Query 007460
Match_columns 603
No_of_seqs 192 out of 343
Neff 4.0
Searched_HMMs 46136
Date Thu Mar 28 23:54:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007460.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007460hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02768 AMP deaminase 100.0 8E-184 2E-188 1514.4 50.9 574 1-596 1-587 (835)
2 PLN03055 AMP deaminase; Provis 100.0 2E-115 4E-120 953.8 35.4 346 244-596 2-354 (602)
3 KOG1096 Adenosine monophosphat 100.0 3E-116 6E-121 953.5 28.7 397 198-600 83-528 (768)
4 TIGR01429 AMP_deaminase AMP de 100.0 7E-110 1E-114 911.7 33.1 342 248-595 1-374 (611)
5 PTZ00310 AMP deaminase; Provis 100.0 3E-105 6E-110 923.8 32.5 356 232-600 689-1054(1453)
6 cd01319 AMPD AMP deaminase (AM 100.0 4.5E-99 1E-103 813.6 23.6 256 334-595 1-263 (496)
7 PTZ00310 AMP deaminase; Provis 100.0 6.5E-93 1.4E-97 820.9 32.4 343 228-596 58-417 (1453)
8 COG1816 Add Adenosine deaminas 98.6 4.4E-09 9.5E-14 111.3 -2.4 132 449-587 2-133 (345)
9 cd00443 ADA_AMPD Adenosine/AMP 98.2 7E-07 1.5E-11 92.0 2.7 102 392-557 2-113 (305)
10 PF00962 A_deaminase: Adenosin 96.7 0.00012 2.7E-09 75.2 -3.5 128 390-556 1-144 (331)
11 cd01321 ADGF Adenosine deamina 85.6 4.4 9.5E-05 43.5 9.3 62 495-557 66-140 (345)
12 cd01320 ADA Adenosine deaminas 70.4 3.8 8.3E-05 42.4 3.2 53 390-442 1-58 (325)
13 TIGR01430 aden_deam adenosine 62.6 5 0.00011 41.7 2.2 25 392-416 2-26 (324)
14 PTZ00124 adenosine deaminase; 61.5 23 0.0005 38.5 7.1 129 391-557 35-174 (362)
15 PF01726 LexA_DNA_bind: LexA D 57.0 8.9 0.00019 32.0 2.4 31 406-445 8-38 (65)
16 PF05871 ESCRT-II: ESCRT-II co 51.8 32 0.0007 33.0 5.5 50 492-543 57-113 (139)
17 PRK09358 adenosine deaminase; 46.1 13 0.00028 39.0 2.1 28 389-416 8-35 (340)
18 PRK13361 molybdenum cofactor b 42.1 1.7E+02 0.0037 31.0 9.6 113 406-554 75-193 (329)
19 KOG4741 Uncharacterized conser 36.7 25 0.00055 34.9 2.3 62 427-492 86-147 (173)
20 COG1908 FrhD Coenzyme F420-red 29.6 75 0.0016 30.5 4.1 41 491-538 69-115 (132)
21 CHL00082 psbZ photosystem II p 29.5 45 0.00098 28.3 2.4 19 4-22 3-21 (62)
22 PRK10219 DNA-binding transcrip 28.1 57 0.0012 28.5 2.9 34 404-445 1-34 (107)
23 cd08588 PI-PLCc_At5g67130_like 26.4 94 0.002 32.6 4.6 52 396-447 63-124 (270)
24 PF07521 RMMBL: RNA-metabolisi 25.1 89 0.0019 23.9 3.1 26 398-426 12-37 (43)
25 KOG4068 Uncharacterized conser 24.8 1.4E+02 0.003 30.0 5.1 44 498-543 68-118 (174)
26 PF07304 SRA1: Steroid recepto 23.9 1.6E+02 0.0034 28.7 5.3 37 330-366 43-82 (157)
27 PRK02576 psbZ photosystem II r 22.2 75 0.0016 27.1 2.4 19 4-22 3-21 (62)
28 TIGR03043 PS_II_psbZ photosyst 21.3 72 0.0016 26.8 2.1 18 5-22 1-18 (58)
29 KOG1097 Adenine deaminase/aden 20.3 1E+02 0.0023 34.5 3.7 99 492-601 114-235 (399)
No 1
>PLN02768 AMP deaminase
Probab=100.00 E-value=7.7e-184 Score=1514.41 Aligned_cols=574 Identities=80% Similarity=1.205 Sum_probs=540.6
Q ss_pred CchhhHHHHHHHHhhhhHHHHHHHHHHHHhHHHHHHHHHHhhcccCCCCCcCCCCccccccccchhccccccCCCCCccc
Q 007460 1 MDAYTLHLAMAALVGASVVAVSAYYMHRKTLTQLLEFAKSVERERDDNSDAAESPHHVKRHGCAAARRCSSRRKGSGYYR 80 (603)
Q Consensus 1 m~~~~l~lAmAALvGAS~~A~sa~y~H~rtv~qvl~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 80 (603)
|.+|+||||||||||||+|||||||||||||||||++|+|+||++...+.++.+ ++.+++|+++||
T Consensus 1 ~~~~~l~la~aalvgas~~a~~a~~~h~~~~~q~~~~~~~~~r~~~~~~~~~~~--------------~~~~~~~~~~~~ 66 (835)
T PLN02768 1 MEPYALHLALAALVGASFVAVSAYYMHRKTLDQLLEFAKTLDRNREGDEPQNPT--------------SQVRRKGNDYYR 66 (835)
T ss_pred CchhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccCCc--------------cccccCCccccc
Confidence 679999999999999999999999999999999999999999987555443322 345568999999
Q ss_pred cccCCCCCceecccCCcCCcccC-CCCccccCCCCCCCCcccCCCC-CccccCCCccccccccCcCCCCC--cccccccc
Q 007460 81 RCSASLPDVTAISGHAVDGEERR-NGPLHVDGIPAGLPRLHTLPEG-KSAGHASSTKRAGNLIRPTSPKS--PVASAFES 156 (603)
Q Consensus 81 ~~s~slP~~~~~~~~~~~~~~~~-~~~~~~~~IP~GLP~L~t~~~g-~~~~~~~~~~~~~~~~r~~~p~s--~~~~~~~~ 156 (603)
|||+||||++++++++.++...+ +.++++++||+|||||||+|+| |+.+++||++|+|+++||||||| |+||||||
T Consensus 67 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ip~glp~l~t~~~~~~~~~~~~s~~r~~~~~r~~~p~s~~~~~~a~~~ 146 (835)
T PLN02768 67 RGSASLPDATAFSGGGDDGDEPRDGHHVYVDGIPPGLPRLHTGPEGKASVHGAGSTKRVGSFIRPTSPKSPVASASAFES 146 (835)
T ss_pred cccccCCCcccccCCCCCCCccccCcccccCCCCCCCCCCccCCCCCCcccCccccccccccccCCCCCCCCcccchhhh
Confidence 99999999999994443333333 4678999999999999999996 67899999999999999999999 55699999
Q ss_pred ccCCccccccccCCCCcccccccCCCCCCCCCcccccchhH--hhhccccccccccCCCCCCCCCccchhhhhcCcccCC
Q 007460 157 VEGSDEEDNMTDSSKLDTTYLLTNGNAGPNLPDHMNVNAEA--IAASSMIRSHSVSGDLHGVQPDPIAADILRKEPEQET 234 (603)
Q Consensus 157 ~~~sd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~rs~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (603)
+||||||++++.+++.|++|+++||+.+. ++++..||++ +++..||||+++.||||++||||.+++||+|+||+++
T Consensus 147 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (835)
T PLN02768 147 VEGSDDEDNLTDNEKLDTTYLHTNGNVEL--PDHADANGEQIPIPASSMIRSHSVSGDLHGVQPDPIAADILRKEPEQET 224 (835)
T ss_pred ccCCccccccCCcccccchhhccCCCCCC--ccccccCcccccccchhceeccccCCccccCCCCchHHHHhhcCchhhh
Confidence 99999999999999999999999999885 7888899988 7889999999999999999999999999999999999
Q ss_pred cceeeeCCCCCCChhHHHHHHHHHHHHHhhhccCCCCCCCcccccccCCCCCCCCCCCCCccCCCCCCCceEEeeCcEEE
Q 007460 235 FARLQITPKEVPSPDEMEAYVVLQECLEMRKRYLFREAVAPWEKEMISDPSTPKPNPDPFYYAPVGKSDHHFEMQDGVIH 314 (603)
Q Consensus 235 f~Rv~I~~~~~p~~d~~~a~~~l~~aL~LR~kY~~~~~~~~~~~~~~~~~~~p~p~~~p~~~~~~~~~~~~f~~~dGV~~ 314 (603)
||||.|+|.|+|.+|++++++.|.+||.||+||||.....+|+.....++.+|+|.++||.+.++++++++|+|+||||+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~ky~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 304 (835)
T PLN02768 225 FVRLNITPLEVPSPDEVEAYKVLQECLELRKRYVFREEVAPWEKEIISDPSTPKPNPNPFSYTPEGKSDHYFEMQDGVVH 304 (835)
T ss_pred hhccccccCCCccHHHHHHHHHHHHHHHHHHHHccCCCCCCccccccCCCCCCCCCCCCcccCCCCCCCeEEEecCCEEE
Confidence 99999999999999999999999999999999999888899988877788889999999999989999999999999999
Q ss_pred EecCCCCCcccCCCCChHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhcCCCCCCcccceee
Q 007460 315 VYPNKDSKEELYPVADATTFFTDLHHILRVIALGNMRTLCHHRLLLLEQKFNLHLMLNADKEFLAQKSAPHRDFYNVRKV 394 (603)
Q Consensus 315 v~~~~~~~~~~~pip~~~eF~~D~~~l~~~i~~gp~ksfc~rRL~~Le~KF~Lh~lLN~~~E~~e~K~vphRDFYNvrKV 394 (603)
||++.+..+..+|+|||++|+.|++.|+++|++||++|||++||+|||+||+||++||+++|..++|++|||||||||||
T Consensus 305 v~~~~~~~~~~~p~~~~~~F~~D~~~l~~~i~dg~~ksfc~~RL~~Le~Kf~Lh~lLN~~~E~~~~K~~phrDFYnvrKV 384 (835)
T PLN02768 305 VYANKDSKEELFPVADATTFFTDLHHILRVIAAGNIRTLCHHRLNLLEQKFNLHLMLNADREFLAQKSAPHRDFYNVRKV 384 (835)
T ss_pred EeeCCCCCcccCCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhcchhhhHhhccCCCCCceeeeEe
Confidence 99888777788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCHHHHHHHHHHHhccCCCceEEccCCccccHHHHHHhCCCCCCcccccccccccCCCccccccccccCCC
Q 007460 395 DTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYN 474 (603)
Q Consensus 395 DthVH~SacMnqKhLL~FIk~Kl~~epd~vV~~~dGk~~TLkevFe~l~lt~~dLtVD~Ldvhad~~tFhRFD~Fn~KyN 474 (603)
||||||||||||||||+|||+|++++||+||+.++|+.+||+|||+++++++|+||||+|||||+++||||||+||+|||
T Consensus 385 Dthvh~sacMnqk~LLrFIk~kl~~epd~vV~~~dGk~~TL~evFe~l~lt~ydLsVD~Ldvha~~~tfhRfDkFn~kyn 464 (835)
T PLN02768 385 DTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYN 464 (835)
T ss_pred eccchhhccCCHHHHHHHHHHHHhcCCCceeeccCCccccHHHHHHHcCCcccCCcccccccCCCccccccccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHhhcccCCCCchhHHHHHHHHHHHHhhhcccceeEEEEEEecCChhHHHHHHHHHHHCCCCCCCceEEEEec
