456778999999999999999766554434454 4
Q ss_pred CCcE
Q 007459 190 PGVM 193 (603)
Q Consensus 190 ~g~~ 193 (603)
.|.+
T Consensus 184 tGl~ 187 (373)
T 1nc5_A 184 TGLF 187 (373)
T ss_dssp TSCB
T ss_pred CCCE
Confidence 4544
No 9
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.55 E-value=6.6e-05 Score=79.08 Aligned_cols=156 Identities=6% Similarity=-0.156 Sum_probs=89.6
Q ss_pred chhHHHHHHHhHcCCHHHHHHHhhccc---CCcchhh------hhcCCCCCCcccccccceehhHhHHHHHhCChhHHHH
Q 007459 35 GMNDVLYKLFCITQDPKHLMLAHLFDK---PCFLGLL------ALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTI 105 (603)
Q Consensus 35 Gmne~L~~LY~iTGd~~yL~lA~~F~~---~~~~~~l------~~~~D~l~g~hanthip~~~G~a~~Y~~Tgd~~y~~a 105 (603)
=|..+|.++|+.|||++||+.|+...+ ..+.++. ........+ .+.+.-.+.++..+|++|+|+.|++.
T Consensus 119 f~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~~~~~--~~~~~~~~~all~l~~~t~d~~~~~~ 196 (388)
T 2gz6_A 119 FAAMAFSQYALASGEEWAKDVAMQAYNNVLRRKDNPKGKYTKTYPGTRPMKA--LAVPMILANLTLEMEWLLPQETLENV 196 (388)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC--------------CCCCEE--THHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccCcccCCCCCCCC--CCHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 345799999999999999999988632 1221110 000001111 11122233556778999999999999
Q ss_pred HHHHHHHHhhcceee--ecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCCchHHHHHHHHhccccc
Q 007459 106 SMFFMDIVNSSHTYA--TGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLG 183 (603)
Q Consensus 106 a~~fwd~v~~~h~y~--tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERalyN~vla 183 (603)
++...+.+.+ +.+- .|++ .|+|...............+-....++..+.-++.+++||.+|.+..++.+=..+--
T Consensus 197 A~~~~~~~~~-~~~~~~~g~~--~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~ 273 (388)
T 2gz6_A 197 LAATVQEVMG-DFLDQEQGLM--YENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNF 273 (388)
T ss_dssp HHHHHHHHHH-TTEETTTTEE--CSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHhccCCCeE--EEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 9999998864 4332 2322 244333211001011223444445566777778888899999999988776544333
Q ss_pred cCCCCCCCcEEEe
Q 007459 184 IQRGTEPGVMIYL 196 (603)
Q Consensus 184 ~q~~~~~g~~~Y~ 196 (603)
+.++ +.|.++|.
T Consensus 274 g~d~-~~Gg~~~~ 285 (388)
T 2gz6_A 274 AWDN-EYGGLYYF 285 (388)
T ss_dssp HBCT-TTCSBCSC
T ss_pred hccC-CCCCEEEe
Confidence 4454 43445443
No 10
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.33 E-value=0.00041 Score=74.00 Aligned_cols=142 Identities=13% Similarity=0.059 Sum_probs=87.4
Q ss_pred ccchhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCcccccccceehhHhHHHHHhCChhHHHHHHHHHHH
Q 007459 33 AGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISMFFMDI 112 (603)
Q Consensus 33 ~GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~hanthip~~~G~a~~Y~~Tgd~~y~~aa~~fwd~ 112 (603)
.|-|..+|.++|++|||++|++.|+.+.+.. +. .+ .. ..|.++.-+ ......+|+.|||++|++++..+.+.
T Consensus 70 ~G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~-~~---~~-~~--~~n~D~~~~-~~~l~~lY~~Tgd~~Yl~~a~~~ad~ 141 (382)
T 3pmm_A 70 HGVGLYGIYQYYQQTGDIEMRDIIDRWFADR-FA---EG-AT--TKNVNTMAP-FLTLAYRFEETGRMAYLPWLESWAEW 141 (382)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-HH---HC-CC--CCCTTTTTT-HHHHHHHHHHHCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-Hc---CC-CC--cCcccchHH-HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3777899999999999999999999865421 11 11 11 123333322 34678899999999999999999998
Q ss_pred Hhhcc-eeeecCCCCCCCCCCCcccccCCCCCccccchh--HHHHHHHHHHHhhcCCCchHHHHHHHHhccccccCCCCC
Q 007459 113 VNSSH-TYATGGTSVGEFWSDPKRLASNLDSNTEESCTT--YNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTE 189 (603)
Q Consensus 113 v~~~h-~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas--~nmlkl~~~Lf~~tgD~~YaD~~ERalyN~vla~q~~~~ 189 (603)
+..+. --..||+-.. ... . ...+.-=|.. .++. +.-++.+.|||++|.|.+.+-+....--..++ +
T Consensus 142 L~~~~~r~~~Ggf~~~-----~~~--~--~~~~~~WiDgl~M~~p-~La~~~~~tgd~~y~d~A~~q~~~~~~~l~D~-~ 210 (382)
T 3pmm_A 142 AMHEMPRTEQGGMQHM-----TLA--E--ENHQQMWDDTLMMTVL-PLAKIGKLLNRPQYVEEATYQFLLHVQNLMDR-E 210 (382)
T ss_dssp HHHTSCBCGGGCBCCC-----CSS--C--CCTTEEETTHHHHTHH-HHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCT-T
T ss_pred HHhhCCCCcCCCeeee-----cCC--C--CCCCcEEecchhhhHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHccCC-C
Confidence 85432 1244555321 100 0 0111111221 2333 45678899999999998877665554333444 4
Q ss_pred CCcE
Q 007459 190 PGVM 193 (603)
Q Consensus 190 ~g~~ 193 (603)
.|.+
T Consensus 211 tGl~ 214 (382)
T 3pmm_A 211 TGLW 214 (382)
T ss_dssp TSCB
T ss_pred CCCe
Confidence 4443
No 11
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.16 E-value=0.00074 Score=71.01 Aligned_cols=177 Identities=11% Similarity=-0.056 Sum_probs=94.4
Q ss_pred HHHHHHHhHcCCHHHHHHHhhccc---CCcchhhhh------cCC--CCCCcccccccce--eh---hHhHHHHHhCChh
Q 007459 38 DVLYKLFCITQDPKHLMLAHLFDK---PCFLGLLAL------QAD--DISGFHSNTHIPI--VI---GSQMRYEVTGDQL 101 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F~~---~~~~~~l~~------~~D--~l~g~hanthip~--~~---G~a~~Y~~Tgd~~ 101 (603)
++|.+||++|||++|++.|+...+ ..|.++... ..| .+.........|- ++ -....+++|||+.
T Consensus 179 ~all~l~~~t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~ 258 (388)
T 2gz6_A 179 NLTLEMEWLLPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSK 258 (388)
T ss_dssp HHHHHTGGGSCHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHH
Confidence 789999999999999999887632 112211100 000 0000000111110 01 1334578999999
Q ss_pred HHHHHHHHHHHHhhcceee--ecCCCCCCCC-CCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCCchHHHHHHHH-
Q 007459 102 HKTISMFFMDIVNSSHTYA--TGGTSVGEFW-SDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSL- 177 (603)
Q Consensus 102 y~~aa~~fwd~v~~~h~y~--tGG~g~~E~f-~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERal- 177 (603)
|+++|+..++.+.+ +.+- +||+-..-.+ +.| ...+.....-.+...+++.-.-.+++.|||.+|.+.+++..
T Consensus 259 ~~~~A~~~~~~~~~-~g~d~~~Gg~~~~~~~~g~~---~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~ 334 (388)
T 2gz6_A 259 TINQAVDVVLNILN-FAWDNEYGGLYYFMDAAGHP---PQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHD 334 (388)
T ss_dssp HHHHHHHHHHHHHH-HHBCTTTCSBCSCEETTSCC---CSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhccCCCCCEEEeecCCCCc---cccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999888887753 3221 2444321111 110 00011133345666778888888999999999999998854
Q ss_pred --hccccccCCCCCCCcEEEecCCCCCCCCccCcCCCCCCCCCcccc
Q 007459 178 --TNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCC 222 (603)
Q Consensus 178 --yN~vla~q~~~~~g~~~Y~~Pl~~g~~k~~~~~~~~t~~~~f~CC 222 (603)
+++++ ++..++.|.+.++-+.... ......|..+++.+.||
T Consensus 335 ~~~~~~~---D~~~G~w~~~l~~~g~~~~-~~~~~~~K~~YH~~~~~ 377 (388)
T 2gz6_A 335 YSWQHFA---DPEYGEWFGYLNRRGEVLL-NLKGGKWKGCFHVPRAM 377 (388)
T ss_dssp HHHHHHB---CTTTSSBCCEECTTSCBSS-CBSCCSSCSSSHHHHHH
T ss_pred HHHHhCc---CCCCCceEEeeCCCcCCCC-cCCCCCCCCCcchHHHH
Confidence 33333 3334556667765432211 11123444455554444
No 12
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.14 E-value=0.00047 Score=72.67 Aligned_cols=126 Identities=21% Similarity=0.157 Sum_probs=77.8
Q ss_pred HHHHHHHhHcCCHHHHHHHhhccc----CCcchhhhhcCCCCCCccccc----------ccceehhHhHHHHHhCChhHH
Q 007459 38 DVLYKLFCITQDPKHLMLAHLFDK----PCFLGLLALQADDISGFHSNT----------HIPIVIGSQMRYEVTGDQLHK 103 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F~~----~~~~~~l~~~~D~l~g~hant----------hip~~~G~a~~Y~~Tgd~~y~ 103 (603)
.++.++|++|||++||++|+.+.+ ..+.+++. .|++.+. ..+.+..++++|++|||+.|+
T Consensus 99 la~~~aye~t~~~~yL~~A~~l~~~l~~~~wd~~~g------GGi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl 172 (349)
T 3k7x_A 99 LAAYRLYKATGKSIYLEDAQLVWQDLVDTGWNDIMG------GGFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYL 172 (349)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCSGGG------SCBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHCCchHHHHHHHHHHHHHHhCCCCCCC------CceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHH
Confidence 789999999999999999986532 11111111 1222221 122345578889999999999
Q ss_pred HHHHHHHHHHhhcceee-ecCCCCCCCCCCCcccccCCCCCccccchhHH---HHHHHHHHHhhcCCCchHHHHHHHH
Q 007459 104 TISMFFMDIVNSSHTYA-TGGTSVGEFWSDPKRLASNLDSNTEESCTTYN---MLKVSRHLFRWTKEIAYADYYERSL 177 (603)
Q Consensus 104 ~aa~~fwd~v~~~h~y~-tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~n---mlkl~~~Lf~~tgD~~YaD~~ERal 177 (603)
+.|+..|+.+.+ +++- .|.+-.++. ... ......+..=+|| +|.-+-.|++.|+|++|.+..++.+
T Consensus 173 ~~A~~~~~w~~~-~l~d~~g~v~Dg~~------~~~-~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~ 242 (349)
T 3k7x_A 173 EWAMKTYEWQTK-VLVREDGFVEDGIN------RLE-DGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTA 242 (349)
T ss_dssp HHHHHHHHHHHH-HHBCTTSCBCCEEC------TTS-SSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCCCCCeEecCCc------cCC-CCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 999999999975 4432 122211110 000 0000112233333 5666788999999999999998765
No 13
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=96.30 E-value=0.013 Score=62.75 Aligned_cols=156 Identities=9% Similarity=-0.013 Sum_probs=87.1
Q ss_pred hHHHHHHHhHcCCHHHHHHHhhccc---CCcch----hhhhc-CCC---CCCc----ccccccc--eeh--------hHh
Q 007459 37 NDVLYKLFCITQDPKHLMLAHLFDK---PCFLG----LLALQ-ADD---ISGF----HSNTHIP--IVI--------GSQ 91 (603)
Q Consensus 37 ne~L~~LY~iTGd~~yL~lA~~F~~---~~~~~----~l~~~-~D~---l~g~----hanthip--~~~--------G~a 91 (603)
.++|.+||++|||++|++.|+...+ ..+.. .+... ++. +.+. -.+...| +-- +.+
T Consensus 178 ~~al~~l~~~tgd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl 257 (421)
T 2zbl_A 178 VEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLML 257 (421)
T ss_dssp HHHHHHHHHTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHH
Confidence 4889999999999999987766521 11111 00000 000 1000 0011111 012 345
Q ss_pred HHHHHh---CC--h-hHHHHHHHHHHHHhhcceee-e--cCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHh
Q 007459 92 MRYEVT---GD--Q-LHKTISMFFMDIVNSSHTYA-T--GGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFR 162 (603)
Q Consensus 92 ~~Y~~T---gd--~-~y~~aa~~fwd~v~~~h~y~-t--GG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~ 162 (603)
..|+++ || + .|++.|+..++.+.+ +.+- . ||.--. ..+ .+.+.....+.+..-+++.-.-.|++
T Consensus 258 ~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~-~g~d~~~~GG~~~~---~~~---~g~~~~~~k~~w~~aea~~all~l~~ 330 (421)
T 2zbl_A 258 HLHAALEARFETPPAWLLEDAKGLFHATIR-DAWAPDGADGFVYS---VDW---DGKPIVRERVRWPIVEAMGTAYALYT 330 (421)
T ss_dssp HHHHHHHHTTCCCCTHHHHHHHHHHHHHHH-HHBSCSSSSSBCSC---BCT---TSCBSCCCEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHcccccccchHHHHHHHHHHHHHHHH-HhcCCCCCCcEEEe---ecC---CCCccCCCcccHHHHHHHHHHHHHHH
Confidence 668888 66 5 899999998888864 5543 2 443211 111 11112345556666777778888999
Q ss_pred hcCCCchHHHHHHHHhcccccc-CCCCCCCcEEEecCCC
Q 007459 163 WTKEIAYADYYERSLTNGVLGI-QRGTEPGVMIYLLPLA 200 (603)
Q Consensus 163 ~tgD~~YaD~~ERalyN~vla~-q~~~~~g~~~Y~~Pl~ 200 (603)
.|||.+|.+.+++.+ +.+... .++..++.|.+..+-+
T Consensus 331 ~tgd~~yl~~a~~~~-~~~~~~~~d~~~G~w~~~l~~~g 368 (421)
T 2zbl_A 331 LTDDSQYEEWYQKWW-DYCIKYLMDYENGSWWQELDADN 368 (421)
T ss_dssp HHCCHHHHHHHHHHH-HHHHHHTBCTTTSSBCSEECTTS
T ss_pred HhCCHHHHHHHHHHH-HHHHHhCCCCCCCeeEeeECcCc
Confidence 999999999998853 333332 2222344555665443
No 14
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.16 E-value=0.0075 Score=64.25 Aligned_cols=157 Identities=11% Similarity=-0.051 Sum_probs=90.5
Q ss_pred HHHHHHHhHcCCHHHHHHHhhccc---CCcchhhhh------cCC-CCCC-cccccccceehhHhHHHHHhCChhHHHHH
Q 007459 38 DVLYKLFCITQDPKHLMLAHLFDK---PCFLGLLAL------QAD-DISG-FHSNTHIPIVIGSQMRYEVTGDQLHKTIS 106 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F~~---~~~~~~l~~------~~D-~l~g-~hanthip~~~G~a~~Y~~Tgd~~y~~aa 106 (603)
.+|.+ |..|||++||++|+...+ ..|.++... ..| .+.. .-.|.|.-++.....+|++|||+.|++.+
T Consensus 120 ~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a 198 (402)
T 3gt5_A 120 LAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERA 198 (402)
T ss_dssp HHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHH-HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 68889 778999999999997532 122222110 001 0000 01222323345677789999999999999
Q ss_pred HHHHHHHhhcceeeecCCCCCCCCCCCcccc-cC--------CCCCccccchhHHHHHHHHHHHhhcCCCchHHHHHHHH
Q 007459 107 MFFMDIVNSSHTYATGGTSVGEFWSDPKRLA-SN--------LDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSL 177 (603)
Q Consensus 107 ~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~-~~--------l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERal 177 (603)
+...+.+.+ +.+---+-.-.|+|..+...- +. ....+.+-=-.++++.+.-++.+.+++.+|.+..++.+
T Consensus 199 ~~l~~~~~~-~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~ 277 (402)
T 3gt5_A 199 LVLADRITR-RQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLF 277 (402)
T ss_dssp HHHHHHHHT-HHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHH
T ss_pred HHHHHHHHH-HhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 999888863 443221113346665432210 00 00011222334566777777888899999999999876
Q ss_pred hccccccCCCCCCCcEEEec
Q 007459 178 TNGVLGIQRGTEPGVMIYLL 197 (603)
Q Consensus 178 yN~vla~q~~~~~g~~~Y~~ 197 (603)
=..+--+-++ +.|.++|..