Q 007460 475 PCGQSRLREIFLKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNELYSENVVWLIQVW 554 (603)
Q Consensus 475 P~G~s~LReiFLktDN~i~GrYlAEL~K~Vi~~LE~sKYQ~aE~RlSIYGrs~~EW~kLA~Wv~~~~L~S~nnRWlIQIP 554 (603)
|+|+++||+|||||||+|+|||||||||+||+++|++|||+|||||||||++++||++||+|+++|||+|.||||+||||
T Consensus 465 P~G~s~LReiFLktDN~i~GrYfAELiK~V~~dlE~sKyQ~aE~RlsIYGr~~~EW~kLA~W~v~~~l~S~nvRWlIQIP 544 (835)
T PLN02768 465 PCGQSRLREIFLKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNELYSENVVWLIQLP 544 (835)
T ss_pred ccchHHHHHHHcCcCCCCChhhHHHHHHHHHHHHHhccceeeEEEEEecCCCHHHHHHHHHHHHHcCCCCCCceEEEEcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhccccccccccccccHHHHhhhccccccc-------cCchhhHHH
Q 007460 555 ISMFLKSHHRCYEMLVMQNFSFWIKCNVCFPLL-------SHLYMHVCA 596 (603)
Q Consensus 555 Rly~~~~~~~~~~~g~~~nF~~~l~~NIF~PLf-------~~~~~~~~~ 596 (603)
|+|.+ +++.|.|+||||||+ |||+||| +||.||.|-
T Consensus 545 RlY~i-----~k~~g~v~nFqd~L~-NIF~PLFeATl~P~~hp~L~~FL 587 (835)
T PLN02768 545 RLYNV-----YKEMGIVTSFQNILD-NIFIPLFEVTVDPDSHPQLHVFL 587 (835)
T ss_pred cchhh-----hhcCCccCCHHHHHH-HHHHHHHHHhcCCccCHHHHHHH
Confidence 99976 558899999999995 9999999 778888763
No 2
>PLN03055 AMP deaminase; Provisional
Probab=100.00 E-value=1.6e-115 Score=953.83 Aligned_cols=346 Identities=76% Similarity=1.209 Sum_probs=333.0
Q ss_pred CCCChhHHHHHHHHHHHHHhhhccCCCCCCCcccccccCCCCCCCCCCCCCccCCCCCCCceEEeeCcEEEEecCCCCCc
Q 007460 244 EVPSPDEMEAYVVLQECLEMRKRYLFREAVAPWEKEMISDPSTPKPNPDPFYYAPVGKSDHHFEMQDGVIHVYPNKDSKE 323 (603)
Q Consensus 244 ~~p~~d~~~a~~~l~~aL~LR~kY~~~~~~~~~~~~~~~~~~~p~p~~~p~~~~~~~~~~~~f~~~dGV~~v~~~~~~~~ 323 (603)
+.|..+++++++.|++||.||++|+|.+...|| ++.+.++.+|.+.+|||.+.++++++++|+|+||||+||.+++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~v~~~~~~~~ 80 (602)
T PLN03055 2 DAPSDEEEEVCAMMQECLELRDKYLFREKLPPW-RKGIFESSTSKPNPDPFRYEPEPPSQHVFRMVDGVMHVYAPDDAKE 80 (602)
T ss_pred CCCChHHHHHHHHHHHHHHhhhhhcccCCCCcc-ccCCCCCCCCCCCCCCCCCCCCCCCCeeEEEeCCEEEEecCCcCCC
Confidence 457789999999999999999999999999999 5556778889999999999999999999999999999999877778
Q ss_pred ccCCCCChHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhcCCCCCCcccceeeccccccccc
Q 007460 324 ELYPVADATTFFTDLHHILRVIALGNMRTLCHHRLLLLEQKFNLHLMLNADKEFLAQKSAPHRDFYNVRKVDTHVHHSAC 403 (603)
Q Consensus 324 ~~~pip~~~eF~~D~~~l~~~i~~gp~ksfc~rRL~~Le~KF~Lh~lLN~~~E~~e~K~vphRDFYNvrKVDthVH~Sac 403 (603)
..+|+||+++|+.|++.|+++|++||++|||++||+|||+||+||++||+++|..++|++||||||||||||||||||||
T Consensus 81 ~~~~~p~~~~f~~D~~~l~~~~~~g~~~s~~~~RL~~Le~kf~L~~~lN~~~E~~~~k~~p~rDFyn~rKVDthvh~s~c 160 (602)
T PLN03055 81 ELFPVPDATTFFTDMHRILRIVSLGNVRTFCHHRLKLLEQKFSLHLMLNADREFLAQKSAPHRDFYNVRKVDTHVHHSSC 160 (602)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhccCCCCCceeeeEeecccccccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHhccCCCceEEccCCccccHHHHHHhCCCCCCcccccccccccCCCccccccccccCCCCCchhHHHH
Q 007460 404 MNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLRE 483 (603)
Q Consensus 404 MnqKhLL~FIk~Kl~~epd~vV~~~dGk~~TLkevFe~l~lt~~dLtVD~Ldvhad~~tFhRFD~Fn~KyNP~G~s~LRe 483 (603)
|||||||||||+|++++||+||+.++|+.+||+|||+++|+++|+||||+|||||+++||||||+||+||||+|+++||+
T Consensus 161 m~qk~LL~FIk~k~~~~pd~vV~~~~gk~~TL~evfe~l~~~~~dLtVd~Ldvha~~~~fhrfD~fn~kynp~g~s~Lr~ 240 (602)
T PLN03055 161 MNQKHLLRFIKSKLRKEPDEVVIFRDGKYLTLREVFESLDLTGYDLNVDLLDVHADKNTFHRFDKFNLKYNPCGQSRLRE 240 (602)
T ss_pred CCHHHHHHHHHHHHHcCCCcEeecCCCcchhHHHHHHHcCCCcccCcccccCccCCCCcccccccccccCCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCchhHHHHHHHHHHHHhhhcccceeEEEEEEecCChhHHHHHHHHHHHCCCCCCCceEEEEeccchhhcccc
Q 007460 484 IFLKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNELYSENVVWLIQVWISMFLKSHH 563 (603)
Q Consensus 484 iFLktDN~i~GrYlAEL~K~Vi~~LE~sKYQ~aE~RlSIYGrs~~EW~kLA~Wv~~~~L~S~nnRWlIQIPRly~~~~~~ 563 (603)
|||||||+|+|||||||||+||+++|++|||+||+||||||++++||++||+|+++|||+|.||||+|||||+|.+
T Consensus 241 iFLktdN~i~G~YlAel~k~v~~~le~skyQ~~E~rlsiYG~~~~EW~kLA~W~~~~~l~s~n~rW~IqiPRly~~---- 316 (602)
T PLN03055 241 IFLKQDNLIQGRFLAELTKEVFSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNRLYSENVVWLIQLPRLYNV---- 316 (602)
T ss_pred HHcCcCCCcchhhHHHHHHHHHHHHHhccceeEEEEEEEeCCCHHHHHHHHHHHHHcCcCCCCceEEEecCcchhh----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred ccccccccccHHHHhhhccccccc-------cCchhhHHH
Q 007460 564 RCYEMLVMQNFSFWIKCNVCFPLL-------SHLYMHVCA 596 (603)
Q Consensus 564 ~~~~~g~~~nF~~~l~~NIF~PLf-------~~~~~~~~~ 596 (603)
+++.|.|+||||||+ |||.||| +||.||.|-
T Consensus 317 -~~~~g~v~~Fqd~L~-NIF~PLFeatl~P~~hp~L~~fL 354 (602)
T PLN03055 317 -YKEMGIVQSFQQILD-NIFKPLFEVTVDPSSHPQLHVFL 354 (602)
T ss_pred -hhcCCCcCCHHHHHH-HHHHHHHHHHcCcccCHHHHHHH
Confidence 458899999999995 9999999 777888763
No 3
>KOG1096 consensus Adenosine monophosphate deaminase [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.6e-116 Score=953.54 Aligned_cols=397 Identities=50% Similarity=0.767 Sum_probs=341.8
Q ss_pred hhhccccccccccCCCC--CCCC-Ccc--chhhhh---cCcccCCcceeeeCC---CCCCChhHHHHHHHHHHHHHhhhc
Q 007460 198 IAASSMIRSHSVSGDLH--GVQP-DPI--AADILR---KEPEQETFARLQITP---KEVPSPDEMEAYVVLQECLEMRKR 266 (603)
Q Consensus 198 ~~~~~~~rs~s~~~~~~--~~~~-~~~--~~~~~~---~~~~~~~f~Rv~I~~---~~~p~~d~~~a~~~l~~aL~LR~k 266 (603)
.+.+.+.||++.+.... ++++ ++. ..++.. .......|||+.|+| +++|.+|+..+++.+.+|+.+|+|
T Consensus 83 ~~~~~~~~s~~~~~~~~d~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~tedl~~~~k~l~~~l~~r~k 162 (768)
T KOG1096|consen 83 EKDSLGPRSQSFSKSESDSEVQSYTLSDSKQGITLFTPRDQMGVRFQRVAITGEELEGVPTEDLADASKSLAKALFLREK 162 (768)
T ss_pred cCCCCCccccccccccCcccccccCccccccccccCCchhhhccchheeeccCcccCCCCHHHHHHHHhhhHHHHHHHHH
Confidence 34555667777665432 3332 111 112221 112348899999998 558999999999999999999999
Q ss_pred cCCCCCCCccccc--------------cc---CCCC--CC------CCCCCCCccC-CCCCCCceEEeeCcEEEEecCCC
Q 007460 267 YLFREAVAPWEKE--------------MI---SDPS--TP------KPNPDPFYYA-PVGKSDHHFEMQDGVIHVYPNKD 320 (603)
Q Consensus 267 Y~~~~~~~~~~~~--------------~~---~~~~--~p------~p~~~p~~~~-~~~~~~~~f~~~dGV~~v~~~~~ 320 (603)
||..+....++.. .. .++. +| .+..+|+... ++++.++.++|.+||.+|+.+++
T Consensus 163 y~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~l~m~~~v~~v~~~~~ 242 (768)
T KOG1096|consen 163 YMRISLQRFPDTTRNYLSGLAYPLPKYYYNESYDTKSHPPGKGNPPGEYFEPFDPEDPGEKLDYHLRMQDGVVHVYYDGK 242 (768)
T ss_pred HhhhhhhcCCcccccccCCCCCCCcccCcccccccccCCcccCCCCccccccccccccCcccceEEEecCCeeEeecCCc
Confidence 9964332222111 00 0111 12 1122345443 46778899999999999998776
Q ss_pred ----CCcccCCCCChHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhcCCCCCCcccceeecc
Q 007460 321 ----SKEELYPVADATTFFTDLHHILRVIALGNMRTLCHHRLLLLEQKFNLHLMLNADKEFLAQKSAPHRDFYNVRKVDT 396 (603)
Q Consensus 321 ----~~~~~~pip~~~eF~~D~~~l~~~i~~gp~ksfc~rRL~~Le~KF~Lh~lLN~~~E~~e~K~vphRDFYNvrKVDt 396 (603)
..+..+||||+++|+.|+++|+++|++||+|+||+|||+|||+||+||++||+++|+.++|++|||||||||||||
T Consensus 243 ~~~~~~~~~~~iPt~~ef~~D~~~ll~lI~dgp~ksf~~RRLqyLe~KF~l~~~LNe~~El~~~K~vPHRDFYNvRKVDt 322 (768)
T KOG1096|consen 243 EDSHAEEVLLPIPTLQEFRDDFEKLLALIADGPLKSFCHRRLQYLESKFQLHQLLNEKKELLAQKKVPHRDFYNVRKVDT 322 (768)
T ss_pred hhhhccCcCCCCCcHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCcccccccchhcc
Confidence 3456889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCHHHHHHHHHHHhccCCCceEEccCCccccHHHHHHhCCCCCCcccccccccccCCCccccccccccCCCCC
Q 007460 397 HVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPC 476 (603)
Q Consensus 397 hVH~SacMnqKhLL~FIk~Kl~~epd~vV~~~dGk~~TLkevFe~l~lt~~dLtVD~Ldvhad~~tFhRFD~Fn~KyNP~ 476 (603)
||||||||||||||||||+||++|||+||+.++|+.+||+|||+++|+++|||+||+|||||+++||||||+||+||||.
T Consensus 323 hih~SaCmnQkhLlrFIk~klr~epdrvV~~~~g~~lTLrevF~~l~L~~yDlsvd~ldvha~~~tfHrfdkfn~Kynp~ 402 (768)
T KOG1096|consen 323 HIHASACMNQKHLLRFIKKKLRKEPDRVVIQRDGRKLTLREVFKSLGLTAYDLSVDTLDVHADRNTFHRFDKFNAKYNPV 402 (768)
T ss_pred hhhHhhhcCHHHHHHHHHHHhhcCCceEEEecCCceeeHHHHHHHcCCceeccchhHHHhhhchhhhhccchhhhhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHhhcccCCCCchhHHHHHHHHHHHHhhhcccceeEEEEEEecCChhHHHHHHHHHHHCCCCCCCceEEEEeccc
Q 007460 477 GQSRLREIFLKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNELYSENVVWLIQVWIS 556 (603)
Q Consensus 477 G~s~LReiFLktDN~i~GrYlAEL~K~Vi~~LE~sKYQ~aE~RlSIYGrs~~EW~kLA~Wv~~~~L~S~nnRWlIQIPRl 556 (603)
|+++||+|||||||||+|+|||||+|+|+.+||+||||+||+||||||++++||++||+|+++|+++|+|+||+|||||+
T Consensus 403 g~s~LR~iFLktDNyI~GeYlAei~Kev~~dleeSKYQ~ae~rlsiygrs~~EW~klA~W~v~~~v~S~NvRWlIQipRi 482 (768)
T KOG1096|consen 403 GESRLREIFLKTDNYINGEYLAEILKEVLSDLEESKYQLAEPRLSIYGRSRDEWDKLASWLVDNKVFSPNVRWLIQIPRL 482 (768)
T ss_pred cHHHHHHHHHhhccccchhhHHHHHHHHHhhHHHhhhhhcceeEEEeeeCHHHHHHHHHHHHHccccCCCeeEEEecchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccccccccHHHHhhhccccccc-------cCchhhHHH-HHhh
Q 007460 557 MFLKSHHRCYEMLVMQNFSFWIKCNVCFPLL-------SHLYMHVCA-HVCA 600 (603)
Q Consensus 557 y~~~~~~~~~~~g~~~nF~~~l~~NIF~PLf-------~~~~~~~~~-~~~~ 600 (603)
|.+ ++++|.|+|||+||+ |||.||| +||.||+|- +||.
T Consensus 483 ydv-----y~~~g~v~nFqe~L~-nIF~PLFeat~~p~~hp~Lh~FL~~V~g 528 (768)
T KOG1096|consen 483 YDV-----YRKKGIVKNFQEMLD-NIFLPLFEATKDPSSHPELHVFLQQVSG 528 (768)
T ss_pred hHH-----HHhcCchhhHHHHHH-HHhhhhhhcccCCCcchHHHHHHHHhcC
Confidence 977 568999999999995 9999999 999999984 4543
No 4
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=100.00 E-value=6.8e-110 Score=911.67 Aligned_cols=342 Identities=51% Similarity=0.805 Sum_probs=306.2
Q ss_pred hhHHHHHHHHHHHHHhhhccCCCC------CCC---ccccc--------ccCCC-CCCCCCCCCCcc--C-CCCCCCceE
Q 007460 248 PDEMEAYVVLQECLEMRKRYLFRE------AVA---PWEKE--------MISDP-STPKPNPDPFYY--A-PVGKSDHHF 306 (603)
Q Consensus 248 ~d~~~a~~~l~~aL~LR~kY~~~~------~~~---~~~~~--------~~~~~-~~p~p~~~p~~~--~-~~~~~~~~f 306 (603)
+|++++++.|.+||.+|+|||... ++. .|... ..... ..|.+.++|+.. . |++++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (611)
T TIGR01429 1 EDLAEAAKSLAKALMLREKYARLAYHRFPDTTAQYLSHQGYPESVPLEEGLPDFHPPPDPQEDPYCLDDDAPPIELGYLV 80 (611)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCchhccCCCCCCCCCCccccccCcCCCCCCcCCCCcccCCCCCCCCCceE
Confidence 478999999999999999999432 111 12110 01111 122334566653 2 334789999
Q ss_pred EeeCcEEEEecCCCCC----cccCCCCChHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhcC
Q 007460 307 EMQDGVIHVYPNKDSK----EELYPVADATTFFTDLHHILRVIALGNMRTLCHHRLLLLEQKFNLHLMLNADKEFLAQKS 382 (603)
Q Consensus 307 ~~~dGV~~v~~~~~~~----~~~~pip~~~eF~~D~~~l~~~i~~gp~ksfc~rRL~~Le~KF~Lh~lLN~~~E~~e~K~ 382 (603)
+|++|||+||.+++.. ....|+|||++|+.|++.|+++|++||++|||++||+|||+||+||++||+++|..++|+
T Consensus 81 ~~~~gv~~v~~~~~~~~~~~~~~~~~~~~~~f~~D~~~l~~~~~~g~~~s~~~~RL~~Le~kf~L~~llN~~~E~~~~k~ 160 (611)
T TIGR01429 81 RMHGGVLFVYDNDTMLERQEPHFLVPPTLKTYYVDMEHLLALISDGPTKSFCFRRLQYLESKFNLHELLNEMSELKEQKS 160 (611)
T ss_pred EecCCEEEEEcCcchhhcCCccccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhcc
Confidence 9999999999876542 234566899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccceeeccccccccccCHHHHHHHHHHHhccCCCceEEccCCccccHHHHHHhCCCCCCcccccccccccCCCc
Q 007460 383 APHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKST 462 (603)
Q Consensus 383 vphRDFYNvrKVDthVH~SacMnqKhLL~FIk~Kl~~epd~vV~~~dGk~~TLkevFe~l~lt~~dLtVD~Ldvhad~~t 462 (603)
+|||||||||||||||||||||||||||||||+|++++||+||+.++|+.+||+|||+++|+++|+||||+|||||++++
T Consensus 161 ~p~rDFyn~rKVDthvh~s~cm~qk~LL~FIk~k~~~~pd~vV~~~~gk~~TL~evf~~l~l~~~dltvd~Ldv~a~~~~ 240 (611)
T TIGR01429 161 VPHRDFYNVRKVDTHIHAAASMNQKHLLRFIKHKLKTEPDETVIERDGKKLTLREVFDSLHLDPYDLSVDTLDVHADRNT 240 (611)
T ss_pred CCCCCceeeEEeeccccccccCCHHHHHHHHHHHHHcCCCcEEecCCCccccHHHHHHHcCCChhhCcHhhhCCcCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCchhHHHHhhcccCCCCchhHHHHHHHHHHHHhhhcccceeEEEEEEecCChhHHHHHHHHHHHCCC
Q 007460 463 FHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNEL 542 (603)
Q Consensus 463 FhRFD~Fn~KyNP~G~s~LReiFLktDN~i~GrYlAEL~K~Vi~~LE~sKYQ~aE~RlSIYGrs~~EW~kLA~Wv~~~~L 542 (603)
|||||+||+||||+|+++||+|||||||+|+|+|||||||+||+++|++|||+||+||||||++++||++||+|+++|+|
T Consensus 241 fhrfd~fn~kynp~G~s~Lr~iFLktdN~i~G~YfAelik~v~~~le~skyQ~~E~rlsiyG~~~~EW~kLA~W~~~~~l 320 (611)
T TIGR01429 241 FHRFDKFNLKYNPVGESRLREIFLKTDNYIGGKYFAELVKEVFTDLEDSKYQYAEPRLSIYGRSPKEWDSLARWIIDHDV 320 (611)
T ss_pred cccccccccccCccchHHHHHHHhccCCCcchhhHHHHHHHHHHHHHhcCceeEEEEEEEeCCCHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEeccchhhccccccccccccccHHHHhhhccccccc-------cCchhhHH
Q 007460 543 YSENVVWLIQVWISMFLKSHHRCYEMLVMQNFSFWIKCNVCFPLL-------SHLYMHVC 595 (603)
Q Consensus 543 ~S~nnRWlIQIPRly~~~~~~~~~~~g~~~nF~~~l~~NIF~PLf-------~~~~~~~~ 595 (603)
+|+||||+|||||+|.+ +++.|.|+||||||+ |||+||| +||.||+|
T Consensus 321 ~s~n~rW~IqiPRly~v-----~k~~g~v~~Fq~~L~-NIF~PLFeat~~P~~~p~L~~f 374 (611)
T TIGR01429 321 FSPNVRWLIQVPRLYDV-----YRSKKLVPNFGDMLE-NVFLPLFEVTKDPSSHPELHLF 374 (611)
T ss_pred CCCCccEEEEcchhHHH-----HhcCCCcCCHHHHHH-HHHHHHHHHhcCCccCHHHHHH
Confidence 99999999999999977 457899999999995 9999999 67777765
No 5
>PTZ00310 AMP deaminase; Provisional
Probab=100.00 E-value=2.5e-105 Score=923.79 Aligned_cols=356 Identities=32% Similarity=0.524 Sum_probs=314.0
Q ss_pred cCCcceeeeCCCCCCChhHHHHHHHHHHHHHhhhccCCCCCCCcccccccCCCCCCCCCCCCCccCCCCCCCceEEeeCc
Q 007460 232 QETFARLQITPKEVPSPDEMEAYVVLQECLEMRKRYLFREAVAPWEKEMISDPSTPKPNPDPFYYAPVGKSDHHFEMQDG 311 (603)
Q Consensus 232 ~~~f~Rv~I~~~~~p~~d~~~a~~~l~~aL~LR~kY~~~~~~~~~~~~~~~~~~~p~p~~~p~~~~~~~~~~~~f~~~dG 311 (603)
...|+|+.++|..- ..+..+|++.|.+||.+|+||++.. ..+|+......+..... -.........|.|+|.||
T Consensus 689 ~~~fPR~I~~gp~~-~~~~~~~~~~l~~~~~lr~~y~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~dg 762 (1453)
T PTZ00310 689 RVRFPRTVLYGPHK-SGKAVTAAPALARALDLRHKYIWNP-PPPWETTQRNVVEEDFQ----RTTRQFNEDQWTYAAYDG 762 (1453)
T ss_pred cccCceEEecCCcc-cchHHHHHHHHHHHHHHHHHhhcCC-CCccccccccccccccc----cccCCCCCCceeEeccCc