T Consensus 278 ~~~~~~gwd~-~~Gg~~~~~ 296 (402)
T 3gt5_A 278 DVAVARSWDA-VRGGLCYGF 296 (402)
T ss_dssp HHHHHHHBCT-TTCSBCSEE
T ss_pred HHHHHhcccC-CCCcEEEEE
Confidence 4333334554 456666654
No 15
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.10 E-value=0.015 Score=61.95 Aligned_cols=153 Identities=11% Similarity=0.096 Sum_probs=90.0
Q ss_pred hHHHHHHHhHcCCHHHHHHHhhccc---CCcchhhh----hcCC-CC-CCcccccccc--------eehhH--------h
Q 007459 37 NDVLYKLFCITQDPKHLMLAHLFDK---PCFLGLLA----LQAD-DI-SGFHSNTHIP--------IVIGS--------Q 91 (603)
Q Consensus 37 ne~L~~LY~iTGd~~yL~lA~~F~~---~~~~~~l~----~~~D-~l-~g~hanthip--------~~~G~--------a 91 (603)
.+++.+||++|||++|++.|+...+ ..|.++.. +.-| +. .....|..-| +--|| .
T Consensus 179 ~eall~L~~~tgd~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl 258 (402)
T 3gt5_A 179 CEAMLAAYEASGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLL 258 (402)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHH
Confidence 3789999999999999999987632 11222110 0000 00 0000011111 22365 3
Q ss_pred HHHHHhCChhHHHHHHHHHHHHhhcceee--ecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCCch
Q 007459 92 MRYEVTGDQLHKTISMFFMDIVNSSHTYA--TGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAY 169 (603)
Q Consensus 92 ~~Y~~Tgd~~y~~aa~~fwd~v~~~h~y~--tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~Y 169 (603)
..+++++|+.|++.++..++.+.+ +.+- .||+-.. .+++ +.........+...+.|.-+-.|++.|||.+|
T Consensus 259 ~~~~~~~~~~~~~~A~~l~~~~~~-~gwd~~~Gg~~~~---~d~~---g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~y 331 (402)
T 3gt5_A 259 ILDRYIEVEWLVPVARSLFDVAVA-RSWDAVRGGLCYG---FAPD---GTICDDDKYFWVQAESLAAAALLATRSGDERY 331 (402)
T ss_dssp HHHHHCCCTTHHHHHHHHHHHHHH-HHBCTTTCSBCSE---ECTT---SCEEECCEEHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHhhCcHHHHHHHHHHHHHHHH-hcccCCCCcEEEE---EcCC---CCeeeCCcceeHHHHHHHHHHHHHHHhCCHHH
Confidence 447889999999999888888753 3332 4555321 1111 11113455677778888888999999999999
Q ss_pred HHHHHHHH---hccccccCCCCCCCcEEEecCC
Q 007459 170 ADYYERSL---TNGVLGIQRGTEPGVMIYLLPL 199 (603)
Q Consensus 170 aD~~ERal---yN~vla~q~~~~~g~~~Y~~Pl 199 (603)
.+.+++.. ..+++-.. .+..|.+.++-
T Consensus 332 l~~a~~~~~~~~~~~~D~~---~G~W~~~l~~d 361 (402)
T 3gt5_A 332 WQWYDRLWAYAWQHMVDHR---YGAWYRLLDGD 361 (402)
T ss_dssp HHHHHHHHHHHHHHTBCTT---TCSBCSEECTT
T ss_pred HHHHHHHHHHHHHhCcCCC---CCeEEEEECCC
Confidence 99998875 33333322 33455666543
No 16
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=95.93 E-value=0.047 Score=58.48 Aligned_cols=133 Identities=13% Similarity=0.072 Sum_probs=73.5
Q ss_pred HHHHHHHhHcCCHHHHHHHhhc-c---cCCcch--hhh--hcCCCCCCc--ccccc-------------cceehhHhHHH
Q 007459 38 DVLYKLFCITQDPKHLMLAHLF-D---KPCFLG--LLA--LQADDISGF--HSNTH-------------IPIVIGSQMRY 94 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F-~---~~~~~~--~l~--~~~D~l~g~--hanth-------------ip~~~G~a~~Y 94 (603)
++|++.+++|||++|++.|..- + +.-+.+ .+. ..-|...|. |-.++ .=.+.|.+..|
T Consensus 180 ~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY 259 (397)
T 2zzr_A 180 QLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSY 259 (397)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHH
Confidence 6899999999999999999852 1 111100 000 001111111 10111 11347788899
Q ss_pred HHhCChhHHHHHHHHHHHHhhcceeeecCCCCCCCCCC-CcccccCCCCCccccchhHHHHHHHHHHHhhcCC---Cc--
Q 007459 95 EVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSD-PKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE---IA-- 168 (603)
Q Consensus 95 ~~Tgd~~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~-p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD---~~-- 168 (603)
+.|+|++|++.|+..-+.+.+ |. .-.|+. +|.- .+.+ +....|+.++.-+..-.-+|.+++++ .+
T Consensus 260 ~~T~d~~yL~~A~~la~~~l~-~~-~~d~~p---ywdt~~~~~----~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~ 330 (397)
T 2zzr_A 260 RKMKDYQQIILFKGMTNYFLN-RL-PEDKVS---YWDLIFTDG----SGQPRDTSATATAVCGIHEMLKYLPEVDPDKET 330 (397)
T ss_dssp HHHCCHHHHHHHHHHHHHHHH-TC-CTTSCC---BSBTTCCTT----SCCCBCHHHHHHHHHHHHHHHTTSCTTCTTHHH
T ss_pred HHHCCHHHHHHHHHHHHHHHH-hh-HHhCCc---cccCCCCCC----CCCcCCCCHHHHHHHHHHHHHHhcCccchhhHH
Confidence 999999999999998888775 43 222211 3321 1112 22333333332222223345556665 77
Q ss_pred hHHHHHHHHhc
Q 007459 169 YADYYERSLTN 179 (603)
Q Consensus 169 YaD~~ERalyN 179 (603)
|.+..|++|=.
T Consensus 331 Y~~~A~~~l~~ 341 (397)
T 2zzr_A 331 YKYAMHTMLRS 341 (397)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999887754
No 17
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=95.90 E-value=0.035 Score=59.01 Aligned_cols=133 Identities=14% Similarity=0.101 Sum_probs=74.0
Q ss_pred HHHHHHHhHcCCHHHHHHHhhcc---cCCcchh---hh--hcCCCCCCc--cccccc-------------ceehhHhHHH
Q 007459 38 DVLYKLFCITQDPKHLMLAHLFD---KPCFLGL---LA--LQADDISGF--HSNTHI-------------PIVIGSQMRY 94 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F~---~~~~~~~---l~--~~~D~l~g~--hanthi-------------p~~~G~a~~Y 94 (603)
+.|++.+++|||++|++.|..-- -...+.+ +. ...|...|. |-.++. =.+.|.+..|
T Consensus 155 ~~L~~A~~~~gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly 234 (377)
T 2ahf_A 155 PLLLWAGEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNS 234 (377)
T ss_dssp HHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHH
Confidence 69999999999999999999821 1111100 00 001111221 111211 1347889999
Q ss_pred HHhCChhHHHHHHHHHHHHhhcceeeecCCCCCCCCCCC-cccccCCCCCccccchhHHHHHHHHHHHhhcC-----CCc
Q 007459 95 EVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDP-KRLASNLDSNTEESCTTYNMLKVSRHLFRWTK-----EIA 168 (603)
Q Consensus 95 ~~Tgd~~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p-~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tg-----D~~ 168 (603)
+.|+|++|++.++..-+.+.++ . .-.|+. +|.-. ..++....+..+-.+++.+++++ .++++ +.+
T Consensus 235 ~~T~d~~yL~~A~~la~~~l~~-~-~~d~~p---ywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L----~~~~~~~~~~~~~ 305 (377)
T 2ahf_A 235 RYLGNADLLETAKRMARHFLAR-V-PEDGVV---YWDFEVPQEPSSYRDSSASAITACGLLEI----ASQLDESDPERQR 305 (377)
T ss_dssp HHHTCHHHHHHHHHHHHHHHTT-C-CTTSSC---BSBTTSCCCTTSCBCHHHHHHHHHHHHHH----HHTSCTTCHHHHH
T ss_pred HHHCChHHHHHHHHHHHHHHHh-h-HHhCCc---ccccCCCccCCCccCCCHHHHHHHHHHHH----HHhcCccccchHH
Confidence 9999999999999998888753 3 221211 33211 11211111112223444555554 44564 577
Q ss_pred hHHHHHHHHhc
Q 007459 169 YADYYERSLTN 179 (603)
Q Consensus 169 YaD~~ERalyN 179 (603)
|.+..|+++=.
T Consensus 306 Y~~~A~~~l~~ 316 (377)
T 2ahf_A 306 FIDAAKTTVTA 316 (377)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988887754
No 18
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.94 E-value=0.038 Score=60.05 Aligned_cols=145 Identities=11% Similarity=0.008 Sum_probs=85.2
Q ss_pred ccchhHHHHHHHhHcCCHHHHHHHhhcccCCcch-------hhhhcCCCCC-------Cccccccc-ceehhHhHHHHHh
Q 007459 33 AGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLG-------LLALQADDIS-------GFHSNTHI-PIVIGSQMRYEVT 97 (603)
Q Consensus 33 ~GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~-------~l~~~~D~l~-------g~hanthi-p~~~G~a~~Y~~T 97 (603)
.|-|..+|.++|+.|||++|++.|+...+ |+. .+......+. ..+.-... .+..++...|+.|
T Consensus 84 ~Gv~l~gl~~ay~~Tgd~kY~~ya~~~~d--fi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LDD~g~~~~~Li~lY~~T 161 (445)
T 3k11_A 84 WGVTYSALIAAAETTGDKRYTDYVQNRFR--FLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDDAGAVCTAMIKLRLKD 161 (445)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGGGTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHH--HHHhccchhhhhhhccCCeecccccccCCCcchhHHHHHHHHHHHHHhc
Confidence 47889999999999999999999997543 211 1111111110 00111111 1224466779999
Q ss_pred CChhHHHHHHHHHHHHhhcce-eeecCCCCCCCCCCCcccccCCCCCccccchh--HHHHHHHHHHHhhcCCCc--hHHH
Q 007459 98 GDQLHKTISMFFMDIVNSSHT-YATGGTSVGEFWSDPKRLASNLDSNTEESCTT--YNMLKVSRHLFRWTKEIA--YADY 172 (603)
Q Consensus 98 gd~~y~~aa~~fwd~v~~~h~-y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas--~nmlkl~~~Lf~~tgD~~--YaD~ 172 (603)
+|+.|++++..+++.+..+.- -..||+-- .+ ...+.-=|.. .++. +.-++-..++|++ |.|.
T Consensus 162 ~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h-----~~-------~~~~q~WiD~lyM~~p-fla~~~~~tgd~~~~y~d~ 228 (445)
T 3k11_A 162 ESLPVDGLIQNYFDFIINKEYRLADGTFAR-----NR-------PQRNTLWLDDMFMGIP-AVAQMSRYDKEAKNKYLAE 228 (445)
T ss_dssp TTCCCHHHHHHHHHHHHHTSCBCTTCCBCB-----CS-------SSTTEEETHHHHHHHH-HHHHHHHHCGGGHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCceee-----cC-------CCCCceEecchhhHHH-HHHHHHHHHCCcchHHHHH
Confidence 999999999999999875321 23355442 10 0111111222 3443 4556688999999 9998
Q ss_pred HHHHHhccccccCCCCCCCcE
Q 007459 173 YERSLTNGVLGIQRGTEPGVM 193 (603)
Q Consensus 173 ~ERalyN~vla~q~~~~~g~~ 193 (603)
+.+-+-...---.++ +.|.+
T Consensus 229 A~~q~~~~~~~l~D~-~tGL~ 248 (445)
T 3k11_A 229 AVKQFLQFADRMFIP-EKGLY 248 (445)
T ss_dssp HHHHHHHHHHHHEET-TTTEE
T ss_pred HHHHHHHHHHhcccC-CCCCE
Confidence 888665544333444 44544
No 19
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=94.43 E-value=0.072 Score=57.03 Aligned_cols=125 Identities=12% Similarity=0.001 Sum_probs=75.9
Q ss_pred hhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCccc-ccccc-----------eehhHhHHHHHhCC---h
Q 007459 36 MNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHS-NTHIP-----------IVIGSQMRYEVTGD---Q 100 (603)
Q Consensus 36 mne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~ha-nthip-----------~~~G~a~~Y~~Tgd---~ 100 (603)
+..++..||+.|||++||++|+.+.+- ++..+ ..|..+-.+. ..++| .+.|..++++.|++ +
T Consensus 251 ~i~gl~~lY~~T~d~~yL~~A~~la~~-~l~~~--~~d~~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~ 327 (397)
T 2zzr_A 251 GIYGIPLSYRKMKDYQQIILFKGMTNY-FLNRL--PEDKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPD 327 (397)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHTC--CTTSCCBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTTSCTTCTT
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHhh--HHhCCccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCccchh
Confidence 358899999999999999999886321 11111 0111111110 01111 13567788899987 7
Q ss_pred h--HHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCC
Q 007459 101 L--HKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE 166 (603)
Q Consensus 101 ~--y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD 166 (603)
+ |+++|....+.+.....-..|..+.+.--+.-+..+. ......|..|+--++.+-|.++.++
T Consensus 328 ~~~Y~~~A~~~l~~l~~~y~~~~~~~~~glL~h~~~~~~~---~~~~d~~~~~gDYy~~Eal~r~~~~ 392 (397)
T 2zzr_A 328 KETYKYAMHTMLRSLIEQYSNNELIAGRPLLLHGVYSWHS---GKGVDEGNIWGDYYYLEALIRFYKD 392 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHTBCCCCCTTCCSBCCEEEETTT---TEEEEECBHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCCCceeeeceeeCCC---CCCCCCCcchHHHHHHHHHHHHhcC
Confidence 7 9999999888887542222233333333222222222 3467788899998999888888775
No 20
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=93.66 E-value=0.16 Score=53.97 Aligned_cols=125 Identities=10% Similarity=-0.014 Sum_probs=73.9
Q ss_pred hhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCccc-------ccccc-----eehhHhHHHHHhC-----
Q 007459 36 MNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHS-------NTHIP-----IVIGSQMRYEVTG----- 98 (603)
Q Consensus 36 mne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~ha-------nthip-----~~~G~a~~Y~~Tg----- 98 (603)
+..++..||+.|+|++||+.|+.+.+- ++..+ ..|..+-.+. .-..| .+.|..++++.++
T Consensus 226 ~i~gl~~ly~~T~d~~yL~~A~~la~~-~l~~~--~~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~ 302 (377)
T 2ahf_A 226 GIYGFALNSRYLGNADLLETAKRMARH-FLARV--PEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPE 302 (377)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTC--CTTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHH
T ss_pred HHHHHHHHHHHHCChHHHHHHHHHHHH-HHHhh--HHhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHHhcCccccc
Confidence 458999999999999999999886321 00000 0111111110 00122 1356777889996
Q ss_pred ChhHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCC
Q 007459 99 DQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKE 166 (603)
Q Consensus 99 d~~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD 166 (603)
+++|+++|....+.+.+...-..|..+.+..-+.-+..+. .....+|..|+--++.+-|.++.++
T Consensus 303 ~~~Y~~~A~~~l~~l~~~y~~~~~~~~~g~L~h~~~~~~~---~~~~d~~~~ygDy~~~Eal~r~~~~ 367 (377)
T 2ahf_A 303 RQRFIDAAKTTVTALRDGYAERDDGEAEGFIRRGSYHVRG---GISPDDYTIWGDYYYLEALLRLERG 367 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHTBCCCCSSCCCSBSCBCSBTTT---TBSSSBCBHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecccccCCC---CCCCCcCccHHHHHHHHHHHHHHcC
Confidence 6789999999988886533222233343333222222221 2346778888888888888877664
No 21
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=92.58 E-value=0.15 Score=54.55 Aligned_cols=124 Identities=13% Similarity=0.093 Sum_probs=74.7
Q ss_pred hhHHHHHHHhHcCCHHHHHHHhhcc---cCCcchhhhhcCCCCCCcc-c-------------ccccceehhHhHHHHHhC
Q 007459 36 MNDVLYKLFCITQDPKHLMLAHLFD---KPCFLGLLALQADDISGFH-S-------------NTHIPIVIGSQMRYEVTG 98 (603)
Q Consensus 36 mne~L~~LY~iTGd~~yL~lA~~F~---~~~~~~~l~~~~D~l~g~h-a-------------nthip~~~G~a~~Y~~Tg 98 (603)
|.-++++.|. ||+++||++|+.-. ...+.++.. .|+| + ..+.=++.+.+. |++||
T Consensus 56 ~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~------GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg 127 (421)
T 2zbl_A 56 MLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKY------GGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTG 127 (421)
T ss_dssp HHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTT------SSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTT
T ss_pred HHHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCC------CeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhC
Confidence 4578999998 99999999998742 222322110 1222 1 111112346777 99999
Q ss_pred ChhHHHHHHHHHHHHhhcceee--ecCCCC--CCCCCCCcccccCCCCCccccchhHHH--HHHHHHHHhhcCCCchHHH
Q 007459 99 DQLHKTISMFFMDIVNSSHTYA--TGGTSV--GEFWSDPKRLASNLDSNTEESCTTYNM--LKVSRHLFRWTKEIAYADY 172 (603)
Q Consensus 99 d~~y~~aa~~fwd~v~~~h~y~--tGG~g~--~E~f~~p~~l~~~l~~~~~ETCas~nm--lkl~~~Lf~~tgD~~YaD~ 172 (603)
++.|++.++...+.+.+ |+.- .||.-. +.-+.. +.+ . .. -.-+| +.-.-+|++.++|.+|.+.