Confidence 45699998887521 2457899999999999999999763 35666431111000000 000111234567999999
Q ss_pred EEEEecCCCCCcccCCCCChHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhccchhh--hhhcCCCCCCcc
Q 007460 312 VIHVYPNKDSKEELYPVADATTFFTDLHHILRVIALGNMRTLCHHRLLLLEQKFNLHLMLNADKEF--LAQKSAPHRDFY 389 (603)
Q Consensus 312 V~~v~~~~~~~~~~~pip~~~eF~~D~~~l~~~i~~gp~ksfc~rRL~~Le~KF~Lh~lLN~~~E~--~e~K~vphRDFY 389 (603)
||.|+..+........+||+++|+.|++.|++++++||+|+||++||+|||+||+||++||+..|. .++|.+||||||
T Consensus 763 v~~~~~~~~~~~~~~~~p~~~~f~~D~~~l~~~~~~~~~ksf~~~RL~~Le~kf~Lh~~lN~~~E~~~~~~k~~~~rDFY 842 (1453)
T PTZ00310 763 VFILSPKGAVHAWPRFLPTLTEFIRDLSELRDICSSVEVKRLATKRLENLEHKFRLHLALNHSNEAGTTEERESSNRDFY 842 (1453)
T ss_pred EEEEeeCCcccccccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhcchhhhhhHHhhcCCCCCce
Confidence 999997664333333589999999999999999999999999999999999999999999999995 799999999999
Q ss_pred cceeeccccccccccCHHHHHHHHHHHhccCCCceEEccCCccccHHHHHHhCCCCCCcccccccccccCCCcccccccc
Q 007460 390 NVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKF 469 (603)
Q Consensus 390 NvrKVDthVH~SacMnqKhLL~FIk~Kl~~epd~vV~~~dGk~~TLkevFe~l~lt~~dLtVD~Ldvhad~~tFhRFD~F 469 (603)
|||||||||||||||||||||+|||+|++++||+||+.++|+++||+|||+++|+|+| ||||+||||||++||||||+|
T Consensus 843 n~rKVDthih~sacm~qk~LL~FIk~kl~~~~d~vV~~~~g~~~TL~evF~~l~~t~~-lsvd~L~v~ad~~~f~rfD~f 921 (1453)
T PTZ00310 843 QAYKVDTHIHMAAGMTARQLLEFVVDKLLESGDDIAFKRGDHIVTLGQLFSKYGITPN-LTVDQLNVQADHTLFERFDNF 921 (1453)
T ss_pred eeeeeccccchhccCCHHHHHHHHHHHHhcCCCcEEEcCCCccccHHHHHHHcCCCcc-cchhhhccccCcchhhhhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred ccCCCCCchhHHHHhhcccCCCCchhHHHHHHHHHHHHhhhcccceeEEEEEEecCChhHHHHHHHHHHHCCCCCCCceE
Q 007460 470 NLKYNPCGQSRLREIFLKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNELYSENVVW 549 (603)
Q Consensus 470 n~KyNP~G~s~LReiFLktDN~i~GrYlAEL~K~Vi~~LE~sKYQ~aE~RlSIYGrs~~EW~kLA~Wv~~~~L~S~nnRW 549 (603)
|.||||+|+++||+|||||||+|+|||||||||+||++||++|||+|||||||||++++||++||+|+++|||+|+||||
T Consensus 922 n~kynP~g~s~LreiFLktDN~i~G~YfAel~K~v~~~le~skyq~aE~RlSIYG~~~~EW~kLA~W~~~~~l~S~nvrW 1001 (1453)
T PTZ00310 922 NSKYNPMENPDLRSLLLKTDNFMKGRYFAELIKDVFEQYSRDRFTYAENRLSIYGINVKEWDDLAHWFDTHGMASKHNKW 1001 (1453)
T ss_pred cccCCCcccHHHHHHHccCCCCcccHhHHHHHHHHHHHHHhccceeeeeeEeeeCCCHHHHHHHHHHHHHcCCCCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccchhhccccccccccccccHHHHhhhccccccc-------cCchhhHHH-HHhh
Q 007460 550 LIQVWISMFLKSHHRCYEMLVMQNFSFWIKCNVCFPLL-------SHLYMHVCA-HVCA 600 (603)
Q Consensus 550 lIQIPRly~~~~~~~~~~~g~~~nF~~~l~~NIF~PLf-------~~~~~~~~~-~~~~ 600 (603)
+|||||+|.+ +++.|.|+||||||+ |||.||| +||+||.|- +|++
T Consensus 1002 ~IQiPRlY~~-----~k~~g~v~~F~~~L~-nIF~PLFeat~~P~~hp~L~~FL~~v~g 1054 (1453)
T PTZ00310 1002 MIQVPRVYKV-----FRAQNVIGSFGQYLD-NIFQPLWEASLHPSKHPKFHYFLNHVSG 1054 (1453)
T ss_pred EEecchhhHH-----HHhcCCcCCHHHHHH-HHHHHhHhhhcCcccChHHHHHHHHhCc
Confidence 9999999976 558899999999995 9999999 789999874 4443
No 6
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=100.00 E-value=4.5e-99 Score=813.59 Aligned_cols=256 Identities=65% Similarity=1.053 Sum_probs=249.9
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhcCCCCCCcccceeeccccccccccCHHHHHHHH
Q 007460 334 FFTDLHHILRVIALGNMRTLCHHRLLLLEQKFNLHLMLNADKEFLAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFI 413 (603)
Q Consensus 334 F~~D~~~l~~~i~~gp~ksfc~rRL~~Le~KF~Lh~lLN~~~E~~e~K~vphRDFYNvrKVDthVH~SacMnqKhLL~FI 413 (603)
|+.|++.|+++|++||++|||++||+|||+||+||++||+++|..++|++||||||||||||||||||||||||||||||
T Consensus 1 ~~~D~~~l~~~~~~~~~~s~~~~RL~~L~~kf~l~~~lN~~~E~~~~k~~~~rdfyn~~KVD~~vh~s~cm~~k~Ll~FI 80 (496)
T cd01319 1 FYLDLEFLLALISDGPAKSFCYRRLQYLESKFQLHVLLNEDRELKEQKTVPHRDFYNVRKVDTHVHHSACMNQKHLLRFI 80 (496)
T ss_pred ChhHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccCCCCCceeCceecccccccccCCHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCceEEccCCccccHHHHHHhCCCCCCcccccccccccCCCccccccccccCCCCCchhHHHHhhcccCCCCc
Q 007460 414 KSKLRKEPDEVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQ 493 (603)
Q Consensus 414 k~Kl~~epd~vV~~~dGk~~TLkevFe~l~lt~~dLtVD~Ldvhad~~tFhRFD~Fn~KyNP~G~s~LReiFLktDN~i~ 493 (603)
|+|++++||+||+.++|+++||+|||+++|+++|+||||+|||||++++|||||+||+||||+|+++||+|||||||+|+
T Consensus 81 ~~k~~~~pd~vv~~~~g~~~TL~e~f~~l~~~~~~ltvd~L~~~a~~~~~~rfd~fn~kynp~g~~~Lr~iFLktdn~~~ 160 (496)
T cd01319 81 KKKLRTEPDEVVIFRDGKKLTLKEVFDSLKLTAYDLSVDTLDVHADRNTFHRFDKFNLKYNPIGESRLREIFLKTDNYIN 160 (496)
T ss_pred HHHHHcCCCcEEECCCCccccHHHHHHHcCCChhhCchhhcCcCCCCCccccccccccccCccchHHHHHHHhccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhcccceeEEEEEEecCChhHHHHHHHHHHHCCCCCCCceEEEEeccchhhcccccccccccccc
Q 007460 494 GRFLAELTKQVFSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNELYSENVVWLIQVWISMFLKSHHRCYEMLVMQN 573 (603)
Q Consensus 494 GrYlAEL~K~Vi~~LE~sKYQ~aE~RlSIYGrs~~EW~kLA~Wv~~~~L~S~nnRWlIQIPRly~~~~~~~~~~~g~~~n 573 (603)
|+|||||||+||+++|++|||+||+||||||++++||++||+|+++|||+|+||||+|||||+|.+ +++.|.|+|
T Consensus 161 G~y~Ael~k~v~~~le~~kyq~~E~rlsiyG~~~~Ew~~lA~W~~~~~l~s~n~rW~iqipR~y~~-----~~~~g~~~~ 235 (496)
T cd01319 161 GRYLAEITKEVFSDLEESKYQHAEYRLSIYGRSKDEWDKLASWVVDNDLFSPNVRWLIQIPRLYDV-----YKKSGIVNS 235 (496)
T ss_pred hHhHHHHHHHHHHHHHhccceeEEEEEEEeCCCHHHHHHHHHHHHHcCCCCCCceEEEecchhHHH-----HhhcCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999977 457899999
Q ss_pred HHHHhhhccccccc-------cCchhhHH
Q 007460 574 FSFWIKCNVCFPLL-------SHLYMHVC 595 (603)
Q Consensus 574 F~~~l~~NIF~PLf-------~~~~~~~~ 595 (603)
|||||+ |||.||| +||.||.|
T Consensus 236 Fq~~L~-nIF~PLfeat~~P~~~p~l~~f 263 (496)
T cd01319 236 FQEMLE-NIFEPLFEATKDPSSHPELHVF 263 (496)
T ss_pred HHHHHH-HHHHHHHHHhcCcccCHHHHHH
Confidence 999995 9999999 66777765
No 7
>PTZ00310 AMP deaminase; Provisional
Probab=100.00 E-value=6.5e-93 Score=820.87 Aligned_cols=343 Identities=22% Similarity=0.332 Sum_probs=302.4
Q ss_pred cCcccCCcceeeeCCCCCCChhHHHHHHHHHHHHHhhhccCCCCCCCcccccccCCCCCCCCCCCCCccCCCCCCCceEE
Q 007460 228 KEPEQETFARLQITPKEVPSPDEMEAYVVLQECLEMRKRYLFREAVAPWEKEMISDPSTPKPNPDPFYYAPVGKSDHHFE 307 (603)
Q Consensus 228 ~~~~~~~f~Rv~I~~~~~p~~d~~~a~~~l~~aL~LR~kY~~~~~~~~~~~~~~~~~~~p~p~~~p~~~~~~~~~~~~f~ 307 (603)