T Consensus 128 ~~~~l~~a~~~~~~l~~-~~~d~~~Ggf~~~~d~d~~~---~~~-----~-~~-~n~~m~~~~al~~l~~~tgd~~~~~~ 196 (421)
T 2zbl_A 128 HPEARKLLDYTIEVIEK-YFWSEEEQMCLESWDEAFSQ---TED-----Y-RG-GNANMHAVEAFLIVYDVTHDKKWLDR 196 (421)
T ss_dssp CTTHHHHHHHHHHHHHH-HTEETTTTEECCEECTTSCS---BCS-----C-EE-HHHHHHHHHHHHHHHHTTCCTHHHHH
T ss_pred CccHHHHHHHHHHHHHH-HhccCCCCCeeeeecCCCCc---ccc-----c-CC-CcHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 99999999998888865 6654 344321 111110 100 1 11 12222 4555678999999999999
Q ss_pred HHHHHh
Q 007459 173 YERSLT 178 (603)
Q Consensus 173 ~ERaly 178 (603)
.++++=
T Consensus 197 A~~~~~ 202 (421)
T 2zbl_A 197 ALRIAS 202 (421)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987763
No 22
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=91.91 E-value=0.3 Score=51.31 Aligned_cols=128 Identities=14% Similarity=0.152 Sum_probs=75.8
Q ss_pred HHHHHHHhHcCCHHHHHHHhhccc---CCcchhhhhcCCCCCCccccccc-------------ce---------ehhHhH
Q 007459 38 DVLYKLFCITQDPKHLMLAHLFDK---PCFLGLLALQADDISGFHSNTHI-------------PI---------VIGSQM 92 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F~~---~~~~~~l~~~~D~l~g~hanthi-------------p~---------~~G~a~ 92 (603)
..|++|+++|||++|++.|..-.+ ..++++ .+.+ -.|..++- |. +.|.++
T Consensus 150 p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~----~tGl-~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~ 224 (373)
T 1nc5_A 150 PFALKYANLKQETELFDQVVLQESLMRKHTKDA----KTGL-FYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLAD 224 (373)
T ss_dssp HHHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCT----TTSC-BCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCC----CCCC-EEeecCCccccccccccCCCCCCcccchHhHHHHHHHH
Confidence 678999999999999999976321 111111 1111 11322211 21 245677
Q ss_pred HHHH-----hCChhHHHHHHHHHHHHhhcceee-ecCCCCCCCCCCCcccc-cCCCCCccc----cchhHHHHHHHHHHH
Q 007459 93 RYEV-----TGDQLHKTISMFFMDIVNSSHTYA-TGGTSVGEFWSDPKRLA-SNLDSNTEE----SCTTYNMLKVSRHLF 161 (603)
Q Consensus 93 ~Y~~-----Tgd~~y~~aa~~fwd~v~~~h~y~-tGG~g~~E~f~~p~~l~-~~l~~~~~E----TCas~nmlkl~~~Lf 161 (603)
.|+. ++++.|++.++..-+-+.++.. . +| .|.. .+- ...+.++-| .+.++.|++..+.-+
T Consensus 225 ~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~-~~dG------~W~~--~ld~~~~~~~~~EsSatA~~ay~l~~g~~~g~ 295 (373)
T 1nc5_A 225 MIEELPKKHPNRHVWKNTLQDMIKSICRYQD-KETG------LWYQ--IVDKGDRSDNWLESSGSCLYMYAIAKGINKGY 295 (373)
T ss_dssp HGGGSCTTCHHHHHHHHHHHHHHHHHHTTSC-TTTS------CCBS--BTTCTTSTTCCBCHHHHHHHHHHHHHHHHHTS
T ss_pred HHHhCCccchhHHHHHHHHHHHHHHHHHhcC-CCCC------ceee--ecCCCCCCCCCccccHHHHHHHHHHHHHHCCC
Confidence 7887 6888899998888888876542 2 33 2331 010 112345666 344477777665532
Q ss_pred hhcCCCchHHHHHHHHhccccc
Q 007459 162 RWTKEIAYADYYERSLTNGVLG 183 (603)
Q Consensus 162 ~~tgD~~YaD~~ERalyN~vla 183 (603)
. |.+|.+..||++ ++++.
T Consensus 296 l---~~~Y~~~a~k~~-~~l~~ 313 (373)
T 1nc5_A 296 L---DRAYETTLLKAY-QGLIQ 313 (373)
T ss_dssp S---CGGGHHHHHHHH-HHHHH
T ss_pred C---cHHHHHHHHHHH-HHHHH
Confidence 2 468999999987 66555
No 23
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=91.68 E-value=0.17 Score=53.21 Aligned_cols=74 Identities=16% Similarity=0.019 Sum_probs=48.9
Q ss_pred HHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCC-CC-ccc---ccccc---------------eehhHhHHHHHhC
Q 007459 39 VLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDI-SG-FHS---NTHIP---------------IVIGSQMRYEVTG 98 (603)
Q Consensus 39 ~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l-~g-~ha---nthip---------------~~~G~a~~Y~~Tg 98 (603)
.|++++++|||++|++.|+...+-. ++..+-|.- .+ .|. ..+.+ .+.|++.+|++||
T Consensus 255 lL~~a~~~~~~~~~l~~A~~~~~~~---~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tg 331 (402)
T 1fp3_A 255 FLLRHSSRSGDAKLRAHVIDTFLLL---PFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESG 331 (402)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTHH---HHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHH---HHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhC
Confidence 5899999999999999997754311 011111110 01 111 01111 1578999999999
Q ss_pred ChhHHHHHHHHHHHHhh
Q 007459 99 DQLHKTISMFFMDIVNS 115 (603)
Q Consensus 99 d~~y~~aa~~fwd~v~~ 115 (603)
|+.|++.++..|+.+.+
T Consensus 332 d~~yl~~a~~~~~~~~~ 348 (402)
T 1fp3_A 332 DPALLRLFYQVAEYTFR 348 (402)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999998864
No 24
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=89.49 E-value=0.41 Score=50.73 Aligned_cols=129 Identities=19% Similarity=0.213 Sum_probs=76.0
Q ss_pred hh-HHHHHHHhHcCCHHHHHHHhh-ccc--CCcchhhhhcCCCCCC--cccccccc------e---------ehhHhHHH
Q 007459 36 MN-DVLYKLFCITQDPKHLMLAHL-FDK--PCFLGLLALQADDISG--FHSNTHIP------I---------VIGSQMRY 94 (603)
Q Consensus 36 mn-e~L~~LY~iTGd~~yL~lA~~-F~~--~~~~~~l~~~~D~l~g--~hanthip------~---------~~G~a~~Y 94 (603)
|+ ..|+++|++|||++|++.|.+ |.. ..++ |.-.| .|..++.. . +.|.++.|
T Consensus 174 M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l~-------D~~tGl~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l 246 (382)
T 3pmm_A 174 MTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLM-------DRETGLWFHGWNYEGRHNFARARWARGNSWLTMVIPDFL 246 (382)
T ss_dssp HTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHB-------CTTTSCBCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHcc-------CCCCCCeeeeccCCCCCCCCcceecccccHHHHHHHHHH
Confidence 55 678999999999999998844 321 1111 22222 24333222 1 25677888
Q ss_pred HH-------hCChhHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchh----HHHHHHHHHHHhh
Q 007459 95 EV-------TGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTT----YNMLKVSRHLFRW 163 (603)
Q Consensus 95 ~~-------Tgd~~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas----~nmlkl~~~Lf~~ 163 (603)
+. ++++.|++..+..-+-+.++.- .+| .|.. +.+ .+.++.||-+| +.|++..+.=+
T Consensus 247 ~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~-~~G------~W~~---~~d-~~~~y~EsSatA~~ay~ll~~~~~g~-- 313 (382)
T 3pmm_A 247 ELVDLPEGNAVRRYLITVLDAQIAALAECQD-DSG------LWHT---LLD-DPHSYLEASATAGFAYGILKAVRKRY-- 313 (382)
T ss_dssp HHHCCCTTCHHHHHHHHHHHHHHHHHHHHCC-TTS------CEES---BTT-CTTSCEEHHHHHHHHHHHHHHHHTTS--
T ss_pred HhhcCCcchhhHHHHHHHHHHHHHHHHHcCC-CCC------Chhh---ccC-CCCCCccccHHHHHHHHHHHHHHcCC--
Confidence 87 5566777777777777665442 233 4432 111 13456675554 77777666311
Q ss_pred cCCCchHHHHHHHHhccccccCC
Q 007459 164 TKEIAYADYYERSLTNGVLGIQR 186 (603)
Q Consensus 164 tgD~~YaD~~ERalyN~vla~q~ 186 (603)
- +.+|.+..||+ +++++...+
T Consensus 314 l-~~~Y~~~a~ka-~~~l~~~i~ 334 (382)
T 3pmm_A 314 V-GQHYAGVAEKA-IRGIVQNIS 334 (382)
T ss_dssp S-CGGGHHHHHHH-HHHHHHTBC
T ss_pred C-cHHHHHHHHHH-HHHHHhhCC
Confidence 1 46899999994 567776654
No 25
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=87.55 E-value=1.6 Score=48.84 Aligned_cols=163 Identities=12% Similarity=0.023 Sum_probs=81.6
Q ss_pred hcccchhHHHHHHHhHcCCHHHHHHHhhccc-----------CCcchhhhhcCCCCCCcccccccceehhHhHHHHHhCC
Q 007459 31 EEAGGMNDVLYKLFCITQDPKHLMLAHLFDK-----------PCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGD 99 (603)
Q Consensus 31 ~E~GGmne~L~~LY~iTGd~~yL~lA~~F~~-----------~~~~~~l~~~~D~l~g~hanthip~~~G~a~~Y~~Tgd 99 (603)
.|+ .+..+.+|||+.|||++||+.|..+.+ ..|++.....+ .-+..|+...---++.++++.++++|
T Consensus 304 De~-~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d~~-~r~~~d~a~~gl~~iaLl~l~~~~~d 381 (586)
T 3h7l_A 304 DEY-CALLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSANQDG-SRPYFHAAEAGLPTIALCEYLAIEDD 381 (586)
T ss_dssp HHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBSSSSS-SSBCCCTTTTTHHHHHHHHHHHHCCS
T ss_pred hHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCCcccC-CcccccccccHHHHHHHHHhhhhcCC
Confidence 445 456789999999999999999987421 12222211110 01122322111112445666789998
Q ss_pred hhHHHHH----HHHHH---HHhhc--------ceeeecCCC-CCCCCCCCcccccCCCCCc-cccchhHHHHHHHHHHHh
Q 007459 100 QLHKTIS----MFFMD---IVNSS--------HTYATGGTS-VGEFWSDPKRLASNLDSNT-EESCTTYNMLKVSRHLFR 162 (603)
Q Consensus 100 ~~y~~aa----~~fwd---~v~~~--------h~y~tGG~g-~~E~f~~p~~l~~~l~~~~-~ETCas~nmlkl~~~Lf~ 162 (603)
+.+++.+ +...+ .+.++ +.|+.+..+ ....|.-|..... ..-- .|.=...|...++.....
T Consensus 382 ~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~--~y~WqGsN~~~an~a~~~~~a~~ 459 (586)
T 3h7l_A 382 SVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNES--GYWWQGENARLGSLATMAYLAQP 459 (586)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTT--SSCCCCCHHHHHHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCC--CCeeeChHHHHHHHHHHHHHHHH
Confidence 6443332 23222 22211 145543222 2223333322100 0112 333344566667777778
Q ss_pred hcCC----CchHHHHHHHHhccccccCCCCCCCcEEEecCCCCC
Q 007459 163 WTKE----IAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPG 202 (603)
Q Consensus 163 ~tgD----~~YaD~~ERalyN~vla~q~~~~~g~~~Y~~Pl~~g 202 (603)
+++| .+|.|.....| |=|||- +| -.+.|+...+..
T Consensus 460 ~~~~~~~~~~y~~~a~~ql-dyiLG~-Np---~~~s~v~G~G~~ 498 (586)
T 3h7l_A 460 HIASQEIQQQLSVFAQDAL-NWIVGL-NP---YDMCMLDGHGRN 498 (586)
T ss_dssp GCCCHHHHHHHHHHHHHHH-HHHBTC-ST---TCCBCBTTSSSC
T ss_pred hcCCchhHHHHHHHHHHhh-hhhccC-CC---CCCccEEeeCCC
Confidence 8998 77777776554 556664 23 245666655443
No 26
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=86.21 E-value=0.88 Score=47.77 Aligned_cols=105 Identities=8% Similarity=-0.079 Sum_probs=64.3
Q ss_pred hHHHHHhCChhHHHHHHHHHHHH-hhcceee-e-cCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCC
Q 007459 91 QMRYEVTGDQLHKTISMFFMDIV-NSSHTYA-T-GGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEI 167 (603)
Q Consensus 91 a~~Y~~Tgd~~y~~aa~~fwd~v-~~~h~y~-t-GG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~ 167 (603)
+..++++||+.|+++|+...+.+ .+ +++- - ||.--.-.+. ......+.......+...+++.-+-.|++.|+|.