...+.++|.+|.|+|+++ ..|+.+|+++|..||.+|++|+..++... +. +...|.. .++.++.++|+
T Consensus 58 ~~~~~~~~~~v~idgddg-~~~~~~~~~~l~~ai~~r~~yk~~d~g~~-~g----------~~~~~~~-~~~~~~~~~~~ 124 (1453)
T PTZ00310 58 LAAVASTMFRVVIDGDDG-GVDMRKVHGRIAAAIRVRQLYKPTDTKVP-EG----------EREQPSD-STPMPSLVTIV 124 (1453)
T ss_pred hhccccceEEEEecCCCc-chHHHHHHHHHHHHHHHHHhhhccCCCcC-cC----------CccCccc-cCCCCCceEEE
Confidence 344678899999999776 46999999999999999999997654321 11 0111111 12245678899
Q ss_pred eeCcEEEEecCCCCCcccCCCCChHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhccchhhhhhcCCCCCC
Q 007460 308 MQDGVIHVYPNKDSKEELYPVADATTFFTDLHHILRVIALGNMRTLCHHRLLLLEQKFNLHLMLNADKEFLAQKSAPHRD 387 (603)
Q Consensus 308 ~~dGV~~v~~~~~~~~~~~pip~~~eF~~D~~~l~~~i~~gp~ksfc~rRL~~Le~KF~Lh~lLN~~~E~~e~K~vphRD 387 (603)
|+||||+|++.+ ....+| |+|++|+.|++.|+++|++|+|+|||++||+|||+||+||++||+++|..+++..+|||
T Consensus 125 ~~~GV~~v~~~~--~~~~~~-p~~~~F~~D~~~l~~~v~~g~~ks~c~~RL~~Le~Kf~L~~llN~~~E~~~~~~~~~~d 201 (1453)
T PTZ00310 125 QRDGVYRFSGMD--TSVVLP-PPWEQYVRDVQAVYLTVGNGPCLSACRHRLTIIQERSRMFFLLNAEIEERADLYKAGGV 201 (1453)
T ss_pred EeCCEEEeecCC--cccccC-CCHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHchhhhhhcCcCCCCCc
Confidence 999999998553 334456 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeeccccccccccCHHHHHHHHHHHhccCCCceEEccCCccccHHHHHHhCCCC-CCccccccccccc--CCCccc
Q 007460 388 FYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLT-GYDLNVDLLDVHA--DKSTFH 464 (603)
Q Consensus 388 FYNvrKVDthVH~SacMnqKhLL~FIk~Kl~~epd~vV~~~dGk~~TLkevFe~l~lt-~~dLtVD~Ldvha--d~~tFh 464 (603)
|||||||||||||||||||||||||||+|++++||+||+.++|+.+||+|||+++|++ +|+||||+||||| +++|||
T Consensus 202 Fyn~rKVDthvh~sacMnqk~LLrFIk~kl~~epd~vV~~~~Gk~~TL~evFesl~lt~~~dLTVd~Ldvha~~drntfh 281 (1453)
T PTZ00310 202 FSPCTKVDNAVLLSTSVDAQELLEFVVTTYREQPRAPLRLRDGSNSTLREYLEAHGVRDPRELTVEGLGWQPTKYRNKYG 281 (1453)
T ss_pred eeecceeecccchhccCCHHHHHHHHHHHHhcCCCcEEEcCCCccccHHHHHHhcCCCCccccchhhcCCcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999996 8999999999999 789999
Q ss_pred cccccccCCCCCch--hHHHHhhcccCCCCchhHHHHHHHHHHHHhhhcccc--eeEEEEEEecCChhHHHHHHHHHHHC
Q 007460 465 RFDKFNLKYNPCGQ--SRLREIFLKQDNLIQGRFLAELTKQVFSDLEASKYQ--MAEYRISIYGRKQSEWDQLASWIVNN 540 (603)
Q Consensus 465 RFD~Fn~KyNP~G~--s~LReiFLktDN~i~GrYlAEL~K~Vi~~LE~sKYQ--~aE~RlSIYGrs~~EW~kLA~Wv~~~ 540 (603)
|||+||.| ||+|+ ++||+||||| +|+|||+|||+||+++|++||| ++||||||||++++||++||+|+++|
T Consensus 282 rFDkFn~K-NP~G~~~s~LReiFLkT----~G~y~a~liK~vi~~lE~sKyQ~q~~E~rlSIYGr~~~EW~kLA~Wvv~~ 356 (1453)
T PTZ00310 282 QYDLFDAK-NPMGALGAELRQSFLSL----HGNLCGKLLRRELERREYQKQQPQATEYSLPLYGHHPEELTDLAEWVRRQ 356 (1453)
T ss_pred cccccccc-CCCccchhHHHHHHHhc----CcHHHHHHHHHHHHHHHhccccceeeEEEEEEeCCChhHHHHHHHHHHHC
Confidence 99999999 99999 9999999999 6999999999999999999997 69999999999999999999999999
Q ss_pred CCCC-CCceEEEEeccchhhccccccccccccccHHHHhhhccccccc-------c--CchhhHHH
Q 007460 541 ELYS-ENVVWLIQVWISMFLKSHHRCYEMLVMQNFSFWIKCNVCFPLL-------S--HLYMHVCA 596 (603)
Q Consensus 541 ~L~S-~nnRWlIQIPRly~~~~~~~~~~~g~~~nF~~~l~~NIF~PLf-------~--~~~~~~~~ 596 (603)
+|+| +||||+||| +|. ....++..+.|+||||||+ |||.||| + ||.||.|-
T Consensus 357 ~l~s~~nvRWlIQI--vyk--~~~~~~~~~~v~nFqd~Ld-NIF~PLFeaTl~P~~~~~p~L~~FL 417 (1453)
T PTZ00310 357 GFGPFSRNRWILAI--SFK--ELGPFQVPSSCTTVQDQLD-NIFLPLFKATLCPSDPQWSDVAWLL 417 (1453)
T ss_pred CCCccCCceEEEEE--EEe--ccccccccccccCHHHHHH-HHHHHHHHHhcCcCcCCCHHHHHHH
Confidence 9996 799999999 442 1122445678999999995 9999999 2 67788763
No 8
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=98.58 E-value=4.4e-09 Score=111.30 Aligned_cols=132 Identities=14% Similarity=-0.000 Sum_probs=111.1
Q ss_pred ccccccccccCCCccccccccccCCCCCchhHHHHhhcccCCCCchhHHHHHHHHHHHHhhhcccceeEEEEEEecCChh
Q 007460 449 LNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISIYGRKQS 528 (603)
Q Consensus 449 LtVD~Ldvhad~~tFhRFD~Fn~KyNP~G~s~LReiFLktDN~i~GrYlAEL~K~Vi~~LE~sKYQ~aE~RlSIYGrs~~ 528 (603)
+.++.+++++.+..+|++...+.+++++++...|..+.++.+...+.+++++.++......-.+|+...+++..+.++.+
T Consensus 2 ~~~~~~~~~~pkaelH~HL~g~l~p~~v~~la~r~gi~~~~~~~~~~~~~~~~~~~~~~~~l~~fl~~~y~~~~v~~~~~ 81 (345)
T COG1816 2 MDILELIRHLPKAELHRHLEGSLRPELVLELARRYGIALPPAEFDETILEELRAEYNKFNDLQEFLEKYYRGASVLRTEE 81 (345)
T ss_pred cchHHHHhhchhhHhhhcccCCcCHHHHHHHHHHhCccCCcccccchhHHHHHHHHhccccHHHHHHHHHHHHHhhccHH
Confidence 45677889999999999999999999999888888888888888888888887665534444456666666677778999
Q ss_pred HHHHHHHHHHHCCCCCCCceEEEEeccchhhccccccccccccccHHHHhhhccccccc
Q 007460 529 EWDQLASWIVNNELYSENVVWLIQVWISMFLKSHHRCYEMLVMQNFSFWIKCNVCFPLL 587 (603)
Q Consensus 529 EW~kLA~Wv~~~~L~S~nnRWlIQIPRly~~~~~~~~~~~g~~~nF~~~l~~NIF~PLf 587 (603)
+|.+||.|++++...+.+++|.||++| |.. ..+.+.+++|++.+. ++|.|+-
T Consensus 82 ~~~~la~~~~~~~~~~~~vy~Ei~f~p-~~~-----t~~~l~~~~~~e~~~-~~~~~~~ 133 (345)
T COG1816 82 DFYRLAYEYLEDAAADNVVYAEIRFDP-YLH-----TKRGLSVDTVVEGLI-AGFRPAE 133 (345)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEeCc-chh-----hhccCCHHHHHHHHH-HHHHHHh
Confidence 999999999999999999999999999 743 457789999999995 8999997
No 9
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=98.19 E-value=7e-07 Score=92.02 Aligned_cols=102 Identities=26% Similarity=0.290 Sum_probs=77.1
Q ss_pred eeeccccccccccCHHHHHHHHHHHhccCCCceEEccCCccccHHHHHHhCCCCCCcccccccccccCCCcccccccccc
Q 007460 392 RKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNL 471 (603)
Q Consensus 392 rKVDthVH~SacMnqKhLL~FIk~Kl~~epd~vV~~~dGk~~TLkevFe~l~lt~~dLtVD~Ldvhad~~tFhRFD~Fn~ 471 (603)
.|||.|+|+.|||.+..|++++++
T Consensus 2 PK~eLH~Hl~Gsi~~~~l~~l~~~-------------------------------------------------------- 25 (305)
T cd00443 2 PKVELHAHLSGSISPETLLELIKK-------------------------------------------------------- 25 (305)
T ss_pred CceeEEecCcCCCCHHHHHHHHHH--------------------------------------------------------
Confidence 599999999999999999999999
Q ss_pred CCCCCchhHHHHhhcccCCC-CchhHHHHHHHHHHHHhhhcccceeEEEEEEecCChh-HHHHHHHHHHHCCCCC-----
Q 007460 472 KYNPCGQSRLREIFLKQDNL-IQGRFLAELTKQVFSDLEASKYQMAEYRISIYGRKQS-EWDQLASWIVNNELYS----- 544 (603)
Q Consensus 472 KyNP~G~s~LReiFLktDN~-i~GrYlAEL~K~Vi~~LE~sKYQ~aE~RlSIYGrs~~-EW~kLA~Wv~~~~L~S----- 544 (603)
+..++|..+.+. ..+++|+++++++++++.+++++++|+|++.++.... .|....-|-.-+..+.