T Consensus 257 ~~a~~~~~~~~~l~~A~~~~~~~~~~-~~~d~~~gg~~~~~~~~--g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~ 333 (402)
T 1fp3_A 257 LRHSSRSGDAKLRAHVIDTFLLLPFR-SGWDADHGGLFYFQDAD--GLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDP 333 (402)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTHHHHH-HHBCTTTCSBCSCEETT--SCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHH-HhccCCCCCEEEeecCC--CCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCH
Confidence 34478999999999999888888 64 4443 2 5543211110 1111122334445567777888888999999999
Q ss_pred chHHHHHHHHhcccccc-CCCCCCCcEEEecCC
Q 007459 168 AYADYYERSLTNGVLGI-QRGTEPGVMIYLLPL 199 (603)
Q Consensus 168 ~YaD~~ERalyN~vla~-q~~~~~g~~~Y~~Pl 199 (603)
+|.+.+++. .+-+... .++..++.|.+..+-
T Consensus 334 ~yl~~a~~~-~~~~~~~f~D~~~G~w~~~~~~~ 365 (402)
T 1fp3_A 334 ALLRLFYQV-AEYTFRQFRDPEYGEWFGYLNRE 365 (402)
T ss_dssp HHHHHHHHH-HHHHHHHTBCTTTSSBCCEECTT
T ss_pred HHHHHHHHH-HHHHHHhCcCCCCCceEeeECCC
Confidence 999988874 3444443 233234455555543
No 27
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=77.67 E-value=12 Score=40.33 Aligned_cols=138 Identities=15% Similarity=0.118 Sum_probs=74.5
Q ss_pred HHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhc--CCCCCCcccccccceehhHhH-HHHHhCChhHHHHHHHHHHHHh
Q 007459 38 DVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQ--ADDISGFHSNTHIPIVIGSQM-RYEVTGDQLHKTISMFFMDIVN 114 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~--~D~l~g~hanthip~~~G~a~-~Y~~Tgd~~y~~aa~~fwd~v~ 114 (603)
-+-+|||+.|||++||+.|+.+..... ..... .....-...+ +..|... +.++++++.|++.++.+.+...
T Consensus 215 WAAa~Ly~aTgd~~Yl~~a~~~~~~~~--~~~~~~~~~~~~~~Wd~----~~~g~~~lla~~~~~~~~~~~~~~~~~~~~ 288 (441)
T 1ia6_A 215 WAATWLYTATNDSTYITDAEQFITLGN--TMNENKMQDKWTMCWDD----MYVPAALRLAQITGKQIYKDAIEFNFNYWK 288 (441)
T ss_dssp HHHHHHHHHHCCTHHHHHHHHHTTC--------CGGGCSSCSSSSC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHhhhh--hcccccccCCCcCCccc----hHHHHHHHHHhccCcHHHHHHHHHHHHHHH
Confidence 566799999999999999987643210 00000 0000000111 1335444 4677899999998888766554
Q ss_pred hcceeeecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCCchHHHHHHHHhccccccCCCCCCCcEE
Q 007459 115 SSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMI 194 (603)
Q Consensus 115 ~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERalyN~vla~q~~~~~g~~~ 194 (603)
..-.+--||..-.-.| ...=-+.|+.+++..-..++++.+|.+...+. .|=|||. +| -.+.
T Consensus 289 ~~~~~tp~Gl~~~~~W--------------Gs~~~~~~~a~l~~~~~~~~~~~~y~~~A~~q-ldYiLG~-NP---~~~S 349 (441)
T 1ia6_A 289 TQVTTTPGGLKWLSNW--------------GVLRYAAAESMVMLVYCKQNPDQSLLDLAKKQ-VDYILGD-NP---ANMS 349 (441)
T ss_dssp HTSCBCTTSCBCCCST--------------THHHHHHHHHHHHHHHHHHSCCHHHHHHHHHH-HHHHHTC-ST---TCCC
T ss_pred hhcccCCCCceecCCc--------------chHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH-HHHhcCC-CC---CCce
Confidence 2111222343311111 11111234555555556678888999988654 5777875 34 2356
Q ss_pred EecCCC
Q 007459 195 YLLPLA 200 (603)
Q Consensus 195 Y~~Pl~ 200 (603)
|+...+
T Consensus 350 yvvG~G 355 (441)
T 1ia6_A 350 YIIGYG 355 (441)
T ss_dssp SBTTSS
T ss_pred eEEecC
Confidence 665554
No 28
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=76.41 E-value=27 Score=32.05 Aligned_cols=92 Identities=14% Similarity=0.165 Sum_probs=57.2
Q ss_pred eeEEEecCCCceEeeecCCC--CCccccceEEEEEecCCCCCccccccCCCCceeeecCCCCCCceEEeecCceeEEEec
Q 007459 416 TKFVLTNSNQSITMEKFPKS--GTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTD 493 (603)
Q Consensus 416 ~~~~~~~~~~~~~~~~~p~~--g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~l~p~~~p~~~v~~~~~~~~l~v~~ 493 (603)
..|..+..+|.+++.+ |.. +....-.-+|.+..-+ ++.+.|.... |.|+.-..- -.|. .+
T Consensus 34 ~~y~~A~~~G~~t~~~-~~~~~~~~~~~~E~f~l~~~~-------------~~~v~LRs~~--GkYLs~~~~-G~v~-a~ 95 (155)
T 2yug_A 34 GAYIHALDNGLFTLGA-PHREVDEGPSPPEQFTAVKLS-------------DSRIALKSGY--GKYLGINSD-GLVV-GR 95 (155)
T ss_dssp SCBEEECTTSCEEECC-CCSSSSCCCCTTTCEEEEECS-------------SSCEEEEETT--SCBEEECSS-SBEE-EC
T ss_pred CCEEEEEcCCcEEEcc-ccccccCCCCCcceEEEEECC-------------CCEEEEEeCC--CCEEEecCC-CcEE-ec
Confidence 3566666677665532 322 3444556688876421 1245665543 888886542 2332 33
Q ss_pred CCCCCCCceEEEeeccCCCCCeEEEeecCCcceEEEEe
Q 007459 494 SFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTA 531 (603)
Q Consensus 494 ~~~~~~~s~f~~vpgl~g~~g~vsles~~~pg~~l~~~ 531 (603)
..+..+..+|.+++- + |.+.|++. -|+||...
T Consensus 96 a~~~g~~E~F~l~~~-~---G~~aLra~--nG~yl~~~ 127 (155)
T 2yug_A 96 SDAIGPREQWEPVFQ-D---GKMALLAS--NSCFIRCN 127 (155)
T ss_dssp CSSCCTTTBEEEECS-T---TCCEEEET--TSCBEEEC
T ss_pred cCCCCCCCEEEEEEE-C---CEEEEEeC--CCCEEEEc
Confidence 455678899999986 3 57999993 49999875
No 29
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=72.25 E-value=10 Score=40.76 Aligned_cols=134 Identities=16% Similarity=0.125 Sum_probs=73.9
Q ss_pred HHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCcccccccceehhHh-HHHHHhCChhHHHHHHHHHHHHhhc
Q 007459 38 DVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQ-MRYEVTGDQLHKTISMFFMDIVNSS 116 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~hanthip~~~G~a-~~Y~~Tgd~~y~~aa~~fwd~v~~~ 116 (603)
-+-+|||+.|||++||+.|+.+... + . .. +....+... .+..|.. .+.++++++.|++.++.|.+.+...
T Consensus 217 WAAa~Ly~aTgd~~Yl~~~~~~~~~-~-~---~~-~~~~~~~Wd---~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~ 287 (433)
T 1ks8_A 217 WAAAWLYRATNDNTYLNTAESLYDE-F-G---LQ-NWGGGLNWD---SKVSGVQVLLAKLTNKQAYKDTVQSYVNYLINN 287 (433)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHH-T-T---GG-GSCCCCCSS---CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHh-c-C---cC-cCcCCcCcc---chhhHHHHHHhhccChHHHHHHHHHHHHHHHhc
Confidence 5567999999999999999875321 1 0 00 000011011 1123433 3457789999999998888877632
Q ss_pred ceeeecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhh-cCCCchHHHHHHHHhccccccCCCCCCCcEEE
Q 007459 117 HTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRW-TKEIAYADYYERSLTNGVLGIQRGTEPGVMIY 195 (603)
Q Consensus 117 h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~-tgD~~YaD~~ERalyN~vla~q~~~~~g~~~Y 195 (603)
-.+--||..-... -...=-+.|+.+++-....+ +++.+|.+...+. .|=|||. ++ +.|
T Consensus 288 ~~~tp~Gl~~~~~--------------WGs~~~~~n~a~l~~~~~~~~~~~~~y~~~A~~q-ldYiLG~-n~-----~Sy 346 (433)
T 1ks8_A 288 QQKTPKGLLYIDM--------------WGTLRHAANAAFIMLEAAELGLSASSYRQFAQTQ-IDYALGD-GG-----RSF 346 (433)
T ss_dssp SCBCTTSCBCCCS--------------TTHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHH-HHHHHTT-TS-----SCC
T ss_pred CCcCCCCceeecC--------------CchhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHh-HhhccCC-CC-----cce
Confidence 2111122211111 11111123444555555566 7888999888654 5778886 22 356
Q ss_pred ecCCCC
Q 007459 196 LLPLAP 201 (603)
Q Consensus 196 ~~Pl~~ 201 (603)
+...+.
T Consensus 347 vvG~G~ 352 (433)
T 1ks8_A 347 VCGFGS 352 (433)
T ss_dssp BTTSSS
T ss_pred EeccCC
Confidence 655543
No 30
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=71.32 E-value=7.1 Score=41.40 Aligned_cols=120 Identities=13% Similarity=-0.014 Sum_probs=73.0
Q ss_pred chhHHHHHHHhHcCCHHHHHHHhhccc----CCc---chhhhh--cCCCCCCcccccccc--eehhHhHHHHHhCChhHH
Q 007459 35 GMNDVLYKLFCITQDPKHLMLAHLFDK----PCF---LGLLAL--QADDISGFHSNTHIP--IVIGSQMRYEVTGDQLHK 103 (603)
Q Consensus 35 Gmne~L~~LY~iTGd~~yL~lA~~F~~----~~~---~~~l~~--~~D~l~g~hanthip--~~~G~a~~Y~~Tgd~~y~ 103 (603)
|+--+|.++|+.|++++++++++...+ ..+ .|+... ..|.+ .+-=|-. ++......+++++|+.|+
T Consensus 235 GI~~~Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~~~g~wp~~~~~~~~~~---~~wChG~~Gi~~~l~~~~~~~~~~~~~ 311 (411)
T 3e6u_A 235 GIYYYLMQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLL---VHWCHGAPGVIYMLIQAYKVFREEKYL 311 (411)
T ss_dssp HHHHHHTCGGGCCCHHHHHHTHHHHHHHHHHTCCTTSCCCSBTTCCCCCC---CSSSSSHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHhhcChHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccCcc---ccccCCcHHHHHHHHHHHHHcCCHHHH
Confidence 666889999999999999988776421 111 011100 00000 0001111 112244557899999999
Q ss_pred HHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCCchHHHHHHHHh
Q 007459 104 TISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLT 178 (603)
Q Consensus 104 ~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERaly 178 (603)
+.+....+.+.+. | . + ....+=.|..-+...+..+|++.|+|++|.+..++.+-
T Consensus 312 ~~a~~~~~~~~~~-----g-~-----------~----~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~ 365 (411)
T 3e6u_A 312 CDAYQCADVIWQY-----G-L-----------L----KKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAE 365 (411)
T ss_dssp HHHHHHHHHHHHH-----C-S-----------B----TTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----C-c-----------c----CCCCceecChHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 8887776766542 1 0 0 01123345567778888999999999999999888663
No 31
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=71.08 E-value=7.1 Score=42.63 Aligned_cols=151 Identities=13% Similarity=0.054 Sum_probs=82.4
Q ss_pred hhcccchhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhh-------hcCCCCCCcccccccceehh---------HhHH
Q 007459 30 NEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLA-------LQADDISGFHSNTHIPIVIG---------SQMR 93 (603)
Q Consensus 30 ~~E~GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~-------~~~D~l~g~hanthip~~~G---------~a~~ 93 (603)
..|.|-+..=+.+|.++|||++|.+.|++..+ .++... ..-|.-.|...+.++ -+| ..+.
T Consensus 172 lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~--~l~~~~~~~GL~p~~i~~~tg~~~~~~~--~~Ga~~DS~YEYLlK~ 247 (478)
T 1nxc_A 172 LAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRT--VLNKLDKPEGLYPNYLNPSSGQWGQHHV--SVGGLGDSFYEYLLKA 247 (478)
T ss_dssp HHHHTTCHHHHHHHHHHHCCTHHHHHHHHHHH--HHHHSCCGGGCCCSEECTTTCCBCSCEE--CSSTTTHHHHHHHHHH
T ss_pred cccccchhhhHHHHHHHHCChHHHHHHHHHHH--HHHhcCCCCCccccccCCCCCCccCcee--eecCCCchHHHHHHHH
Confidence 35667777778999999999999999998743 111110 001111121112222 233 4455
Q ss_pred HHHhC--ChhHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCCchHH
Q 007459 94 YEVTG--DQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYAD 171 (603)
Q Consensus 94 Y~~Tg--d~~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD 171 (603)
|.++| |+.|++.-....+-|.+ |+.-.. . .+-.|-....-....+....=+|=.-+|+-|.-.++......+|++
T Consensus 248 ~il~g~~d~~~~~m~~~a~~~i~~-~l~~~~-~-~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~ 324 (478)
T 1nxc_A 248 WLMSDKTDLEAKKMYFDAVQAIET-HLIRKS-S-GGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYLE 324 (478)
T ss_dssp HHHTTTCCHHHHHHHHHHHHHHHH-HTEEEC-T-TSCEEECEEETTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHHH
T ss_pred HHHcCCchHHHHHHHHHHHHHHHH-HhcccC-C-CCcEEEEeccCCcccccccchhhhhHHHHHhccccccccchHHHHH
Confidence 67787 67888887777777754 443210 0 0111110000000012344568988888888776655444456777
Q ss_pred HHHHH------HhccccccCCC
Q 007459 172 YYERS------LTNGVLGIQRG 187 (603)
Q Consensus 172 ~~ERa------lyN~vla~q~~ 187 (603)
..++. +|+....+..|
T Consensus 325 ~a~~l~~tC~~~y~~~~tgl~P 346 (478)
T 1nxc_A 325 LGAEIARTCHESYNRTYVKLGP 346 (478)
T ss_dssp HHHHHHHHHHHHHHTSSSSSCC
T ss_pred HHHHHHHHHHHHHHhcccCCCC
Confidence 66543 46665555544
No 32
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=68.78 E-value=21 Score=40.14 Aligned_cols=72 Identities=19% Similarity=0.120 Sum_probs=43.3
Q ss_pred HHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCC--CCCCcccccccceehhHhHH-HHHhCChhHHHHHHHHHHHHh
Q 007459 38 DVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQAD--DISGFHSNTHIPIVIGSQMR-YEVTGDQLHKTISMFFMDIVN 114 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D--~l~g~hanthip~~~G~a~~-Y~~Tgd~~y~~aa~~fwd~v~ 114 (603)
-+-+|||+.|||++||+.|+.+... + .. ..+.. ...+.+.-. -+..|+..+ .++++++.|++.++.+.+...
T Consensus 216 WAAawLy~ATgd~~Yl~~a~~~~~~-~-~~-~~~~~~~~~~~~~~Wd--~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~ 290 (614)
T 1g87_A 216 WAAVWLYLATNDSTYLDKAESYVPN-W-GK-EQQTDIIAYKWGQCWD--DVHYGAELLLAKLTNKQLYKDSIEMNLDFWT 290 (614)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHTGGG-S-CB-CTTSSSBCCSSCCBTT--BCHHHHHHHHHHHHCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHh-h-cc-ccccccccccCCcCcc--chHHHHHHHHHhccCcHHHHHHHHHHHHHhh
Confidence 5567999999999999999876432 1 00 00000 000111000 123465554 778999999999888877654
No 33
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=63.15 E-value=37 Score=36.76 Aligned_cols=72 Identities=14% Similarity=0.036 Sum_probs=42.0
Q ss_pred HHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCC--CCCCcccccccceehhHhHH-HHHhCCh-hHHHHHHHHHHHH
Q 007459 38 DVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQAD--DISGFHSNTHIPIVIGSQMR-YEVTGDQ-LHKTISMFFMDIV 113 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D--~l~g~hanthip~~~G~a~~-Y~~Tgd~-~y~~aa~~fwd~v 113 (603)
-+-+|||+.|||++||+.|+.+... +.. ..+.. ...+.+.-. -+..|+..+ .++++++ .|++.++.+.+..
T Consensus 238 WAAawLy~ATgd~~Yl~~a~~~~~~-~~~--~~~~~~~~~~~~~~Wd--~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~ 312 (466)
T 2xfg_A 238 WAAVWLYLATNDSSYLDKAESYSDK-WGY--EPQTNIPKYKWAQCWD--DVTYGTYLLLARIKNDNGKYKEAIERHLDWW 312 (466)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHTTTT-SCB--STTSSSBCCSSCCBTT--BCHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHH-hcc--ccccccccccCcCCcc--hhHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 4567999999999999999875421 100 00000 000011000 124465554 6778877 8988888877765
Q ss_pred h
Q 007459 114 N 114 (603)
Q Consensus 114 ~ 114 (603)
.
T Consensus 313 ~ 313 (466)
T 2xfg_A 313 T 313 (466)
T ss_dssp T
T ss_pred H
Confidence 4
No 34
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=62.36 E-value=5.4 Score=43.12 Aligned_cols=100 Identities=8% Similarity=0.003 Sum_probs=57.8
Q ss_pred ceehhHhHHHHHhCChhHHHHHHHHHHHHhhcce----e--eecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHH
Q 007459 85 PIVIGSQMRYEVTGDQLHKTISMFFMDIVNSSHT----Y--ATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSR 158 (603)
Q Consensus 85 p~~~G~a~~Y~~Tgd~~y~~aa~~fwd~v~~~h~----y--~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~ 158 (603)
....|+++.|++|||++|++.++.+.+.+.+..- + -.|.+... +.. .. ...+-+-|+...+..+
T Consensus 86 v~l~gl~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~--~r~---~~---~~~~LDD~g~~~~~Li-- 155 (445)
T 3k11_A 86 VTYSALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQ--LLQ---IL---TPHALDDAGAVCTAMI-- 155 (445)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHH--HHH---HH---SCCSGGGTHHHHHHHH--
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecc--ccc---cc---CCCcchhHHHHHHHHH--
Confidence 3457899999999999999999998887653111 0 12332110 000 00 1123333555444433
Q ss_pred HHHhhcCCCchHHHHHHHHhccccccCCCCCCCcEEE
Q 007459 159 HLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIY 195 (603)
Q Consensus 159 ~Lf~~tgD~~YaD~~ERalyN~vla~q~~~~~g~~~Y 195 (603)
.+++.|+|.+|.+.++.. .+.++..+..+..|.|.+
T Consensus 156 ~lY~~T~d~~yl~~a~~~-ad~L~~~~pRt~~Ggf~h 191 (445)
T 3k11_A 156 KLRLKDESLPVDGLIQNY-FDFIINKEYRLADGTFAR 191 (445)
T ss_dssp HHHHHCTTCCCHHHHHHH-HHHHHHTSCBCTTCCBCB
T ss_pred HHHHhcCCHHHHHHHHHH-HHHHHHcCCCCCCCceee
Confidence 778899999999999654 334444442223345543
No 35
>2kll_A Interleukin-33; beta-trefoil, cytokine, polymorphism, secreted; NMR {Homo sapiens}
Probab=62.31 E-value=89 Score=28.11 Aligned_cols=113 Identities=18% Similarity=0.258 Sum_probs=69.0
Q ss_pred CCccceeeeeecCCeeEEEecCCCceEeeecCCCCCccccceEEEEEecCCCCCccccccCCCCceee--ecCCCCCCce
Q 007459 402 YNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVM--LEPFDSPGML 479 (603)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~--l~p~~~p~~~ 479 (603)
+|+|-++|.-++|.-...+.. .- +...--...||.......++ ..--+.+|+.+| |.|-- +-.
T Consensus 20 YNDQsitFv~EdgsYeIyveD---------l~--kdqekDkVLlryY~Sq~ps~--etgdgvdg~~LmVnlSP~K--Df~ 84 (161)
T 2kll_A 20 YNDQSITFALEDESYEIYVED---------LK--KDEKKDKVLLSYYESQHPSN--ESGDGVDGKMLMVTLSPTK--DFW 84 (161)
T ss_dssp TTTEEEEEEECSSCEEEEEEE---------CC--SCCCCCCEEEEEEECCCCTT--TSCCCCSCCCEEEEEESSS--SEE
T ss_pred ccCceEEEEEeCCcEEEEehh---------hc--cchhcceEEEEeccCCCCcc--ccCCCccccEEEEEccccc--cee
Confidence 566666665555443333322 11 44445567788654432221 222235777777 66654 555
Q ss_pred EEeecCceeEEEecCCCCCCCceEEEeeccCCCCCeEEEeecCCcceEEEEe
Q 007459 480 VIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTA 531 (603)
Q Consensus 480 v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~g~vsles~~~pg~~l~~~ 531 (603)
+-....+..+-+.---.+.+++.|.+.--.. +..||||-.+.||.|+-+-
T Consensus 85 LHANnkehSVELqkce~~lPdQaFFvlH~~s--s~cVSFEck~~PGvfiGVK 134 (161)
T 2kll_A 85 LHANNKEHSVELHKCEKPLPDQAFFVLHNMH--SNCVSFECKTDPGVFIGVK 134 (161)
T ss_dssp EEEETTTTEEEEEECCSSCCTTTCEEEEECS--SSCEEEEESSSTTEEEEES
T ss_pred EecCCccceeEeecccCCCCcceEEEEecCC--CceEEEEecCCCceEEEec
Confidence 5555566666555555677888888874443 5799999999999999764
No 36
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=58.26 E-value=29 Score=38.85 Aligned_cols=74 Identities=15% Similarity=-0.085 Sum_probs=42.8
Q ss_pred HHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCcccccccceehhHhHH-HHHhCChhHHHHHHHHHHHHh
Q 007459 38 DVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMR-YEVTGDQLHKTISMFFMDIVN 114 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~hanthip~~~G~a~~-Y~~Tgd~~y~~aa~~fwd~v~ 114 (603)
-+-+|||+.|||++||+.|+.+...--... ........+.|.=. -+..|+..+ .++++++.|++.++.+.+...
T Consensus 218 WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~-~~~~~~~~~~~~Wd--~~~~g~~~lla~~~~~~~y~~~a~~~~~~~~ 292 (605)
T 1tf4_A 218 WGAYWLYKATGDDSYLAKAEYEYDFLSTEQ-QTDLRSYRWTIAWD--DKSYGTYVLLAKETGKQKYIDDANRWLDYWT 292 (605)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHGGGSCBCT-TSSCBCCSSCCSSS--CCHHHHHHHHHHHHCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhccccc-cccccccccccccc--chHHHHHHHHHhccChHHHHHHHHHHHHHHh
Confidence 556799999999999999987543110000 00000000011100 023455443 678999999999998887653
No 37
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=55.47 E-value=42 Score=34.87 Aligned_cols=69 Identities=6% Similarity=-0.064 Sum_probs=50.4
Q ss_pred HhHHHHHhCChhHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCCch
Q 007459 90 SQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAY 169 (603)
Q Consensus 90 ~a~~Y~~Tgd~~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~Y 169 (603)
....|++++|+.|++.++...+.+.++ |+. ....+=.|...+++.+..+|++.++|++|
T Consensus 288 l~~~~~~~~d~~~~~~a~~~~~~~~~~-----~~~----------------~~~~~LCHG~aG~~~~l~~l~~~~~~~~~ 346 (409)
T 2g0d_A 288 YLYGGLALDNDYFVDKAEKILESAMQR-----KLG----------------IDSYMICHGYSGLIEICSLFKRLLNTKKF 346 (409)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH-----CTT----------------CCSCCTTTSHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHh-----ccC----------------CCCCCCCChHHHHHHHHHHHHHHhCCHHH
Confidence 445689999999999888888877654 110 11223334667888889999999999999
Q ss_pred HHHHHHHHhc
Q 007459 170 ADYYERSLTN 179 (603)
Q Consensus 170 aD~~ERalyN 179 (603)
.+.+++..+.
T Consensus 347 ~~~a~~~~~~ 356 (409)
T 2g0d_A 347 DSYMEEFNVN 356 (409)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHcCCc
Confidence 9998874443
No 38
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=54.75 E-value=42 Score=29.83 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=26.0
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CccCCCcEEEECCeec
Q 007459 282 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQDL 320 (603)
Q Consensus 282 ~V~l~v~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~~ 320 (603)
.|+++|+.. +....+|.+|.-. +.......|.|||+.+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (139)
T 2w87_A 40 AVVWAIDAT-SSGRRTLTIRYANGGTANRNGSLVINGGSN 78 (139)
T ss_dssp EEEEEEEES-SCEEEEEEEEEECCSSSCCCEEEEETTTTT
T ss_pred EEEEEEECC-CCcEEEEEEEEECCCCCCceEEEEECCEEc
Confidence 566677653 5677888888864 4322258999999865
No 39
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=54.38 E-value=15 Score=38.93 Aligned_cols=76 Identities=13% Similarity=-0.037 Sum_probs=49.5
Q ss_pred cchhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCcccccccc--eehhHhHHHHHhCChhHHHHHHHHHH
Q 007459 34 GGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIP--IVIGSQMRYEVTGDQLHKTISMFFMD 111 (603)
Q Consensus 34 GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~hanthip--~~~G~a~~Y~~Tgd~~y~~aa~~fwd 111 (603)
-|+..+|.++++.++|++|++.|...-+. .+. .+ .+...+..=|-- +..-..+.|+.|+|+.|++.+..+.+
T Consensus 292 ~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~--~~~--~g--~~~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~ 365 (411)
T 3e6u_A 292 PGVIYMLIQAYKVFREEKYLCDAYQCADV--IWQ--YG--LLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAE 365 (411)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHH--HHH--HC--SBTTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--HHh--cC--ccCCCCceecChHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 46779999999999999999999875321 111 00 000001111111 11225667999999999999999988
Q ss_pred HHhh
Q 007459 112 IVNS 115 (603)
Q Consensus 112 ~v~~ 115 (603)
.+.+
T Consensus 366 ~~~~ 369 (411)
T 3e6u_A 366 WCLE 369 (411)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 8765
No 40
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=51.65 E-value=16 Score=40.06 Aligned_cols=125 Identities=14% Similarity=0.067 Sum_probs=69.1
Q ss_pred hhcccchhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhh---hcCCCCC--------Ccccccccceehh-------Hh
Q 007459 30 NEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLA---LQADDIS--------GFHSNTHIPIVIG-------SQ 91 (603)
Q Consensus 30 ~~E~GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~---~~~D~l~--------g~hanthip~~~G-------~a 91 (603)
..|.|-+..=+.+|-++|||++|.+.|++..+ .++... ...+.|- |.....++-+-.| +.
T Consensus 172 ~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~~--~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEYLl 249 (511)
T 1dl2_A 172 TAEFTTLQMEFKYLAYLTGNRTYWELVERVYE--PLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLL 249 (511)
T ss_dssp HHHHSSCHHHHHHHHHHHTCHHHHHHHHTTHH--HHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHHHH
T ss_pred cccccceeeeHHHHHHHHCChHHHHHHHHHHH--HHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHHHH
Confidence 45678888889999999999999999998743 111111 0112221 2111222222111 55
Q ss_pred HHHHHhCChhHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcc--cccCC-CCCccccchhHHHHHHHH
Q 007459 92 MRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKR--LASNL-DSNTEESCTTYNMLKVSR 158 (603)
Q Consensus 92 ~~Y~~Tgd~~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~--l~~~l-~~~~~ETCas~nmlkl~~ 158 (603)
+.|.+++|+.|++.-....+-|. +|+.-.. ...+-.|-.... ..+.+ +....=+|=.-+|+-|..
T Consensus 250 K~~il~~d~~y~~m~~~a~~~i~-~~L~~~~-~~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG~~aLg~ 317 (511)
T 1dl2_A 250 KQYLLTHETLYYDLYRKSMEGMK-KHLLAQS-KPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGLLASGS 317 (511)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHH-HHTEEEC-TTTCCEEECBBTTCTTSCCBCEEEGGGGGHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHH-HHhccCC-CCCCcEEEEEeecCCCCccccccchhhhchhHHHHhcc
Confidence 66778899999988777777775 3544221 011101110000 00111 234566898888888876
No 41
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=50.00 E-value=63 Score=35.05 Aligned_cols=140 Identities=10% Similarity=-0.013 Sum_probs=73.5
Q ss_pred hcccchhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhh----hcCCCCCCccccccc------ceehh---------Hh
Q 007459 31 EEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLA----LQADDISGFHSNTHI------PIVIG---------SQ 91 (603)
Q Consensus 31 ~E~GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~----~~~D~l~g~hanthi------p~~~G---------~a 91 (603)
.|.|-+..=+.+|-++|||++|.+.|++..+ .++... ...+.|-+.+-+.+- -+-+| ..
T Consensus 162 Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~--~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLl 239 (475)
T 2ri9_A 162 AVTGTLVLEWTRLSDLTGDEEYAKLSQKAES--YLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLI 239 (475)
T ss_dssp HHHHSCHHHHHHHHHHHSCTHHHHHHHHHHH--HHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHHHH
T ss_pred hccccceeeHHHHHHHhCCHHHHHHHHHHHH--HHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHHHH
Confidence 4566677778999999999999999998742 111000 001112111111110 11233 45
Q ss_pred HHHHHhCCh--hHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCCch
Q 007459 92 MRYEVTGDQ--LHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAY 169 (603)
Q Consensus 92 ~~Y~~Tgd~--~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~Y 169 (603)
+.|.++|+. .|++.-....+-|. +|+.-.-....+=.|-....-....+....=+|=.-+|+-|.-.++. ..+|
T Consensus 240 K~~il~g~~~~~~~~m~~~a~~~i~-~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~ 315 (475)
T 2ri9_A 240 KMYVYDPKRFETYKDRWVLAAESTI-KHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSFLLGGTVLD---RQDF 315 (475)
T ss_dssp HHHHHCTTTTHHHHHHHHHHHHHHH-HHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHHHHHHHHHT---CHHH
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHH-HHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHHHhcccccc---cHHH
Confidence 667888875 67776666666664 34432211000000100000000012345668999999999987764 4567
Q ss_pred HHHHHHH
Q 007459 170 ADYYERS 176 (603)
Q Consensus 170 aD~~ERa 176 (603)
++..++.