T Consensus 26 --------~f~~~f~~~~~~l~~~~~l~~~~~~~~~~~~~d~V~Y~E~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (305)
T cd00443 26 --------EFFEKFLLVHNLLQKGEALARALKEVIEEFAEDNVQYLELRTTPRLLETEKGLTKEQYWLLVIEGISEAKQW 97 (305)
T ss_pred --------HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEcchhhcCcccCCCHHHHHHHHHHHHHHHHHH
Confidence 566777777777 6889999999999999999999999999999875443 4444333322222222
Q ss_pred ---CCceEEEEeccch
Q 007460 545 ---ENVVWLIQVWISM 557 (603)
Q Consensus 545 ---~nnRWlIQIPRly 557 (603)
-.++|++.+-|-.
T Consensus 98 ~~~I~~~lI~~~~R~~ 113 (305)
T cd00443 98 FPPIKVRLILSVDRRG 113 (305)
T ss_pred cCCeeEeEEEEEeCCC
Confidence 2555666655543
No 10
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=96.73 E-value=0.00012 Score=75.16 Aligned_cols=128 Identities=18% Similarity=0.130 Sum_probs=74.4
Q ss_pred cceeeccccccccccCHHHHHHHHHHHhccCCCceEEccCC-------ccccHHHHHHhCCCCCCcccccccccccCCCc
Q 007460 390 NVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDG-------TYLTLKEVFESLDLTGYDLNVDLLDVHADKST 462 (603)
Q Consensus 390 NvrKVDthVH~SacMnqKhLL~FIk~Kl~~epd~vV~~~dG-------k~~TLkevFe~l~lt~~dLtVD~Ldvhad~~t 462 (603)
|..|||.|+|++|||+...|+++++++...++...+....+ ..-+|.+.++.+
T Consensus 1 m~pK~eLH~HL~Gsi~~~~l~ela~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------------------- 60 (331)
T PF00962_consen 1 MLPKAELHIHLDGSISPETLLELAKKNNICELPADTDEELEKHLTRPENFRSLNEFLELF-------------------- 60 (331)
T ss_dssp TS-EEEEEEEGGGSS-HHHHHHHHHHCTCC-TTSCSSHHHHHHHHCTSSCSSHHHHHHHH--------------------
T ss_pred CCCEEEeeeCCccCCCHHHHHHHHHhCCCCccccccchhhhhHHhhhhhcccHHHHHHHH--------------------
Confidence 67899999999999999999999999887644332221111 111222222111
Q ss_pred cccccccccCCCCCchhHHHHhhcccCCCCchhHHHHHHHHHHHHhhhcccceeEEEEEEe---cCC-----hhHHHHHH
Q 007460 463 FHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISIY---GRK-----QSEWDQLA 534 (603)
Q Consensus 463 FhRFD~Fn~KyNP~G~s~LReiFLktDN~i~GrYlAEL~K~Vi~~LE~sKYQ~aE~RlSIY---Grs-----~~EW~kLA 534 (603)
....-++..+ ..=+=+..++.+++++.-+...+++|+|++.. -.. ..-.+.+.
T Consensus 61 -----------------~~~~~~~~~~--~~~e~~~~~~~~~l~~~~~dnV~YlElr~~P~~~~~~~~~~~~~~~~~~i~ 121 (331)
T PF00962_consen 61 -----------------DIISSVLQAD--RTPEDLRRYAYEVLEDFAEDNVVYLELRFSPQFHAQLGGNLSFDEVVEAII 121 (331)
T ss_dssp -----------------HHHHHHHTCS--TSHHHHHHHHHHHHHHHHHTTEEEEEEEESHHHHHTTTCSSTHHHHHHHHH
T ss_pred -----------------HHhhhhhhhc--ccHHHHHHHHHHHHHHHHHcCCeEEEEEeccccccccCCCCCHHHHHHHHH
Confidence 1111111111 13445667788888999999999999999532 222 23344555
Q ss_pred HHHHHCCCCC-CCceEEEEeccc
Q 007460 535 SWIVNNELYS-ENVVWLIQVWIS 556 (603)
Q Consensus 535 ~Wv~~~~L~S-~nnRWlIQIPRl 556 (603)
..+.+..=-+ -.++|++.+-|.
T Consensus 122 ~~~~~a~~~~~i~~~li~~~~R~ 144 (331)
T PF00962_consen 122 EGIDRAEKEFGIKVRLIISVLRH 144 (331)
T ss_dssp HHHHHHHHHHTTEEEEEEEEETT
T ss_pred hhhhhcccccccccccccccccc
Confidence 5555421112 578999999886
No 11
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=85.65 E-value=4.4 Score=43.50 Aligned_cols=62 Identities=13% Similarity=0.127 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHhhhcccceeEEEEEE---ec-----CChhHHH-HH----HHHHHHCCCCCCCceEEEEeccch
Q 007460 495 RFLAELTKQVFSDLEASKYQMAEYRISI---YG-----RKQSEWD-QL----ASWIVNNELYSENVVWLIQVWISM 557 (603)
Q Consensus 495 rYlAEL~K~Vi~~LE~sKYQ~aE~RlSI---YG-----rs~~EW~-kL----A~Wv~~~~L~S~nnRWlIQIPRly 557 (603)
+=|.+++++++.++.+....++|+|++. |. .+.+++- -+ +.+-..+.- --.+||++.+-|-+
T Consensus 66 ~~~~~~~~~~~~d~~~dgV~Y~Eir~~P~~~~~~~~~g~~~~~v~~av~~~~~~~~~~~~~-~i~v~lI~~~~R~~ 140 (345)
T cd01321 66 PIFRDYYRRLLEELYEDNVQYVELRSSFSPLYDLDGREYDYEETVQLLEEVVEKFKKTHPD-FIGLKIIYATLRNF 140 (345)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeecchHHHHccCCCCCHHHHHHHHHHHHHHHHHhCCC-CceEEEEEEecCCC
Confidence 3467889999999999999999999976 32 3455552 22 223233311 13688999999965
No 12
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=70.45 E-value=3.8 Score=42.39 Aligned_cols=53 Identities=17% Similarity=0.310 Sum_probs=35.4
Q ss_pred cceeeccccccccccCHHHHHHHHHHHhccCCCceE----Ec-cCCccccHHHHHHhC
Q 007460 390 NVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVV----IF-RDGTYLTLKEVFESL 442 (603)
Q Consensus 390 NvrKVDthVH~SacMnqKhLL~FIk~Kl~~epd~vV----~~-~dGk~~TLkevFe~l 442 (603)
|.-|||.|+|+.||+....|.++.+++=...|.... .. .-+...+|.+.|+.+
T Consensus 1 ~lpK~elH~Hl~Gs~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 58 (325)
T cd01320 1 NLPKAELHLHLDGSLRPETILELAKKNGITLPASDVELLELVVAAYNFSDLQDFLAKY 58 (325)
T ss_pred CCCceEEeecccCCCCHHHHHHHHHHhCCCCCCCCHHHHHHHhccccCCCHHHHHHHH
Confidence 567999999999999999999988876333332111 01 113345777777654
No 13
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=62.57 E-value=5 Score=41.74 Aligned_cols=25 Identities=20% Similarity=0.428 Sum_probs=22.2
Q ss_pred eeeccccccccccCHHHHHHHHHHH
Q 007460 392 RKVDTHVHHSACMNQKHLLRFIKSK 416 (603)
Q Consensus 392 rKVDthVH~SacMnqKhLL~FIk~K 416 (603)
-|||.|+|+.||.....|.+..++.
T Consensus 2 pK~eLH~Hl~Gsi~~~~l~~l~~~~ 26 (324)
T TIGR01430 2 PKAELHLHLEGSIRPETLLELAQKN 26 (324)
T ss_pred CceeeEecccCCCCHHHHHHHHHHc
Confidence 4999999999999999999977654
No 14
>PTZ00124 adenosine deaminase; Provisional
Probab=61.52 E-value=23 Score=38.53 Aligned_cols=129 Identities=19% Similarity=0.220 Sum_probs=71.7
Q ss_pred ceeeccccccccccCHHHHHHHHHHHhccCCCceEEccCCccccHHHHHHhCCCCCCcccccccccccCCCccccccccc
Q 007460 391 VRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFN 470 (603)
Q Consensus 391 vrKVDthVH~SacMnqKhLL~FIk~Kl~~epd~vV~~~dGk~~TLkevFe~l~lt~~dLtVD~Ldvhad~~tFhRFD~Fn 470 (603)
.-||+-|+|+.||+....|++..++. ...+ +.|+.++.+..... +. -.+|+ ..| +.|.
T Consensus 35 lPKvELH~HLdGsi~~~tl~~La~~~-~~~~----------~~~~~~l~~~~~~~-~~--~~~L~-----~fl---~~f~ 92 (362)
T PTZ00124 35 IPKCELHCHLDLCFSVDFFLSCIRKY-NLQP----------NLSDEEILDYYLFA-KG--GKSLG-----EFV---EKAI 92 (362)
T ss_pred CCceeEeecccCCCCHHHHHHHHHHc-CCCC----------CCCHHHHHHHHhcc-cC--CCCHH-----HHH---HHHH
Confidence 56999999999999999998888532 2221 12566665432111 00 00110 011 1111
Q ss_pred cCCCCCchhHHHHhhcccCCCCchhHHHHHHHHHHHHhhhcccceeEEEEEE-ec---CChhHHHHHHHHHHH------C
Q 007460 471 LKYNPCGQSRLREIFLKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISI-YG---RKQSEWDQLASWIVN------N 540 (603)
Q Consensus 471 ~KyNP~G~s~LReiFLktDN~i~GrYlAEL~K~Vi~~LE~sKYQ~aE~RlSI-YG---rs~~EW~kLA~Wv~~------~ 540 (603)
....++ ..-+=|.+++.+++.++......++|+|++- +. +..+ |+..-..+++ .
T Consensus 93 ---------~~~~vl------~t~~dl~r~a~e~~~d~~~dgV~Y~Eir~~P~~~~~~~gl~-~~~vv~av~~g~~~a~~ 156 (362)
T PTZ00124 93 ---------RVADIF------NDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKHNLD-IDLIHQAIVKGIKEAVE 156 (362)
T ss_pred ---------HHHHHh------CCHHHHHHHHHHHHHHHHHcCCEEEEEEcCchhhhcCCCCC-HHHHHHHHHHHHHHHHh
Confidence 111222 1224477889999999999999999999965 32 1111 3333333321 1
Q ss_pred CC-CCCCceEEEEeccch
Q 007460 541 EL-YSENVVWLIQVWISM 557 (603)
Q Consensus 541 ~L-~S~nnRWlIQIPRly 557 (603)
.. +--.++|++.+-|-.