T Consensus 316 ~~~a~~l 322 (475)
T 2ri9_A 316 IDFGLEL 322 (475)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666554
No 42
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=49.34 E-value=36 Score=37.38 Aligned_cols=28 Identities=7% Similarity=-0.020 Sum_probs=22.0
Q ss_pred HhHHHHHhCChhHHHHHHHHHHHHhhcc
Q 007459 90 SQMRYEVTGDQLHKTISMFFMDIVNSSH 117 (603)
Q Consensus 90 ~a~~Y~~Tgd~~y~~aa~~fwd~v~~~h 117 (603)
..++-++|||++|.+++++.++.+.+.+
T Consensus 182 F~~LS~LTGd~~Y~~~a~r~~~~l~~~~ 209 (511)
T 1dl2_A 182 FKYLAYLTGNRTYWELVERVYEPLYKNN 209 (511)
T ss_dssp HHHHHHHHTCHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHCChHHHHHHHHHHHHHHhcc
Confidence 3456799999999999888877776544
No 43
>2ila_A Interleukin-1 alpha; cytokine; 2.30A {Homo sapiens} SCOP: b.42.1.2 PDB: 2kki_A 2l5x_A
Probab=45.59 E-value=12 Score=34.65 Aligned_cols=26 Identities=15% Similarity=0.016 Sum_probs=21.7
Q ss_pred CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 007459 514 RTVSLESETYKGCFVYTAVNLQSSESTKLG 543 (603)
Q Consensus 514 g~vsles~~~pg~~l~~~~~~~~g~~~~l~ 543 (603)
.+.+|||+.+||||+-.. .+.-|.|.
T Consensus 114 ~~~~FESaa~PgWFI~Ts----~~qPV~Lt 139 (155)
T 2ila_A 114 TKNYFTSVAHPNLFIATK----QDYWVCLA 139 (155)
T ss_pred CeeEEEeccCCCcEEEcC----CCCCeEee
Confidence 589999999999999874 26677776
No 44
>1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A
Probab=45.07 E-value=23 Score=36.11 Aligned_cols=33 Identities=15% Similarity=0.230 Sum_probs=28.3
Q ss_pred CCCCceEEEeecc-CCCCCeEEEeecCCcceEEEEe
Q 007459 497 AQGSSVFHLVAGL-DGGDRTVSLESETYKGCFVYTA 531 (603)
Q Consensus 497 ~~~~s~f~~vpgl-~g~~g~vsles~~~pg~~l~~~ 531 (603)
..+.++|++++ + +|.+|+|+|.++ ++|.||+..
T Consensus 91 ~~~ctlFkp~~-v~~~~~~~~~f~~v-q~g~~~~~~ 124 (303)
T 1jlx_A 91 NWACTLFKPLY-VEEGNMKKVRLLHV-QLGHYTQNY 124 (303)
T ss_dssp STTCCCEEEEE-SSTTCSSEEEEEET-TTTEECEEE
T ss_pred cccccceEEEE-eccCCCceEEEEEE-ecCceEEee
Confidence 45678999998 7 788999999995 999999854
No 45
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=45.04 E-value=1.7e+02 Score=26.06 Aligned_cols=38 Identities=21% Similarity=0.264 Sum_probs=26.2
Q ss_pred EEEEEEEeCCCCeeeEEEEecc-CCccCCCcEEEECCeec
Q 007459 282 RVTLTFSSKGSGLTTSLNLRIP-TWTSSNGAKATLNGQDL 320 (603)
Q Consensus 282 ~V~l~v~~~~~~~~ftL~LRIP-~Wa~~~~~~v~VNG~~~ 320 (603)
.|+++|+.. +....+|.+|.- +........|.|||+.+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (145)
T 2w3j_A 40 SIVWSLSAA-SAKTYTAQIRFGNGGTSARRATVVVNDSQI 78 (145)
T ss_dssp EEEEEEEES-SCEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC-CCeEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 567777653 567788888886 34222257999999875
No 46
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=44.45 E-value=19 Score=39.78 Aligned_cols=95 Identities=17% Similarity=0.154 Sum_probs=55.4
Q ss_pred ehhHhHHHHHhCChhHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchh-HHHHHH-HHHHHhhc
Q 007459 87 VIGSQMRYEVTGDQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTT-YNMLKV-SRHLFRWT 164 (603)
Q Consensus 87 ~~G~a~~Y~~Tgd~~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas-~nmlkl-~~~Lf~~t 164 (603)
+=|..-.|.++||+.|++.|...=+.+..---..||---..=.+... .+. ......++|.+ .+.|.+ -.+|-++|
T Consensus 175 LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~g--~~~-~~~~~~~s~lAe~GSl~LEF~~LS~LT 251 (538)
T 1x9d_A 175 LGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTG--VAH-PPRWTSDSTVAEVTSIQLEFRELSRLT 251 (538)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSTTSCCCSEEETTTC--CEE-CCTTCSEEEHHHHHSSHHHHHHHHHHH
T ss_pred hhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeeeccc--ccC-CCCcCCCceeccccceeeeHHHHHHHh
Confidence 35788889999999999988887777753222334432221111110 000 01112346655 222222 34588999
Q ss_pred CCCchHHHHHHHHhccccccC
Q 007459 165 KEIAYADYYERSLTNGVLGIQ 185 (603)
Q Consensus 165 gD~~YaD~~ERalyN~vla~q 185 (603)
||++|.|..+|+ ++.+...+
T Consensus 252 Gd~~Y~~~a~r~-~~~l~~~~ 271 (538)
T 1x9d_A 252 GDKKFQEAVEKV-TQHIHGLS 271 (538)
T ss_dssp CCTHHHHHHHHH-HHHHHTCS
T ss_pred CCcHHHHHHHHH-HHHHHhcc
Confidence 999999999987 35555444
No 47
>2wry_A IL-1 beta, interleukin-1BETA; immune system, pyrogen, mitogen, inflammatory response; 1.58A {Gallus gallus} PDB: 3nj5_A
Probab=43.72 E-value=17 Score=34.01 Aligned_cols=36 Identities=25% Similarity=0.467 Sum_probs=26.0
Q ss_pred EEEeeccCCCCCeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 007459 503 FHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLG 543 (603)
Q Consensus 503 f~~vpgl~g~~g~vsles~~~pg~~l~~~~~~~~g~~~~l~ 543 (603)
||-..|. ..+.+|||+.+||||+-.. ...+.-|.|.
T Consensus 111 yr~~~G~---~~~~tfESaa~PgWFI~Ts--~~~~qPV~Lt 146 (162)
T 2wry_A 111 YRLDSPT---EGTTRFESAAFPGWFICTS--LQPRQPVGIT 146 (162)
T ss_dssp EEEEETT---TTEEEEEESSSTTCEEEBC--SSSSEECEEE
T ss_pred EEecCCC---CCceEEEeccCCCcEEEcC--CCCCeEEEee
Confidence 4444664 3699999999999999864 2246667776
No 48
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=43.53 E-value=1.4e+02 Score=26.22 Aligned_cols=38 Identities=18% Similarity=0.210 Sum_probs=23.2
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CccCCCcEEEECCeec
Q 007459 282 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQDL 320 (603)
Q Consensus 282 ~V~l~v~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~~ 320 (603)
.|+++|+.. +....+|.+|.=. -.......|.|||+.+
T Consensus 41 ~v~~~V~v~-~aG~Y~l~~ryan~~~~~~~~~l~VNG~~~ 79 (144)
T 2w47_A 41 YIEWNVNAP-SSGSYALIFRYANGTTANRPMRITVNGNIV 79 (144)
T ss_dssp EEEEEEEES-SSEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC-CCcEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 566666653 4566777777622 1111257899999863
No 49
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=43.13 E-value=28 Score=37.74 Aligned_cols=87 Identities=13% Similarity=0.029 Sum_probs=57.9
Q ss_pred HHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCcccccccc-----eehhHhHHHHHhCChhHHHHHHHHHHH
Q 007459 38 DVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIP-----IVIGSQMRYEVTGDQLHKTISMFFMDI 112 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~hanthip-----~~~G~a~~Y~~Tgd~~y~~aa~~fwd~ 112 (603)
.++++-|++++|+..++++.-+.+.--++.+.. +.....-.|.+-+ .+.++..+|+.|+++.|++.|+..=++
T Consensus 380 l~~vra~~~s~D~~Lw~~~~~ma~~~~lgdi~~--~~~~~~~~~~~~~~~sp~lL~allEL~~atq~~~~l~lA~~~g~n 457 (543)
T 2v8i_A 380 ISYARAYAIDNDPLLWKVARGIANDQGLGDIGT--APGKEVKVNMDTTNSDPYALFALLDLYHASQVADYRKLAEKIGDN 457 (543)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHHHTTCEECTT--BTTBSCEECTTCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhCCccccCC--CcCcccccccCCCCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 789999999999999999988754322222211 0000011122222 346788899999999999988888888
Q ss_pred HhhcceeeecCCCCC
Q 007459 113 VNSSHTYATGGTSVG 127 (603)
Q Consensus 113 v~~~h~y~tGG~g~~ 127 (603)
+.+ +.|.-|=+-.+
T Consensus 458 l~~-~~~~~G~Fv~s 471 (543)
T 2v8i_A 458 IIK-IRYIDGFFMAS 471 (543)
T ss_dssp HHH-HHEETTEECSS
T ss_pred HHH-HhhcCceecCC
Confidence 875 66766655443
No 50
>2nvh_A IL-1 beta, interleukin-1 beta, catabolin; water, hydration, protein folding, cytokine; 1.53A {Homo sapiens} SCOP: b.42.1.2 PDB: 1iob_A 1itb_A 2i1b_A 2kh2_A 1i1b_A 4i1b_A 5i1b_A 6i1b_A 7i1b_A 9ilb_A 4dep_A* 3o4o_A* 1twm_A 1twe_A 1s0l_A 1too_A 1t4q_A 41bi_A 21bi_A 1hib_A ...
Probab=42.91 E-value=11 Score=34.91 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=22.1
Q ss_pred CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 007459 514 RTVSLESETYKGCFVYTAVNLQSSESTKLG 543 (603)
Q Consensus 514 g~vsles~~~pg~~l~~~~~~~~g~~~~l~ 543 (603)
.+.+|||+.+||||+-.. ...+.-|.|.
T Consensus 108 ~~~~fESaa~PgWFI~Ts--~~~~qPV~Lt 135 (153)
T 2nvh_A 108 NKLEFESAQFPNWYISTS--QAENMPVFLG 135 (153)
T ss_dssp TEEEEEESSSTTCEEEBC--SSTTEECEEE
T ss_pred CeeEEEeccCCCcEEecC--CCCCeEEEee
Confidence 699999999999999864 2246677776
No 51
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=42.68 E-value=22 Score=38.75 Aligned_cols=132 Identities=14% Similarity=0.119 Sum_probs=70.1
Q ss_pred HHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCcccccccce-------ehhHhHHHHHhCChhHHHHHHHHH
Q 007459 38 DVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPI-------VIGSQMRYEVTGDQLHKTISMFFM 110 (603)
Q Consensus 38 e~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~hanthip~-------~~G~a~~Y~~Tgd~~y~~aa~~fw 110 (603)
|+|-=||=. |...-++-|..+....+.. -.+..+++ +=|..-.|.++||+.|++.|...=
T Consensus 68 DsLDTL~IM-gl~~Ef~~A~~~v~~~l~f------------~~~~~vsvFETtIR~LGGLLSAy~Lsgd~~lL~kA~dLa 134 (478)
T 1nxc_A 68 DALDTLFIM-GMKTEFQEAKSWIKKYLDF------------NVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAVELG 134 (478)
T ss_dssp HHHHHHHHT-TCHHHHHHHHHHHHHHCCC------------CCSSEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred ecccceeec-CCHHHHHHHHHHHHhhcCc------------cCCCccchhheehhhhhhhhhhhhccCCHHHHHHHHHHH
Confidence 777777754 5555555555443221100 01223443 347888899999999998888877
Q ss_pred HHHhhcceeeecCCCCCCCCCCCcccccCCC-CCccccchh-HHHHHH-HHHHHhhcCCCchHHHHHHHHhccccccC
Q 007459 111 DIVNSSHTYATGGTSVGEFWSDPKRLASNLD-SNTEESCTT-YNMLKV-SRHLFRWTKEIAYADYYERSLTNGVLGIQ 185 (603)
Q Consensus 111 d~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~-~~~~ETCas-~nmlkl-~~~Lf~~tgD~~YaD~~ERalyN~vla~q 185 (603)
+.+..---..||---..=.+... .+.... ....++|.+ .+.|.+ -.+|-++|||++|.|..+|+ .+.+...+
T Consensus 135 d~LlpAFdTptgiP~~~vnl~~g--~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~-~~~l~~~~ 209 (478)
T 1nxc_A 135 VKLLPAFHTPSGIPWALLNMKSG--IGRNWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKI-RTVLNKLD 209 (478)
T ss_dssp HHHGGGGCSSSSCCCSEEETTTC--CEECCTTSGGGCEEHHHHTTCHHHHHHHHHHHCCTHHHHHHHHH-HHHHHHSC
T ss_pred HHHHHhhcCCCCCCcceeecccc--cCCCCcccCCCCcccccccchhhhHHHHHHHHCChHHHHHHHHH-HHHHHhcC
Confidence 77753322334322111111110 000000 112234433 222221 25688999999999999986 45444333
No 52
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=41.73 E-value=65 Score=35.24 Aligned_cols=140 Identities=14% Similarity=-0.025 Sum_probs=74.0
Q ss_pred hcccchhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhh---cCCCCCCccccccc------ceehh---------HhH
Q 007459 31 EEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLAL---QADDISGFHSNTHI------PIVIG---------SQM 92 (603)
Q Consensus 31 ~E~GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~---~~D~l~g~hanthi------p~~~G---------~a~ 92 (603)
.|.|-+..=+.+|-++|||++|.+.|++..+ .++.... ..+.|-+.+-+.+- -+-+| ..+
T Consensus 176 Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~--~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK 253 (503)
T 1hcu_A 176 AEIGSLVLEWTRLSDLTGNPQYAQLAQKGES--YLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYLIK 253 (503)
T ss_dssp HHHTTSHHHHHHHHHHHSCTHHHHHHHHHHH--HHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHHHHH
T ss_pred ccccceeeehHHHHHHhCChHHHHHHHHHHH--HHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHHHHHH
Confidence 5667777779999999999999999998742 1110000 01111111111111 11233 556
Q ss_pred HHHHhCCh--hHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCCchH
Q 007459 93 RYEVTGDQ--LHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYA 170 (603)
Q Consensus 93 ~Y~~Tgd~--~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~Ya 170 (603)
.|.++|+. .|++.-....+-|. +|+.-.-....+=.|-....-....+....=+|=.-+|+-|.-.++. ..+|+
T Consensus 254 ~~il~g~~~~~y~~m~~~a~~~i~-~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~~ 329 (503)
T 1hcu_A 254 MYLYDPVAFAHYKDRWVLGADSTI-GHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNFILGGILLN---EQKYI 329 (503)
T ss_dssp HHHHCTTTTHHHHHHHHHHHHHHH-HHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHHHHHHHHHT---CHHHH
T ss_pred HHHHcCCchHHHHHHHHHHHHHHH-HHhccCCCCCCCceEEEeccCCccccccchhhhhhhHHHHhcCcccc---cHHHH
Confidence 67888875 67776666666664 34432211000000100000000012345678999999999987764 45666
Q ss_pred HHHHHH
Q 007459 171 DYYERS 176 (603)
Q Consensus 171 D~~ERa 176 (603)
+..++.
T Consensus 330 ~~a~~L 335 (503)
T 1hcu_A 330 DFGIKL 335 (503)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666553
No 53
>1md6_A Interleukin 1 family, member 5 (delta); beta triple, alpha helix, immune system; 1.60A {Mus musculus} SCOP: b.42.1.2
Probab=41.48 E-value=11 Score=34.95 Aligned_cols=27 Identities=33% Similarity=0.562 Sum_probs=21.5
Q ss_pred eEEEeecCCcceEEEEeeccCCCCcEEEE
Q 007459 515 TVSLESETYKGCFVYTAVNLQSSESTKLG 543 (603)
Q Consensus 515 ~vsles~~~pg~~l~~~~~~~~g~~~~l~ 543 (603)
+.+|||+.+||||+-.. ...++-|.|.
T Consensus 107 ~~tfESaa~PgWFI~Ts--~~~~qPV~Lt 133 (154)
T 1md6_A 107 TSSFESAAYPGWFLCTS--PEADQPVRLT 133 (154)
T ss_dssp CEEEEESSSTTCEEEBC--SSSSEECEEE
T ss_pred eEEEEeccCCCcEEecC--CCCCeEEEee
Confidence 89999999999999863 2346677776
No 54
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=41.05 E-value=2.4e+02 Score=31.37 Aligned_cols=174 Identities=10% Similarity=-0.067 Sum_probs=0.0
Q ss_pred HHHHHHHhhhcccchhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhh------cCCCCCCcccccccceehhHhHHHH
Q 007459 22 IERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLAL------QADDISGFHSNTHIPIVIGSQMRYE 95 (603)
Q Consensus 22 ~~~~~~~l~~E~GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~------~~D~l~g~hanthip~~~G~a~~Y~ 95 (603)
+|..|+ -+|||+.|||+.||+.|+......-...... +.+..........-...-|...++.
T Consensus 355 DEl~WA------------AawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~Wd~~~~~~~~lla~ 422 (609)
T 1ut9_A 355 DEFYWA------------ACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGEDNGLWGCFTWGTTQGLGTITLAL 422 (609)
T ss_dssp HHHHHH------------HHHHHHHHCCHHHHHHHHTSTTTTCCCSBCC----SSGGGTTCBSSCCSSCCHHHHHHHHHH
T ss_pred cHHHHH------------HHHHHHHhCCHHHHHHHHHhhhcccchhhhccccccccccccCccccchhhhHHHHHHHHHh
Q ss_pred HhCC------hhHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCCch
Q 007459 96 VTGD------QLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAY 169 (603)
Q Consensus 96 ~Tgd------~~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~Y 169 (603)
++.. +.+++..+.+-+.....-..-..|+.-...-..|..+ ...-.=-+.|..+++-..+.++++.+|
T Consensus 423 ~~~~l~~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~~~~~~~t~gg~------~WGs~~~~~n~a~~~~~a~~~~~~~~y 496 (609)
T 1ut9_A 423 VENGLPATDIQKARNNIAKAADRWLENIEEQGYRLPIKQAEDERGGY------PWGSNSFILNQMIVMGYAYDFTGDSKY 496 (609)
T ss_dssp SCCSSCHHHHHHHHHHHHHHHHHHHHHHHTCTTCCSCCCCSSSSCSC------CTTHHHHHHHHHHHHHHHHHHHCCTHH
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHhhccCCCCccccccccCCCCc------ccccCHHHHHHHHHHHHHHHhcChHHH
Q ss_pred HHHHHHHHhccccccCCCCCCCcEEEecCCCCCCCCccCcCCCCCCCCC
Q 007459 170 ADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDS 218 (603)
Q Consensus 170 aD~~ERalyN~vla~q~~~~~g~~~Y~~Pl~~g~~k~~~~~~~~t~~~~ 218 (603)
.|... .-.|=|||. .+..+.|+...+....+....|.|..+.++
T Consensus 497 ~~~A~-~qidYiLG~----NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~ 540 (609)
T 1ut9_A 497 LDGMF-DGISYLLGR----NAMDQSYVTGYGERPLQNPHDRFWTPQTSK 540 (609)
T ss_dssp HHHHH-HHHHHHBTC----STTCCBCBBTCSSSCBCCCBCSSSCTTTCT
T ss_pred HHHHH-HHHHhccCC----CCCCceEEEecCCCCCCCCccccccccccc
No 55
>1ilt_A Interleukin-1 receptor antagonist; cytokine; 2.00A {Homo sapiens} SCOP: b.42.1.2 PDB: 1ilr_1 1ira_X* 2irt_A 1irp_A
Probab=37.20 E-value=13 Score=34.41 Aligned_cols=27 Identities=33% Similarity=0.519 Sum_probs=21.2
Q ss_pred eEEEeecCCcceEEEEeeccCCCCcEEEE
Q 007459 515 TVSLESETYKGCFVYTAVNLQSSESTKLG 543 (603)
Q Consensus 515 ~vsles~~~pg~~l~~~~~~~~g~~~~l~ 543 (603)
+.+|||+.+||||+-.. ...+.-|.|.
T Consensus 108 ~~~fESaa~PgWFI~Ts--~~~~~PV~Lt 134 (152)
T 1ilt_A 108 TTSFESAACPGWFLCTA--MEADQPVSLT 134 (152)
T ss_pred ceEEEeccCCCcEEEcC--CcCCeEEEee
Confidence 89999999999999864 2235667776
No 56
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=37.10 E-value=81 Score=34.66 Aligned_cols=75 Identities=15% Similarity=0.059 Sum_probs=49.9
Q ss_pred HhHHHHHhCC------hhHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhh
Q 007459 90 SQMRYEVTGD------QLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRW 163 (603)
Q Consensus 90 ~a~~Y~~Tgd------~~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~ 163 (603)
+|..+++-++ ++++++|+..|+...++..-. +..+.. .....|+.+.-.=+++.=+-.|++.
T Consensus 252 lA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~---------~~~~~~---~~~~~Y~~~~~~Del~wAA~~Ly~a 319 (537)
T 3gzk_A 252 MAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQP---------FHNPDG---ILTGEYGDAELRDELLWASCALLRM 319 (537)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCC---------CCCCTT---CCSCCCCCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhccccc---------ccCCcc---cccCCcCCCccchHHHHHHHHHHHH
Confidence 4444667666 688999999999987654311 111100 0112344455556678888899999
Q ss_pred cCCCchHHHHHHH
Q 007459 164 TKEIAYADYYERS 176 (603)
Q Consensus 164 tgD~~YaD~~ERa 176 (603)
|+|.+|.++++..
T Consensus 320 Tgd~~Yl~~a~~~ 332 (537)
T 3gzk_A 320 TGDSAWARVCEPL 332 (537)
T ss_dssp HCCGGGHHHHHHH
T ss_pred hCCHHHHHHHHHh
Confidence 9999999999874
No 57
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=35.37 E-value=72 Score=35.22 Aligned_cols=156 Identities=11% Similarity=0.022 Sum_probs=83.7
Q ss_pred hcccchhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCcccccc------c-ceehh---------HhHHH
Q 007459 31 EEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTH------I-PIVIG---------SQMRY 94 (603)
Q Consensus 31 ~E~GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~hanth------i-p~~~G---------~a~~Y 94 (603)
.|.|-+..=+.+|-++|||++|.+.|++..+ .++......+.|-+.+-+.+ - -+-+| ..+.|
T Consensus 235 Ae~GSl~LEF~~LS~LTGd~~Y~~~a~r~~~--~l~~~~~~~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~ 312 (538)
T 1x9d_A 235 AEVTSIQLEFRELSRLTGDKKFQEAVEKVTQ--HIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQW 312 (538)
T ss_dssp HHHHSSHHHHHHHHHHHCCTHHHHHHHHHHH--HHHTCSCCBTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHHH
T ss_pred ccccceeeeHHHHHHHhCCcHHHHHHHHHHH--HHHhcccCCCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHHH
Confidence 4667777779999999999999999998642 11111000111111111111 0 12233 45567
Q ss_pred HHhC--ChhHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCC-CCCccccchhHHHHHHHHHHHhhcCCCchHH
Q 007459 95 EVTG--DQLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNL-DSNTEESCTTYNMLKVSRHLFRWTKEIAYAD 171 (603)
Q Consensus 95 ~~Tg--d~~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l-~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD 171 (603)
.++| |+.|++.-....+-|. +|++-....+ +-.|-.... .+.+ +....=+|=.-+|+-|...++. +.+|++
T Consensus 313 il~g~~d~~y~~my~~a~~~i~-~~L~~~~~~~-~~~~v~~~~-~g~~~~~~~hL~cF~gG~~aLgg~~~~---~~~~l~ 386 (538)
T 1x9d_A 313 IQGGKQETQLLEDYVEAIEGVR-THLLRHSEPS-KLTFVGELA-HGRFSAKMDHLVCFLPGTLALGVYHGL---PASHME 386 (538)
T ss_dssp HHTTSCCHHHHHHHHHHHHHHH-HHTEEECTTT-CCEEECEEE-TTEEECEEEGGGGHHHHHHHHHHHTTC---CHHHHH
T ss_pred HHcCCchHHHHHHHHHHHHHHH-HHhccCCCCC-CceEEEecc-CCccCcccchHhhhhhhHHHhcCcccC---cHHHHH
Confidence 8888 7888887777777775 3543221110 000100000 0011 2445678999999999887653 345666
Q ss_pred HHHHH------HhccccccCCCCCCCcEEEecC
Q 007459 172 YYERS------LTNGVLGIQRGTEPGVMIYLLP 198 (603)
Q Consensus 172 ~~ERa------lyN~vla~q~~~~~g~~~Y~~P 198 (603)
..++. +|+....+..| ..+++++
T Consensus 387 ~a~~L~~tC~~~Y~~~~tGl~P----E~~~~~~ 415 (538)
T 1x9d_A 387 LAQELMETCYQMNRQMETGLSP----EIVHFNL 415 (538)
T ss_dssp HHHHHHHHHHHHHHTSTTSCCC----SEEECCS
T ss_pred HHHHHHHHHHHHHHhcccCCCc----eEEEecc
Confidence 55443 45555444444 3455544
No 58
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=33.58 E-value=28 Score=36.23 Aligned_cols=70 Identities=6% Similarity=-0.197 Sum_probs=42.9
Q ss_pred cchhHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCcccccccce--ehhHhHHHHHhCChhHHHHHHHH
Q 007459 34 GGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPI--VIGSQMRYEVTGDQLHKTISMFF 109 (603)
Q Consensus 34 GGmne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~hanthip~--~~G~a~~Y~~Tgd~~y~~aa~~f 109 (603)
.|+-.++.++|+.++|++|++.|+...+...- . ......+.-=|-.. +.-....|+.|+|+.|++.+..|
T Consensus 282 ~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~~~~----~--~~~~~~~~LCHG~aG~~~~l~~l~~~~~~~~~~~~a~~~ 353 (409)
T 2g0d_A 282 PGISLLYLYGGLALDNDYFVDKAEKILESAMQ----R--KLGIDSYMICHGYSGLIEICSLFKRLLNTKKFDSYMEEF 353 (409)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----H--CTTCCSCCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH----h--ccCCCCCCCCChHHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence 46678999999999999999999976432110 0 00000011111111 11155668999999998877763
No 59
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=33.17 E-value=4.4e+02 Score=28.60 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=37.4
Q ss_pred CCCceEEeecCceeEEEecCCCCCCCceEEEeeccCCCCCeEEEeecCCcceEEEEe
Q 007459 475 SPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTA 531 (603)
Q Consensus 475 ~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~g~vsles~~~pg~~l~~~ 531 (603)
.-|.|+.-.+..-.|.+..+...+.+.+|.++- ..+.|+|++. .|+||...
T Consensus 226 ~~GkYL~~~g~~g~L~~~~~~~~g~~E~F~L~~----~~~qVaL~s~--ngkyVsa~ 276 (493)
T 3llp_A 226 CEGRYLAPSGPSGTLKAGKATKVGKDELFALEQ----SCAQVVLQAA--NERNVSTR 276 (493)
T ss_dssp TTSCBEEEETTTTEEEECC---CCGGGCEEEEE----CCCEEEEECT--TSCEEECC
T ss_pred CCCCEEeEECCCCeEEeccCCCCCCceEEEEEe----CCCEEEEEec--CCcEEEec
Confidence 667888887766566554455667799999996 3689999987 89999763
No 60
>3ltq_A Interleukin-1 beta; lanthanide binding TAG, LBT, terbium, IL1B, cytokine, inflam response, mitogen, pyrogen, secreted; 2.10A {Homo sapiens} SCOP: b.42.1.2
Probab=30.77 E-value=22 Score=33.45 Aligned_cols=28 Identities=18% Similarity=0.347 Sum_probs=21.4
Q ss_pred CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 007459 514 RTVSLESETYKGCFVYTAVNLQSSESTKLG 543 (603)
Q Consensus 514 g~vsles~~~pg~~l~~~~~~~~g~~~~l~ 543 (603)
.+.+|||+.+||||+-.. ...++.|.|.