T Consensus 157 ~~~~gI~~~lI~~~~R~~ 174 (362)
T PTZ00124 157 LLDHKIEVGLLCIGDTGH 174 (362)
T ss_pred ccCCCceEeEEEEecCCC
Confidence 10 223689999998853
No 15
>PF01726 LexA_DNA_bind: LexA DNA binding domain; InterPro: IPR006199 This is the DNA binding domain of the LexA SOS regulon repressor which prevents expression of DNA repair proteins in bacteria. The aligned region contains a variant form of the helix-turn-helix DNA binding motif []. This domain usually at the N terminus is found associated with IPR006198 from INTERPRO the auto-proteolytic domain of LexA 3.4.21.88 from EC.; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1LEA_A 1JHH_A 3JSP_A 1JHF_A 3JSO_B 1LEB_A 3K2Z_A.
Probab=57.03 E-value=8.9 Score=32.05 Aligned_cols=31 Identities=35% Similarity=0.573 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhccCCCceEEccCCccccHHHHHHhCCCC
Q 007460 406 QKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLT 445 (603)
Q Consensus 406 qKhLL~FIk~Kl~~epd~vV~~~dGk~~TLkevFe~l~lt 445 (603)
|++.|+||++-+.++ |-..|.+||.+.+|+.
T Consensus 8 Q~~vL~~I~~~~~~~---------G~~Pt~rEIa~~~g~~ 38 (65)
T PF01726_consen 8 QKEVLEFIREYIEEN---------GYPPTVREIAEALGLK 38 (65)
T ss_dssp HHHHHHHHHHHHHHH---------SS---HHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHc---------CCCCCHHHHHHHhCCC
Confidence 789999999987754 7788999999999986
No 16
>PF05871 ESCRT-II: ESCRT-II complex subunit; InterPro: IPR008570 This entry represents the vps25 subunit (vacuolar protein sorting-associated protein 25) of the endosome-associated complex ESCRT-II (Endosomal Sorting Complexes Required for Transport protein II). ESCRT (ESCRT-I, -II, -III) complexes orchestrate efficient sorting of ubiquitinated transmembrane receptors to lysosomes via multivesicular bodies (MVBs) []. ESCRT-II recruits the transport machinery for protein sorting at MVB []. In addition, the human ESCRT-II has been shown to form a complex with RNA polymerase II elongation factor ELL in order to exert transcriptional control activity. ESCRT-II transiently associates with the endosomal membrane and thereby initiates the formation of ESCRT-III, a membrane-associated protein complex that functions immediately downstream of ESCRT-II during sorting of MVB cargo. ESCRT-II in turn functions downstream of ESCRT-I, a protein complex that binds to ubiquitinated endosomal cargo []. ESCRT-II is a trilobal complex composed of two copies of vps25, one copy of vps22 and the C-terminal region of vps36. The crystal structure of vps25 revealed two winged-helix domains, the N-terminal domain of vps25 interacting with vps22 and vps35 [].; PDB: 1W7P_B 1U5T_D 1XB4_D 3HTU_E 3CUQ_C 2ZME_D.
Probab=51.76 E-value=32 Score=32.97 Aligned_cols=50 Identities=26% Similarity=0.555 Sum_probs=36.2
Q ss_pred CchhHHHHHHHHHHHHhhhcccceeEE------EEEEecCChhHHHH-HHHHHHHCCCC
Q 007460 492 IQGRFLAELTKQVFSDLEASKYQMAEY------RISIYGRKQSEWDQ-LASWIVNNELY 543 (603)
Q Consensus 492 i~GrYlAEL~K~Vi~~LE~sKYQ~aE~------RlSIYGrs~~EW~k-LA~Wv~~~~L~ 543 (603)
|+=+.=.|.+++|++.|.+.+ .||| ++-||=++++||.. |-+|+.++|+.
T Consensus 57 I~R~L~~e~~~~Il~~Lv~~g--~aew~~~~~~~~~I~Wrt~~eWa~~I~~Wv~~~G~~ 113 (139)
T PF05871_consen 57 INRRLSPEFIREILDELVQKG--NAEWIDKSKTRCLIYWRTPEEWADLIYDWVESTGQL 113 (139)
T ss_dssp TTEE--HHHHHHHHHHHHCTT--SEEECSTTSCEEEE-SS-HHHHHHHHHHHHHCCTTT
T ss_pred ccCCCCHHHHHHHHHHHHhcC--CeEEeeCCCCEEEEEeCCHHHHHHHHHHHHHhCCCC
Confidence 444555577888888888885 5776 68999999999964 68999999854
No 17
>PRK09358 adenosine deaminase; Provisional
Probab=46.10 E-value=13 Score=39.03 Aligned_cols=28 Identities=14% Similarity=0.396 Sum_probs=24.2
Q ss_pred ccceeeccccccccccCHHHHHHHHHHH
Q 007460 389 YNVRKVDTHVHHSACMNQKHLLRFIKSK 416 (603)
Q Consensus 389 YNvrKVDthVH~SacMnqKhLL~FIk~K 416 (603)
-+.-|||.|+|+.||+....|++..++.
T Consensus 8 ~~lpK~eLH~Hl~Gs~~~~~l~~l~~~~ 35 (340)
T PRK09358 8 RSLPKAELHLHLDGSLRPETILELARRN 35 (340)
T ss_pred hcCCceeEEecccCCCCHHHHHHHHHHc
Confidence 3577999999999999999998877665
No 18
>PRK13361 molybdenum cofactor biosynthesis protein A; Provisional
Probab=42.08 E-value=1.7e+02 Score=30.97 Aligned_cols=113 Identities=17% Similarity=0.304 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHhccCCC--ceEEccCCccccHHHHHH---hCCCCCCcccccccccccCCCccccccccccCCCCCchhH
Q 007460 406 QKHLLRFIKSKLRKEPD--EVVIFRDGTYLTLKEVFE---SLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSR 480 (603)
Q Consensus 406 qKhLL~FIk~Kl~~epd--~vV~~~dGk~~TLkevFe---~l~lt~~dLtVD~Ldvhad~~tFhRFD~Fn~KyNP~G~s~ 480 (603)
.++|.++|+. ++..+. .+...-+|..++ +..+ ..|++...+++|+++ ..+ |++.. .
T Consensus 75 r~dl~~li~~-i~~~~~l~~i~itTNG~ll~--~~~~~L~~aGl~~v~ISlDs~~----~e~---~~~i~----~----- 135 (329)
T PRK13361 75 RRGCDQLVAR-LGKLPGLEELSLTTNGSRLA--RFAAELADAGLKRLNISLDTLR----PEL---FAALT----R----- 135 (329)
T ss_pred cccHHHHHHH-HHhCCCCceEEEEeChhHHH--HHHHHHHHcCCCeEEEEeccCC----HHH---hhhhc----C-----
Confidence 4566666654 334444 454556776443 3333 346665567777765 111 12111 0
Q ss_pred HHHhhcccCCCCchhHHHHHHHHHHHHhhhcccceeEEEEEE-ecCChhHHHHHHHHHHHCCCCCCCceEEEEec
Q 007460 481 LREIFLKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISI-YGRKQSEWDQLASWIVNNELYSENVVWLIQVW 554 (603)
Q Consensus 481 LReiFLktDN~i~GrYlAEL~K~Vi~~LE~sKYQ~aE~RlSI-YGrs~~EW~kLA~Wv~~~~L~S~nnRWlIQIP 554 (603)
.|. |.++++ .|+.+.+..+....+...+ -|.+.+|+..++.|+.+.|+ .++++-.+|
T Consensus 136 ------------~g~-~~~vl~-~i~~~~~~Gi~~v~in~v~~~g~N~~ei~~~~~~~~~~gi---~~~~ie~mP 193 (329)
T PRK13361 136 ------------NGR-LERVIA-GIDAAKAAGFERIKLNAVILRGQNDDEVLDLVEFCRERGL---DIAFIEEMP 193 (329)
T ss_pred ------------CCC-HHHHHH-HHHHHHHcCCCceEEEEEEECCCCHHHHHHHHHHHHhcCC---eEEEEeccc
Confidence 111 334333 3344444444334444333 47899999999999999886 355544455
No 19
>KOG4741 consensus Uncharacterized conserved protein [Function unknown]
Probab=36.72 E-value=25 Score=34.92 Aligned_cols=62 Identities=23% Similarity=0.281 Sum_probs=46.9
Q ss_pred ccCCccccHHHHHHhCCCCCCcccccccccccCCCccccccccccCCCCCchhHHHHhhcccCCCC
Q 007460 427 FRDGTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLI 492 (603)
Q Consensus 427 ~~dGk~~TLkevFe~l~lt~~dLtVD~Ldvhad~~tFhRFD~Fn~KyNP~G~s~LReiFLktDN~i 492 (603)
.++|.++++++|-+.++....+-+.+.+.-+-++..+..|=+ ..|+..+++.+-|.|-+|||
T Consensus 86 ~~ngrpl~~r~v~Ei~~t~l~e~~~~~Itq~eHP~Lg~pyy~----LHPC~Tse~mke~~k~sNyi 147 (173)
T KOG4741|consen 86 CRNGRPLRVRQVAEILGTKLEENDAIVITQSEHPTLGIPYYK----LHPCDTSELMKEIPKRSNYI 147 (173)
T ss_pred hcCCCchhhhhhHHhhcCccccCccceeeeccCCcccceeee----ecCCcHHHHHhhcCCchHHH
Confidence 378999999999999887666556666665555555554533 33999999999999999875
No 20
>COG1908 FrhD Coenzyme F420-reducing hydrogenase, delta subunit [Energy production and conversion]
Probab=29.64 E-value=75 Score=30.51 Aligned_cols=41 Identities=24% Similarity=0.373 Sum_probs=28.7
Q ss_pred CCchhHHH----HHHHHHHHH--hhhcccceeEEEEEEecCChhHHHHHHHHHH
Q 007460 491 LIQGRFLA----ELTKQVFSD--LEASKYQMAEYRISIYGRKQSEWDQLASWIV 538 (603)
Q Consensus 491 ~i~GrYlA----EL~K~Vi~~--LE~sKYQ~aE~RlSIYGrs~~EW~kLA~Wv~ 538 (603)
|+.|.|.| |++|+++.+ +|....++.+ .|.+||+|+++-+.