T Consensus 126 s~stFESaa~PGWFI~Ts--~~~~qPV~Lt 153 (171)
T 3ltq_A 126 NKLEFESAQFPNWYISTS--QAENMPVFLG 153 (171)
T ss_dssp TEEEEEESSSTTCEEEBC--SSTTEECEEE
T ss_pred CceEEEecCCCCCEEeec--CCCCeeEEee
Confidence 478999999999999863 2245567776
No 61
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=28.38 E-value=1.4e+02 Score=33.22 Aligned_cols=134 Identities=7% Similarity=-0.015 Sum_probs=73.1
Q ss_pred hhHHHHHHHhH-----cCCHHHHHHHhhccc---CCcchhhhhcCCCCCCcccccccceehhHhHHHHHhCChhHHHHHH
Q 007459 36 MNDVLYKLFCI-----TQDPKHLMLAHLFDK---PCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKTISM 107 (603)
Q Consensus 36 mne~L~~LY~i-----TGd~~yL~lA~~F~~---~~~~~~l~~~~D~l~g~hanthip~~~G~a~~Y~~Tgd~~y~~aa~ 107 (603)
|.-+|+.-+++ .+.++||+.|+...+ .. ..... ++.-.+. ....-.+-|++.+|+.|||+.|++.++
T Consensus 255 ~aAALA~Asrvf~d~~~~a~~~L~aA~~a~~fa~~~-~~~y~--~~g~~~~--~De~~~~WAA~eLy~ATgd~~YL~~a~ 329 (586)
T 3h7l_A 255 AIAALAAASRLGVHGEYDQQKYRNAAENGYWHLKEH-NTQYL--NDGEENI--IDEYCALLASVELFKATKETRYLEESR 329 (586)
T ss_dssp HHHHHHHHTTSSSCSSSCHHHHHHHHHHHHHHHHHH-HHHHS--TTSCCCH--HHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCcChHHHHHHHHHHHHHHHhc-Ccccc--CCCCccc--hhHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 45788888888 667899999997531 00 01111 1110110 111112578889999999999999998
Q ss_pred HHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchhHHHHHHHHHHHhhcCCCchHHHHHHHHhccc
Q 007459 108 FFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGV 181 (603)
Q Consensus 108 ~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERalyN~v 181 (603)
.+-+.+..+ ..... . .+=+|+.+++-.... .... =++..++-|++ |...++|.++.+.++..+-+++
T Consensus 330 ~~a~~l~~~-~~~~~-~-~g~~w~~~d~~~r~~-~d~a--~~gl~~iaLl~-l~~~~~d~~~~~~a~~~i~~~~ 396 (586)
T 3h7l_A 330 LWAQRLVAR-QMSDE-Q-IQHFWSANQDGSRPY-FHAA--EAGLPTIALCE-YLAIEDDSVQTESVKCIVNRAC 396 (586)
T ss_dssp HHHHHHHTT-EECCS-S-CSSEEBSSSSSSSBC-CCTT--TTTHHHHHHHH-HHHHCCSTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHh-ccCCc-c-CCCcCCCcccCCccc-cccc--ccHHHHHHHHH-hhhhcCChHHHHHHHHHHHHHh
Confidence 888877643 22211 1 112354433211100 1111 14555555554 4577888766666655555443
No 62
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=25.81 E-value=69 Score=34.76 Aligned_cols=133 Identities=12% Similarity=0.059 Sum_probs=72.5
Q ss_pred ccch----hHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCcccccccce-------ehhHhHHHHHh-CC-
Q 007459 33 AGGM----NDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPI-------VIGSQMRYEVT-GD- 99 (603)
Q Consensus 33 ~GGm----ne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~hanthip~-------~~G~a~~Y~~T-gd- 99 (603)
+||+ .|+|-=|+-. |...-++-|..+... +.. |. .+..+.+ +=|..-.|.++ ||
T Consensus 41 ~gg~g~TlVDsLDTL~IM-gl~~Ef~~a~~~v~~-~~f------~~-----~~~~vsvFETtIR~LGGLLSAy~Ls~g~~ 107 (475)
T 2ri9_A 41 RNGWGASAVDALSTAVIM-GKADVVNAILEHVAD-IDF------SK-----TSDTVSLFETTIRYLAGMLSGYDLLQGPA 107 (475)
T ss_dssp TTTSCHHHHHHHHHHHHH-TCHHHHHHHHHHHHH-CCT------TC-----CSSCEEHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCcceeehhhccchhhc-CCHHHHHHHHHHHHh-CCC------Cc-----CCCccchhheehHhHhHHhHHHHhccCcc
Confidence 5664 3888777754 555555555544331 100 00 0233443 34788889999 87
Q ss_pred ----------hhHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchh-HHHHHH-HHHHHhhcCCC
Q 007459 100 ----------QLHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTT-YNMLKV-SRHLFRWTKEI 167 (603)
Q Consensus 100 ----------~~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas-~nmlkl-~~~Lf~~tgD~ 167 (603)
+.+++.|...=+.+..---..||---..=.+... -.....++|.+ .+.|.+ -.+|-++|||+
T Consensus 108 ~~~~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~~~vnl~~~------~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~ 181 (475)
T 2ri9_A 108 KNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNINITSH------GNDGATTNGLAVTGTLVLEWTRLSDLTGDE 181 (475)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEECTTTC------CBCCCSEEEHHHHHSCHHHHHHHHHHHSCT
T ss_pred ccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCceeecccC------CCcCCCccchhccccceeeHHHHHHHhCCH
Confidence 6888877777777653323344433222222110 01123345544 222222 24688999999
Q ss_pred chHHHHHHHHhccccccC
Q 007459 168 AYADYYERSLTNGVLGIQ 185 (603)
Q Consensus 168 ~YaD~~ERalyN~vla~q 185 (603)
+|.|..+|+ ++.+...+
T Consensus 182 ~Y~~~a~~~-~~~l~~~~ 198 (475)
T 2ri9_A 182 EYAKLSQKA-ESYLLKPQ 198 (475)
T ss_dssp HHHHHHHHH-HHHHHSCS
T ss_pred HHHHHHHHH-HHHHHhhc
Confidence 999999987 45554443
No 63
>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A
Probab=25.25 E-value=89 Score=27.77 Aligned_cols=33 Identities=24% Similarity=0.114 Sum_probs=22.8
Q ss_pred EEEECCeecCCCCCCCEEEEEeecCCCCEEEEEecceeEEEe
Q 007459 312 KATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEA 353 (603)
Q Consensus 312 ~v~VNG~~~~~~~~ggy~~I~R~W~~GD~I~L~Lpm~lr~~~ 353 (603)
.|+|||+.+... + .=+.||+|+|.++-..+...
T Consensus 35 ~V~VNG~~vk~s----~-----~V~~GD~I~I~~~~~~~~~~ 67 (133)
T 1dm9_A 35 KVHYNGQRSKPS----K-----IVELNATLTLRQGNDERTVI 67 (133)
T ss_dssp CEEETTEECCTT----C-----BCCTTCEEEEEETTEEEEEE
T ss_pred cEEECCEEcCCC----C-----EeCCCCEEEEEeCCceeeEE
Confidence 689999975321 2 11579999999987665544
No 64
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=23.96 E-value=1.3e+02 Score=29.07 Aligned_cols=56 Identities=18% Similarity=0.243 Sum_probs=35.2
Q ss_pred eeeEEEEecc-CCccC--CCcEEEECCeecCCCC-CCCEEEEE-----------eecCCCCEEEEEeccee
Q 007459 294 LTTSLNLRIP-TWTSS--NGAKATLNGQDLPLPS-PGNFLSVT-----------KTWSSDDKLTIQLPLTL 349 (603)
Q Consensus 294 ~~ftL~LRIP-~Wa~~--~~~~v~VNG~~~~~~~-~ggy~~I~-----------R~W~~GD~I~L~Lpm~l 349 (603)
....|.+++| .+.+. -+-.|.|||....... .++.+.++ ..|+.||.|.|+-.|++
T Consensus 20 ~~~~l~i~~~~~~~~~l~~g~SIAvnGvcLTV~~v~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLEral~~ 90 (213)
T 1i8d_A 20 NFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKF 90 (213)
T ss_dssp SEEEEEEECCGGGTTTCCTTCEEEETTEEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTCEEEEEECCBT
T ss_pred CcEEEEEEEChHHhccCCCCcEEEECCEEeeEEEEcCCEEEEEEeHHHHhhcccccCCCCCEEEeCcCCCC
Confidence 3456777777 34221 2578999998765432 34455554 34889999888866643
No 65
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, lumazine PR riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}
Probab=23.92 E-value=1.5e+02 Score=28.09 Aligned_cols=56 Identities=9% Similarity=0.139 Sum_probs=31.5
Q ss_pred eeeEEEEeccCCccC---CCcEEEECCeecCCCC-CCCEEEEE----------eecCCCCEEEEEeccee
Q 007459 294 LTTSLNLRIPTWTSS---NGAKATLNGQDLPLPS-PGNFLSVT----------KTWSSDDKLTIQLPLTL 349 (603)
Q Consensus 294 ~~ftL~LRIP~Wa~~---~~~~v~VNG~~~~~~~-~ggy~~I~----------R~W~~GD~I~L~Lpm~l 349 (603)
....|.++.|..... -+-.|.|||.-..... .++.+.++ ..|+.||.|.|+-.|++
T Consensus 20 ~~~~l~i~~~~~~~~~~~~GdSIAvnGvCLTV~~~~~~~f~vdv~ETl~~T~Lg~l~~G~~VNLEral~~ 89 (186)
T 3ddy_A 20 DSQRHGIAFPEGMFQLVDVDTVMLVNGCSNTVVRILGDMVYFDIDQALGTTTFDGLKEGDQVNLEIHPKF 89 (186)
T ss_dssp SCEEEEEECCTTTGGGCCTTCEEEETTEEEEEEEEETTEEEEEECTTTTTSSGGGCCTTCEEEEECCC--
T ss_pred CcEEEEEEeChHHhccCCCCCeEEEeeEEEEEEEEcCCEEEEEhHHhhhhCchhhcCCCCEEEECCCCCC
Confidence 445677778765211 1578899998665432 23344443 24677777766655543
No 66
>2x2s_A Agglutinin, agglutinin SSA; fungal lectin, beta-trefoil domain, cell adhesion; 1.60A {Sclerotinia sclerotiorum} PDB: 2x2t_A*
Probab=23.53 E-value=1.4e+02 Score=27.26 Aligned_cols=45 Identities=4% Similarity=-0.025 Sum_probs=33.7
Q ss_pred CCCceEEEee-ccCCCCCeEEEeecCCcceEEEEe-eccCCCCcEEEE
Q 007459 498 QGSSVFHLVA-GLDGGDRTVSLESETYKGCFVYTA-VNLQSSESTKLG 543 (603)
Q Consensus 498 ~~~s~f~~vp-gl~g~~g~vsles~~~pg~~l~~~-~~~~~g~~~~l~ 543 (603)
.++..|||.| |-+| +|+..+|++..+|.=+-+. ..-..|.+|..-
T Consensus 92 ~~~~rWrI~~~G~~~-~G~f~I~nk~~s~~vldV~~~~t~~GAdVi~~ 138 (153)
T 2x2s_A 92 DPSARWTIKPATTHQ-YEVFTINNKVSELGQLTVKDYSTHSGADVLSA 138 (153)
T ss_dssp CGGGCEEEEESCC---CCCEEEEESSGGGCEEEEGGGCCSTTCBEEEE
T ss_pred CccceEEEEeccccC-cceEEEecccCCCceEEeccCCCCCCceEEEe
Confidence 3889999998 8899 7999999999999888643 334567777554
No 67
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=23.06 E-value=53 Score=35.95 Aligned_cols=137 Identities=12% Similarity=0.070 Sum_probs=72.8
Q ss_pred ccch----hHHHHHHHhHcCCHHHHHHHhhcccCCcchhhhhcCCCCCCcccccccce-------ehhHhHHHHHhCCh-
Q 007459 33 AGGM----NDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPI-------VIGSQMRYEVTGDQ- 100 (603)
Q Consensus 33 ~GGm----ne~L~~LY~iTGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~hanthip~-------~~G~a~~Y~~Tgd~- 100 (603)
+||+ .|+|-=|+-. |...-++-|..+... +.. |.. ...+..+.+ +=|..-.|.++||+
T Consensus 51 ~gg~g~TlVDsLDTL~IM-gl~~Ef~~A~~~v~~-l~f------~~~--~~~~~~VsvFETtIR~LGGLLSAy~Ls~~~~ 120 (503)
T 1hcu_A 51 RNGWGSSAIDGLDTAILM-GDADIVNTILQYVPQ-INF------TTT--AVANQGSSVFETNIRYLGGLLSAYDLLRGPF 120 (503)
T ss_dssp TTTSCHHHHHHHHHHHHT-TCHHHHHHHHHHGGG-CCT------TCC--SSTTCCEEHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCcceeehhhccchhhc-CCHHHHHHHHHHHHh-CCC------Ccc--cccCCccchheeehhhHhHHHHHHHHccCcc
Confidence 5664 3778777765 555555555544431 110 000 001223443 34788889999995
Q ss_pred -----------hHHHHHHHHHHHHhhcceeeecCCCCCCCCCCCcccccCCCCCccccchh-HHHHHH-HHHHHhhcCCC
Q 007459 101 -----------LHKTISMFFMDIVNSSHTYATGGTSVGEFWSDPKRLASNLDSNTEESCTT-YNMLKV-SRHLFRWTKEI 167 (603)
Q Consensus 101 -----------~y~~aa~~fwd~v~~~h~y~tGG~g~~E~f~~p~~l~~~l~~~~~ETCas-~nmlkl-~~~Lf~~tgD~ 167 (603)
.+++.|...=+.+..---..||---..=.|... -. .....++|.+ .+.|.+ -.+|-++|||+
T Consensus 121 ~~~~~~~~~~~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~~--~~---~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~ 195 (503)
T 1hcu_A 121 SSLATNQTLVNSLLRQAQTLANGLKVAFTTPSGVPDPTVFFNPT--VR---RSGASSNNVAEIGSLVLEWTRLSDLTGNP 195 (503)
T ss_dssp GGGCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEEECSSS--CE---ECCCSEEEHHHHTTSHHHHHHHHHHHSCT
T ss_pred ccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccC--CC---CCCCCccccccccceeeehHHHHHHhCCh
Confidence 888877777777653222334432221111110 00 1123355654 222222 24688999999
Q ss_pred chHHHHHHHHhccccccC
Q 007459 168 AYADYYERSLTNGVLGIQ 185 (603)
Q Consensus 168 ~YaD~~ERalyN~vla~q 185 (603)
+|.|..+|+ ++.+...+
T Consensus 196 ~Y~~~a~~~-~~~l~~~~ 212 (503)
T 1hcu_A 196 QYAQLAQKG-ESYLLNPK 212 (503)
T ss_dssp HHHHHHHHH-HHHHHSCC
T ss_pred HHHHHHHHH-HHHHHhhh
Confidence 999999987 44554443
No 68
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=20.56 E-value=1.4e+02 Score=32.83 Aligned_cols=76 Identities=9% Similarity=0.011 Sum_probs=46.8
Q ss_pred cchhHHHHHHHhHcCC------HHHHHHHhhccc-----CCcchhhhhcCCCCCCcccccccc--eehhHhHHHHHhCCh
Q 007459 34 GGMNDVLYKLFCITQD------PKHLMLAHLFDK-----PCFLGLLALQADDISGFHSNTHIP--IVIGSQMRYEVTGDQ 100 (603)
Q Consensus 34 GGmne~L~~LY~iTGd------~~yL~lA~~F~~-----~~~~~~l~~~~D~l~g~hanthip--~~~G~a~~Y~~Tgd~ 100 (603)
|-|--+|+.-+++-++ +++|+-|+...+ +... .....+...+.|..+..- .+-+++-+|+.|||+
T Consensus 246 ~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~--~~~~~~~~~~~Y~~~~~~Del~wAA~~Ly~aTgd~ 323 (537)
T 3gzk_A 246 ATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQP--FHNPDGILTGEYGDAELRDELLWASCALLRMTGDS 323 (537)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCC--CCCCTTCCSCCCCCSCCHHHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhccccc--ccCCcccccCCcCCCccchHHHHHHHHHHHHhCCH
Confidence 4455788888888887 899999997532 1110 000112222333211111 356788999999999
Q ss_pred hHHHHHHHHHH
Q 007459 101 LHKTISMFFMD 111 (603)
Q Consensus 101 ~y~~aa~~fwd 111 (603)
.|++.++..++
T Consensus 324 ~Yl~~a~~~~~ 334 (537)
T 3gzk_A 324 AWARVCEPLLD 334 (537)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 99998877654
No 69
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=20.44 E-value=3.9e+02 Score=22.58 Aligned_cols=38 Identities=24% Similarity=0.150 Sum_probs=22.3
Q ss_pred EEEEEEEeCCCCeeeEEEEeccC-CccCCCcEEEECCeec
Q 007459 282 RVTLTFSSKGSGLTTSLNLRIPT-WTSSNGAKATLNGQDL 320 (603)
Q Consensus 282 ~V~l~v~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~~ 320 (603)
.|+++|+.. .....+|.+|.=. ........|.|||+.+
T Consensus 40 ~v~~~V~v~-~aG~Y~l~~rya~~~~~~~~~~l~VnG~~~ 78 (127)
T 2vzp_A 40 SVEWTVTVP-SAGTYDVVVRYANGTTTSRPLDFSVNGSIS 78 (127)
T ss_dssp EEEEEEEES-SSEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEEcC-CCCEEEEEEEEEcCCCCCeEEEEEECCEEe
Confidence 456666553 4556666666632 1111258899999874
No 70
>2k6p_A Uncharacterized protein HP_1423; alpha-L motif, RNA-binding, unknown function; NMR {Helicobacter pylori}
Probab=20.27 E-value=81 Score=25.71 Aligned_cols=33 Identities=12% Similarity=0.070 Sum_probs=21.9
Q ss_pred EEEECCeecCCCCCCCEEEEEeecCCCCEEEEEecceeEEEe
Q 007459 312 KATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEA 353 (603)
Q Consensus 312 ~v~VNG~~~~~~~~ggy~~I~R~W~~GD~I~L~Lpm~lr~~~ 353 (603)
.|+|||+.+.. ++. =+.||+|+|.+|-+.....
T Consensus 27 ~V~VNg~~~~~----~~~-----v~~gd~I~v~~~~~~~~~~ 59 (92)
T 2k6p_A 27 AVWLNGSCAKA----SKE-----VKAGDTISLHYLKGIEEYT 59 (92)
T ss_dssp CCEETTEECCT----TCB-----CCTTCEEEECCSSCCEEEE
T ss_pred cEEECCEEcCC----CCC-----cCCCCEEEEEeCCceEEEE
Confidence 48999997532 121 1579999998877655433
Done!