T Consensus 69 y~~GN~ka~rR~~~lke~l~elgie~eRv~~~w-------iSa~E~ekf~e~~~ 115 (132)
T COG1908 69 YISGNYKAKRRMELLKELLKELGIEPERVRVLW-------ISAAEGEKFAETIN 115 (132)
T ss_pred eeccchHHHHHHHHHHHHHHHhCCCcceEEEEE-------EehhhHHHHHHHHH
Confidence 56677776 457777777 5555565555 45699999998765
No 21
>CHL00082 psbZ photosystem II protein Z
Probab=29.53 E-value=45 Score=28.33 Aligned_cols=19 Identities=32% Similarity=0.420 Sum_probs=16.3
Q ss_pred hhHHHHHHHHhhhhHHHHH
Q 007460 4 YTLHLAMAALVGASVVAVS 22 (603)
Q Consensus 4 ~~l~lAmAALvGAS~~A~s 22 (603)
...|+|++|||..||+.+-
T Consensus 3 i~fQl~v~aLi~~Sf~LVV 21 (62)
T CHL00082 3 IAFQLAVFALIATSFLLVI 21 (62)
T ss_pred eHHHHHHHHHHHHHHHHHh
Confidence 4689999999999998764
No 22
>PRK10219 DNA-binding transcriptional regulator SoxS; Provisional
Probab=28.14 E-value=57 Score=28.46 Aligned_cols=34 Identities=12% Similarity=0.240 Sum_probs=21.9
Q ss_pred cCHHHHHHHHHHHhccCCCceEEccCCccccHHHHHHhCCCC
Q 007460 404 MNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLKEVFESLDLT 445 (603)
Q Consensus 404 MnqKhLL~FIk~Kl~~epd~vV~~~dGk~~TLkevFe~l~lt 445 (603)
|.+..+++=+..-++.++++ .+|+.+|.+.+|++
T Consensus 1 ~~~~~~~~~~~~~i~~~~~~--------~~~~~~lA~~~~~S 34 (107)
T PRK10219 1 MSHQKIIQTLIAWIDEHIDQ--------PLNIDVVAKKSGYS 34 (107)
T ss_pred CchHHHHHHHHHHHHHhcCC--------CCCHHHHHHHHCCC
Confidence 45556666666666655433 35888888887775
No 23
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=26.41 E-value=94 Score=32.59 Aligned_cols=52 Identities=27% Similarity=0.344 Sum_probs=36.4
Q ss_pred ccccccccc-----CHHHHHHHHHHHhccCCCceEEc--cCCcc--c-cHHHHHHhCCCCCC
Q 007460 396 THVHHSACM-----NQKHLLRFIKSKLRKEPDEVVIF--RDGTY--L-TLKEVFESLDLTGY 447 (603)
Q Consensus 396 thVH~SacM-----nqKhLL~FIk~Kl~~epd~vV~~--~dGk~--~-TLkevFe~l~lt~~ 447 (603)
-+++|+.|- .-.+.|+=|++-|..+|++||++ .+.-. . .+..+|+.-++..+
T Consensus 63 ~~lcH~~~~~~~~~~~~d~L~~i~~fL~~nP~EvV~l~l~~~~~~~~~~~~~~~~~~gl~~~ 124 (270)
T cd08588 63 LRLCHSVCGLGDGGPLSDVLREVVDFLDANPNEVVTLFLEDYVSPGPLLRSKLFRVAGLTDL 124 (270)
T ss_pred EEEECCCccccCCccHHHHHHHHHHHHHhCCCcEEEEEEEeCCCcchHHHHHHhhhcCccce
Confidence 356677664 57888899999999999999985 33222 1 36777775555543
No 24
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=25.10 E-value=89 Score=23.93 Aligned_cols=26 Identities=27% Similarity=0.600 Sum_probs=20.4
Q ss_pred cccccccCHHHHHHHHHHHhccCCCceEE
Q 007460 398 VHHSACMNQKHLLRFIKSKLRKEPDEVVI 426 (603)
Q Consensus 398 VH~SacMnqKhLL~FIk~Kl~~epd~vV~ 426 (603)
++.||..++.+|++||..- .|..+|.
T Consensus 12 ~~fSgHad~~~L~~~i~~~---~p~~vil 37 (43)
T PF07521_consen 12 IDFSGHADREELLEFIEQL---NPRKVIL 37 (43)
T ss_dssp SGCSSS-BHHHHHHHHHHH---CSSEEEE
T ss_pred EeecCCCCHHHHHHHHHhc---CCCEEEE
Confidence 5699999999999999987 5665554
No 25
>KOG4068 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.81 E-value=1.4e+02 Score=29.97 Aligned_cols=44 Identities=27% Similarity=0.577 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhhhcccceeE------EEEEEecCChhHHHHH-HHHHHHCCCC
Q 007460 498 AELTKQVFSDLEASKYQMAE------YRISIYGRKQSEWDQL-ASWIVNNELY 543 (603)
Q Consensus 498 AEL~K~Vi~~LE~sKYQ~aE------~RlSIYGrs~~EW~kL-A~Wv~~~~L~ 543 (603)
-+.|.+|+++|++.+- +| -|.-||=++++||.++ -.|+.+.|-.
T Consensus 68 ~~~i~~Il~~l~k~g~--~e~~Dk~rt~f~I~Wrs~dewgnmIyqW~~dsg~~ 118 (174)
T KOG4068|consen 68 QEFIDEILEELEKKGL--AEPTDKRRTRFFIYWRSLDEWGNMIYQWVSDSGQL 118 (174)
T ss_pred HHHHHHHHHHHHHccC--CcccccCceEEEEEEcCHHHHHHHHHHHHHHcCcC
Confidence 3667777777877653 33 3678999999999885 6899998865
No 26
>PF07304 SRA1: Steroid receptor RNA activator (SRA1); InterPro: IPR009917 This entry consists of several hypothetical mammalian steroid receptor RNA activator proteins. The SRA-RNAs encode stable proteins that are widely expressed and upregulated in breast cancer cell lines. SRA-RNA is a steroid receptor co-activator which acts as a functional RNA. This domain is also found at the C terminus of Sec31, a component of the coat protein complex II (COPII, which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). COPII has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. ; PDB: 2YRU_A.
Probab=23.85 E-value=1.6e+02 Score=28.66 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=27.5
Q ss_pred ChHHHHHHHHHHHHHHhccchhh---HHHHHHHHHHHHHH
Q 007460 330 DATTFFTDLHHILRVIALGNMRT---LCHHRLLLLEQKFN 366 (603)
Q Consensus 330 ~~~eF~~D~~~l~~~i~~gp~ks---fc~rRL~~Le~KF~ 366 (603)
.+++++..++.++..+...--+. =|.|||++|+.+++
T Consensus 43 ~i~~~~~~L~~v~~~~~~~~~kr~~~D~~KRL~iLfd~ln 82 (157)
T PF07304_consen 43 PIEEVLRELQRVLEACPPSIKKRVVDDIEKRLNILFDHLN 82 (157)
T ss_dssp -HHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcccccchhHHHHHHHHHHHHHHHHh
Confidence 46777788888888776544443 48999999999887
No 27
>PRK02576 psbZ photosystem II reaction center protein Z; Provisional
Probab=22.19 E-value=75 Score=27.07 Aligned_cols=19 Identities=42% Similarity=0.385 Sum_probs=16.2
Q ss_pred hhHHHHHHHHhhhhHHHHH
Q 007460 4 YTLHLAMAALVGASVVAVS 22 (603)
Q Consensus 4 ~~l~lAmAALvGAS~~A~s 22 (603)
-..|+|+.||+..|++.+-
T Consensus 3 i~fQl~v~aLi~~SfiLVV 21 (62)
T PRK02576 3 ILFQLALLALVVMSFVLVV 21 (62)
T ss_pred eHHHHHHHHHHHHHHHHHh
Confidence 3689999999999998764
No 28
>TIGR03043 PS_II_psbZ photosystem II core protein PsbZ. PsbZ is a core protein of photosystem II in thylakoid-containing Cyanobacteria and plant chloroplasts. The original Chlamydomonas gene symbol, ycf9, is a synonym. PsbZ controls the interaction of the reaction center core with the light-harvesting antenna.
Probab=21.33 E-value=72 Score=26.81 Aligned_cols=18 Identities=44% Similarity=0.381 Sum_probs=15.2
Q ss_pred hHHHHHHHHhhhhHHHHH
Q 007460 5 TLHLAMAALVGASVVAVS 22 (603)
Q Consensus 5 ~l~lAmAALvGAS~~A~s 22 (603)
..|+|++||+-.|++.+-
T Consensus 1 ~fQl~v~aLi~~Sf~LVV 18 (58)
T TIGR03043 1 IFQLAVLALVLLSFVLVV 18 (58)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 369999999999998764
No 29
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]
Probab=20.30 E-value=1e+02 Score=34.52 Aligned_cols=99 Identities=13% Similarity=0.028 Sum_probs=63.8
Q ss_pred CchhHHHHHHHHHHHHhhhcccceeEEE-E-----EEecCChhHHH------HHHHHHHHCCCCCCCceEEEEeccchhh
Q 007460 492 IQGRFLAELTKQVFSDLEASKYQMAEYR-I-----SIYGRKQSEWD------QLASWIVNNELYSENVVWLIQVWISMFL 559 (603)
Q Consensus 492 i~GrYlAEL~K~Vi~~LE~sKYQ~aE~R-l-----SIYGrs~~EW~------kLA~Wv~~~~L~S~nnRWlIQIPRly~~ 559 (603)
+.-.=|..++-+.+++..+...+++|+| . ++-|.-.-||. -+-+-...++ -..|-+.++=|-...
T Consensus 114 ~~~~~~~~~~y~~~eef~~dgVvY~E~Rt~~p~l~~~~G~~t~e~~v~~~~~~~e~~~~~fp---I~sklI~~~~R~~~~ 190 (399)
T KOG1097|consen 114 IYAPAFRDYAYEALEEFAEDGVVYLEVRTYPPQLYTADGDITPEDVVAIVIAALEKAKRDFP---IKSKLIMCCIRHMPP 190 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHcCceEEEEEccCchhhhcCCCCCHHHHHHHHHHHHHHHHHhCC---CcceEEEeeccCCCh
Confidence 3556677888899999999999999999 3 45563333432 2334445666 345666677675533
Q ss_pred ccccccccccccccHHHHhhhccccccc-------cCc----hhhHHHHHhhh
Q 007460 560 KSHHRCYEMLVMQNFSFWIKCNVCFPLL-------SHL----YMHVCAHVCAY 601 (603)
Q Consensus 560 ~~~~~~~~~g~~~nF~~~l~~NIF~PLf-------~~~----~~~~~~~~~~~ 601 (603)
. ...+++++....|.+.|.| .+| .++-|+.|.|+
T Consensus 191 e--------~~~e~v~~~~~~~~~~~~~VvGidL~G~e~~~~p~~~f~~vl~~ 235 (399)
T KOG1097|consen 191 E--------VAEETVSEAKELNKLFPNFVVGIDLVGQEDLGGPLSLFLEVLAK 235 (399)
T ss_pred H--------HHHHHHHHHHHHHHhCCCeEEEEecCCCCCCCCChhhhHHHHHh
Confidence 1 2346666666668888988 455 45556666654
Done!